Pregenerated sensors for BTBD17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000202Ensembl transcript IDs: ENSMUST00000000206.4
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTaGTCACCCAAGGCCCGGGCCAACAGTCACTTTGAC | + |
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Preference number: 3 (lower is better) Translates to: HLPSTLVPTGCT*SPKARANSHFD Trigger: GTCAAAGTGACTGTTGGCCCGGGCCTTGGGTGATCAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| 3UTR TCA 72 bp | CACCTGATCACCCAAGGCCCGGGCCAACAGTCACTTTaGCACCCTGGTGCGCCATCCAGGCCTAGCCTTATT | + |
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Preference number: 3 (lower is better) Translates to: HLITQGPGQQSL*HPGAPSRPSLI Trigger: AATAAGGCTAGGCCTGGATGGCGCACCAGGGTGTCAAAGTGACTGTTGGCCCGGGCCTTGGGTGATCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR TCA 90 bp | CACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCAGACCGGCCGCAAGCTaGCGGGCAGCCAGCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: HSHFVYHIHLPSTLVPTGRPAAS*RAASAG Trigger: CCCCGCGCTGGCTGCCCGTCAGCTTGCGGCCGGTCT...GCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGATCACCCAACTGCAGCAAGAGATCTaGCACCGCCGGGCCGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PHSPAFHPSPNRLHLITQLQQEI*HRRAVA Trigger: CGCCACGGCCCGGCGGTGGCAGATCTCTTGCTGCAG...TTGGGTGATCAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGATCACCTTGGTGGCCAGCCTGTaGAGCGGGATAGCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPHSPAFHPSPNRLHLITLVASL*SGIAWA Trigger: GGCCCAGGCTATCCCGCTGCACAGGCTGGCCACCAA...GGTGATCAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGGCGGCCGAGCGCGCCTaGAGCTGGAAAAGCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PQPFCLPHSPAFHPSPNRAAERA*SWKSCA Trigger: TGCACAGCTTTTCCAGCTGCAGGCGCGCTCGGCCGC...CCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | TTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGGCGCCTCTGCAGATCTaGGTGGGCCAGGAAGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: FCLPHSPAFHPSPNRLHLAPLQI*VGQEVA Trigger: GGCGACTTCCTGGCCCACGCAGATCTGCAGAGGCGC...CAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGATCACCCGCTGGAGCAGCATGTaGGAGTGGTTGATGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPHSPAFHPSPNRLHLITRWSSM*EWLMAV Trigger: CACCGCCATCAACCACTCCCACATGCTGCTCCAGCG...GGTGATCAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCCACGCCTCCAGCGCGTaGAACAGCTCCAGCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: HSHFVYHIHLPSTLVPTGHASSA*NSSSSS Trigger: GGATGAGCTGGAGCTGTTCCACGCGCTGGAGGCGTG...GCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR TCA 90 bp | GAGAAGGCACTCCTGAAACCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCGGCGACCCGCGTCATaGCCACTGGGTCCCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: EKALLKPQPFCLPHSPAFRRPAS*PLGPNC Trigger: GCAGTTGGGACCCAGTGGTCATGACGCGGGTCGCCG...GAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGGTTTCAGGAGTGCCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CTTCAGTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCACCAGGTCCGAGCGCTaGAGGAGCTGCGCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LQYLAPLSIGLFCTKNAATRSER*RSCASN Trigger: GTTGCTGGCGCAGCTCCTGCAGCGCTCGGACCTGGT...GGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTACTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CTTCAGTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCCTGGGGCGAGGTAGTTaGGCGGCAGAAAGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQYLAPLSIGLFCTKNAALGRGS*AAERRC Trigger: GCAGCGCCTTTCTGCCGCGCAACTACCTCGCCCCAG...GGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTACTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGTGCAGCGGGATAGCCTaGGCCAGCAGTACAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PQPFCLPHSPAFHPSPNRCSGIA*ASSTVS Trigger: GCTGACTGTACTGCTGGCCCAGGCTATCCCGCTGCA...CCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | AAACCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACTCATCGGGTAGCGGATaGCGCGCAGCGCTCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KPQPFCLPHSPAFHPSPNSSGSG*RAALAR Trigger: CCGAGCGAGCGCTGCGCGCCATCCGCTACCCGATGA...GTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCACCAGCACTGTCTTCTaGAAGCTCACGCCCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: HSHFVYHIHLPSTLVPTGTSTVF*KLTPAA Trigger: TGCGGCGGGCGTGAGCTTCCAGAAGACAGTGCTGGT...GCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTCTGCAGATCTGCGTaGGCCAGGAAGTCGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PQPFCLPHSPAFHPSPNRLCRSA*ARKSPA Trigger: AGCTGGCGACTTCCTGGCCCACGCAGATCTGCAGAG...CCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAAATTGATGGCGGTGCCTGCTaGCTCCCCACCCACATCGGC | + |
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Preference number: 4 (lower is better) Translates to: PGPSEHRFILYQECCLQIDGGAC*LPTHIG Trigger: GCCGATGTGGGTGGGGAGGCAGCAGGCACCGCCATC...AATTTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | GGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAAATTAGCGCCTCCCGCCAGGTGTaGGCGCATGTAGTCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPSEHRFILYQECCLQISASRQV*AHVVGH Trigger: GTGGCCGACTACATGCGCGCACACCTGGCGGGAGGC...GCTAATTTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | TTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGCCACTGGGTCCCAACTaGGTCTGGAAACTGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FCLPHSPAFHPSPNRLHLPLGPN*VWKLVL Trigger: CAGCACCAGTTTCCAGACGCAGTTGGGACCCAGTGG...CAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACATGCTACTCGGTACTTaGTGGCCAGCCTGTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PFCLPHSPAFHPSPNRLHMLLGT*WPACAA Trigger: CGCTGCACAGGCTGGCCACCAAGTACCGAGTAGCAT...GTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | TTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGACTGCGTCTGGAAACTaGTGCTGCGATCGTCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCLPHSPAFHPSPNRLHLTASGN*CCDRRE Trigger: CTCGCGACGATCGCAGCACCAGTTTCCAGACGCAGT...CAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | GAGAAGGCACTCCTGAAACCACAGCCATTTTGTCTACCACATTCACCTGCCTTCGTTGATGGCGGTGCCTaGTGCCTCCCCACCCACATC | + |
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Preference number: 4 (lower is better) Translates to: EKALLKPQPFCLPHSPAFVDGGA*CLPTHI Trigger: GATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAAC...GAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGGTTTCAGGAGTGCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCAGCATAACCTCACTCTaGTTGCTCAGCAGCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: HSHFVYHIHLPSTLVPTGSITSL*LLSSSR Trigger: CCGGGAGCTGCTGAGCAACCAGAGTGAGGTTATGCT...GCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CAGTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCCCGCGTCATGACCACTaGGTCCCAACTGCGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QYLAPLSIGLFCTKNAAFPRHDH*VPTASG Trigger: TCCAGACGCAGTTGGGACCCAGTGGTCATGACGCGG...GAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR TCA 90 bp | GAGAAGGCACTCCTGAAACCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCCTGGACCCGCAGGATaGCATCACTGGCATTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: EKALLKPQPFCLPHSPAFPGPAG*HHWHCP Trigger: AGGGCAATGCCAGTGATGTCATCCTGCGGGTCCAGG...GAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGGTTTCAGGAGTGCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | GTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAACTACTCGGTACTTGGTaGCCAGCCTGTGCAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VPGPSEHRFILYQECCLQLLGTW*PACAAG Trigger: TCCCGCTGCACAGGCTGGCCACCAAGTACCGAGTAG...TTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | GGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAAATTAGCGAGCGCGCCTGCAGCTaGAAAAGCTGTGCAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GPSEHRFILYQECCLQISERACS*KSCAGG Trigger: TCCGCCTGCACAGCTTTTCCAGCTGCAGGCGCGCTC...GCTAATTTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAAATTAGCTGGTGGCGCAGCAGGTCCTaGAGTCGCTGGAGCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: PSEHRFILYQECCLQISWWRSRS*SRWSSM Trigger: CATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCA...CCAGCTAATTTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | GTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAATTCCAAGCCAGGAACTaGAGGCAGCTCTCGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VPGPSEHRFILYQECCLQFQARN*RQLSRR Trigger: TCTGCGCGAGAGCTGCCTGCAGTTCCTGGCTTGGAA...TTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CTTCAGTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCCAGCTGGAAAAGCTGTaGAGGCGGAATCATCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LQYLAPLSIGLFCTKNAAQLEKL*RRNHRV Trigger: TACCCGATGATTCCGCCTGCACAGCTTTTCCAGCTG...GGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTACTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | AATGCTGCCTTCAAATTAGCTGGAGAAGGCACTCCTGAAACCACAGCCATTTTGGGTCCCAACTGCGTCTaGAAACTGGTGCTGCGATCG | + |
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Preference number: 4 (lower is better) Translates to: NAAFKLAGEGTPETTAILGPNCV*KLVLRS Trigger: CGATCGCAGCACCAGTTTCCAGACGCAGTTGGGACC...CAAAATGGCTGTGGTTTCAGGAGTGCCTTCTCCAGCTAATTTGAAGGCAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR GCA 90 bp | CCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAAATTAGCTGGACAATGAGATGGAGATaGAGCGCATTCTCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSEHRFILYQECCLQISWTMRWR*SAFSTR Trigger: CCTGGTGGAGAATGCGCTGCATCTCCATCTCATTGT...CCAGCTAATTTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CCA 90 bp | CCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAAATTAGCTGGGGCTTGACAATGAGATaGAGATGCAGCGCATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSEHRFILYQECCLQISWGLTMR*RCSAFS Trigger: GGAGAATGCGCTGCATCTCCATCTCATTGTCAAGCC...CCAGCTAATTTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | CAACGGCGAGGCGGCGTGGAACTGGTAAGCCTGCAGCAAGAGATCTaGCACCGCCGGGCCGTGGCGCGCCAGCGCGGCCGAGCGCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: QRRGGVELVSLQQEI*HRRAVARQRGRARL Trigger: CAGGCGCGCTCGGCCGCGCTGGCGCGCCACGGCCCGGCGGTGGCAGATCTCTTGCTGCAGGCTTACCAGTTCCACGCCGCCTCGCCGTTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | AGCTCCAGCTCATCCTGCAGCACCAGGTCCGAGCGCTGCAGGAGCTaGGCCAGCAACTCGGGGCTCACGGCTCCCCACTCCGCGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: SSSSSCSTRSERCRS*ASNSGLTAPHSALP Trigger: GGGGAGCGCGGAGTGGGGAGCCGTGAGCCCCGAGTTGCTGGCGCAGCTCCTGCAGCGCTCGGACCTGGTGCTGCAGGATGAGCTGGAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | GTAGTGGTACCAGCCCACAGCGGGGCCCACGCCTCCCGCCAGGTGTaGGCGCATGTAGTCGGCCACGCCTCGCTGCAAGGATGCTACTCG | + |
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Preference number: 5 (lower is better) Translates to: VVVPAHSGAHASRQV*AHVVGHASLQGCYS Trigger: CGAGTAGCATCCTTGCAGCGAGGCGTGGCCGACTACATGCGCGCACACCTGGCGGGAGGCGTGGGCCCCGCTGTGGGCTGGTACCACTAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 90 bp | CCCTGGCGCAGCAGGTCCTGCAGTCGCTGGAGCAGCATGTGGGAGTaGTTGATGGCGGTGCCTGCTGCCTCCCCACCCACATCGGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PWRSRSCSRWSSMWE*LMAVPAASPPTSAL Trigger: GAGAGCCGATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 90 bp | TCCCGGAACAGCTCACTGTGCAGCCCCAGCAACAGGCGATGGGTGTaGAAGGCTCGGACCTCGTCGGTGCCCACAGCCTGGACCCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SRNSSLCSPSNRRWV*KARTSSVPTAWTRR Trigger: CCTGCGGGTCCAGGCTGTGGGCACCGACGAGGTCCGAGCCTTCCACACCCATCGCCTGTTGCTGGGGCTGCACAGTGAGCTGTTCCGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS TCA 90 bp | GGAAGGCTCGGACCTCGTCGGTGCCCACAGCCTGGACCCGCAGGATaGCATCACTGGCATTGCCCTGGCGCAGCAGGTCCTGCAGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: GRLGPRRCPQPGPAG*HHWHCPGAAGPAVA Trigger: AGCGACTGCAGGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCATCCTGCGGGTCCAGGCTGTGGGCACCGACGAGGTCCGAGCCTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | CACTCCGCGCTCCCCGCCACGGCAGAAAGGTTCCAAGCCAGGAACTaGAGGCAGCTCTCGCGCAGAGCCTCATCCCCGGTGCTAACAGCG | + |
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Preference number: 5 (lower is better) Translates to: HSALPATAERFQARN*RQLSRRASSPVLTA Trigger: CGCTGTTAGCACCGGGGATGAGGCTCTGCGCGAGAGCTGCCTGCAGTTCCTGGCTTGGAACCTTTCTGCCGTGGCGGGGAGCGCGGAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 90 bp | GCATTGCCCTGGCGCAGCAGGTCCTGCAGTCGCTGGAGCAGCATGTaGGAGTGGTTGATGGCGGTGCCTGCTGCCTCCCCACCCACATCG | + |
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Preference number: 5 (lower is better) Translates to: ALPWRSRSCSRWSSM*EWLMAVPAASPPTS Trigger: CGATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCAGGGCAATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | CGCCAGGTGTGCGCGCATGTAGTCGGCCACGCCTCGCTGCAAGGATaGTACTCGGTACTTGGTGGCCAGCCTGTGCAGCGGGATAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RQVCAHVVGHASLQG*YSVLGGQPVQRDSL Trigger: CAGGCTATCCCGCTGCACAGGCTGGCCACCAAGTACCGAGTAGCATCCTTGCAGCGAGGCGTGGCCGACTACATGCGCGCACACCTGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | CAGTCGCTGGAGCAGCATGTGGGAGTGGTTGATGGCGGTGCCTGCTaGCTCCCCACCCACATCGGCTCTCTGAGCTGCACGAGTGACCAG | + |
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Preference number: 5 (lower is better) Translates to: QSLEQHVGVVDGGAC*LPTHIGSLSCTSDQ Trigger: CTGGTCACTCGTGCAGCTCAGAGAGCCGATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | CTGCAGTCGCTGGAGCAGCATGTGGGAGTGGTTGATGGCGGTGCCTaGTGCCTCCCCACCCACATCGGCTCTCTGAGCTGCACGAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: LQSLEQHVGVVDGGA*CLPTHIGSLSCTSD Trigger: GTCACTCGTGCAGCTCAGAGAGCCGATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS TCA 90 bp | TGGTTGATGGCGGTGCCTGCTGCCTCCCCACCCACATCGGCTCTCTaGGCTGCACGAGTGACCAGTCCCACCAAGGCCAGAATAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: WLMAVPAASPPTSAL*AARVTSPTKARIAQ Trigger: CTGGGCTATTCTGGCCTTGGTGGGACTGGTCACTCGTGCAGCTCAGAGAGCCGATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS TCA 90 bp | CGCGGGGAGAAGAGCACGTTCCAGGTAATCCGGCGACCCGCGTCATaGCCACTGGGTCCCAACTGCGTCTGGAAACTGGTGCTGCGATCG | + |
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Preference number: 5 (lower is better) Translates to: RGEKSTFQVIRRPAS*PLGPNCVWKLVLRS Trigger: CGATCGCAGCACCAGTTTCCAGACGCAGTTGGGACCCAGTGGTCATGACGCGGGTCGCCGGATTACCTGGAACGTGCTCTTCTCCCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | ACCCGCAGGATGACATCACTGGCATTGCCCTGGCGCAGCAGGTCCTaGAGTCGCTGGAGCAGCATGTGGGAGTGGTTGATGGCGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRRMTSLALPWRSRS*SRWSSMWEWLMAVP Trigger: AGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCATCCTGCGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 90 bp | ATGACATCACTGGCATTGCCCTGGCGCAGCAGGTCCTGCAGTCGCTaGAGCAGCATGTGGGAGTGGTTGATGGCGGTGCCTGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MTSLALPWRSRSCSR*SSMWEWLMAVPAAS Trigger: GGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | ACGCCTCGCTGCAAGGATGCTACTCGGTACTTGGTGGCCAGCCTGTaGAGCGGGATAGCCTGGGCCAGCAGTACAGTCAGCTCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TPRCKDATRYLVASL*SGIAWASSTVSSPQ Trigger: CTGTGGTGAGCTGACTGTACTGCTGGCCCAGGCTATCCCGCTGCACAGGCTGGCCACCAAGTACCGAGTAGCATCCTTGCAGCGAGGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | ATAACCTCACTCTGGTTGCTCAGCAGCTCCCGGAACAGCTCACTGTaGAGCCCCAGCAACAGGCGATGGGTGTGGAAGGCTCGGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ITSLWLLSSSRNSSL*SPSNRRWVWKARTS Trigger: CGAGGTCCGAGCCTTCCACACCCATCGCCTGTTGCTGGGGCTGCACAGTGAGCTGTTCCGGGAGCTGCTGAGCAACCAGAGTGAGGTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | CCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGTCGTCGCGAGCCGGGTaGTTGATGACCCACGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQPFCLPHSPAFHPSPNRSSRAG*LMTHGA Trigger: CGCCCCGTGGGTCATCAACAACCCGGCTCGCGACGA...CCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | CTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGATCACCGATGCTACTCGGTACTaGGTGGCCAGCCTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPHSPAFHPSPNRLHLITDATRY*VASLCS Trigger: GCTGCACAGGCTGGCCACCAAGTACCGAGTAGCATC...GGTGATCAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | TGGAGATGCAGCGCATTCTCCACCAGGTATTCCGAGTTGCGCCTCTaGAGATCTGCGTGGGCCAGGAAGTCGCCAGCTTCTTCGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WRCSAFSTRYSELRL*RSAWARKSPASSLL Trigger: AAGCAGCGAAGAAGCTGGCGACTTCCTGGCCCACGCAGATCTGCAGAGGCGCAACTCGGAATACCTGGTGGAGAATGCGCTGCATCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | AAACCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACTCGCGAGCCGGGTTGTaGATGACCCACGGGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KPQPFCLPHSPAFHPSPNSRAGL*MTHGAP Trigger: GGGCGCCCCGTGGGTCATCAACAACCCGGCTCGCGA...GTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | CAGCGCATTCTCCACCAGGTATTCCGAGTTGCGCCTCTGCAGATCTaGGTGGGCCAGGAAGTCGCCAGCTTCTTCGCTGCTTTGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRILHQVFRVAPLQI*VGQEVASFFAALME Trigger: TTCCATCAAAGCAGCGAAGAAGCTGGCGACTTCCTGGCCCACGCAGATCTGCAGAGGCGCAACTCGGAATACCTGGTGGAGAATGCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 90 bp | CTGGGAGTCCGGATGAGGGTGTGGTACACCGGCTTGACAATGAGATaGAGATGCAGCGCATTCTCCACCAGGTATTCCGAGTTGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVRMRVWYTGLTMR*RCSAFSTRYSELRL Trigger: GAGGCGCAACTCGGAATACCTGGTGGAGAATGCGCTGCATCTCCATCTCATTGTCAAGCCGGTGTACCACACCCTCATCCGGACTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | CACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCATGACATCACTGGCATaGCCCTGGCGCAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSHFVYHIHLPSTLVPTGMTSLA*PWRSRS Trigger: GGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCAT...GCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 90 bp | GTCCGGATGAGGGTGTGGTACACCGGCTTGACAATGAGATGGAGATaGAGCGCATTCTCCACCAGGTATTCCGAGTTGCGCCTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRMRVWYTGLTMRWR*SAFSTRYSELRLCR Trigger: TCTGCAGAGGCGCAACTCGGAATACCTGGTGGAGAATGCGCTGCATCTCCATCTCATTGTCAAGCCGGTGTACCACACCCTCATCCGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 90 bp | GATGCTACTCGGTACTTGGTGGCCAGCCTGTGCAGCGGGATAGCCTaGGCCAGCAGTACAGTCAGCTCACCACAGTACAAATACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: DATRYLVASLCSGIA*ASSTVSSPQYKYLM Trigger: CATCAGGTATTTGTACTGTGGTGAGCTGACTGTACTGCTGGCCCAGGCTATCCCGCTGCACAGGCTGGCCACCAAGTACCGAGTAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | GAAGGCACTCCTGAAACCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCCAGGACCCAGGCTaGCAGGAACCTTTTCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGTPETTAILSTTFTCLPPQDPG*QEPFLS Trigger: GCTTAGAAAAGGTTCCTGCAAGCCTGGGTCCTGGGG...TGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGGTTTCAGGAGTGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | GTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAAATAACCTCACTCTGGTaGCTCAGCAGCTCCCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VPGPSEHRFILYQECCLQITSLW*LSSSRN Trigger: GTTCCGGGAGCTGCTGAGCAACCAGAGTGAGGTTAT...TTGAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | CAGTACCTGGCCCCTCTGAGCATCGGTTTATTCTGTACCAAGAATGCTGCCTTCAGCTTCTTCGCTGCTTaGATGGAAGCTGTAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QYLAPLSIGLFCTKNAAFSFFAA*MEAVGV Trigger: CACGCCTACAGCTTCCATCAAAGCAGCGAAGAAGCT...GAAGGCAGCATTCTTGGTACAGAATAAACCGATGCTCAGAGGGGCCAGGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | AACCACAGCCATTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGTGTGGTACACCGGCTaGACAATGAGATGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: NHSHFVYHIHLPSTLVPTVWYTG*TMRWRC Trigger: GCATCTCCATCTCATTGTCAAGCCGGTGTACCACAC...GGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAATGGCTGTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTACCACATTCACCTGCCTTCCACCCTAGTCCCAACCGGCTGCACCTGAAATACCTGATGAACTaGTCAAAGACAGCAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FCLPHSPAFHPSPNRLHLKYLMN*SKTAAQ Trigger: CTGTGCTGCTGTCTTTGACAAGTTCATCAGGTATTT...CAGGTGCAGCCGGTTGGGACTAGGGTGGAAGGCAGGTGAATGTGGTAGACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS TCA 72 bp | CGGTGCCCGCGGCGTCCGCGTAGACCGGCCGCAAGCTaGCGGGCAGCCAGCGCGGGGAGAAGAGCACGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RCPRRPRRPAAS*RAASAGRRARS Trigger: GGAACGTGCTCTTCTCCCCGCGCTGGCTGCCCGTCAGCTTGCGGCCGGTCTACGCGGACGCCGCGGGCACCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | GGCGGCGTGGAACTGGTAAGCCTGCAGCAAGAGATCTaGCACCGCCGGGCCGTGGCGCGCCAGCGCGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GGVELVSLQQEI*HRRAVARQRGR Trigger: TCGGCCGCGCTGGCGCGCCACGGCCCGGCGGTGGCAGATCTCTTGCTGCAGGCTTACCAGTTCCACGCCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | CAGCGCGGCCGAGCGCGCCTGCAGCTGGAAAAGCTGTaGAGGCGGAATCATCGGGTAGCGGATGGCGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QRGRARLQLEKL*RRNHRVADGAQ Trigger: CTGCGCGCCATCCGCTACCCGATGATTCCGCCTGCACAGCTTTTCCAGCTGCAGGCGCGCTCGGCCGCGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS TCA 72 bp | GGACCTCGTCGGTGCCCACAGCCTGGACCCGCAGGATaGCATCACTGGCATTGCCCTGGCGCAGCAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRRCPQPGPAG*HHWHCPGAAGP Trigger: AGGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCATCCTGCGGGTCCAGGCTGTGGGCACCGACGAGGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | CTCCCCGCCACGGCAGAAAGGTTCCAAGCCAGGAACTaGAGGCAGCTCTCGCGCAGAGCCTCATCCCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPATAERFQARN*RQLSRRASSPV Trigger: CACCGGGGATGAGGCTCTGCGCGAGAGCTGCCTGCAGTTCCTGGCTTGGAACCTTTCTGCCGTGGCGGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 72 bp | TGGCGCAGCAGGTCCTGCAGTCGCTGGAGCAGCATGTaGGAGTGGTTGATGGCGGTGCCTGCTGCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WRSRSCSRWSSM*EWLMAVPAASP Trigger: TGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 72 bp | AGCTCACTGTGCAGCCCCAGCAACAGGCGATGGGTGTaGAAGGCTCGGACCTCGTCGGTGCCCACAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLCSPSNRRWV*KARTSSVPTAW Trigger: CCAGGCTGTGGGCACCGACGAGGTCCGAGCCTTCCACACCCATCGCCTGTTGCTGGGGCTGCACAGTGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CAA 72 bp | CCCACAGCCTGGACCCGCAGGATGACATCACTGGCATaGCCCTGGCGCAGCAGGTCCTGCAGTCGCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTAWTRRMTSLA*PWRSRSCSRWS Trigger: GCTCCAGCGACTGCAGGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCATCCTGCGGGTCCAGGCTGTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CAA 72 bp | TCGGCCACGCCTCGCTGCAAGGATGCTACTCGGTACTaGGTGGCCAGCCTGTGCAGCGGGATAGCCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SATPRCKDATRY*VASLCSGIAWA Trigger: GGCCCAGGCTATCCCGCTGCACAGGCTGGCCACCAAGTACCGAGTAGCATCCTTGCAGCGAGGCGTGGCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | CTGGAGCAGCATGTGGGAGTGGTTGATGGCGGTGCCTaGTGCCTCCCCACCCACATCGGCTCTCTGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LEQHVGVVDGGA*CLPTHIGSLSC Trigger: GCAGCTCAGAGAGCCGATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | TGCGCGCATGTAGTCGGCCACGCCTCGCTGCAAGGATaGTACTCGGTACTTGGTGGCCAGCCTGTGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CAHVVGHASLQG*YSVLGGQPVQR Trigger: CCGCTGCACAGGCTGGCCACCAAGTACCGAGTAGCATCCTTGCAGCGAGGCGTGGCCGACTACATGCGCGCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 72 bp | AGCAGGTCCTGCAGTCGCTGGAGCAGCATGTGGGAGTaGTTGATGGCGGTGCCTGCTGCCTCCCCACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRSCSRWSSMWE*LMAVPAASPPT Trigger: TGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 72 bp | GCCTGGACCCGCAGGATGACATCACTGGCATTGCCCTaGCGCAGCAGGTCCTGCAGTCGCTGGAGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: AWTRRMTSLALP*RSRSCSRWSSM Trigger: CATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCATCCTGCGGGTCCAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 72 bp | CGGAACAGCTCACTGTGCAGCCCCAGCAACAGGCGATaGGTGTGGAAGGCTCGGACCTCGTCGGTGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RNSSLCSPSNRR*VWKARTSSVPT Trigger: TGTGGGCACCGACGAGGTCCGAGCCTTCCACACCCATCGCCTGTTGCTGGGGCTGCACAGTGAGCTGTTCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CAA 72 bp | AGGTCCTGCAGTCGCTGGAGCAGCATGTGGGAGTGGTaGATGGCGGTGCCTGCTGCCTCCCCACCCACATCG | + |
|
Preference number: 6 (lower is better) Translates to: RSCSRWSSMWEW*MAVPAASPPTS Trigger: CGATGTGGGTGGGGAGGCAGCAGGCACCGCCATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | GCCTGCTGCCTCCCCACCCACATCGGCTCTCTGAGCTaGACGAGTGACCAGTCCCACCAAGGCCAGAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: ACCLPTHIGSLS*TSDQSHQGQNS Trigger: GCTATTCTGGCCTTGGTGGGACTGGTCACTCGTGCAGCTCAGAGAGCCGATGTGGGTGGGGAGGCAGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CAA 72 bp | TGCGTGGGCCAGGAAGTCGCCAGCTTCTTCGCTGCTTaGATGGAAGCTGTAGGCGTGGCGCACCAGGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CVGQEVASFFAA*MEAVGVAHQEA Trigger: CGCCTCCTGGTGCGCCACGCCTACAGCTTCCATCAAAGCAGCGAAGAAGCTGGCGACTTCCTGGCCCACGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CAA 90 bp | CTGCAGATCTGCGTGGGCCAGGAAGTCGCCAGCTTCTTCGCTGCTTaGATGGAAGCTGTAGGCGTGGCGCACCAGGAGGCGGCCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LQICVGQEVASFFAA*MEAVGVAHQEAALM Trigger: CATCAGGGCCGCCTCCTGGTGCGCCACGCCTACAGCTTCCATCAAAGCAGCGAAGAAGCTGGCGACTTCCTGGCCCACGCAGATCTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | TGCAAGGATGCTACTCGGTACTTGGTGGCCAGCCTGTaGAGCGGGATAGCCTGGGCCAGCAGTACAGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CKDATRYLVASL*SGIAWASSTVS Trigger: GCTGACTGTACTGCTGGCCCAGGCTATCCCGCTGCACAGGCTGGCCACCAAGTACCGAGTAGCATCCTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | GATCTGCGTGGGCCAGGAAGTCGCCAGCTTCTTCGCTaGTTTGATGGAAGCTGTAGGCGTGGCGCACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLRGPGSRQLLR*FDGSCRRGAPG Trigger: TCCTGGTGCGCCACGCCTACAGCTTCCATCAAAGCAGCGAAGAAGCTGGCGACTTCCTGGCCCACGCAGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | CTCCACCAGGTATTCCGAGTTGCGCCTCTGCAGATCTaGGTGGGCCAGGAAGTCGCCAGCTTCTTCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LHQVFRVAPLQI*VGQEVASFFAA Trigger: AGCAGCGAAGAAGCTGGCGACTTCCTGGCCCACGCAGATCTGCAGAGGCGCAACTCGGAATACCTGGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS TCA 72 bp | AAGAGCACGTTCCAGGTAATCCGGCGACCCGCGTCATaGCCACTGGGTCCCAACTGCGTCTGGAAACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KSTFQVIRRPAS*PLGPNCVWKLV Trigger: CACCAGTTTCCAGACGCAGTTGGGACCCAGTGGTCATGACGCGGGTCGCCGGATTACCTGGAACGTGCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | ATGACATCACTGGCATTGCCCTGGCGCAGCAGGTCCTaGAGTCGCTGGAGCAGCATGTGGGAGTGGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: MTSLALPWRSRS*SRWSSMWEWLM Trigger: CATCAACCACTCCCACATGCTGCTCCAGCGACTGCAGGACCTGCTGCGCCAGGGCAATGCCAGTGATGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | AGCGCATTCTCCACCAGGTATTCCGAGTTGCGCCTCTaGAGATCTGCGTGGGCCAGGAAGTCGCCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SAFSTRYSELRL*RSAWARKSPAS Trigger: AGAAGCTGGCGACTTCCTGGCCCACGCAGATCTGCAGAGGCGCAACTCGGAATACCTGGTGGAGAATGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS CCA 72 bp | CGGTACTTGGTGGCCAGCCTGTGCAGCGGGATAGCCTaGGCCAGCAGTACAGTCAGCTCACCACAGTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: RYLVASLCSGIA*ASSTVSSPQYK Trigger: TTTGTACTGTGGTGAGCTGACTGTACTGCTGGCCCAGGCTATCCCGCTGCACAGGCTGGCCACCAAGTACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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| CDS GCA 72 bp | AGGGTGTGGTACACCGGCTTGACAATGAGATGGAGATaGAGCGCATTCTCCACCAGGTATTCCGAGTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RVWYTGLTMRWR*SAFSTRYSELR Trigger: GCGCAACTCGGAATACCTGGTGGAGAATGCGCTGCATCTCCATCTCATTGTCAAGCCGGTGTACCACACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
||
| CDS CCA 72 bp | CGGATGAGGGTGTGGTACACCGGCTTGACAATGAGATaGAGATGCAGCGCATTCTCCACCAGGTATTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RMRVWYTGLTMR*RCSAFSTRYSE Trigger: CTCGGAATACCTGGTGGAGAATGCGCTGCATCTCCATCTCATTGTCAAGCCGGTGTACCACACCCTCATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
||
| CDS CAA 90 bp | GCCAGCAGTACAGTCAGCTCACCACAGTACAAATACCTGATGAACTaGTCAAAGACAGCAGCACAGTCCCGGGACTCCCGCAGCATAACC | + |
|
Preference number: 6 (lower is better) Translates to: ASSTVSSPQYKYLMN*SKTAAQSRDSRSIT Trigger: GGTTATGCTGCGGGAGTCCCGGGACTGTGCTGCTGTCTTTGACAAGTTCATCAGGTATTTGTACTGTGGTGAGCTGACTGTACTGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
||
| CDS CAA 72 bp | ACAGTCAGCTCACCACAGTACAAATACCTGATGAACTaGTCAAAGACAGCAGCACAGTCCCGGGACTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TVSSPQYKYLMN*SKTAAQSRDSR Trigger: GCGGGAGTCCCGGGACTGTGCTGCTGTCTTTGACAAGTTCATCAGGTATTTGTACTGTGGTGAGCTGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000206.4 |
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