Pregenerated sensors for BTBD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003344Ensembl transcript IDs: ENSMUST00000003434.14, ENSMUST00000126980.8, ENSMUST00000131876.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGGAACCACGGCCACATGTCACCTACCCTGGGGCAGAGCTCCCAGTaGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGC | + |
Preference number: 1 (lower is better) Translates to: RNHGHMSPTLGQSSQ*LCVHAQQARASGGS Trigger: GCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGTGGCCGTGGTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 90 bp | GGTGGCCTAGAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTaGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGTGCCCAGTGC | + |
Preference number: 1 (lower is better) Translates to: GGLEGQGCGMYRGVL*YPRRATSGQLGAQC Trigger: GCACTGGGCACCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTCTAGGCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 90 bp | TCTCAACGGGGCCCAGCCCATGGCCTAACCACCTCCTCAGTGCCTTaGGACAGGCGGTCACACTTGTCACTGTGGACACAGGCAGCCCCT | + |
Preference number: 1 (lower is better) Translates to: SQRGPAHGLTTSSVP*DRRSHLSLWTQAAP Trigger: AGGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGGTTAGGCCATGGGCTGGGCCCCGTTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR TCA 90 bp | CGGGCTCCAGCTGAGTGTGGGCTTGTATGCATTGCAGTGTGCAGTTaGAGAGAACGGAGGAGCAGGGCAGCACCAGGGCTCGGAGCTGGC | + |
Preference number: 1 (lower is better) Translates to: RAPAECGLVCIAVCS*RERRSRAAPGLGAG Trigger: GCCAGCTCCGAGCCCTGGTGCTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACTCAGCTGGAGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR GCA 90 bp | GGGTGTTCTGTGGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGTaGCCAGTGCATTTTGATGGGTCTGCAGGCTCAAGGCTGAGCTCT | + |
Preference number: 1 (lower is better) Translates to: GCSVVPPESHIRPAG*PVHFDGSAGSRLSS Trigger: AGAGCTCAGCCTTGAGCCTGCAGACCCATCAAAATGCACTGGGCACCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCACAGAACACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR TCA 90 bp | CAGCTGGGTGCCCAGTGCATTTTGATGGGTCTGCAGGCTCAAGGCTaGGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGT | + |
Preference number: 1 (lower is better) Translates to: QLGAQCILMGLQAQG*ALLSTPVRSLSALG Trigger: ACCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGAGCCTGCAGACCCATCAAAATGCACTGGGCACCCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 90 bp | AAACTGGAGACTGCGCCTTCTGGGACATCACTGGATGGGGTGATGTaGTGGCCTAGAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCT | + |
Preference number: 1 (lower is better) Translates to: KLETAPSGTSLDGVM*WPRGPGLWYVQGCS Trigger: AGAACACCCCTGTACATACCACAGCCCTGGCCCTCTAGGCCACCACATCACCCCATCCAGTGATGTCCCAGAAGGCGCAGTCTCCAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 90 bp | GCACACCTCCCATGGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTaGTACAGAAATATGAGGAAGTGGAACCCCAAACTGGAGACTGCG | + |
Preference number: 1 (lower is better) Translates to: AHLPWLWDGFWAGGH*YRNMRKWNPKLETA Trigger: CGCAGTCTCCAGTTTGGGGTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCATGGGAGGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR TCA 90 bp | GGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATaGGGAAGTGGAACCCCAAACTGGAGACTGCGCCTTCTGGGACAT | + |
Preference number: 1 (lower is better) Translates to: GFGMGSGQEVTGTEI*GSGTPNWRLRLLGH Trigger: ATGTCCCAGAAGGCGCAGTCTCCAGTTTGGGGTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | CCAGGGCTTCAGGGGGCAGCAGTGCACGCAGGTCAGGACCTGGGACCTCCCAGGACCAGGGCTCGGAGCTaGCCTGCTGCCCTGAGCTTC | + |
Preference number: 2 (lower is better) Translates to: PGLQGAAVHAGQDLGPPRTRARS*PAALSF Trigger: GAAGCTCAGGGCAGCAGGCCAGCTCCGAGCCCTGGT...CCTGGGAGGTCCCAGGTCCTGACCTGCGTGCACTGCTGCCCCCTGAAGCCCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | AGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCGCTGGCCTGCTGCCCTaGGCTTCAGGGACTGCGACC | + |
Preference number: 2 (lower is better) Translates to: SSQWLCVHAQQARASGGSAGLLP*ASGTAT Trigger: GGTCGCAGTCCCTGAAGCTCAGGGCAGCAGGCCAGC...GCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCACTGGGAGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | GTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCAGTGCACGGCTGGCCTGCTGCCCTaGGCTTCAGGGACTGCGACC | + |
Preference number: 2 (lower is better) Translates to: VALCTCPAGQGFRGQQCTAGLLP*ASGTAT Trigger: GGTCGCAGTCCCTGAAGCTCAGGGCAGCAGGCCAGC...CGTGCACTGCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | GGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACACCAGGGCTCGGAGCTaGCCTGCTGCCCTGAGCTTC | + |
Preference number: 2 (lower is better) Translates to: GPGLWYVQGCSVVPPESHTRARS*PAALSF Trigger: GAAGCTCAGGGCAGCAGGCCAGCTCCGAGCCCTGGT...GTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | GTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCACGCAGGTCAGGACCTaGGACCTCCCAGGGAGCAGC | + |
Preference number: 2 (lower is better) Translates to: VTYPGAELPVALCTCPAGTQVRT*DLPGSS Trigger: GCTGCTCCCTGGGAGGTCCCAGGTCCTGACCTGCGT...GCCTGCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CAA 90 bp | GTCTCAACGGGGCCCAGCCCATGGCCTAACCACCTCCTCAGTGCCTaGGGACAGGCGGTCACACTTGTCACTGTGGACACAGGCAGCCCC | + |
Preference number: 2 (lower is better) Translates to: VSTGPSPWPNHLLSA*GQAVTLVTVDTGSP Trigger: GGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGGTTAGGCCATGGGCTGGGCCCCGTTGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR GCA 90 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCTCGGAGCTGGCCTGCTaGCCTGAGCTTCAGGGACTG | + |
Preference number: 2 (lower is better) Translates to: EGQGCGMYRGVLWYPRRASELAC*PELQGL Trigger: CAGTCCCTGAAGCTCAGGGCAGCAGGCCAGCTCCGA...GGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CAA 90 bp | GGAGAGGCCCGGCGCGGGCTCCAGCTGAGTGTGGGCTTGTATGCATaGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCACCAG | + |
Preference number: 2 (lower is better) Translates to: GEARRGLQLSVGLYA*QCAVEENGGAGQHQ Trigger: CTGGTGCTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACTCAGCTGGAGCCCGCGCCGGGCCTCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | GCCCTGAGCTTCAGGGACTGCGACCCACCACGCTCTGTCCATCCAAGGCTAGTCACGGGGCCCAGCCCATaGCCTAACCACCTCCTCAGT | + |
Preference number: 2 (lower is better) Translates to: ALSFRDCDPPRSVHPRLVTGPSP*PNHLLS Trigger: ACTGAGGAGGTGGTTAGGCCATGGGCTGGGCCCCGT...GACTAGCCTTGGATGGACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | TATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGACGCAGGTCAGGACCTaGGACCTCCCAGGGAGCAGC | + |
Preference number: 2 (lower is better) Translates to: YVQGCSVVPPESHIRPAGTQVRT*DLPGSS Trigger: GCTGCTCCCTGGGAGGTCCCAGGTCCTGACCTGCGT...CCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACATGTCACCTACCCTaGGGCAGAGCTCCCAGTGGC | + |
Preference number: 2 (lower is better) Translates to: EGQGCGMYRGVLWYPRRATCHLP*GRAPSG Trigger: GCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGT...GGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR GCA 90 bp | GGCTCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGCTGAGCTTCAGGGACTaGGACCCACCACGCTCTGTC | + |
Preference number: 2 (lower is better) Translates to: GSRLSSAEHTCEESVRLGLSFRD*DPPRSV Trigger: GACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAG...CCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR GCA 90 bp | ACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCTCGGAGCTGGCCTGCTaGCCTGAGCTTCAGGGACTG | + |
Preference number: 2 (lower is better) Translates to: TCHLPWGRAPSGSVYMPSSELAC*PELQGL Trigger: CAGTCCCTGAAGCTCAGGGCAGCAGGCCAGCTCCGA...GCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | ACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCACGGGGCCCAGCCCATaGCCTAACCACCTCCTCAGT | + |
Preference number: 2 (lower is better) Translates to: TCHLPWGRAPSGSVYMPSTGPSP*PNHLLS Trigger: ACTGAGGAGGTGGTTAGGCCATGGGCTGGGCCCCGT...GCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | GGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACTCACACTTGTCACTGTaGACACAGGCAGCCCCTTCC | + |
Preference number: 2 (lower is better) Translates to: GPGLWYVQGCSVVPPESHSHLSL*TQAAPS Trigger: GGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGA...GTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | TCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGTGGGGGCAGAGCTCCCAGTaGCTCTGTGTACATGCCCAG | + |
Preference number: 2 (lower is better) Translates to: SRLSSAEHTCEESVRLGWGQSSQ*LCVHAQ Trigger: CTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCC...CCACCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | TCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGTGGACATGTCACCTACCCTaGGGCAGAGCTCCCAGTGGC | + |
Preference number: 2 (lower is better) Translates to: SRLSSAEHTCEESVRLGWTCHLP*GRAPSG Trigger: GCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGT...CCACCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | GGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACATTGCAGTGTGCAGTTaGAGAGAACGGAGGAGCAGG | + |
Preference number: 2 (lower is better) Translates to: GPGLWYVQGCSVVPPESHIAVCS*RERRSR Trigger: CCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAAT...GTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CAA 90 bp | CATGGCCTAACCACCTCCTCAGTGCCTTGGGACAGGCGGTCACACTaGTCACTGTGGACACAGGCAGCCCCTTCCATGATGATGTGGGAG | + |
Preference number: 2 (lower is better) Translates to: HGLTTSSVPWDRRSH*SLWTQAAPSMMMWE Trigger: CTCCCACATCATCATGGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGGTTAGGCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | GTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCAGTGCACGAGAAGAAAAGGAACATaGAACCCAGACCACTGGCTG | + |
Preference number: 2 (lower is better) Translates to: VALCTCPAGQGFRGQQCTRRKGT*NPDHWL Trigger: CAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCT...CGTGCACTGCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR GCA 90 bp | AGCGGAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGCTGAGCTTCAGGGACTaGGACCCACCACGCTCTGTC | + |
Preference number: 2 (lower is better) Translates to: SGEEKEHETQTTGWRRGPLSFRD*DPPRSV Trigger: GACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAG...CGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | ATGGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAACCCAGACCACTGGCTaGAGGAGAGGCCCGGCGCGG | + |
Preference number: 2 (lower is better) Translates to: MALGWVLGRRSLVQKYEETQTTG*RRGPAR Trigger: CCGCGCCGGGCCTCTCCTCCAGCCAGTGGTCTGGGT...TTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | TGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAACGGCGCGGGCTCCAGCTaGGTGTGGGCTTGTATGCAT | + |
Preference number: 2 (lower is better) Translates to: WDGFWAGGHWYRNMRKWNGAGSS*VWACMH Trigger: ATGCATACAAGCCCACACTCAGCTGGAGCCCGCGCC...GTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | GTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCCTTCCATGATGATGTaGGAGGTGGTGGGGAGGGAG | + |
Preference number: 2 (lower is better) Translates to: VGLYALQCAVEENGGAGQPSMMM*EVVGRE Trigger: CTCCCTCCCCACCACCTCCCACATCATCATGGAAGG...CTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | TTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAAGGCGCGGGCTCCAGCTaGGTGTGGGCTTGTATGCAT | + |
Preference number: 2 (lower is better) Translates to: LGWVLGRRSLVQKYEEVEGAGSS*VWACMH Trigger: ATGCATACAAGCCCACACTCAGCTGGAGCCCGCGCC...TTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | ATGGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAACTGCAGGCTCAAGGCTaGGCTCTGCTGAGCACACCT | + |
Preference number: 2 (lower is better) Translates to: MALGWVLGRRSLVQKYEELQAQG*ALLSTP Trigger: AGGTGTGCTCAGCAGAGCTCAGCCTTGAGCCTGCAG...TTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | TGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAACACCTCCTCAGTGCCTTaGGACAGGCGGTCACACTTG | + |
Preference number: 2 (lower is better) Translates to: WDGFWAGGHWYRNMRKWNTSSVP*DRRSHL Trigger: CAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGT...GTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | TTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAACCTTCCATGATGATGTaGGAGGTGGTGGGGAGGGAG | + |
Preference number: 2 (lower is better) Translates to: LGWVLGRRSLVQKYEEVEPSMMM*EVVGRE Trigger: CTCCCTCCCCACCACCTCCCACATCATCATGGAAGG...TTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | TTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAAGTGCCCAGTGCATTTTaGTGGGTCTGCAGGCTCAAG | + |
Preference number: 2 (lower is better) Translates to: LGWVLGRRSLVQKYEEVEVPSAF*WVCRLK Trigger: CTTGAGCCTGCAGACCCATCAAAATGCACTGGGCAC...TTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CCA 90 bp | TTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAATCACACTTGTCACTGTaGACACAGGCAGCCCCTTCC | + |
Preference number: 2 (lower is better) Translates to: LGWVLGRRSLVQKYEEVESHLSL*TQAAPS Trigger: GGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGA...TTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR TCA 90 bp | ATGGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAAGAAGAAAAGGAACATaGAACCCAGACCACTGGCTG | + |
Preference number: 2 (lower is better) Translates to: MALGWVLGRRSLVQKYEERRKGT*NPDHWL Trigger: CAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCT...TTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | AGAACGGAGGAGCAGGGCAGCACCAGGGCTCGGAGCTaGCCTGCTGCCCTGAGCTTCAGGGACTGCGACCCA | + |
Preference number: 3 (lower is better) Translates to: RTEEQGSTRARS*PAALSFRDCDP Trigger: TGGGTCGCAGTCCCTGAAGCTCAGGGCAGCAGGCCAGCTCCGAGCCCTGGTGCTGCCCTGCTCCTCCGTTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR GCA 72 bp | TACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATaGCCAGCAGGCCAGGGCTTCAGGGGGCAGCAGTGC | + |
Preference number: 3 (lower is better) Translates to: YPGAELPVALCT*PAGQGFRGQQC Trigger: GCACTGCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | GGCCACATGTCACCTACCCTGGGGCAGAGCTCCCAGTaGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCA | + |
Preference number: 3 (lower is better) Translates to: GHMSPTLGQSSQ*LCVHAQQARAS Trigger: TGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTaGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGT | + |
Preference number: 3 (lower is better) Translates to: EGQGCGMYRGVL*YPRRATSGQLG Trigger: ACCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR GCA 72 bp | GTGGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGTaGCCAGTGCATTTTGATGGGTCTGCAGGCTCAAGG | + |
Preference number: 3 (lower is better) Translates to: VVPPESHIRPAG*PVHFDGSAGSR Trigger: CCTTGAGCCTGCAGACCCATCAAAATGCACTGGGCACCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | GCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGTaGACAGTGCTGACTGGGCACTTGCGCTGCTGTGAG | + |
Preference number: 3 (lower is better) Translates to: AEHTCEESVRLG*TVLTGHLRCCE Trigger: CTCACAGCAGCGCAAGTGCCCAGTCAGCACTGTCCACCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR-3UTR CAA 90 bp | GGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACGGTGCCCAGTGCATTTaGATGGGTCTGCAGGCTCAA | + |
Preference number: 3 (lower is better) Translates to: GPGLWYVQGCSVVPPESHGAQCI*MGLQAQ Trigger: TTGAGCCTGCAGACCCATCAAAATGCACTGGGCACC...GTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR CCA 72 bp | GGAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTaGAGGAGAGGCCCGGCGCGGGCTCCAGCTGAGTGT | + |
Preference number: 3 (lower is better) Translates to: GEEKEHETQTTG*RRGPARAPAEC Trigger: ACACTCAGCTGGAGCCCGCGCCGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR CCA 72 bp | GGGGACACAGTGTGGAGGGCACACCTCCCATGGCTTTaGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGA | + |
Preference number: 3 (lower is better) Translates to: GDTVWRAHLPWL*DGFWAGGHWYR Trigger: TCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCATGGGAGGTGTGCCCTCCACACTGTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR-3UTR CAA 90 bp | TCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGTGGGACAGGCGGTCACACTaGTCACTGTGGACACAGGCA | + |
Preference number: 3 (lower is better) Translates to: SRLSSAEHTCEESVRLGWDRRSH*SLWTQA Trigger: TGCCTGTGTCCACAGTGACAAGTGTGACCGCCTGTC...CCACCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR-3UTR CAA 90 bp | TATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGGACAGGCGGTCACACTaGTCACTGTGGACACAGGCA | + |
Preference number: 3 (lower is better) Translates to: YVQGCSVVPPESHIRPAGDRRSH*SLWTQA Trigger: TGCCTGTGTCCACAGTGACAAGTGTGACCGCCTGTC...CCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR-3UTR CAA 90 bp | GTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCCATTGCAGTGTGCAGTaGAAGAGAACGGAGGAGCAG | + |
Preference number: 3 (lower is better) Translates to: VTYPGAELPVALCTCPAGHCSVQ*KRTEEQ Trigger: CTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATG...GCCTGCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CAA 90 bp | AGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCGTGGGCTTGTATGCATaGCAGTGTGCAGTTGAAGAG | + |
Preference number: 3 (lower is better) Translates to: SSQWLCVHAQQARASGGSVGLYA*QCAVEE Trigger: CTCTTCAACTGCACACTGCAATGCATACAAGCCCAC...GCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCACTGGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR-3UTR CAA 90 bp | GGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACCAGCTGAGTGTGGGCTaGTATGCATTGCAGTGTGCA | + |
Preference number: 3 (lower is better) Translates to: GPGLWYVQGCSVVPPESHQLSVG*YALQCA Trigger: TGCACACTGCAATGCATACAAGCCCACACTCAGCTG...GTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR TCA 72 bp | TGGGTGGACAGTGCTGACTGGGCACTTGCGCTGCTGTaGGAAGTAGGAACCACGGCCACATGTCACCTACCC | + |
Preference number: 3 (lower is better) Translates to: WVDSADWALALL*EVGTTATCHLP Trigger: GGGTAGGTGACATGTGGCCGTGGTTCCTACTTCTCACAGCAGCGCAAGTGCCCAGTCAGCACTGTCCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR TCA 72 bp | CCTGTGAGGAGTCTGTCCGCCTTGGGTGGACAGTGCTaGCTGGGCACTTGCGCTGCTGTGAGAAGTAGGAAC | + |
Preference number: 3 (lower is better) Translates to: PVRSLSALGGQC*LGTCAAVRSRN Trigger: GTTCCTACTTCTCACAGCAGCGCAAGTGCCCAGTCAGCACTGTCCACCCAAGGCGGACAGACTCCTCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | TCATTTGGGGACACAGTGTGGAGGGCACACCTCCCATaGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTGG | + |
Preference number: 3 (lower is better) Translates to: SFGDTVWRAHLP*LWDGFWAGGHW Trigger: CCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCATGGGAGGTGTGCCCTCCACACTGTGTCCCCAAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR-3UTR CAA 90 bp | AGCGGAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGCACCTCCTCAGTGCCTaGGGACAGGCGGTCACACTT | + |
Preference number: 3 (lower is better) Translates to: SGEEKEHETQTTGWRRGPHLLSA*GQAVTL Trigger: AAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTG...CGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
||
3UTR TCA 72 bp | GCCCAGTGCATTTTGATGGGTCTGCAGGCTCAAGGCTaGGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCC | + |
Preference number: 3 (lower is better) Translates to: AQCILMGLQAQG*ALLSTPVRSLS Trigger: GGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGAGCCTGCAGACCCATCAAAATGCACTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | TCAGTGCCTTGGGACAGGCGGTCACACTTGTCACTGTaGACACAGGCAGCCCCTTCCATGATGATGTGGGAG | + |
Preference number: 3 (lower is better) Translates to: SVPWDRRSHLSL*TQAAPSMMMWE Trigger: CTCCCACATCATCATGGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CAA 90 bp | CTGAGTGTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCACACCTCCTCAGTGCCTaGGGACAGGCGGTCACACTT | + |
Preference number: 3 (lower is better) Translates to: LSVGLYALQCAVEENGGAHLLSA*GQAVTL Trigger: AAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTG...TGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | TGGAGGGCACACCTCCCATGGCTTTGGGATGGGTTCTaGGCAGGAGGTCACTGGTACAGAAATATGAGGAAG | + |
Preference number: 3 (lower is better) Translates to: WRAHLPWLWDGF*AGGHWYRNMRK Trigger: CTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCATGGGAGGTGTGCCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | TGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTaGAACCCCAAACTGGAGACTGCGCCTTCTGGGACA | + |
Preference number: 3 (lower is better) Translates to: WAGGHWYRNMRK*NPKLETAPSGT Trigger: TGTCCCAGAAGGCGCAGTCTCCAGTTTGGGGTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR TCA 72 bp | ATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATaGGGAAGTGGAACCCCAAACTGGAGACTGCGCCTT | + |
Preference number: 3 (lower is better) Translates to: MGSGQEVTGTEI*GSGTPNWRLRL Trigger: AAGGCGCAGTCTCCAGTTTGGGGTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR GCA 72 bp | CAGAAATATGAGGAAGTGGAACCCCAAACTGGAGACTaGGCCTTCTGGGACATCACTGGATGGGGTGATGTG | + |
Preference number: 3 (lower is better) Translates to: QKYEEVEPQTGD*AFWDITGWGDV Trigger: CACATCACCCCATCCAGTGATGTCCCAGAAGGCGCAGTCTCCAGTTTGGGGTTCCACTTCCTCATATTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CCA 72 bp | CCATGGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTaGTACAGAAATATGAGGAAGTGGAACCCCAAACTG | + |
Preference number: 3 (lower is better) Translates to: PWLWDGFWAGGH*YRNMRKWNPKL Trigger: CAGTTTGGGGTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR-3UTR CAA 90 bp | ATGGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGGCTTGTATGCATaGCAGTGTGCAGTTGAAGAG | + |
Preference number: 3 (lower is better) Translates to: MALGWVLGRRSLVQKYEEVGLYA*QCAVEE Trigger: CTCTTCAACTGCACACTGCAATGCATACAAGCCCAC...TTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCAGTGCACGGTCCACCAGGATGCCTaGCTGTGCCGGGCCTGCGGC | + |
Preference number: 4 (lower is better) Translates to: VALCTCPAGQGFRGQQCTVHQDA*LCRACG Trigger: GCCGCAGGCCCGGCACAGTCAGGCATCCTGGTGGAC...CGTGCACTGCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | AGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCAAGACGCGCGCCCGCTaGCGCCCGCCGCCATCTTGT | + |
Preference number: 4 (lower is better) Translates to: SSQWLCVHAQQARASGGSKTRAR*RPPPSC Trigger: ACAAGATGGCGGCGGGCGGCAGCGGGCGCGCGTCTT...GCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCACTGGGAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003434.14 |
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CDS-3UTR CCA 90 bp | AGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCGCACCGTGGGCTTGGTaGCCTGCCAGTTGTACACGG | + |
Preference number: 4 (lower is better) Translates to: SSQWLCVHAQQARASGGSAPWAW*PASCTR Trigger: CCGTGTACAACTGGCAGGCCACCAAGCCCACGGTGC...GCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCACTGGGAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGGCGCGTCCACCAGGATGCCTaGCTGTGCCGGGCCTGCGGC | + |
Preference number: 4 (lower is better) Translates to: EKKRNMKPRPLAGGEARRVHQDA*LCRACG Trigger: GCCGCAGGCCCGGCACAGTCAGGCATCCTGGTGGAC...GCGCCGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CCAGGGCTTCAGGGGGCAGCAGTGCACGCAGGTCAGGACCTGGGACCTCCCAGGCATCCTCCACAGATGTaGCGTTGTTGTTCCCAGCCG | + |
Preference number: 4 (lower is better) Translates to: PGLQGAAVHAGQDLGPPRHPPQM*RCCSQP Trigger: CGGCTGGGAACAACAACGGCACATCTGTGGAGGATG...CCTGGGAGGTCCCAGGTCCTGACCTGCGTGCACTGCTGCCCCCTGAAGCCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | GGCTCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGAGCGCTCCTGCACCGTaGGCTTGGTGGCCTGCCAGT | + |
Preference number: 4 (lower is better) Translates to: GSRLSSAEHTCEESVRLGSAPAP*AWWPAS Trigger: ACTGGCAGGCCACCAAGCCCACGGTGCAGGAGCGCT...CCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCAGGAACTCCACACAGTaGGCCTCGAGCGCGGGCACT | + |
Preference number: 4 (lower is better) Translates to: EGQGCGMYRGVLWYPRRARNSTQ*ASSAGT Trigger: AGTGCCCGCGCTCGAGGCCCACTGTGTGGAGTTCCT...GGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GCAGCGGAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCGGACGCGCTGCGAGCTaGGCCCCTTGCCCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: AAEKKRNMKPRPLAGGEAGRAAS*APCPPG Trigger: TCCTGGTGGGCAAGGGGCTCAGCTCGCAGCGCGTCC...GGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTCCGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | CAGGCGGTCACACTTGTCACTGTGGACACAGGCAGCCCCTTCCATGATGATGTGGGACGCGCTGCGAGCTaGGCCCCTTGCCCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: QAVTLVTVDTGSPFHDDVGRAAS*APCPPG Trigger: TCCTGGTGGGCAAGGGGCTCAGCTCGCAGCGCGTCC...CACATCATCATGGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGAAGGCGAAGCGCTCCTaGACCGTGGGCTTGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: HMSPTLGQSSQWLCVHAQKAKRS*TVGLVA Trigger: GGCCACCAAGCCCACGGTGCAGGAGCGCTTCGCCTT...CTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCTTGCCCACCAGGAAGTaGACGTCGCACAGCACCTCG | + |
Preference number: 4 (lower is better) Translates to: EGQGCGMYRGVLWYPRRALPTRK*TSHSTS Trigger: CGAGGTGCTGTGCGACGTGCACTTCCTGGTGGGCAA...GGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CCAGGGCTTCAGGGGGCAGCAGTGCACGCAGGTCAGGACCTGGGACCTCCCAGGTGCGTAGACCTTTGGTaGCATAGTGAGAGTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: PGLQGAAVHAGQDLGPPRCVDLW*HSESLG Trigger: GCCCAGACTCTCACTATGGCACCAAAGGTCTACGCA...CCTGGGAGGTCCCAGGTCCTGACCTGCGTGCACTGCTGCCCCCTGAAGCCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | CTGGCCTGCTGCCCTGAGCTTCAGGGACTGCGACCCACCACGCTCTGTCCATCCGCCATAGTGAGAGTCTaGGCCCTTCAGCGTGGCACA | + |
Preference number: 4 (lower is better) Translates to: LACCPELQGLRPTTLCPSAIVRV*ALQRGT Trigger: TGTGCCACGCTGAAGGGCCCAGACTCTCACTATGGC...GGATGGACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAGGGCAGCAGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GCAGCGGAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCACCGGGGCCGGTCGATaGACTCCACACGCGGCTTGG | + |
Preference number: 4 (lower is better) Translates to: AAEKKRNMKPRPLAGGEATGAGR*TPHAAW Trigger: CCAAGCCGCGTGTGGAGTTCATCGACCGGCCCCGGT...GGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTCCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | CCTGAGCTTCAGGGACTGCGACCCACCACGCTCTGTCCATCCAAGGCTAGTCCCCCTGCACCGTGGGCTTaGTGGCCTGCCAGTTGTACA | + |
Preference number: 4 (lower is better) Translates to: PELQGLRPTTLCPSKASPPAPWA*WPASCT Trigger: TGTACAACTGGCAGGCCACCAAGCCCACGGTGCAGG...GGGACTAGCCTTGGATGGACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GGCTCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGCTGAGTACAGGAACTTaGGCAGCGCCAGGAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: GSRLSSAEHTCEESVRLGLSTGT*AAPGRQ Trigger: CTGCCTTCCTGGCGCTGCTCAAGTTCCTGTACTCAG...CCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | TGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCACCGGGGCCGGTCGATaGACTCCACACGCGGCTTGG | + |
Preference number: 4 (lower is better) Translates to: WACMHCSVQLKRTEEQGSTGAGR*TPHAAW Trigger: CCAAGCCGCGTGTGGAGTTCATCGACCGGCCCCGGT...GCTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GCCCTGAGCTTCAGGGACTGCGACCCACCACGCTCTGTCCATCCAAGGCTAGTCCAGAACCGTCGCAGCTaGAACCTGTGTCGTTCTGGC | + |
Preference number: 4 (lower is better) Translates to: ALSFRDCDPPRSVHPRLVQNRRS*NLCRSG Trigger: GCCAGAACGACACAGGTTTCAGCTGCGACGGTTCTG...GACTAGCCTTGGATGGACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | TCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGTGGTTGCCCACCAGGAAGTaGACGTCGCACAGCACCTCG | + |
Preference number: 4 (lower is better) Translates to: SRLSSAEHTCEESVRLGWLPTRK*TSHSTS Trigger: CGAGGTGCTGTGCGACGTGCACTTCCTGGTGGGCAA...CCACCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCTCGAGCGCGGGCACTaGGTACTTCTTGGCCGTGTA | + |
Preference number: 4 (lower is better) Translates to: HMSPTLGQSSQWLCVHAQLERGH*VLLGRV Trigger: TACACGGCCAAGAAGTACGCAGTGCCCGCGCTCGAG...CTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | GTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCCCGGTCCACCAGGATaGCTGACTGTGCCGGGCCTG | + |
Preference number: 4 (lower is better) Translates to: VGLYALQCAVEENGGAGQPGPPG*LTVPGL Trigger: CAGGCCCGGCACAGTCAGGCATCCTGGTGGACCGGG...CTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | TGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCCCCGGTCCACCAGGATaGCTGACTGTGCCGGGCCTG | + |
Preference number: 4 (lower is better) Translates to: WACMHCSVQLKRTEEQGSPGPPG*LTVPGL Trigger: CAGGCCCGGCACAGTCAGGCATCCTGGTGGACCGGG...GCTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | GAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGGCGCAGGAACTCCACACAGTaGGCCTCGAGCGCGGGCACT | + |
Preference number: 4 (lower is better) Translates to: EKKRNMKPRPLAGGEARRRNSTQ*ASSAGT Trigger: AGTGCCCGCGCTCGAGGCCCACTGTGTGGAGTTCCT...GCGCCGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | CCTGAGCTTCAGGGACTGCGACCCACCACGCTCTGTCCATCCAAGGCTAGTCCCGCCATAGTGAGAGTCTaGGCCCTTCAGCGTGGCACA | + |
Preference number: 4 (lower is better) Translates to: PELQGLRPTTLCPSKASPAIVRV*ALQRGT Trigger: TGTGCCACGCTGAAGGGCCCAGACTCTCACTATGGC...GGGACTAGCCTTGGATGGACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | GGCTCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGGTGGTGGGAGACTCGTaGGTCACCTTGCGTAGACCT | + |
Preference number: 4 (lower is better) Translates to: GSRLSSAEHTCEESVRLGVVGDS*VTLRRP Trigger: AGGTCTACGCAAGGTGACCCACGAGTCTCCCACCAC...CCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | CCTGAGCTTCAGGGACTGCGACCCACCACGCTCTGTCCATCCAAGGCTAGTCCCGTGGTGGGAGACTCGTaGGTCACCTTGCGTAGACCT | + |
Preference number: 4 (lower is better) Translates to: PELQGLRPTTLCPSKASPVVGDS*VTLRRP Trigger: AGGTCTACGCAAGGTGACCCACGAGTCTCCCACCAC...GGGACTAGCCTTGGATGGACAGAGCGTGGTGGGTCGCAGTCCCTGAAGCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CAA 72 bp | GGAGAGGCCCGGCGCGGGCTCCAGCTGAGTGTGGGCTaGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGA | + |
Preference number: 4 (lower is better) Translates to: GEARRGLQLSVG*YALQCAVEENG Trigger: TCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACTCAGCTGGAGCCCGCGCCGGGCCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CAA 72 bp | TGGGGACACAGTGTGGAGGGCACACCTCCCATGGCTTaGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAG | + |
Preference number: 4 (lower is better) Translates to: WGHSVEGTPPMA*GWVLGRRSLVQ Trigger: CTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCATGGGAGGTGTGCCCTCCACACTGTGTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | GTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCACTCGTGGGTCACCTTaGGTAGACCTTTGGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: VTYPGAELPVALCTCPAGTRGSP*VDLWCH Trigger: ATGGCACCAAAGGTCTACGCAAGGTGACCCACGAGT...GCCTGCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | GTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCAGTGCACGCCTTGCGTAGACCTTTaGTGCCATAGTGAGAGTCTG | + |
Preference number: 4 (lower is better) Translates to: VALCTCPAGQGFRGQQCTPCVDL*CHSESL Trigger: CAGACTCTCACTATGGCACCAAAGGTCTACGCAAGG...CGTGCACTGCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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3UTR CAA 72 bp | ACCACCTCCTCAGTGCCTTGGGACAGGCGGTCACACTaGTCACTGTGGACACAGGCAGCCCCTTCCATGATG | + |
Preference number: 4 (lower is better) Translates to: TTSSVPWDRRSH*SLWTQAAPSMM Trigger: CATCATGGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGGCGCAATGTAGGAAGAGGCTaGCCACCTCCCGGTCCACCA | + |
Preference number: 4 (lower is better) Translates to: EKKRNMKPRPLAGGEARRNVGRG*PPPGPP Trigger: TGGTGGACCGGGAGGTGGTCAGCCTCTTCCTACATT...GCGCCGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | GTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGATCCCGCTCCAGCACTaGCACCAGCGTGTCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: VGLYALQCAVEENGGAGQIPLQH*HQRVQV Trigger: GACCTGGACACGCTGGTGGCAGTGCTGGAGCGGGAT...CTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CCACCTCCTCAGTGCCTTGGGACAGGCGGTCACACTTGTCACTGTGGACACAGGCATCCTCCACAGATGTaGCGTTGTTGTTCCCAGCCG | + |
Preference number: 4 (lower is better) Translates to: PPPQCLGTGGHTCHCGHRHPPQM*RCCSQP Trigger: CGGCTGGGAACAACAACGGCACATCTGTGGAGGATG...CCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | TGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCGCACCGTGGGCTTGGTaGCCTGCCAGTTGTACACGG | + |
Preference number: 4 (lower is better) Translates to: WACMHCSVQLKRTEEQGSAPWAW*PASCTR Trigger: CCGTGTACAACTGGCAGGCCACCAAGCCCACGGTGC...GCTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | CCACCTCCTCAGTGCCTTGGGACAGGCGGTCACACTTGTCACTGTGGACACAGGTGGCCGTGTACAGTGTaGTCATCACTGTCTCTGGCC | + |
Preference number: 4 (lower is better) Translates to: PPPQCLGTGGHTCHCGHRWPCTV*SSLSLA Trigger: GGCCAGAGACAGTGATGACCACACTGTACACGGCCA...CCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | TATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGTGGCCGTGTACAGTGTaGTCATCACTGTCTCTGGCC | + |
Preference number: 4 (lower is better) Translates to: YVQGCSVVPPESHIRPAGWPCTV*SSLSLA Trigger: GGCCAGAGACAGTGATGACCACACTGTACACGGCCA...CCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | CCACCTCCTCAGTGCCTTGGGACAGGCGGTCACACTTGTCACTGTGGACACAGGCGGCAAACTCCTCGATaGTCATCAGGGGGAATCGGA | + |
Preference number: 4 (lower is better) Translates to: PPPQCLGTGGHTCHCGHRRQTPR*SSGGIG Trigger: TCCGATTCCCCCTGATGACCATCGAGGAGTTTGCCG...CCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | ACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCCGGCTCTCCACCTGCTaGAACCGGTTAATGCTACAC | + |
Preference number: 4 (lower is better) Translates to: TCHLPWGRAPSGSVYMPSRLSTC*NRLMLH Trigger: GTGTAGCATTAACCGGTTCCAGCAGGTGGAGAGCCG...GCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCCCTTGCGTAGACCTTTaGTGCCATAGTGAGAGTCTG | + |
Preference number: 4 (lower is better) Translates to: EGQGCGMYRGVLWYPRRAPCVDL*CHSESL Trigger: CAGACTCTCACTATGGCACCAAAGGTCTACGCAAGG...GGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | AGCGGAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGAATGTAGGAAGAGGCTaGCCACCTCCCGGTCCACCA | + |
Preference number: 4 (lower is better) Translates to: SGEEKEHETQTTGWRRGPNVGRG*PPPGPP Trigger: TGGTGGACCGGGAGGTGGTCAGCCTCTTCCTACATT...CGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | TGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCCTCGAGCGCGGGCACTaGGTACTTCTTGGCCGTGTA | + |
Preference number: 4 (lower is better) Translates to: WACMHCSVQLKRTEEQGSLERGH*VLLGRV Trigger: TACACGGCCAAGAAGTACGCAGTGCCCGCGCTCGAG...GCTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | AGTGTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGATCCCGCTCCAGCACTaGCACCAGCGTGTCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: SVGLYALQCAVEENGGAGIPLQH*HQRVQV Trigger: GACCTGGACACGCTGGTGGCAGTGCTGGAGCGGGAT...CCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGTGCGTAGACCTTTGGTaGCATAGTGAGAGTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: HMSPTLGQSSQWLCVHAQCVDLW*HSESLG Trigger: GCCCAGACTCTCACTATGGCACCAAAGGTCTACGCA...CTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | ACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCACTCGTGGGTCACCTTaGGTAGACCTTTGGTGCCAT | + |
Preference number: 4 (lower is better) Translates to: TCHLPWGRAPSGSVYMPSTRGSP*VDLWCH Trigger: ATGGCACCAAAGGTCTACGCAAGGTGACCCACGAGT...GCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | TGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCCCTGCACCGTGGGCTTaGTGGCCTGCCAGTTGTACA | + |
Preference number: 4 (lower is better) Translates to: WACMHCSVQLKRTEEQGSPAPWA*WPASCT Trigger: TGTACAACTGGCAGGCCACCAAGCCCACGGTGCAGG...GCTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | AGTGTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCACAGGCTGGCCAGCTaGGGCTCATCGAAGAGCCGT | + |
Preference number: 4 (lower is better) Translates to: SVGLYALQCAVEENGGAGHRLAS*GSSKSR Trigger: ACGGCTCTTCGATGAGCCCCAGCTGGCCAGCCTGTG...CCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | GAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGGCGCCGGCTCTCCACCTGCTaGAACCGGTTAATGCTACAC | + |
Preference number: 4 (lower is better) Translates to: EKKRNMKPRPLAGGEARRRLSTC*NRLMLH Trigger: GTGTAGCATTAACCGGTTCCAGCAGGTGGAGAGCCG...GCGCCGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | GTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCAGCAGAACCGTCGCAGCTaGAACCTGTGTCGTTCTGGC | + |
Preference number: 4 (lower is better) Translates to: VGLYALQCAVEENGGAGQQNRRS*NLCRSG Trigger: GCCAGAACGACACAGGTTTCAGCTGCGACGGTTCTG...CTGCCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | TTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAAAAGGCGAAGCGCTCCTaGACCGTGGGCTTGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: LGWVLGRRSLVQKYEEVEKAKRS*TVGLVA Trigger: GGCCACCAAGCCCACGGTGCAGGAGCGCTTCGCCTT...TTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | TGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAACCACAGGCTGGCCAGCTaGGGCTCATCGAAGAGCCGT | + |
Preference number: 4 (lower is better) Translates to: WDGFWAGGHWYRNMRKWNHRLAS*GSSKSR Trigger: ACGGCTCTTCGATGAGCCCCAGCTGGCCAGCCTGTG...GTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CCA 90 bp | CAGGCGGTCACACTTGTCACTGTGGACACAGGCAGCCCCTTCCATGATGATGTGCGGCAAACTCCTCGATaGTCATCAGGGGGAATCGGA | + |
Preference number: 4 (lower is better) Translates to: QAVTLVTVDTGSPFHDDVRQTPR*SSGGIG Trigger: TCCGATTCCCCCTGATGACCATCGAGGAGTTTGCCG...CACATCATCATGGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | TGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAACCCAGGTCAATGTCAGTaGAGCCCTCGGCAGCAATGG | + |
Preference number: 4 (lower is better) Translates to: WDGFWAGGHWYRNMRKWNPGQCQ*SPRQQW Trigger: CCATTGCTGCCGAGGGCTTCACTGACATTGACCTGG...GTTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CAGGCGGTCACACTTGTCACTGTGGACACAGGCAGCCCCTTCCATGATGATGTGATGACTTCAGGGATCTaGCCATCCTCCACAGATGTG | + |
Preference number: 4 (lower is better) Translates to: QAVTLVTVDTGSPFHDDVMTSGI*PSSTDV Trigger: CACATCTGTGGAGGATGGGCAGATCCCTGAAGTCAT...CACATCATCATGGAAGGGGCTGCCTGTGTCCACAGTGACAAGTGTGACCGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR TCA 90 bp | TTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAACTGAGTACAGGAACTTaGGCAGCGCCAGGAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: LGWVLGRRSLVQKYEEVELSTGT*AAPGRQ Trigger: CTGCCTTCCTGGCGCTGCTCAAGTTCCTGTACTCAG...TTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | CTGAGTGTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCATTGTCAGCCCGCAGGTaGTTCTTCAGGAACTCCACA | + |
Preference number: 4 (lower is better) Translates to: LSVGLYALQCAVEENGGALSARR*FFRNST Trigger: TGTGGAGTTCCTGAAGAAGCACCTGCGGGCTGACAA...TGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR GCA 90 bp | TTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAGTGGAAATGACTTCAGGGATCTaGCCATCCTCCACAGATGTG | + |
Preference number: 4 (lower is better) Translates to: LGWVLGRRSLVQKYEEVEMTSGI*PSSTDV Trigger: CACATCTGTGGAGGATGGGCAGATCCCTGAAGTCAT...TTCCACTTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS CCA 90 bp | CTTGGTGGCCTGCCAGTTGTACACGGGCTCGCGCAGCAGCGCGCCTaGGCCCGCGTCGTCGCGCTCGTCGCCCACGGCCTGCGCGTCAGT | + |
Preference number: 5 (lower is better) Translates to: LGGLPVVHGLAQQRA*ARVVALVAHGLRVS Trigger: ACTGACGCGCAGGCCGTGGGCGACGAGCGCGACGACGCGGGCCCAGGCGCGCTGCTGCGCGAGCCCGTGTACAACTGGCAGGCCACCAAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS GCA 90 bp | ACAGCGCTTCCCACAGCTAGCACAAACCTGTGCGCGGGGACGCGCTaGGAGCTGAGCCCCTTGCCCACCAGGAAGTGCACGTCGCACAGC | + |
Preference number: 5 (lower is better) Translates to: TALPTASTNLCAGTR*ELSPLPTRKCTSHS Trigger: GCTGTGCGACGTGCACTTCCTGGTGGGCAAGGGGCTCAGCTCGCAGCGCGTCCCCGCGCACAGGTTTGTGCTAGCTGTGGGAAGCGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS TCA 90 bp | TTCCCACAGCTAGCACAAACCTGTGCGCGGGGACGCGCTGCGAGCTaGGCCCCTTGCCCACCAGGAAGTGCACGTCGCACAGCACCTCGT | + |
Preference number: 5 (lower is better) Translates to: FPQLAQTCARGRAAS*APCPPGSARRTAPR Trigger: ACGAGGTGCTGTGCGACGTGCACTTCCTGGTGGGCAAGGGGCTCAGCTCGCAGCGCGTCCCCGCGCACAGGTTTGTGCTAGCTGTGGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | CCAGGGCTTCAGGGGGCAGCAGTGCACGCAGGTCAGGACCTGGGACCTCCCAGGAGCAGCATGAAGGCATaGTCAGCCCGCAGGTGCTTC | + |
Preference number: 5 (lower is better) Translates to: PGLQGAAVHAGQDLGPPRSSMKA*SARRCF Trigger: GAAGCACCTGCGGGCTGACAATGCCTTCATGCTGCT...CCTGGGAGGTCCCAGGTCCTGACCTGCGTGCACTGCTGCCCCCTGAAGCCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | CCAGGGCTTCAGGGGGCAGCAGTGCACGCAGGTCAGGACCTGGGACCTCCCAGGGACTCGTGGGTCACCTaGCGTAGACCTTTGGTGCCA | + |
Preference number: 5 (lower is better) Translates to: PGLQGAAVHAGQDLGPPRDSWVT*RRPLVP Trigger: TGGCACCAAAGGTCTACGCAAGGTGACCCACGAGTC...CCTGGGAGGTCCCAGGTCCTGACCTGCGTGCACTGCTGCCCCCTGAAGCCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | GGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACTCCTGCACCGTGGGCTaGGTGGCCTGCCAGTTGTAC | + |
Preference number: 5 (lower is better) Translates to: GPGLWYVQGCSVVPPESHSCTVG*VACQLY Trigger: GTACAACTGGCAGGCCACCAAGCCCACGGTGCAGGA...GTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS GCA 90 bp | CCCCCGTGGTGGGAGACTCGTGGGTCACCTTGCGTAGACCTTTGGTaGCATAGTGAGAGTCTGGGCCCTTCAGCGTGGCACAGGCGGTGT | + |
Preference number: 5 (lower is better) Translates to: PPWWETRGSPCVDLW*HSESLGPSAWHRRC Trigger: ACACCGCCTGTGCCACGCTGAAGGGCCCAGACTCTCACTATGGCACCAAAGGTCTACGCAAGGTGACCCACGAGTCTCCCACCACGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | CACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGTGCGAGCTGAGCCCCTaGCCCACCAGGAAGTGCACG | + |
Preference number: 5 (lower is better) Translates to: HMSPTLGQSSQWLCVHAQCELSP*PTRKCT Trigger: CGTGCACTTCCTGGTGGGCAAGGGGCTCAGCTCGCA...CTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | GTGGCTCTGTGTACATGCCCAGCAGGCCAGGGCTTCAGGGGGCAGCAGTGCACGCTGAAGCTGCTGCCGTaGACACTCAGCCTCAGACCA | + |
Preference number: 5 (lower is better) Translates to: VALCTCPAGQGFRGQQCTLKLLP*TLSLRP Trigger: TGGTCTGAGGCTGAGTGTCAACGGCAGCAGCTTCAG...CGTGCACTGCTGCCCCCTGAAGCCCTGGCCTGCTGGGCATGTACACAGAGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS GCA 90 bp | AGCCGTGCCTGTGTGAGCAGCATGAAGGCATTGTCAGCCCGCAGGTaGTTCTTCAGGAACTCCACACAGTGGGCCTCGAGCGCGGGCACT | + |
Preference number: 5 (lower is better) Translates to: SRACVSSMKALSARR*FFRNSTQWASSAGT Trigger: AGTGCCCGCGCTCGAGGCCCACTGTGTGGAGTTCCTGAAGAAGCACCTGCGGGCTGACAATGCCTTCATGCTGCTCACACAGGCACGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS-3UTR CAA 90 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCATGAGACTCAGGGCCTaGCCCAGCACCTTCCTCTTG | + |
Preference number: 5 (lower is better) Translates to: EGQGCGMYRGVLWYPRRAMRLRA*PSTFLL Trigger: CAAGAGGAAGGTGCTGGGCAAGGCCCTGAGTCTCAT...GGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | GGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACTCTGAGTACAGGAACTaGAGCAGCGCCAGGAAGGCA | + |
Preference number: 5 (lower is better) Translates to: GPGLWYVQGCSVVPPESHSEYRN*SSARKA Trigger: TGCCTTCCTGGCGCTGCTCAAGTTCCTGTACTCAGA...GTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | GTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGCAGGCTCTGAGTACAGGAACTaGAGCAGCGCCAGGAAGGCA | + |
Preference number: 5 (lower is better) Translates to: VTYPGAELPVALCTCPAGSEYRN*SSARKA Trigger: TGCCTTCCTGGCGCTGCTCAAGTTCCTGTACTCAGA...GCCTGCTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS GCA 90 bp | CTGAAGCTGCTGCCGTTGACACTCAGCCTCAGACCAGCGCACGACTaGATTGAAGAGCCGAACCTCACGAATGCCCAGGGTATCCCGCTC | + |
Preference number: 5 (lower is better) Translates to: LKLLPLTLSLRPAHD*IEEPNLTNAQGIPL Trigger: GAGCGGGATACCCTGGGCATTCGTGAGGTTCGGCTCTTCAATGCAGTCGTGCGCTGGTCTGAGGCTGAGTGTCAACGGCAGCAGCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS-3UTR CAA 90 bp | AGCGGAGAAGAAAAGGAACATGAAACCCAGACCACTGGCTGGAGGAGAGGCCCGTCCTGCACCGTGGGCTaGGTGGCCTGCCAGTTGTAC | + |
Preference number: 5 (lower is better) Translates to: SGEEKEHETQTTGWRRGPSCTVG*VACQLY Trigger: GTACAACTGGCAGGCCACCAAGCCCACGGTGCAGGA...CGGGCCTCTCCTCCAGCCAGTGGTCTGGGTTTCATGTTCCTTTTCTTCTCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | CCACCTCCTCAGTGCCTTGGGACAGGCGGTCACACTTGTCACTGTGGACACAGGAGCAGCATGAAGGCATaGTCAGCCCGCAGGTGCTTC | + |
Preference number: 5 (lower is better) Translates to: PPPQCLGTGGHTCHCGHRSSMKA*SARRCF Trigger: GAAGCACCTGCGGGCTGACAATGCCTTCATGCTGCT...CCTGTGTCCACAGTGACAAGTGTGACCGCCTGTCCCAAGGCACTGAGGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | GAGGGCCAGGGCTGTGGTATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCGATCTGGATGTTCACTaGGTAGTCAGTAGGCCCGTG | + |
Preference number: 5 (lower is better) Translates to: EGQGCGMYRGVLWYPRRADLDVH*VVSRPV Trigger: CACGGGCCTACTGACTACCAAGTGAACATCCAGATC...GGCTCTCCGGGGGTACCACAGAACACCCCTGTACATACCACAGCCCTGGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | CACATGTCACCTACCCTGGGGCAGAGCTCCCAGTGGCTCTGTGTACATGCCCAGGACTCGTGGGTCACCTaGCGTAGACCTTTGGTGCCA | + |
Preference number: 5 (lower is better) Translates to: HMSPTLGQSSQWLCVHAQDSWVT*RRPLVP Trigger: TGGCACCAAAGGTCTACGCAAGGTGACCCACGAGTC...CTGGGCATGTACACAGAGCCACTGGGAGCTCTGCCCCAGGGTAGGTGACATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS GCA 90 bp | GTGCTTCTTCAGGAACTCCACACAGTGGGCCTCGAGCGCGGGCACTaGGTACTTCTTGGCCGTGTACAGTGTGGTCATCACTGTCTCTGG | + |
Preference number: 5 (lower is better) Translates to: VLLQELHTVGLERGH*VLLGRVQCGHHCLW Trigger: CCAGAGACAGTGATGACCACACTGTACACGGCCAAGAAGTACGCAGTGCCCGCGCTCGAGGCCCACTGTGTGGAGTTCCTGAAGAAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CCA 90 bp | TCCGCTGTGTTCTTGTCTATACTCTCCAGGCACAGGCTGGCCAGCTaGGGCTCATCGAAGAGCCGTGCCTGTGTGAGCAGCATGAAGGCA | + |
Preference number: 5 (lower is better) Translates to: SAVFLSILSRHRLAS*GSSKSRACVSSMKA Trigger: TGCCTTCATGCTGCTCACACAGGCACGGCTCTTCGATGAGCCCCAGCTGGCCAGCCTGTGCCTGGAGAGTATAGACAAGAACACAGCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS-3UTR CAA 90 bp | GGCTCAAGGCTGAGCTCTGCTGAGCACACCTGTGAGGAGTCTGTCCGCCTTGGGGATCTGGATGTTCACTaGGTAGTCAGTAGGCCCGTG | + |
Preference number: 5 (lower is better) Translates to: GSRLSSAEHTCEESVRLGDLDVH*VVSRPV Trigger: CACGGGCCTACTGACTACCAAGTGAACATCCAGATC...CCCAAGGCGGACAGACTCCTCACAGGTGTGCTCAGCAGAGCTCAGCCTTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | CTGAGTGTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCATGCGAGCTGAGCCCCTaGCCCACCAGGAAGTGCACG | + |
Preference number: 5 (lower is better) Translates to: LSVGLYALQCAVEENGGACELSP*PTRKCT Trigger: CGTGCACTTCCTGGTGGGCAAGGGGCTCAGCTCGCA...TGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS CCA 90 bp | CGGAAGGTGCTGGCAGAACCGTCGCAGCTGAAACCTGTGTCGTTCTaGCCAAGGACTGTGTTGCTGTCCGTGTGGATGATCTGGATGTTC | + |
Preference number: 5 (lower is better) Translates to: RKVLAEPSQLKPVSF*PRTVLLSVWMIWMF Trigger: GAACATCCAGATCATCCACACGGACAGCAACACAGTCCTTGGCCAGAACGACACAGGTTTCAGCTGCGACGGTTCTGCCAGCACCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | TATGTACAGGGGTGTTCTGTGGTACCCCCGGAGAGCCACATCAGGCCAGCTGGGGTAGCCATCCCACCATaGAACATGGCGTCAAAGACA | + |
Preference number: 5 (lower is better) Translates to: YVQGCSVVPPESHIRPAGVAIPP*NMASKT Trigger: TGTCTTTGACGCCATGTTCAATGGTGGGATGGCTAC...CCCAGCTGGCCTGATGTGGCTCTCCGGGGGTACCACAGAACACCCCTGTACATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | AGTGTGGGCTTGTATGCATTGCAGTGTGCAGTTGAAGAGAACGGAGGAGCAGGGCTGAAGCTGCTGCCGTaGACACTCAGCCTCAGACCA | + |
Preference number: 5 (lower is better) Translates to: SVGLYALQCAVEENGGAGLKLLP*TLSLRP Trigger: TGGTCTGAGGCTGAGTGTCAACGGCAGCAGCTTCAG...CCCTGCTCCTCCGTTCTCTTCAACTGCACACTGCAATGCATACAAGCCCACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS-3UTR CAA 90 bp | ATGGCTTTGGGATGGGTTCTGGGCAGGAGGTCACTGGTACAGAAATATGAGGAAATGAGACTCAGGGCCTaGCCCAGCACCTTCCTCTTG | + |
Preference number: 5 (lower is better) Translates to: MALGWVLGRRSLVQKYEEMRLRA*PSTFLL Trigger: CAAGAGGAAGGTGCTGGGCAAGGCCCTGAGTCTCAT...TTCCTCATATTTCTGTACCAGTGACCTCCTGCCCAGAACCCATCCCAAAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS CAA 72 bp | AACCTGTGCGCGGGGACGCGCTGCGAGCTGAGCCCCTaGCCCACCAGGAAGTGCACGTCGCACAGCACCTCG | + |
Preference number: 6 (lower is better) Translates to: NLCAGTRCELSP*PTRKCTSHSTS Trigger: CGAGGTGCTGTGCGACGTGCACTTCCTGGTGGGCAAGGGGCTCAGCTCGCAGCGCGTCCCCGCGCACAGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS GCA 72 bp | CCCACAGCTAGCACAAACCTGTGCGCGGGGACGCGCTaGGAGCTGAGCCCCTTGCCCACCAGGAAGTGCACG | + |
Preference number: 6 (lower is better) Translates to: PTASTNLCAGTR*ELSPLPTRKCT Trigger: CGTGCACTTCCTGGTGGGCAAGGGGCTCAGCTCGCAGCGCGTCCCCGCGCACAGGTTTGTGCTAGCTGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS GCA 72 bp | TCAAAGACAGCGCTTCCCACAGCTAGCACAAACCTGTaGGCGGGGACGCGCTGCGAGCTGAGCCCCTTGCCC | + |
Preference number: 6 (lower is better) Translates to: SKTALPTASTNL*AGTRCELSPLP Trigger: GGGCAAGGGGCTCAGCTCGCAGCGCGTCCCCGCGCACAGGTTTGTGCTAGCTGTGGGAAGCGCTGTCTTTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS CAA 72 bp | CTCTCCACCTGCTGGAACCGGTTAATGCTACACTCCTaGCCCCGCAGGCAACACCGGGGCCGGTCGATGAAC | + |
Preference number: 6 (lower is better) Translates to: LSTCWNRLMLHS*PRRQHRGRSMN Trigger: GTTCATCGACCGGCCCCGGTGTTGCCTGCGGGGCAAGGAGTGTAGCATTAACCGGTTCCAGCAGGTGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CAA 90 bp | AGGAACTCCACACAGTGGGCCTCGAGCGCGGGCACTGCGTACTTCTaGGCCGTGTACAGTGTGGTCATCACTGTCTCTGGCCCGATCTGC | + |
Preference number: 6 (lower is better) Translates to: RNSTQWASSAGTAYF*AVYSVVITVSGPIC Trigger: GCAGATCGGGCCAGAGACAGTGATGACCACACTGTACACGGCCAAGAAGTACGCAGTGCCCGCGCTCGAGGCCCACTGTGTGGAGTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS GCA 72 bp | CAGGAACTCCACACAGTGGGCCTCGAGCGCGGGCACTaGGTACTTCTTGGCCGTGTACAGTGTGGTCATCAC | + |
Preference number: 6 (lower is better) Translates to: QELHTVGLERGH*VLLGRVQCGHH Trigger: GTGATGACCACACTGTACACGGCCAAGAAGTACGCAGTGCCCGCGCTCGAGGCCCACTGTGTGGAGTTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CAA 72 bp | ACACAGTGGGCCTCGAGCGCGGGCACTGCGTACTTCTaGGCCGTGTACAGTGTGGTCATCACTGTCTCTGGC | + |
Preference number: 6 (lower is better) Translates to: TQWASSAGTAYF*AVYSVVITVSG Trigger: GCCAGAGACAGTGATGACCACACTGTACACGGCCAAGAAGTACGCAGTGCCCGCGCTCGAGGCCCACTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS GCA 72 bp | AACCTCACGAATGCCCAGGGTATCCCGCTCCAGCACTaGCACCAGCGTGTCCAGGTCAATGTCAGTGAAGCC | + |
Preference number: 6 (lower is better) Translates to: NLTNAQGIPLQH*HQRVQVNVSEA Trigger: GGCTTCACTGACATTGACCTGGACACGCTGGTGGCAGTGCTGGAGCGGGATACCCTGGGCATTCGTGAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CAA 90 bp | TCAATGTCAGTGAAGCCCTCGGCAGCAATGGCGTCCGCTGTGTTCTaGTCTATACTCTCCAGGCACAGGCTGGCCAGCTGGGGCTCATCG | + |
Preference number: 6 (lower is better) Translates to: SMSVKPSAAMASAVF*SILSRHRLASWGSS Trigger: CGATGAGCCCCAGCTGGCCAGCCTGTGCCTGGAGAGTATAGACAAGAACACAGCGGACGCCATTGCTGCCGAGGGCTTCACTGACATTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CAA 90 bp | CAGCACCTTCCTCTTGTTCTCGGGTGTCACCTGAAGCTGCTGCCGTaGACACTCAGCCTCAGACCAGCGCACGACTGCATTGAAGAGCCG | + |
Preference number: 6 (lower is better) Translates to: QHLPLVLGCHLKLLP*TLSLRPAHDCIEEP Trigger: CGGCTCTTCAATGCAGTCGTGCGCTGGTCTGAGGCTGAGTGTCAACGGCAGCAGCTTCAGGTGACACCCGAGAACAAGAGGAAGGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CAA 72 bp | CCTCTTGTTCTCGGGTGTCACCTGAAGCTGCTGCCGTaGACACTCAGCCTCAGACCAGCGCACGACTGCATT | + |
Preference number: 6 (lower is better) Translates to: PLVLGCHLKLLP*TLSLRPAHDCI Trigger: AATGCAGTCGTGCGCTGGTCTGAGGCTGAGTGTCAACGGCAGCAGCTTCAGGTGACACCCGAGAACAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CAA 72 bp | ATGGTCATCAGGGGGAATCGGATGAGACTCAGGGCCTaGCCCAGCACCTTCCTCTTGTTCTCGGGTGTCACC | + |
Preference number: 6 (lower is better) Translates to: MVIRGNRMRLRA*PSTFLLFSGVT Trigger: GGTGACACCCGAGAACAAGAGGAAGGTGCTGGGCAAGGCCCTGAGTCTCATCCGATTCCCCCTGATGACCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS TCA 72 bp | GGTCATCACTGTCTCTGGCCCGATCTGCACTTCATCTaGGTACAGGAACTTGAGCAGCGCCAGGAAGGCAGC | + |
Preference number: 6 (lower is better) Translates to: GHHCLWPDLHFI*VQELEQRQEGS Trigger: GCTGCCTTCCTGGCGCTGCTCAAGTTCCTGTACTCAGATGAAGTGCAGATCGGGCCAGAGACAGTGATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 ENSMUST00000131876.2 |
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CDS CCA 72 bp | CTGGCAGAACCGTCGCAGCTGAAACCTGTGTCGTTCTaGCCAAGGACTGTGTTGCTGTCCGTGTGGATGATC | + |
Preference number: 6 (lower is better) Translates to: LAEPSQLKPVSF*PRTVLLSVWMI Trigger: GATCATCCACACGGACAGCAACACAGTCCTTGGCCAGAACGACACAGGTTTCAGCTGCGACGGTTCTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |
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CDS CAA 72 bp | CAGCTGAAACCTGTGTCGTTCTGGCCAAGGACTGTGTaGCTGTCCGTGTGGATGATCTGGATGTTCACTTGG | + |
Preference number: 6 (lower is better) Translates to: QLKPVSFWPRTV*LSVWMIWMFTW Trigger: CCAAGTGAACATCCAGATCATCCACACGGACAGCAACACAGTCCTTGGCCAGAACGACACAGGTTTCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003434.14 ENSMUST00000126980.8 |