Pregenerated sensors for BTBD18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000086598Ensembl transcript IDs: ENSMUST00000133437.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTTTTCCTTaGCTTCCCATACTGGCAGTGAGTAAGCCCCATAGGCTGGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: GRGSNIFLASVAAFP*LPILAVSKPHRLGL Trigger: TAAGCCCAGCCTATGGGGCTTACTCACTGCCAGTATGGGAAGTCAAGGAAAAGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR TCA 90 bp | TTGAAGTTCCCTGAATTTTCAGTGACTATAAGATATCTCATGAATTaGGAGGCTACTCATAACTATCCTTATGACCTGAGTTGGGTACCA | + |
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Preference number: 1 (lower is better) Translates to: LKFPEFSVTIRYLMN*EATHNYPYDLSWVP Trigger: TGGTACCCAACTCAGGTCATAAGGATAGTTATGAGTAGCCTCTCAATTCATGAGATATCTTATAGTCACTGAAAATTCAGGGAACTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR GCA 90 bp | GGCTTCATTCCTTCTCAAACCTTCTTTGAATACAACCACAAACAGTaGTTGAAGTTCCCTGAATTTTCAGTGACTATAAGATATCTCATG | + |
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Preference number: 1 (lower is better) Translates to: GFIPSQTFFEYNHKQ*LKFPEFSVTIRYLM Trigger: CATGAGATATCTTATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGTTTGAGAAGGAATGAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR CAA 90 bp | TCAGTTCTGAGGAGGTGCTTGCTTTTCTGCCAAGAACGCCTTCTGTaGATGAACAGTTATCACCCTCCCAGGAACTCTAACCTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SVLRRCLLFCQERLL*MNSYHPPRNSNLPS Trigger: GGAGGGCAGGTTAGAGTTCCTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAGCACCTCCTCAGAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGCATGGTATTGCTGTTTaGCTTCTGCCTGGTGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVHGIAV*LLPGAE Trigger: TTCCGCACCAGGCAGAAGTCAAACAGCAATACCATG...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR-3UTR TCA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTGTGCTTGAAGTTCCCTaGATTTTCAGTGACTATAAG | + |
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Preference number: 2 (lower is better) Translates to: LLLRSGRGSNIFLASVAAVLEVP*IFSDYK Trigger: CTTATAGTCACTGAAAATTCAGGGAACTTCAAGCAC...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGTCAGTTCTGAGGAGGTaGTTGCTTTTCTGCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVSVLRR*LLFCQE Trigger: TTCTTGGCAGAAAAGCAAGCACCTCCTCAGAACTGA...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR-3UTR CAA 90 bp | TATTGCTGTTTGACTTCTGCCTGGTGCGGAAACCTGAGGAGGGGAGATCAGTTCCAAGAACGCCTTCTGTaGATGAACAGTTATCACCCT | + |
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Preference number: 3 (lower is better) Translates to: YCCLTSAWCGNLRRGDQFQERLL*MNSYHP Trigger: AGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTG...GAACTGATCTCCCCTCCTCAGGTTTCCGCACCAGGCAGAAGTCAAACAGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR GCA 72 bp | GAGGGGAGATCAGTTCTGAGGAGGTGCTTGCTTTTCTaGCAAGAACGCCTTCTGTTGATGAACAGTTATCAC | + |
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Preference number: 3 (lower is better) Translates to: EGRSVLRRCLLF*QERLLLMNSYH Trigger: GTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAGCACCTCCTCAGAACTGATCTCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR-3UTR CAA 90 bp | TACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATTTAGAGTTTCTAACCATGGTATaGCTGTTTGACTTCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: YRRLRQKSKFKASLGNLEFLTMV*LFDFCL Trigger: CAGGCAGAAGTCAAACAGCAATACCATGGTTAGAAA...CTCTAAATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR-3UTR CAA 90 bp | ACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATAACCACAAACAGTGCTaGAAGTTCCCTGAATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: TSYRRLRQKSKFKASLGNNHKQC*KFPEFS Trigger: TGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTT...ATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR TCA 72 bp | AGTAACATCTTTCTAGCTTCTGTGGCAGCTTTTCCTTaGCTTCCCATACTGGCAGTGAGTAAGCCCCATAGG | + |
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Preference number: 3 (lower is better) Translates to: SNIFLASVAAFP*LPILAVSKPHR Trigger: CCTATGGGGCTTACTCACTGCCAGTATGGGAAGTCAAGGAAAAGCTGCCACAGAAGCTAGAAAGATGTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR GCA 72 bp | CATAATTTTCTAACCATGGTATTGCTGTTTGACTTCTaGCTGGTGCGGAAACCTGAGGAGGGGAGATCAGTT | + |
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Preference number: 3 (lower is better) Translates to: HNFLTMVLLFDF*LVRKPEEGRSV Trigger: AACTGATCTCCCCTCCTCAGGTTTCCGCACCAGGCAGAAGTCAAACAGCAATACCATGGTTAGAAAATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGGATGCAGCAGTGGGCTaGGACAGCCTCACCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQDAAVG*DSLTLC Trigger: GCAGAGGGTGAGGCTGTCCCAGCCCACTGCTGCATC...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | ACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATGCCTCACCCTCTGCCTaGAGAAGGGCATCACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: TSYRRLRQKSKFKASLGNASPSA*RRASQN Trigger: GTTTTGTGATGCCCTTCTGCAGGCAGAGGGTGAGGC...ATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGTGCAGGCAGACAGGATaGAGCAGTGGGCTGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQCRQTG*SSGLGQ Trigger: CTGTCCCAGCCCACTGCTGCATCCTGTCTGCCTGCA...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTCACTCTGGCAGAGATTaGCGCAGCAGCCGGCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLLRSGRGSNIFLASVAAHSGRD*RSSRRL Trigger: CAACCGCCGGCTGCTGCGCCAATCTCTGCCAGAGTG...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGGACAGCCTCACCCTCTaGCTGCAGAAGGGCATCACA | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQDSLTL*LQKGIT Trigger: TGTGATGCCCTTCTGCAGGCAGAGGGTGAGGCTGTC...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | TACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATTTAGAGGACTTCACCATAGGGTaGTCTGGGGAGTGGCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: YRRLRQKSKFKASLGNLEDFTIG*SGEWLA Trigger: TGCTAGCCACTCCCCAGACCACCCTATGGTGAAGTC...CTCTAAATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGCGGATGGGTCTGGAGTaGTCTGTAGAGGACGGACTT | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQRMGLE*SVEDGL Trigger: AAGTCCGTCCTCTACAGAGCACTCCAGACCCATCCG...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTTTTGAGGGCGACTCTTaGGTCCCACCACTCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLRSGRGSNIFLASVAAFEGDS*VPPLWQ Trigger: CTGCCAGAGTGGTGGGACCCAAGAGTCGCCCTCAAA...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | ACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATCTCTGGCTTTCTTCTTaGGCTGAGTATCTGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: TSYRRLRQKSKFKASLGNLWLSS*AEYLTS Trigger: GCTTGTCAGATACTCAGCTCAAGAAGAAAGCCAGAG...ATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGGGACTTCAACCTCACTaGCCCAAGAGGACTAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQGLQPH*PKRTRS Trigger: ACTCCTAGTCCTCTTGGGGCAGTGAGGTTGAAGTCC...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | TGTAACACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGTTTACTCTTCCAACCTaGCCCTCCTCTACAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CNTSYRRLRQKSKFKASLFTLPT*PSSTEL Trigger: CAGCTCTGTAGAGGAGGGGCAGGTTGGAAGAGTAAA...CAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGTGTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | TATTGCTGTTTGACTTCTGCCTGGTGCGGAAACCTGAGGAGGGGAGATCAGTTCCTTGTGATTCGATACTaGTCAGCCTCACAAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YCCLTSAWCGNLRRGDQFLVIRY*SASQGW Trigger: CCAACCTTGTGAGGCTGAGCAGTATCGAATCACAAG...GAACTGATCTCCCCTCCTCAGGTTTCCGCACCAGGCAGAAGTCAAACAGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | TATTGCTGTTTGACTTCTGCCTGGTGCGGAAACCTGAGGAGGGGAGATCAGTTCTCCTGTACAGGATTTTaGAACTGGCAGGAGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: YCCLTSAWCGNLRRGDQFSCTGF*NWQEST Trigger: TGTGCTCTCCTGCCAGTTCCAAAATCCTGTACAGGA...GAACTGATCTCCCCTCCTCAGGTTTCCGCACCAGGCAGAAGTCAAACAGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGTCCCTGACCATCCAGTaGCTGGGAGCTGGTAATTTC | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQSLTIQ*LGAGNF Trigger: GAAATTACCAGCTCCCAGCCACTGGATGGTCAGGGA...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGTTACTTACAGTTCTCTaGCTCCAAAGACGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQLLTVL*LQRRRP Trigger: TGGCCGCCGTCTTTGGAGGCAGAGAACTGTAAGTAA...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | AGCCTGGGCAATTTAGAGATTCCACTCATTTCAGTGTTCTACTTAACATGGCTTTGGGTCCCACCACTCTaGCAGAGATTGGCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLGNLEIPLISVFYLTWLWVPPL*QRLAQQ Trigger: CTGCTGCGCCAATCTCTGCCAGAGTGGTGGGACCCA...AAGCCATGTTAAGTAGAACACTGAAATGAGTGGAATCTCTAAATTGCCCAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | ACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATATTCTTTCCTGTTTCTaGCAGGTGATAACTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TSYRRLRQKSKFKASLGNILSCF*QVITWG Trigger: ACCCCAAGTTATCACCTGTCAGAAACAGGAAAGAAT...ATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | TGTAACACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGTTAGGTCCTTCTCTCTaGCTTGATGGAGATGATCTG | + |
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Preference number: 4 (lower is better) Translates to: CNTSYRRLRQKSKFKASLLGPSL*LDGDDL Trigger: CAGATCATCTCCATCAAGCCAGAGAGAAGGACCTAA...CAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGTGTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTCTGTGGGCATTGAGCTaGGACCACTTAATATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLRSGRGSNIFLASVAALWALS*DHLICW Trigger: CCAGCATATTAAGTGGTCCCAGCTCAATGCCCACAG...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGAGATACTTCCATCTCTaGCGTATACAGGAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQRYFHL*RIQEVH Trigger: GTGGACTTCCTGTATACGTCAGAGATGGAAGTATCT...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | TGTAACACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGCTTTCTTCTTGAGCTaGGTATCTGACAAGCTATCT | + |
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Preference number: 4 (lower is better) Translates to: CNTSYRRLRQKSKFKASLAFFLS*VSDKLS Trigger: AGATAGCTTGTCAGATACTCAGCTCAAGAAGAAAGC...CAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGTGTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | AGCCTGGGCAATTTAGAGATTCCACTCATTTCAGTGTTCTACTTAACATGGCTTTTGAGCGGCTCAGCCTaGTCTTTCTGGGCAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SLGNLEIPLISVFYLTWLLSGSA*SFWATV Trigger: AACTGTTGCCCAGAAAGATCAGGCTGAGCCGCTCAA...AAGCCATGTTAAGTAGAACACTGAAATGAGTGGAATCTCTAAATTGCCCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | GGCAATTTAGAGATTCCACTCATTTCAGTGTTCTACTTAACATGGCTTCATTCCGAGAGCAGAATGTCTTaGAGCCTAGGGCTCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GNLEIPLISVFYLTWLHSESRMS*SLGLSG Trigger: CCCAGAGAGCCCTAGGCTTCAAGACATTCTGCTCTC...GGAATGAAGCCATGTTAAGTAGAACACTGAAATGAGTGGAATCTCTAAATTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | TACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATTTAGAGTTGATGGAGATGATCTaGTTTCTTGAGTCAGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: YRRLRQKSKFKASLGNLELMEMI*FLESGK Trigger: TTTGCCTGACTCAAGAAAGCAGATCATCTCCATCAA...CTCTAAATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | ATTCCTTCTCAAACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTCTGAGTTCAGGGCTCTaGTTCTTGTTCTCAGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: IPSQTFFEYNHKQCLKFPLSSGL*FLFSAG Trigger: GCCGGCTGAGAACAAGAAGCAGAGCCCTGAACTCAG...AGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGTTTGAGAAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTCAGTTCACTGGTAGCTaGAGCACTTGTGATTCGATA | + |
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Preference number: 4 (lower is better) Translates to: LLLRSGRGSNIFLASVAAQFTGS*STCDSI Trigger: TATCGAATCACAAGTGCTGCAGCTACCAGTGAACTG...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | TTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGACTCACCATAGGGTGGTCTaGGGAGTGGCTAGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: FFEYNHKQCLKFPEFSVTHHRVV*GVASRE Trigger: CTCTCTGCTAGCCACTCCCCAGACCACCCTATGGTG...AGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGAGAAGTTTTTCTCCCTaGCCATCCAGTGGCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVRSFSP*PSSGWE Trigger: CTCCCAGCCACTGGATGGTCAGGGAGAAAAACTTCT...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | CATAACTATCCTTATGACCTGAGTTGGGTACCACATAGTTTTGTCACTGAAAAATGTCTCTGCCCAGTCTaGGCATGGAGGAGAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: HNYPYDLSWVPHSFVTEKCLCPV*AWRREM Trigger: CATCTCTCTCCTCCATGCTCAGACTGGGCAGAGACA...TTTTTCAGTGACAAAACTATGTGGTACCCAACTCAGGTCATAAGGATAGTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | TTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGACTATAGCTCCAAGCGTTCTGTaGAGAAAGGACTGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FEYNHKQCLKFPEFSVTIAPSVL*RKDCRQ Trigger: CTGCCTGCAGTCCTTTCTTCACAGAACGCTTGGAGC...TATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | TTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGACTATAATCTGGGGGCTATCTTaGGTGTTTCTGAGGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FEYNHKQCLKFPEFSVTIIWGLS*VFLRGG Trigger: GCCTCCCCTCAGAAACACTCAAGATAGCCCCCAGAT...TATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | GGCAATTTAGAGATTCCACTCATTTCAGTGTTCTACTTAACATGGCTTCATTCCCTCTCTGGGGAGTCCTaGCACAGTTGTATTCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: GNLEIPLISVFYLTWLHSLSGES*HSCILA Trigger: TGCTAGAATACAACTGTGTCAGGACTCCCCAGAGAG...GGAATGAAGCCATGTTAAGTAGAACACTGAAATGAGTGGAATCTCTAAATTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTCAAGCTATCTGCATTTaGCAGGTTAGTCTTTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLLRSGRGSNIFLASVAAQAICI*QVSLFV Trigger: CACAAAAAGACTAACCTGCCAAATGCAGATAGCTTG...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | CATAACTATCCTTATGACCTGAGTTGGGTACCACATAGTTTTGTCACTGAAAAAAGGACGGACTTCCCCTaGTTTCTGCTTATCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: HNYPYDLSWVPHSFVTEKRTDFP*FLLIHT Trigger: GGTGTGGATAAGCAGAAACCAGGGGAAGTCCGTCCT...TTTTTCAGTGACAAAACTATGTGGTACCCAACTCAGGTCATAAGGATAGTTATG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | ATTCCTTCTCAAACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTCCAGAGTTCCATGTCTaGCAAACACCATTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPSQTFFEYNHKQCLKFPPEFHV*QTPFFP Trigger: GGGGAAGAATGGTGTTTGCCAGACATGGAACTCTGG...AGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGTTTGAGAAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGGATGATCTGCTTTCTTaGGTCAGGCAAACTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVDDLLS*VRQTLA Trigger: AGCCAGAGTTTGCCTGACTCAAGAAAGCAGATCATC...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | CATAACTATCCTTATGACCTGAGTTGGGTACCACATAGTTTTGTCACTGAAAAATATCTTGAGTGTTTCTaGGGGGAGGCTCCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: HNYPYDLSWVPHSFVTEKYLECF*GEAPVP Trigger: TGGTACAGGAGCCTCCCCTCAGAAACACTCAAGATA...TTTTTCAGTGACAAAACTATGTGGTACCCAACTCAGGTCATAAGGATAGTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | TTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGACTATACCTTTTCCAATCCTGTaGGGTCTCTGGGCCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FEYNHKQCLKFPEFSVTIPFPIL*GLWARV Trigger: AACTCTGGCCCAGAGACCTCACAGGATTGGAAAAGG...TATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGTTTCTGGGCAACAGTTaGTCATCCACAGAAGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVFLGNS*SSTEGY Trigger: GTACCCTTCTGTGGATGAGCAACTGTTGCCCAGAAA...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CCA 90 bp | TTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGACTATAAGAGGACTAGGAGTCTaGGTGACAGGCAGTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FEYNHKQCLKFPEFSVTIRGLGV*VTGSGV Trigger: AACTCCACTGCCTGTCACCCAGACTCCTAGTCCTCT...TATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | CATAACTATCCTTATGACCTGAGTTGGGTACCACATAGTTTTGTCACTGAAAAATTCCTGCTCATTAACTaGGGACAGCAGAGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNYPYDLSWVPHSFVTEKFLLIN*GQQSSR Trigger: TCTGGAACTCTGCTGTCCTCAGTTAATGAGCAGGAA...TTTTTCAGTGACAAAACTATGTGGTACCCAACTCAGGTCATAAGGATAGTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR TCA 90 bp | TTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGACTATAGCTAAGGGGCTCAAATaGTTCTGTGTTCTCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FEYNHKQCLKFPEFSVTIAKGLK*FCVLRA Trigger: CGCTCTGAGAACACAGAATCATTTGAGCCCCTTAGC...TATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | CATAACTATCCTTATGACCTGAGTTGGGTACCACATAGTTTTGTCACTGAAAAAAGACACTTCTCTGACTaGCTTGGGAACAGGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: HNYPYDLSWVPHSFVTEKRHFSD*LGNRTQ Trigger: TTGTGTCCTGTTCCCAAGGCAGTCAGAGAAGTGTCT...TTTTTCAGTGACAAAACTATGTGGTACCCAACTCAGGTCATAAGGATAGTTATG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR GCA 90 bp | TTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGACTATACTTCATCTTCAGAACTaGCAGGAAGTGGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEYNHKQCLKFPEFSVTILHLQN*QEVGPA Trigger: AGCTGGACCCACTTCCTGGCAGTTCTGAAGATGAAG...TATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| 3UTR CAA 72 bp | TCTCAAACCTTCTTTGAATACAACCACAAACAGTGCTaGAAGTTCCCTGAATTTTCAGTGACTATAAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SQTFFEYNHKQC*KFPEFSVTIRY Trigger: ATATCTTATAGTCACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGTTTGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 90 bp | CAACCTTCCGACCCTGAACCGGCCTTTCCCGCTCCAAGCGTTCTGTaGAGAAAGGACTGCAGGCAGACAGGATGCAGCAGTGGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPSDPEPAFPAPSVL*RKDCRQTGCSSGLG Trigger: TCCCAGCCCACTGCTGCATCCTGTCTGCCTGCAGTCCTTTCTTCACAGAACGCTTGGAGCGGGAAAGGCCGGTTCAGGGTCGGAAGGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | CCCTCCTCTACAGAGCTGGAGGTAGGGGCTCTGAGTTCAGGGCTCTaGTTCTTGTTCTCAGCCGGCTTCCCAACATCGGATGGGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSSTELEVGALSSGL*FLFSAGFPTSDGSG Trigger: TCCAGACCCATCCGATGTTGGGAAGCCGGCTGAGAACAAGAAGCAGAGCCCTGAACTCAGAGCCCCTACCTCCAGCTCTGTAGAGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 90 bp | CAACCTCACTGCCCCAAGAGGACTAGGAGTCTGGGTGACAGGCAGTaGAGTTTGAGGGCGACTCTTGGGTCCCACCACTCTGGCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPHCPKRTRSLGDRQ*SLRATLGSHHSGRD Trigger: ATCTCTGCCAGAGTGGTGGGACCCAAGAGTCGCCCTCAAACTCCACTGCCTGTCACCCAGACTCCTAGTCCTCTTGGGGCAGTGAGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | TATTGCTGTTTGACTTCTGCCTGGTGCGGAAACCTGAGGAGGGGAGATCAGTTCCCACTCTGGCAGAGATaGGCGCAGCAGCCGGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YCCLTSAWCGNLRRGDQFPLWQR*AQQPAV Trigger: AACCGCCGGCTGCTGCGCCAATCTCTGCCAGAGTGG...GAACTGATCTCCCCTCCTCAGGTTTCCGCACCAGGCAGAAGTCAAACAGCAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 90 bp | GTTTGGATCTTTAGGCCTCCCATCTCCAGCACAACCTTCCGACCCTaGACCGGCCTTTCCCGCTCCAAGCGTTCTGTGAAGAAAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VWIFRPPISSTTFRP*TGLSRSKRSVKKGL Trigger: CAGTCCTTTCTTCACAGAACGCTTGGAGCGGGAAAGGCCGGTTCAGGGTCGGAAGGTTGTGCTGGAGATGGGAGGCCTAAAGATCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 90 bp | GAAGGCTCTTCTACATCTGAGGGTTCTAGGATCTGGGGGCTATCTTaGGTGTTTCTGAGGGGAGGCTCCTGTACCACCTCCCAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGSSTSEGSRIWGLS*VFLRGGSCTTSQQV Trigger: CACCTGCTGGGAGGTGGTACAGGAGCCTCCCCTCAGAAACACTCAAGATAGCCCCCAGATCCTAGAACCCTCAGATGTAGAAGAGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | GGTTTCTGCTTATCCACACCCTGTGCTTCTTTACTTACAGTTCTCTaGCTCCAAAGACGGCGGCCAGGGGCTGTGGGCATTGAGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFCLSTPCASLLTVL*LQRRRPGAVGIELG Trigger: TCCCAGCTCAATGCCCACAGCCCCTGGCCGCCGTCTTTGGAGGCAGAGAACTGTAAGTAAAGAAGCACAGGGTGTGGATAAGCAGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | GCTTCTTGTTCTCAGCCGGCTTCCCAACATCGGATGGGTCTGGAGTaGTCTGTAGAGGACGGACTTCCCCTGGTTTCTGCTTATCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ASCSQPASQHRMGLE*SVEDGLPLVSAYPH Trigger: GTGTGGATAAGCAGAAACCAGGGGAAGTCCGTCCTCTACAGAGCACTCCAGACCCATCCGATGTTGGGAAGCCGGCTGAGAACAAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | GGTGAAGGCTTTGAGCGGCTCAGCCTGATCTTTCTGGGCAACAGTTaGTCATCCACAGAAGGGTACAAGCTGGGAAGTGCTGTAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: GEGFERLSLIFLGNS*SSTEGYKLGSAVGP Trigger: TGGTCCTACAGCACTTCCCAGCTTGTACCCTTCTGTGGATGAGCAACTGTTGCCCAGAAAGATCAGGCTGAGCCGCTCAAAGCCTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | TATTGCTGTTTGACTTCTGCCTGGTGCGGAAACCTGAGGAGGGGAGATCAGTTCTCAGGGCTCTGCTTCTaGTTCTCAGCCGGCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YCCLTSAWCGNLRRGDQFSGLCF*FSAGFP Trigger: TGGGAAGCCGGCTGAGAACAAGAAGCAGAGCCCTGA...GAACTGATCTCCCCTCCTCAGGTTTCCGCACCAGGCAGAAGTCAAACAGCAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 90 bp | CAAGTCAGATTCCTTCCCTGTCAGCATTGGACTAGACCCAAACTCTaGCTTCACCATAGGGTGGTCTGGGGAGTGGCTAGCAGAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVRFLPCQHWTRPKL*LHHRVVWGVASREQ Trigger: CTGCTCTCTGCTAGCCACTCCCCAGACCACCCTATGGTGAAGTCAGAGTTTGGGTCTAGTCCAATGCTGACAGGGAAGGAATCTGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | CAGCAGGTGCCATTGACAATCTTCCTAAGTTTTACTCTTCCAACCTaGCCCTCCTCTACAGAGCTGGAGGTAGGGGCTCTGAGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QQVPLTIFLSFTLPT*PSSTELEVGALSSG Trigger: CCCTGAACTCAGAGCCCCTACCTCCAGCTCTGTAGAGGAGGGGCAGGTTGGAAGAGTAAAACTTAGGAAGATTGTCAATGGCACCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 90 bp | CTCTGCGAAGGGTCAGAGGAGTCAAAGTGGAGAAGTTTTTCTCCCTaGCCATCCAGTGGCTGGGAGCTGGTAATTTCAAGGTCTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LCEGSEESKWRSFSP*PSSGWELVISRSGV Trigger: GACTCCAGACCTTGAAATTACCAGCTCCCAGCCACTGGATGGTCAGGGAGAAAAACTTCTCCACTTTGACTCCTCTGACCCTTCGCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | TCTGGGCAACAGTTGCTCATCCACAGAAGGGTACAAGCTGGGAAGTaGTGTAGGACCAGGGTTACTCTTGGTTTCCTTAGGTCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGQQLLIHRRVQAGK*CRTRVTLGFLRSFS Trigger: AGAGAAGGACCTAAGGAAACCAAGAGTAACCCTGGTCCTACAGCACTTCCCAGCTTGTACCCTTCTGTGGATGAGCAACTGTTGCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 90 bp | GTCAGAGGAGTCAAAGTGGAGAAGTTTTTCTCCCTGACCATCCAGTaGCTGGGAGCTGGTAATTTCAAGGTCTGGAGTCCAAGAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRGVKVEKFFSLTIQ*LGAGNFKVWSPRAS Trigger: AGAGGCTCTTGGACTCCAGACCTTGAAATTACCAGCTCCCAGCCACTGGATGGTCAGGGAGAAAAACTTCTCCACTTTGACTCCTCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 90 bp | CCAGTCTACCACATCAATCTCTTCATCTTCAGAACTGCCAGGAAGTaGGTCCAGCTGTTCAGGGTTGGCAGACACTTCTCTGACTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVYHINLFIFRTARK*VQLFRVGRHFSDCL Trigger: AAGGCAGTCAGAGAAGTGTCTGCCAACCCTGAACAGCTGGACCCACTTCCTGGCAGTTCTGAAGATGAAGAGATTGATGTGGTAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | CTTGCTTTTCTGCCAAGAACGCCTTCTGTTGATGAACAGTTATCACCCTCCCAGCAGGGGCTGTGGGCATaGAGCTGGGACCACTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LAFLPRTPSVDEQLSPSQQGLWA*SWDHLI Trigger: TATTAAGTGGTCCCAGCTCAATGCCCACAGCCCCTG...CTGGGAGGGTGATAACTGTTCATCAACAGAAGGCGTTCTTGGCAGAAAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | TGTAACACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGAGAGAGCAGAATGTCTaGAAGCCTAGGGCTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CNTSYRRLRQKSKFKASLREQNV*KPRALW Trigger: CCAGAGAGCCCTAGGCTTCAAGACATTCTGCTCTCT...CAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGTGTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | TGTAACACTAGCTACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGCTGACAGGTGATAACTaGGGGTTCTGCAGCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CNTSYRRLRQKSKFKASLLTGDN*GFCSLQ Trigger: CTGAAGGCTGCAGAACCCCAAGTTATCACCTGTCAG...CAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTAGCTAGTGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | CAATCCAATTCTTTCCTGTTTCTGACAGGTGATAACTTGGGGTTCTaGAGCCTTCAGCCCCAGGACTCTCCAAAGATCCTACTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSNSFLFLTGDNLGF*SLQPQDSPKILLVA Trigger: AGCCACCAGTAGGATCTTTGGAGAGTCCTGGGGCTGAAGGCTGCAGAACCCCAAGTTATCACCTGTCAGAAACAGGAAAGAATTGGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 90 bp | TTTCCACTGTCCAGTCTACCACATCAATCTCTTCATCTTCAGAACTaGCAGGAAGTGGGTCCAGCTGTTCAGGGTTGGCAGACACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPLSSLPHQSLHLQN*QEVGPAVQGWQTLL Trigger: GAGAAGTGTCTGCCAACCCTGAACAGCTGGACCCACTTCCTGGCAGTTCTGAAGATGAAGAGATTGATGTGGTAGACTGGACAGTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 90 bp | GACAAGGGGACTAAAGGGCTCAACTGGCTCTTTGTTCTCACTAACTaGTTCCTTTTCCAATCCTGTGAGGTCTCTGGGCCAGAGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DKGTKGLNWLFVLTN*FLFQSCEVSGPEFH Trigger: ATGGAACTCTGGCCCAGAGACCTCACAGGATTGGAAAAGGAACCAGTTAGTGAGAACAAAGAGCCAGTTGAGCCCTTTAGTCCCCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | TACAGGAGGCTGAGGCAGAAGTCAAAGTTCAAAGCCAGCCTGGGCAATTTAGAGTTCCTGTACAGGATTTaGGAACTGGCAGGAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YRRLRQKSKFKASLGNLEFLYRI*ELAGEH Trigger: GTGCTCTCCTGCCAGTTCCAAAATCCTGTACAGGAA...CTCTAAATTGCCCAGGCTGGCTTTGAACTTTGACTTCTGCCTCAGCCTCCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTCTCAGCCTCACAAGGTaGGCCAAGCAAGGTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRSGRGSNIFLASVAALSLTR*AKQGCV Trigger: GACACAACCTTGCTTGGCCAACCTTGTGAGGCTGAG...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 90 bp | TTCTGTGTTCTCAGAGCGCATGACAAGGGGACTAAAGGGCTCAACTaGCTCTTTGTTCTCACTAACTGGTTCCTTTTCCAATCCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FCVLRAHDKGTKGLN*LFVLTNWFLFQSCE Trigger: CTCACAGGATTGGAAAAGGAACCAGTTAGTGAGAACAAAGAGCCAGTTGAGCCCTTTAGTCCCCTTGTCATGCGCTCTGAGAACACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | CTACTTCTCAGAAGTGGTCGTGGAAGTAACATCTTTCTAGCTTCTGTGGCAGCTGGACCAGGGTTACTCTaGGTTTCCTTAGGTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLRSGRGSNIFLASVAAGPGLL*VSLGPS Trigger: AGAAGGACCTAAGGAAACCAAGAGTAACCCTGGTCC...AGCTGCCACAGAAGCTAGAAAGATGTTACTTCCACGACCACTTCTGAGAAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 90 bp | TTCCTTTTCCAATCCTGTGAGGTCTCTGGGCCAGAGTTCCATGTCTaGCAAACACCATTCTTCCCCTTCAATCCAATTCTTTCCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLFQSCEVSGPEFHV*QTPFFPFNPILSCF Trigger: GAAACAGGAAAGAATTGGATTGAAGGGGAAGAATGGTGTTTGCCAGACATGGAACTCTGGCCCAGAGACCTCACAGGATTGGAAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGTCCAGCTGTTCAGGGTaGGCAGACACTTCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVSSCSG*ADTSLT Trigger: AGTCAGAGAAGTGTCTGCCAACCCTGAACAGCTGGA...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGCTTTCTGGGCAACAGTaGCTCATCCACAGAAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVLSGQQ*LIHRRV Trigger: TACCCTTCTGTGGATGAGCAACTGTTGCCCAGAAAG...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | GGCAATTTAGAGATTCCACTCATTTCAGTGTTCTACTTAACATGGCTTCATTCCGTCCTTCTCTCTGGCTaGATGGAGATGATCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GNLEIPLISVFYLTWLHSVLLSG*MEMICF Trigger: AAAGCAGATCATCTCCATCAAGCCAGAGAGAAGGAC...GGAATGAAGCCATGTTAAGTAGAACACTGAAATGAGTGGAATCTCTAAATTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | AGCCTGGGCAATTTAGAGATTCCACTCATTTCAGTGTTCTACTTAACATGGCTTGGAGTCCTGACACAGTaGTATTCTAGCAGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGNLEIPLISVFYLTWLGVLTQ*YSSRYF Trigger: GAAATACCTGCTAGAATACAACTGTGTCAGGACTCC...AAGCCATGTTAAGTAGAACACTGAAATGAGTGGAATCTCTAAATTGCCCAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS-3UTR CAA 90 bp | ACCTTCTTTGAATACAACCACAAACAGTGCTTGAAGTTCCCTGAATTTTCAGTGTCCCAGCAGGTGCCATaGACAATCTTCCTAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TFFEYNHKQCLKFPEFSVSQQVP*TIFLSF Trigger: AAAACTTAGGAAGATTGTCAATGGCACCTGCTGGGA...CACTGAAAATTCAGGGAACTTCAAGCACTGTTTGTGGTTGTATTCAAAGAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 72 bp | GTGGAGTTTGAGGGCGACTCTTGGGTCCCACCACTCTaGCAGAGATTGGCGCAGCAGCCGGCGGTTGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VEFEGDSWVPPL*QRLAQQPAVVS Trigger: GCTTACAACCGCCGGCTGCTGCGCCAATCTCTGCCAGAGTGGTGGGACCCAAGAGTCGCCCTCAAACTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 72 bp | GAGGGCGACTCTTGGGTCCCACCACTCTGGCAGAGATaGGCGCAGCAGCCGGCGGTTGTAAGCACTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: EGDSWVPPLWQR*AQQPAVVSTLC Trigger: ACAGAGAGTGCTTACAACCGCCGGCTGCTGCGCCAATCTCTGCCAGAGTGGTGGGACCCAAGAGTCGCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 72 bp | TGCCCCAAGAGGACTAGGAGTCTGGGTGACAGGCAGTaGAGTTTGAGGGCGACTCTTGGGTCCCACCACTCT | + |
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Preference number: 6 (lower is better) Translates to: CPKRTRSLGDRQ*SLRATLGSHHS Trigger: AGAGTGGTGGGACCCAAGAGTCGCCCTCAAACTCCACTGCCTGTCACCCAGACTCCTAGTCCTCTTGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 90 bp | GTGGAGTTTGAGGGCGACTCTTGGGTCCCACCACTCTGGCAGAGATaGGCGCAGCAGCCGGCGGTTGTAAGCACTCTCTGTTTAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VEFEGDSWVPPLWQR*AQQPAVVSTLCLVF Trigger: GAAGACTAAACAGAGAGTGCTTACAACCGCCGGCTGCTGCGCCAATCTCTGCCAGAGTGGTGGGACCCAAGAGTCGCCCTCAAACTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 90 bp | TCTACAGAGCTGGAGGTAGGGGCTCTGAGTTCAGGGCTCTGCTTCTaGTTCTCAGCCGGCTTCCCAACATCGGATGGGTCTGGAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: STELEVGALSSGLCF*FSAGFPTSDGSGVL Trigger: GAGCACTCCAGACCCATCCGATGTTGGGAAGCCGGCTGAGAACAAGAAGCAGAGCCCTGAACTCAGAGCCCCTACCTCCAGCTCTGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 72 bp | GACCCTGAACCGGCCTTTCCCGCTCCAAGCGTTCTGTaGAGAAAGGACTGCAGGCAGACAGGATGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: DPEPAFPAPSVL*RKDCRQTGCSS Trigger: ACTGCTGCATCCTGTCTGCCTGCAGTCCTTTCTTCACAGAACGCTTGGAGCGGGAAAGGCCGGTTCAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | TCTCAGCCGGCTTCCCAACATCGGATGGGTCTGGAGTaGTCTGTAGAGGACGGACTTCCCCTGGTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SQPASQHRMGLE*SVEDGLPLVSA Trigger: AGCAGAAACCAGGGGAAGTCCGTCCTCTACAGAGCACTCCAGACCCATCCGATGTTGGGAAGCCGGCTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 72 bp | CAGTTCTCTGCCTCCAAAGACGGCGGCCAGGGGCTGTaGGCATTGAGCTGGGACCACTTAATATGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QFSASKDGGQGL*ALSWDHLICWK Trigger: CTTCCAGCATATTAAGTGGTCCCAGCTCAATGCCCACAGCCCCTGGCCGCCGTCTTTGGAGGCAGAGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 90 bp | CACCATAGGGTGGTCTGGGGAGTGGCTAGCAGAGAGCAGAATGTCTaGAAGCCTAGGGCTCTCTGGGGAGTCCTGACACAGTTGTATTCT | + |
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Preference number: 6 (lower is better) Translates to: HHRVVWGVASREQNV*KPRALWGVLTQLYS Trigger: AGAATACAACTGTGTCAGGACTCCCCAGAGAGCCCTAGGCTTCAAGACATTCTGCTCTCTGCTAGCCACTCCCCAGACCACCCTATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 72 bp | TCTACATCTGAGGGTTCTAGGATCTGGGGGCTATCTTaGGTGTTTCTGAGGGGAGGCTCCTGTACCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: STSEGSRIWGLS*VFLRGGSCTTS Trigger: GGAGGTGGTACAGGAGCCTCCCCTCAGAAACACTCAAGATAGCCCCCAGATCCTAGAACCCTCAGATGTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 72 bp | TTCCTTCCCTGTCAGCATTGGACTAGACCCAAACTCTaGCTTCACCATAGGGTGGTCTGGGGAGTGGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: FLPCQHWTRPKL*LHHRVVWGVAS Trigger: GCTAGCCACTCCCCAGACCACCCTATGGTGAAGTCAGAGTTTGGGTCTAGTCCAATGCTGACAGGGAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 72 bp | GTGGGTCCAGCTGTTCAGGGTTGGCAGACACTTCTCTaGCTGCCTTGGGAACAGGACACAATACGTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: VGPAVQGWQTLL*LPWEQDTIRHP Trigger: TGGATGACGTATTGTGTCCTGTTCCCAAGGCAGTCAGAGAAGTGTCTGCCAACCCTGAACAGCTGGACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | TTATCCACACCCTGTGCTTCTTTACTTACAGTTCTCTaGCTCCAAAGACGGCGGCCAGGGGCTGTGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: LSTPCASLLTVL*LQRRRPGAVGI Trigger: AATGCCCACAGCCCCTGGCCGCCGTCTTTGGAGGCAGAGAACTGTAAGTAAAGAAGCACAGGGTGTGGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 90 bp | GGTAGCTGCAGCACTTGTGATTCGATACTGCTCAGCCTCACAAGGTaGGCCAAGCAAGGTTGTGTCGAATGTGTAGGGCTCTCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GSCSTCDSILLSLTR*AKQGCVECVGLSAV Trigger: GACTGCAGAGAGCCCTACACATTCGACACAACCTTGCTTGGCCAACCTTGTGAGGCTGAGCAGTATCGAATCACAAGTGCTGCAGCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | TTTGAGCGGCTCAGCCTGATCTTTCTGGGCAACAGTTaGTCATCCACAGAAGGGTACAAGCTGGGAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: FERLSLIFLGNS*SSTEGYKLGSA Trigger: AGCACTTCCCAGCTTGTACCCTTCTGTGGATGAGCAACTGTTGCCCAGAAAGATCAGGCTGAGCCGCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | CAGTTGCTCATCCACAGAAGGGTACAAGCTGGGAAGTaGTGTAGGACCAGGGTTACTCTTGGTTTCCTTAGG | + |
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Preference number: 6 (lower is better) Translates to: QLLIHRRVQAGK*CRTRVTLGFLR Trigger: CCTAAGGAAACCAAGAGTAACCCTGGTCCTACAGCACTTCCCAGCTTGTACCCTTCTGTGGATGAGCAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | TCCAGTCTACCACATCAATCTCTTCATCTTCAGAACTaGCAGGAAGTGGGTCCAGCTGTTCAGGGTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSLPHQSLHLQN*QEVGPAVQGWQ Trigger: CTGCCAACCCTGAACAGCTGGACCCACTTCCTGGCAGTTCTGAAGATGAAGAGATTGATGTGGTAGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 72 bp | AGCACTTGTGATTCGATACTGCTCAGCCTCACAAGGTaGGCCAAGCAAGGTTGTGTCGAATGTGTAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: STCDSILLSLTR*AKQGCVECVGL Trigger: GAGCCCTACACATTCGACACAACCTTGCTTGGCCAACCTTGTGAGGCTGAGCAGTATCGAATCACAAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 90 bp | ACAGAAGGGTACAAGCTGGGAAGTGCTGTAGGACCAGGGTTACTCTaGGTTTCCTTAGGTCCTTCTCTCTGGCTTGATGGAGATGATCTG | + |
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Preference number: 6 (lower is better) Translates to: TEGYKLGSAVGPGLL*VSLGPSLWLDGDDL Trigger: CAGATCATCTCCATCAAGCCAGAGAGAAGGACCTAAGGAAACCAAGAGTAACCCTGGTCCTACAGCACTTCCCAGCTTGTACCCTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | ACGGACTTCCCCTGGTTTCTGCTTATCCACACCCTGTaGTTCTTTACTTACAGTTCTCTGCCTCCAAAGACG | + |
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Preference number: 6 (lower is better) Translates to: TDFPWFLLIHTL*FFTYSSLPPKT Trigger: CGTCTTTGGAGGCAGAGAACTGTAAGTAAAGAAGCACAGGGTGTGGATAAGCAGAAACCAGGGGAAGTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | TCTTTCCTGTTTCTGACAGGTGATAACTTGGGGTTCTaGAGCCTTCAGCCCCAGGACTCTCCAAAGATCCTA | + |
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Preference number: 6 (lower is better) Translates to: SFLFLTGDNLGF*SLQPQDSPKIL Trigger: TAGGATCTTTGGAGAGTCCTGGGGCTGAAGGCTGCAGAACCCCAAGTTATCACCTGTCAGAAACAGGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 72 bp | GTCAAAGTGGAGAAGTTTTTCTCCCTGACCATCCAGTaGCTGGGAGCTGGTAATTTCAAGGTCTGGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VKVEKFFSLTIQ*LGAGNFKVWSP Trigger: TGGACTCCAGACCTTGAAATTACCAGCTCCCAGCCACTGGATGGTCAGGGAGAAAAACTTCTCCACTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 72 bp | TACAAGCTGGGAAGTGCTGTAGGACCAGGGTTACTCTaGGTTTCCTTAGGTCCTTCTCTCTGGCTTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: YKLGSAVGPGLL*VSLGPSLWLDG Trigger: TCCATCAAGCCAGAGAGAAGGACCTAAGGAAACCAAGAGTAACCCTGGTCCTACAGCACTTCCCAGCTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 72 bp | GATACTGCTCAGCCTCACAAGGTTGGCCAAGCAAGGTaGTGTCGAATGTGTAGGGCTCTCTGCAGTCAATAT | + |
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Preference number: 6 (lower is better) Translates to: DTAQPHKVGQAR*CRMCRALCSQY Trigger: ATATTGACTGCAGAGAGCCCTACACATTCGACACAACCTTGCTTGGCCAACCTTGTGAGGCTGAGCAGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 90 bp | TTCTCAGAGCGCATGACAAGGGGACTAAAGGGCTCAACTGGCTCTTaGTTCTCACTAACTGGTTCCTTTTCCAATCCTGTGAGGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FSERMTRGLKGSTGS*FSLTGSFSNPVRSL Trigger: CAGAGACCTCACAGGATTGGAAAAGGAACCAGTTAGTGAGAACAAAGAGCCAGTTGAGCCCTTTAGTCCCCTTGTCATGCGCTCTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 72 bp | CAATCCTGTGAGGTCTCTGGGCCAGAGTTCCATGTCTaGCAAACACCATTCTTCCCCTTCAATCCAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: QSCEVSGPEFHV*QTPFFPFNPIL Trigger: AAGAATTGGATTGAAGGGGAAGAATGGTGTTTGCCAGACATGGAACTCTGGCCCAGAGACCTCACAGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 72 bp | ACTAAAGGGCTCAACTGGCTCTTTGTTCTCACTAACTaGTTCCTTTTCCAATCCTGTGAGGTCTCTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TKGLNWLFVLTN*FLFQSCEVSGP Trigger: TGGCCCAGAGACCTCACAGGATTGGAAAAGGAACCAGTTAGTGAGAACAAAGAGCCAGTTGAGCCCTTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CCA 72 bp | CTCAGAGCGCATGACAAGGGGACTAAAGGGCTCAACTaGCTCTTTGTTCTCACTAACTGGTTCCTTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LRAHDKGTKGLN*LFVLTNWFLFQ Trigger: TTGGAAAAGGAACCAGTTAGTGAGAACAAAGAGCCAGTTGAGCCCTTTAGTCCCCTTGTCATGCGCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS CAA 72 bp | CGCATGACAAGGGGACTAAAGGGCTCAACTGGCTCTTaGTTCTCACTAACTGGTTCCTTTTCCAATCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RMTRGLKGSTGS*FSLTGSFSNPV Trigger: CACAGGATTGGAAAAGGAACCAGTTAGTGAGAACAAAGAGCCAGTTGAGCCCTTTAGTCCCCTTGTCATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS TCA 72 bp | CAGTTGTATTCTAGCAGGTATTTCCTGCTCATTAACTaGGGACAGCAGAGTTCCAGAAGGCTCTTCTACATC | + |
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Preference number: 6 (lower is better) Translates to: QLYSSRYFLLIN*GQQSSRRLFYI Trigger: GATGTAGAAGAGCCTTCTGGAACTCTGCTGTCCTCAGTTAATGAGCAGGAAATACCTGCTAGAATACAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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| CDS GCA 72 bp | CATAAAATCAAAAATCTCTTCCAGTTCACTGGTAGCTaGAGCACTTGTGATTCGATACTGCTCAGCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: HKIKNLFQFTGS*STCDSILLSLT Trigger: TGTGAGGCTGAGCAGTATCGAATCACAAGTGCTGCAGCTACCAGTGAACTGGAAGAGATTTTTGATTTTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133437.3 |
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