Pregenerated sensors for BTBD16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040298Ensembl transcript IDs: ENSMUST00000048453.7, ENSMUST00000207219.2, ENSMUST00000208593.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGGAGGAAGAAGTGGTTCTGGAAGCAGGCTCCCAAAGCCCAGTaGTTTGGCGCTGATTCTTCTCCCAGGCCCACCTCCCACGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: HRRKKWFWKQAPKAQ*FGADSSPRPTSHGP Trigger: AGGACCGTGGGAGGTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTGCTTCCAGAACCACTTCTTCCTCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CCA 90 bp | TTGGTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCTTaGATCTCATACTTCACCAGGCGCTCCGACCTCAAGCTGATGGTA | + |
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Preference number: 1 (lower is better) Translates to: LVLNSCHLPSTSVWA*ISYFTRRSDLKLMV Trigger: TACCATCAGCTTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR CCA 90 bp | ATTTGGTTGGTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTaGGCTTGGATCTCATACTTCACCAGGCGCTCCGACCTCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: IWLVLNSCHLPSTSV*AWISYFTRRSDLKL Trigger: CAGCTTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR TCA 90 bp | TCTGGGCTTGGATCTCATACTTCACCAGGCGCTCCGACCTCAAGCTaGTGGTACTGTGCTCACAGACTGGTGAGGGGCACTCCAAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: SGLGSHTSPGAPTSS*WYCAHRLVRGTPSL Trigger: CAGACTTGGAGTGCCCCTCACCAGTCTGTGAGCACAGTACCATCAGCTTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCCAAGCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR GCA 90 bp | CGAGATCTAGTTGGTCAAGCACAGGAGATTGATGCAGCCCAGGACTaGAGCCTTGGCAGATGCCTCCATCACTTGAAGGCTGGTAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: RDLVGQAQEIDAAQD*SLGRCLHHLKAGRW Trigger: CCACCTACCAGCCTTCAAGTGATGGAGGCATCTGCCAAGGCTGCAGTCCTGGGCTGCATCAATCTCCTGTGCTTGACCAACTAGATCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CCA 90 bp | GACTGCAGCCTTGGCAGATGCCTCCATCACTTGAAGGCTGGTAGGTaGCTAATATCAGAGCAAGGACAGGCCCTGTGTTGGACCCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: DCSLGRCLHHLKAGR*LISEQGQALCWTLE Trigger: TTCCAGGGTCCAACACAGGGCCTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAAGTGATGGAGGCATCTGCCAAGGCTGCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CCA 90 bp | GAGCAACAGCATAGAAGAGTGGGACACAGGAGGAAGAAGTGGTTCTaGAAGCAGGCTCCCAAAGCCCAGTGCTTTGGCGCTGATTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: EQQHRRVGHRRKKWF*KQAPKAQCFGADSS Trigger: AGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTGCTTCCAGAACCACTTCTTCCTCCTGTGTCCCACTCTTCTATGCTGTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CCA 90 bp | TGGCTTTTGCAGCCTGGCTTGATAAACCCAAACTTTTGCATGATTTaGTTGGTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: WLLQPGLINPNFCMI*LVLNSCHLPSTSVW Trigger: CCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTGCAAAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR TCA 90 bp | AAGCTGGGGCCACAAAGGGACACAGTCACTGCAGAAAGATGCCCATaGACCCAGAGAGGTGATAGCTATCCCAATTTCTCTCCTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: KLGPQRDTVTAERCP*TQRGDSYPNFSPLL Trigger: CAGGAGAGGAGAGAAATTGGGATAGCTATCACCTCTCTGGGTTCATGGGCATCTTTCTGCAGTGACTGTGTCCCTTTGTGGCCCCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR GCA 90 bp | TTCAAGACGTGGCTTTTGCAGCCTGGCTTGATAAACCCAAACTTTTaGATGATTTGGTTGGTCCTGAACTCCTGCCACCTGCCGTCCACC | + |
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Preference number: 1 (lower is better) Translates to: FKTWLLQPGLINPNF*MIWLVLNSCHLPST Trigger: GGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTGCAAAAGCCACGTCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR TCA 90 bp | CAGGCGCTCCGACCTCAAGCTGATGGTACTGTGCTCACAGACTGGTaGGGGGCACTCCAAGTCTGTATGTTTTATTCTCTGCATAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: QALRPQADGTVLTDW*GALQVCMFYSLHRK Trigger: TTTTCTATGCAGAGAATAAAACATACAGACTTGGAGTGCCCCTCACCAGTCTGTGAGCACAGTACCATCAGCTTGAGGTCGGAGCGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR GCA 90 bp | ATCTCATACTTCACCAGGCGCTCCGACCTCAAGCTGATGGTACTGTaGTCACAGACTGGTGAGGGGCACTCCAAGTCTGTATGTTTTATT | + |
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Preference number: 1 (lower is better) Translates to: ISYFTRRSDLKLMVL*SQTGEGHSKSVCFI Trigger: AATAAAACATACAGACTTGGAGTGCCCCTCACCAGTCTGTGAGCACAGTACCATCAGCTTGAGGTCGGAGCGCCTGGTGAAGTATGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR GCA 90 bp | TTGATAAACCCAAACTTTTGCATGATTTGGTTGGTCCTGAACTCCTaGCACCTGCCGTCCACCAGCGTCTGGGCTTGGATCTCATACTTC | + |
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Preference number: 1 (lower is better) Translates to: LINPNFCMIWLVLNS*HLPSTSVWAWISYF Trigger: GAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR CCA 90 bp | TACCAACTCTCCAGGTTCTCAAAGAAAACTGGCATCACGGAGGGGTaGACAAAGGTGACCCTTTGTACAGTCCTCTCTCTTAGGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: YQLSRFSKKTGITEG*TKVTLCTVLSLRKG Trigger: CCCTTTCCTAAGAGAGAGGACTGTACAAAGGGTCACCTTTGTCCACCCCTCCGTGATGCCAGTTTTCTTTGAGAACCTGGAGAGTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CCA 90 bp | TGTCTCTCTAGCTCCCACGACTACTTCTCTTTTACTGGTCTTGAGTaGGAGCAACAGCATAGAAGAGTGGGACACAGGAGGAAGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: CLSSSHDYFSFTGLE*EQQHRRVGHRRKKW Trigger: CCACTTCTTCCTCCTGTGTCCCACTCTTCTATGCTGTTGCTCCCACTCAAGACCAGTAAAAGAGAAGTAGTCGTGGGAGCTAGAGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CCA 90 bp | CACACCTACTTCAACAGGGCCACACCTTCTAATAGTGCCACTCCCTaGGCAGAGCATATACAAACCATCACACTGACCATTATGGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: HTYFNRATPSNSATP*AEHIQTITLTIMGL Trigger: AAGCCCCATAATGGTCAGTGTGATGGTTTGTATATGCTCTGCCCAGGGAGTGGCACTATTAGAAGGTGTGGCCCTGTTGAAGTAGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR TCA 90 bp | CTAATAGTGCCACTCCCTGGGCAGAGCATATACAAACCATCACACTaGCCATTATGGGGCTTTGATACTTCATATAATTTGTACCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: LIVPLPGQSIYKPSH*PLWGFDTSYNLYLS Trigger: ACTCAGGTACAAATTATATGAAGTATCAAAGCCCCATAATGGTCAGTGTGATGGTTTGTATATGCTCTGCCCAGGGAGTGGCACTATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR TCA 90 bp | TCATATAATTTGTACCTGAGTGTCTCACTGGTCCTCACACTAATGTaGATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: SYNLYLSVSLVLTLM*IMEAMFSNIYCTVS Trigger: TGACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGTGTGAGGACCAGTGAGACACTCAGGTACAAATTATATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CAA 90 bp | GGAGGAAGAAGTGGTTCTGGAAGCAGGCTCCCAAAGCCCAGTGCTTaGGCGCTGATTCTTCTCCCAGGCCCACCTCCCACGGTCCTACCA | + |
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Preference number: 2 (lower is better) Translates to: GGRSGSGSRLPKPSA*ALILLPGPPPTVLP Trigger: TGGTAGGACCGTGGGAGGTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTGCTTCCAGAACCACTTCTTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CAA 90 bp | GTTGGTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCTaGGATCTCATACTTCACCAGGCGCTCCGACCTCAAGCTGATGGT | + |
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Preference number: 2 (lower is better) Translates to: VGPELLPPAVHQRLG*DLILHQALRPQADG Trigger: ACCATCAGCTTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCCCAAAGCCCAGTGCTTTGGCGCTGATTCTTCTCCCAGGCCCACCTCCGGCATCACGGAGGGGTaGACAAAGGTGACCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: QAPKAQCFGADSSPRPTSGITEG*TKVTLC Trigger: ACAAAGGGTCACCTTTGTCCACCCCTCCGTGATGCC...GGAGGTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCTTGGATCTCATACGAAAGATCTTTCAGGTaGACCATGTTGCCCCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: VLNSCHLPSTSVWAWISYERSFR*TMLPPL Trigger: GAGCGGGGGCAACATGGTCCACCTGAAAGATCTTTC...GTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGCTCCCAAAGCCCAGTGCTTTGGCGCTGATTCTTCTCCCAGGCCCACCTGCCCTTCTAACCTCCTaGGATTCTCTGTTGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SRLPKPSALALILLPGPPALLTS*DSLLEG Trigger: TCCTTCCAACAGAGAATCTCAGGAGGTTAGAAGGGC...AGGTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTTTGCTTGGTCCTGAACTCCTaGCACCTGCCGTCCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: SWRRSGCPRFGFSRRGFCLVLNS*HLPSTS Trigger: GCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAA...GCAAAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR CAA 90 bp | ATTGATGCAGCCCAGGACTGCAGCCTTGGCAGATGCCTCCATCACTaGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGACAGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IDAAQDCSLGRCLHH*KAGRWLISEQGQAL Trigger: CAGGGCCTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAAGTGATGGAGGCATCTGCCAAGGCTGCAGTCCTGGGCTGCATCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CAA 90 bp | CTTTTGCAGCCTGGCTTGATAAACCCAAACTTTTGCATGATTTGGTaGGTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LLQPGLINPNFCMIW*VLNSCHLPSTSVWA Trigger: AGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTGCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR CAA 90 bp | GTGGCTTTTGCAGCCTGGCTTGATAAACCCAAACTTTTGCATGATTaGGTTGGTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTG | + |
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Preference number: 2 (lower is better) Translates to: VAFAAWLDKPKLLHD*VGPELLPPAVHQRL Trigger: CAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTGCAAAAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAAGCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTAACTCAGCACTGAGATaGCTCACTCTCGAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GKAGVDRDAHGLDFQDVANSALR*LTLELL Trigger: AAGGAGCTCGAGAGTGAGGCATCTCAGTGCTGAGTT...AGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCTTGGATCTCATACAAAAATCATGTCTATTaGAAGCCCAAGACAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: VLNSCHLPSTSVWAWISYKNHVY*KPKTGH Trigger: GTGCCCTGTCTTGGGCTTGCAATAGACATGATTTTT...GTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGACAGGCCCTGTGTTGGACCAGGATCAGAGAAAGCTaGGGCCACAAAGGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: LKAGRWLISEQGQALCWTRIRES*GHKGTQ Trigger: CTGTGTCCCTTTGTGGCCCCAGCTTTCTCTGATCCT...GGTCCAACACAGGGCCTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR CAA 90 bp | TGGGAAGATGAAGGCAAAGCTGGCGTAGATCGGGATGCCCACGGTTaGGATTTTCAAGACGTGGCTTTTGCAGCCTGGCTTGATAAACCC | + |
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Preference number: 2 (lower is better) Translates to: WEDEGKAGVDRDAHG*DFQDVAFAAWLDKP Trigger: GGGTTTATCAAGCCAGGCTGCAAAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCTTTGCCTTCATCTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR CCA 90 bp | CGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTTTGCAGCCTGACCTCATGGCCTGTGTaGAAAGATCTTTCAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RRSGCPRFGFSRRGFCSLTSWPV*KDLSGG Trigger: TCCACCTGAAAGATCTTTCCACACAGGCCATGAGGT...CAGGCTGCAAAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR CAA 90 bp | TCTCCTGTCTCTCTAGCTCCCACGACTACTTCTCTTTTACTGGTCTaGAGTGGGAGCAACAGCATAGAAGAGTGGGACACAGGAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SPVSLAPTTTSLLLV*SGSNSIEEWDTGGR Trigger: TCTTCCTCCTGTGTCCCACTCTTCTATGCTGTTGCTCCCACTCAAGACCAGTAAAAGAGAAGTAGTCGTGGGAGCTAGAGAGACAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR-3UTR TCA 90 bp | CCCAAACTTTTGCATGATTTGGTTGGTCCTGAACTCCTGCCACCTGCCGTCCACTTTTTATTTCTCTTATaGAGTCAGGCCGGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PKLLHDLVGPELLPPAVHFLFLL*SQAGQG Trigger: TCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAA...GTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGGCTTGATAAACCCAAACTTTTGCATGATTTGGTTGGTCCTGAACTCCGCAGCCCGAACCTCATaGCCTGTGTGGAAAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: QPGLINPNFCMIWLVLNSAARTS*PVWKDL Trigger: AAGATCTTTCCACACAGGCCATGAGGTTCGGGCTGC...GGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR TCA 90 bp | AGATGCCTCCATCACTTGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGACAGAAAGGGTGCAGTGTGTaGCTTAACTTCGAAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: RCLHHLKAGRWLISEQGQKGCSV*LNFETR Trigger: TCTGGTTTCGAAGTTAAGTCACACACTGCACCCTTT...CTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAAGTGATGGAGGCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCACACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTCCAGTGCTTTGGCGCTaGTTCTTCTCCCAGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PHTNVNYGGHVFQYLLHCPVLWR*FFSQAH Trigger: GTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGG...ACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGTGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTTTCCTTTCCGAGTAAGTaGTGTATTCCTTTGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: QSWRRSGCPRFGFSRRGFSFPSK*CIPLRS Trigger: ACTTCTCAAAGGAATACACCACTTACTCGGAAAGGA...AAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCACACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTCCTGAGATTCTCTGTTaGAAGGAAGACTCCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PHTNVNYGGHVFQYLLHCPEILC*KEDSLS Trigger: GCTGAGGGAGTCTTCCTTCCAACAGAGAATCTCAGG...ACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGTGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR-3UTR CCA 90 bp | ACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTGTCATACACAGGAGGAAGAAGTaGTTCTGGAAGCAGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TNVNYGGHVFQYLLHCVIHRRKK*FWKQAP Trigger: GGGAGCCTGCTTCCAGAACCACTTCTTCCTCCTGTG...TATGACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR-3UTR CCA 90 bp | ACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTGTCATATTTACTGGTCTTGAGTaGGAGCAACAGCATAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TNVNYGGHVFQYLLHCVIFTGLE*EQQHRR Trigger: TCTTCTATGCTGTTGCTCCCACTCAAGACCAGTAAA...TATGACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR TCA 72 bp | CTGGAAGCAGGCTCCCAAAGCCCAGTGCTTTGGCGCTaGTTCTTCTCCCAGGCCCACCTCCCACGGTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LEAGSQSPVLWR*FFSQAHLPRSY Trigger: GTAGGACCGTGGGAGGTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTGCTTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
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| 3UTR TCA 72 bp | CAGCCGCCAACCCCAGACCCTGTCCCAACTCAGCACTaGGATGCCTCACTCTCGAGCTCCTTGACCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: QPPTPDPVPTQH*DASLSSSLTSQ Trigger: CTGGCTGGTCAAGGAGCTCGAGAGTGAGGCATCTCAGTGCTGAGTTGGGACAGGGTCTGGGGTTGGCGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR CCA 72 bp | GTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTaGGCTTGGATCTCATACTTCACCAGGCGCTCCGAC | + |
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Preference number: 3 (lower is better) Translates to: VLNSCHLPSTSV*AWISYFTRRSD Trigger: GTCGGAGCGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR CCA 72 bp | AACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCTTaGATCTCATACTTCACCAGGCGCTCCGACCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: NSCHLPSTSVWA*ISYFTRRSDLK Trigger: CTTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR GCA 72 bp | GCCAACCCCAGACCCTGTCCCAACTCAGCACTGAGATaGCTCACTCTCGAGCTCCTTGACCAGCCAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: ANPRPCPNSALR*LTLELLDQPGF Trigger: AAACCCTGGCTGGTCAAGGAGCTCGAGAGTGAGGCATCTCAGTGCTGAGTTGGGACAGGGTCTGGGGTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTTTGCATTCAGGTGGACCATGTaGCCCCCGCTCTCCAGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: AGVDRDAHGLDFQDVAFAFRWTM*PPLSSA Trigger: CGCACTGGAGAGCGGGGGCAACATGGTCCACCTGAA...TGCAAAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR TCA 72 bp | CCACCTCCCACGGTCCTACCAGCCCTTCTAACCTCCTaGGATTCTCTGTTGGAAGGAAGACTCCCTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPPTVLPALLTS*DSLLEGRLPQL Trigger: CAGCTGAGGGAGTCTTCCTTCCAACAGAGAATCTCAGGAGGTTAGAAGGGCTGGTAGGACCGTGGGAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR TCA 72 bp | GGATCTCATACTTCACCAGGCGCTCCGACCTCAAGCTaGTGGTACTGTGCTCACAGACTGGTGAGGGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: GSHTSPGAPTSS*WYCAHRLVRGT Trigger: AGTGCCCCTCACCAGTCTGTGAGCACAGTACCATCAGCTTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR GCA 72 bp | TGGCCTGTGTGGAAAGATCTTTCAGGTGGACCATGTTaGCCCCGCTCTCCAGTGCGTGGTAATGGTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WPVWKDLSGGPC*PRSPVRGNGWL Trigger: CAGCCAACCATTACCACGCACTGGAGAGCGGGGGCAACATGGTCCACCTGAAAGATCTTTCCACACAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR GCA 72 bp | CCAAACTTTTGCATGATTTGGTTGGTCCTGAACTCCTaGCACCTGCCGTCCACCAGCGTCTGGGCTTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: PNFCMIWLVLNS*HLPSTSVWAWI Trigger: GATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR CCA 72 bp | CATAGAAGAGTGGGACACAGGAGGAAGAAGTGGTTCTaGAAGCAGGCTCCCAAAGCCCAGTGCTTTGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: HRRVGHRRKKWF*KQAPKAQCFGA Trigger: AGCGCCAAAGCACTGGGCTTTGGGAGCCTGCTTCCAGAACCACTTCTTCCTCCTGTGTCCCACTCTTCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR TCA 72 bp | GATGAAGCGAGATCTAGTTGGTCAAGCACAGGAGATTaGTGCAGCCCAGGACTGCAGCCTTGGCAGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DEARSSWSSTGD*CSPGLQPWQMP Trigger: AGGCATCTGCCAAGGCTGCAGTCCTGGGCTGCATCAATCTCCTGTGCTTGACCAACTAGATCTCGCTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR GCA 72 bp | GAGATTGATGCAGCCCAGGACTGCAGCCTTGGCAGATaGCTCCATCACTTGAAGGCTGGTAGGTGGCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: EIDAAQDCSLGR*LHHLKAGRWLI Trigger: TATTAGCCACCTACCAGCCTTCAAGTGATGGAGGCATCTGCCAAGGCTGCAGTCCTGGGCTGCATCAATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR CCA 72 bp | CTTGGCAGATGCCTCCATCACTTGAAGGCTGGTAGGTaGCTAATATCAGAGCAAGGACAGGCCCTGTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGRCLHHLKAGR*LISEQGQALCW Trigger: CCAACACAGGGCCTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAAGTGATGGAGGCATCTGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR CCA 72 bp | CAGCCTGGCTTGATAAACCCAAACTTTTGCATGATTTaGTTGGTCCTGAACTCCTGCCACCTGCCGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QPGLINPNFCMI*LVLNSCHLPST Trigger: GGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACTCCCTCAGCTGTGTGCCATCCCACACCAGACATTAGGTAGGCTGGACGTAGAAAACGGAAGCAGATaGGCACTAAACTCTAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLPQLCAIPHQTLGRLDVENGSR*ALNSNA Trigger: GGCATTAGAGTTTAGTGCCAATCTGCTTCCGTTTTC...TACGTCCAGCCTACCTAATGTCTGGTGTGGGATGGCACACAGCTGAGGGAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR TCA 72 bp | CAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATaGAAGCTATCAAGATGCTGGGAAGATGAAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QAGQGRGSHRFL*KLSRCWEDEGK Trigger: TTTGCCTTCATCTTCCCAGCATCTTGATAGCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR CCA 72 bp | AGCTCCCACGACTACTTCTCTTTTACTGGTCTTGAGTaGGAGCAACAGCATAGAAGAGTGGGACACAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSHDYFSFTGLE*EQQHRRVGHRR Trigger: CCTCCTGTGTCCCACTCTTCTATGCTGTTGCTCCCACTCAAGACCAGTAAAAGAGAAGTAGTCGTGGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR TCA 72 bp | CAAAGAAAACTGGCATCACGGAGGGGTGGACAAAGGTaGCCCTTTGTACAGTCCTCTCTCTTAGGAAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QRKLASRRGGQR*PFVQSSLLGKG Trigger: ACCCTTTCCTAAGAGAGAGGACTGTACAAAGGGTCACCTTTGTCCACCCCTCCGTGATGCCAGTTTTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR TCA 72 bp | CGACCTCAAGCTGATGGTACTGTGCTCACAGACTGGTaGGGGGCACTCCAAGTCTGTATGTTTTATTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPQADGTVLTDW*GALQVCMFYSL Trigger: CAGAGAATAAAACATACAGACTTGGAGTGCCCCTCACCAGTCTGTGAGCACAGTACCATCAGCTTGAGGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR CCA 72 bp | TCCAGGTTCTCAAAGAAAACTGGCATCACGGAGGGGTaGACAAAGGTGACCCTTTGTACAGTCCTCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SRFSKKTGITEG*TKVTLCTVLSL Trigger: AAGAGAGAGGACTGTACAAAGGGTCACCTTTGTCCACCCCTCCGTGATGCCAGTTTTCTTTGAGAACCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTTGAGGTAGGGTCGTGTTaGATTCCCTTTATCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSWRRSGCPRFGFSRRGFEVGSC*IPFISK Trigger: CTTTGAGATAAAGGGAATCAAACACGACCCTACCTC...AAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR GCA 72 bp | TGGCTTTTGCAGCCTGGCTTGATAAACCCAAACTTTTaGATGATTTGGTTGGTCCTGAACTCCTGCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WLLQPGLINPNF*MIWLVLNSCHL Trigger: CAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTGCAAAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR CCA 72 bp | TTCAACAGGGCCACACCTTCTAATAGTGCCACTCCCTaGGCAGAGCATATACAAACCATCACACTGACCATT | + |
|
Preference number: 3 (lower is better) Translates to: FNRATPSNSATP*AEHIQTITLTI Trigger: AATGGTCAGTGTGATGGTTTGTATATGCTCTGCCCAGGGAGTGGCACTATTAGAAGGTGTGGCCCTGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR-3UTR CAA 90 bp | CACACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTGTCAGGACAGGCCCTGTGTaGGACCCTGGAAGGATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HTNVNYGGHVFQYLLHCVRTGPV*DPGRME Trigger: TTCCATCCTTCCAGGGTCCAACACAGGGCCTGTCCT...GACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR TCA 72 bp | CCACTCCCTGGGCAGAGCATATACAAACCATCACACTaGCCATTATGGGGCTTTGATACTTCATATAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLPGQSIYKPSH*PLWGFDTSYNL Trigger: CAAATTATATGAAGTATCAAAGCCCCATAATGGTCAGTGTGATGGTTTGTATATGCTCTGCCCAGGGAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR TCA 72 bp | TTGTACCTGAGTGTCTCACTGGTCCTCACACTAATGTaGATTATGGAGGCCATGTTTTCCAATATCTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: LYLSVSLVLTLM*IMEAMFSNIYC Trigger: GCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGTGTGAGGACCAGTGAGACACTCAGGTACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR TCA 90 bp | TGCAAGCCCAAGACAGGGCACAGCCGCCAACCCCAGACCCTGTCCCAACTCAGCTTGAACTGGAGGATGTaGGCAGAAGCCAGCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CKPKTGHSRQPQTLSQLSLNWRM*AEASTP Trigger: GGGCGTGCTGGCTTCTGCTCACATCCTCCAGTTCAA...GCTGAGTTGGGACAGGGTCTGGGGTTGGCGGCTGTGCCCTGTCTTGGGCTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| 3UTR CAA 72 bp | AGTGGTTCTGGAAGCAGGCTCCCAAAGCCCAGTGCTTaGGCGCTGATTCTTCTCCCAGGCCCACCTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SGSGSRLPKPSA*ALILLPGPPPT Trigger: CGTGGGAGGTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTGCTTCCAGAACCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR CAA 72 bp | GAACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCTaGGATCTCATACTTCACCAGGCGCTCCGACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ELLPPAVHQRLG*DLILHQALRPQ Trigger: TTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCACCTGCCGTCCACCAGCGTCTGGGCTTGGATCTCATACTTCACCAGGCGAGGGACCAGGTTCATTaGCAGCCACTTCTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPAVHQRLGLDLILHQARDQVH*QPLLTG Trigger: GCCTGTGAGAAGTGGCTGGCAATGAACCTGGTCCCT...CGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR GCA 90 bp | TGCCACCTGCCGTCCACCAGCGTCTGGGCTTGGATCTCATACTTCACCAGGCGCGGCAACTCTGGTGACTaGCGGGTCATTGATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CHLPSTSVWAWISYFTRRGNSGD*RVIDPH Trigger: ATGAGGATCAATGACCCGGCAGTCACCAGAGTTGCC...GCGCCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGGCAGGTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAAGCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTGTCGGAGGTGGATCTaGGTCCCCACTAGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GKAGVDRDAHGLDFQDVACRRWI*VPTRGT Trigger: GGTCCCTCTAGTGGGGACTCAGATCCACCTCCGACA...AGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCTTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAAGGACAGGCCCTGTGTTGGACCCTGGAAGGATGGAAGGAAACTTCAGTTGGTCCTGAACTCCTaGCACCTGCCGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSKDRPCVGPWKDGRKLQLVLNS*HLPSTS Trigger: GCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAA...CTGAAGTTTCCTTCCATCCTTCCAGGGTCCAACACAGGGCCTGTCCTTGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR TCA 90 bp | TTGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGACAGGCCCTGTGTTGGACCTGTCGGAGGTGGATCTaGGTCCCCACTAGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LKAGRWLISEQGQALCWTCRRWI*VPTRGT Trigger: GGTCCCTCTAGTGGGGACTCAGATCCACCTCCGACA...GGTCCAACACAGGGCCTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCTCCCAAAGCCCAGTGCTTTGGCGCTGATTCTTCTCCCAGGCCCACCTAAGATGCTGGGAAGATaGAGGCAAAGCTGGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLPKPSALALILLPGPPKMLGR*RQSWRR Trigger: TCTACGCCAGCTTTGCCTTCATCTTCCCAGCATCTT...AGGTGGGCCTGGGAGAAGAATCAGCGCCAAAGCACTGGGCTTTGGGAGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR CAA 72 bp | GCCCAGGACTGCAGCCTTGGCAGATGCCTCCATCACTaGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQDCSLGRCLHH*KAGRWLISEQG Trigger: TCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAAGTGATGGAGGCATCTGCCAAGGCTGCAGTCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR GCA 90 bp | AGCCGCCAACCCCAGACCCTGTCCCAACTCAGCACTGAGATGCCTCACTCTCGACTTGATGGTGCTTGGTaGGAGTCTGTTCATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRQPQTLSQLSTEMPHSRLDGAW*ESVHHH Trigger: ATGATGATGAACAGACTCGCACCAAGCACCATCAAG...TCGAGAGTGAGGCATCTCAGTGCTGAGTTGGGACAGGGTCTGGGGTTGGCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCAAATGGAAGGAAGGATCAGAGAAAGCTGGGGCCACAAAGGGACACAGTCCCACTGGTGATGCCGTaGAGACGCAGGCAAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VANGRKDQRKLGPQRDTVPLVMP*RRRQRK Trigger: CTTCCTTTGCCTGCGTCTGCACGGCATCACCAGTGG...GACTGTGTCCCTTTGTGGCCCCAGCTTTCTCTGATCCTTCCTTCCATTTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTCCGCAGAAATGGTCTTaGGGAAAACGCCATCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKAGVDRDAHGLDFQDVAPQKWS*GKRHRL Trigger: CAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGG...AGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCTTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAAGGACAGGCCCTGTGTTGGACCCTGGAAGGATGGAAGGAAACTTCAGGAAAGATCTTTCAGGTaGACCATGTTGCCCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSKDRPCVGPWKDGRKLQERSFR*TMLPPL Trigger: GAGCGGGGGCAACATGGTCCACCTGAAAGATCTTTC...CTGAAGTTTCCTTCCATCCTTCCAGGGTCCAACACAGGGCCTGTCCTTGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR CAA 72 bp | GAAGGCAAAGCTGGCGTAGATCGGGATGCCCACGGTTaGGATTTTCAAGACGTGGCTTTTGCAGCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGKAGVDRDAHG*DFQDVAFAAWL Trigger: AAGCCAGGCTGCAAAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCTTTGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR GCA 90 bp | TATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATTTGGTCCTGAACTCCTaGCACCTGCCGTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSYEVRPAREGDPIDSYLVLNS*HLPSTS Trigger: GCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAA...ATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | CACGGTCCTACCAGCCCTTCTAACCTCCTGAGATTCTCTGTTGGAAGGAAGACTCCGTCCACCAGCGTCTaGGCTTGGATCTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HGPTSPSNLLRFSVGRKTPSTSV*AWISYF Trigger: GAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGG...AGTCTTCCTTCCAACAGAGAATCTCAGGAGGTTAGAAGGGCTGGTAGGACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAAGGACAGGCCCTGTGTTGGACCCTGGAAGGATGGAAGGAAACTTCAGGGGATGCCCACGGTTTaGATTTTCAAGACGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSKDRPCVGPWKDGRKLQGMPTV*IFKTWL Trigger: AAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCC...CTGAAGTTTCCTTCCATCCTTCCAGGGTCCAACACAGGGCCTGTCCTTGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR CAA 72 bp | GCAGCCTGGCTTGATAAACCCAAACTTTTGCATGATTaGGTTGGTCCTGAACTCCTGCCACCTGCCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAWLDKPKLLHD*VGPELLPPAVH Trigger: GTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR TCA 90 bp | TATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATTTGAACTGGAGGATGTaGGCAGAAGCCAGCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFSYEVRPAREGDPIDSYLNWRM*AEASTP Trigger: GGGCGTGCTGGCTTCTGCTCACATCCTCCAGTTCAA...ATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGACAGGCCCTGTGTTGGACCCCAAGTAGAAGTTCTTaGTGGTGCTTGGTGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKAGRWLISEQGQALCWTPSRSS*WCLVRV Trigger: GACTCGCACCAAGCACCATCAAGAACTTCTACTTGG...GGTCCAACACAGGGCCTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR TCA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTGTCGGAGGTGGATCTaGGTCCCCACTAGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HFYFSYEVRPAREGDPIDCRRWI*VPTRGT Trigger: GGTCCCTCTAGTGGGGACTCAGATCCACCTCCGACA...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCGGCAACTCTGGTGACTaGCGGGTCATTGATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESGNSGD*RVIDPH Trigger: ATGAGGATCAATGACCCGGCAGTCACCAGAGTTGCC...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCAAGCTGATGGTACTGTaGTCACAGACTGGTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESKLMVL*SQTGEG Trigger: CCCCTCACCAGTCTGTGAGCACAGTACCATCAGCTT...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCGTAGATCGGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTTTGCAGGTCTCCGCAGAAATaGTCTTGGGGAAAACGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWRRSGCPRFGFSRRGFCRSPQK*SWGKRH Trigger: ATGGCGTTTTCCCCAAGACCATTTCTGCGGAGACCT...GCAAAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCGATCTACGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCGAAAGATCTTTCAGGTaGACCATGTTGCCCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESERSFR*TMLPPL Trigger: GAGCGGGGGCAACATGGTCCACCTGAAAGATCTTTC...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATATTGAACTGGAGGATGTaGGCAGAAGCCAGCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CHFYFSYEVRPAREGDPILNWRM*AEASTP Trigger: GGGCGTGCTGGCTTCTGCTCACATCCTCCAGTTCAA...TATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR TCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCAAGATGCTGGGAAGATaGAGGCAAAGCTGGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESKMLGR*RQSWRR Trigger: TCTACGCCAGCTTTGCCTTCATCTTCCCAGCATCTT...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAGGCAACTCTGGTGACTaGCGGGTCATTGATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSYEVRPAREGDPIDSYEGNSGD*RVIDPH Trigger: ATGAGGATCAATGACCCGGCAGTCACCAGAGTTGCC...TTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | AGACTCCCTCAGCTGTGTGCCATCCCACACCAGACATTAGGTAGGCTGGACGTACTTGATGGTGCTTGGTaGGAGTCTGTTCATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLPQLCAIPHQTLGRLDVLDGAW*ESVHHH Trigger: ATGATGATGAACAGACTCGCACCAAGCACCATCAAG...TACGTCCAGCCTACCTAATGTCTGGTGTGGGATGGCACACAGCTGAGGGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR GCA 90 bp | TGTCATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATACCACTGGTGATGCCGTaGAGACGCAGGCAAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CHFYFSYEVRPAREGDPIPLVMP*RRRQRK Trigger: CTTCCTTTGCCTGCGTCTGCACGGCATCACCAGTGG...TATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGAGCTGAGAGTTCTACATCTTCATCGTCTTCATCTGAAGGCTGCTAGCCCGCAGAAATGGTCTTaGGGAAAACGCCATCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEELRVLHLHRLHLKAASPQKWS*GKRHRL Trigger: CAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGG...GCTAGCAGCCTTCAGATGAAGACGATGAAGATGTAGAACTCTCAGCTCCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAACCGCAGAAATGGTCTTaGGGAAAACGCCATCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSYEVRPAREGDPIDSYEPQKWS*GKRHRL Trigger: CAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGG...TTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAACCAGCGTCTGGGCTTaGATCTCATACTTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSYEVRPAREGDPIDSYETSVWA*ISYFTR Trigger: CCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGT...TTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | TATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATCCGTCCACCAGCGTCTaGGCTTGGATCTCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSYEVRPAREGDPIDSYPSTSV*AWISYF Trigger: GAAGTATGAGATCCAAGCCCAGACGCTGGTGGACGG...ATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATAGGGACCAGGTTCATTaGCAGCCACTTCTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFYFSYEVRPAREGDPIDRDQVH*QPLLTG Trigger: GCCTGTGAGAAGTGGCTGGCAATGAACCTGGTCCCT...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | TATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATAAGCTGATGGTACTGTaGTCACAGACTGGTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YFSYEVRPAREGDPIDSYKLMVL*SQTGEG Trigger: CCCCTCACCAGTCTGTGAGCACAGTACCATCAGCTT...ATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCCTCCATCACTTGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGACAGTGGCGTAGATCGGGATaGCCACGGTTTGGATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCLHHLKAGRWLISEQGQWRRSG*PRFGFS Trigger: TGAAAATCCAAACCGTGGGCATCCCGATCTACGCCA...CTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAAGTGATGGAGGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAATGGCGTAGATCGGGATaGCCACGGTTTGGATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSYEVRPAREGDPIDSYEWRRSG*PRFGFS Trigger: TGAAAATCCAAACCGTGGGCATCCCGATCTACGCCA...TTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCCTGTCAGGTAGAGCTTaGCCAAGGTCCCAGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FYFSYEVRPAREGDPIDSLSGRA*PRSQTE Trigger: TTCAGTCTGGGACCTTGGCCAAGCTCTACCTGACAG...GGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCTTGTCCAGCTCCCTCTaGGAGCTTTTCATGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESLSSSL*ELFMFC Trigger: ACAGAACATGAAAAGCTCCCAGAGGGAGCTGGACAA...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | CACGGTCCTACCAGCCCTTCTAACCTCCTGAGATTCTCTGTTGGAAGGAAGACTACCTCATGGCCTGTGTaGAAAGATCTTTCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGPTSPSNLLRFSVGRKTTSWPV*KDLSGG Trigger: TCCACCTGAAAGATCTTTCCACACAGGCCATGAGGT...AGTCTTCCTTCCAACAGAGAATCTCAGGAGGTTAGAAGGGCTGGTAGGACCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCGCAGCCCGAACCTCATaGCCTGTGTGGAAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYFSYEVRPAREGDPIDSAARTS*PVWKDL Trigger: AAGATCTTTCCACACAGGCCATGAGGTTCGGGCTGC...GGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | TACAGGTTCAGAGGTTCAGTCCATTATTATCAAGGCGGGAACATGGCAGCATCCTGTCACCGGCCTTCTTaGGAAAGGATCCACTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: YRFRGSVHYYQGGNMAASCHRPS*ERIHLL Trigger: CAGTAAGTGGATCCTTTCGCAAGAAGGCCGGTGACA...GGATGCTGCCATGTTCCCGCCTTGATAATAATGGACTGAACCTCTGAACCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCAAAACATTGCACATCTaGGAGAGTGCCAACAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESKTLHI*ESANRS Trigger: AGACCTGTTGGCACTCTCCCAGATGTGCAATGTTTT...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | TGTCATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATACTGTCAGGTAGAGCTTaGCCAAGGTCCCAGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHFYFSYEVRPAREGDPILSGRA*PRSQTE Trigger: TTCAGTCTGGGACCTTGGCCAAGCTCTACCTGACAG...TATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATACCAGCGTCTGGGCTTaGATCTCATACTTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFYFSYEVRPAREGDPIDTSVWA*ISYFTR Trigger: CCTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGT...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| 3UTR CAA 72 bp | GGGATGCCCACGGTTTGGATTTTCAAGACGTGGCTTTaGCAGCCTGGCTTGATAAACCCAAACTTTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GMPTVWIFKTWL*QPGLINPNFCM Trigger: CATGCAAAAGTTTGGGTTTATCAAGCCAGGCTGCAAAAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGCTTGATAAACCCAAACTTTTGCATGATTTGGTTGGTCCTGAACTCCCCAAGTAGAAGTTCTTaGTGGTGCTTGGTGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPGLINPNFCMIWLVLNSPSRSS*WCLVRV Trigger: GACTCGCACCAAGCACCATCAAGAACTTCTACTTGG...GGAGTTCAGGACCAACCAAATCATGCAAAAGTTTGGGTTTATCAAGCCAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR GCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCGGGAAGAAATTAATGTaGTTCAACACCTCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESGKKLM*FNTSRS Trigger: GGATCTGGAGGTGTTGAAGCACATTAATTTCTTCCC...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCACAGACTGGTGAGGGGCACTCCAAGTCTGTATGTTTTATTCTCTGCAAAACATTGCACATCTaGGAGAGTGCCAACAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSQTGEGHSKSVCFILCKTLHI*ESANRS Trigger: AGACCTGTTGGCACTCTCCCAGATGTGCAATGTTTT...GCAGAGAATAAAACATACAGACTTGGAGTGCCCCTCACCAGTCTGTGAGCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGTTGGACCCTGGAAGGATGGAAGGAAACTTCAGGGTAGCAAATGGAAGGAACTTTTGCATGATTTaGTTGGTCCTGAACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLDPGRMEGNFRVANGRNFCMI*LVLNSC Trigger: GCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTT...CCTTCCATTTGCTACCCTGAAGTTTCCTTCCATCCTTCCAGGGTCCAACACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCAACTTTTGCATGATTTaGTTGGTCCTGAACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESNFCMI*LVLNSC Trigger: GCAGGAGTTCAGGACCAACCAAATCATGCAAAAGTT...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATGGGATGCCCACGGTTTaGATTTTCAAGACGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFYFSYEVRPAREGDPIDGMPTV*IFKTWL Trigger: AAGCCACGTCTTGAAAATCCAAACCGTGGGCATCCC...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCCTACATTTAAAACATTaGACATCTGGGAGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYEVRPAREGDPIDSYESLHLKH*TSGRVP Trigger: TGGCACTCTCCCAGATGTGCAATGTTTTAAATGTAG...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGAGTTCTACATCTTCATCGTCTTCATCTGAAGGCTGCTAGCAGAAAAAGGTCTCCGCAGAAATaGTCTTGGGGAAAACGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELRVLHLHRLHLKAASRKRSPQK*SWGKRH Trigger: ATGGCGTTTTCCCCAAGACCATTTCTGCGGAGACCT...TTTTCTGCTAGCAGCCTTCAGATGAAGACGATGAAGATGTAGAACTCTCAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTTGTCCAGCTCCCTCTaGGAGCTTTTCATGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HFYFSYEVRPAREGDPIDLSSSL*ELFMFC Trigger: ACAGAACATGAAAAGCTCCCAGAGGGAGCTGGACAA...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAAGGTTTTCAGGAGATaGAACTCACTGAAGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSYEVRPAREGDPIDSYEKVFRR*NSLKVN Trigger: GTTCACCTTCAGTGAGTTCCATCTCCTGAAAACCTT...TTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CCA 90 bp | TGTCATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAACCTCATGGCCTGTGTaGAAAGATCTTTCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHFYFSYEVRPAREGDPITSWPV*KDLSGG Trigger: TCCACCTGAAAGATCTTTCCACACAGGCCATGAGGT...TATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAACTACATTTAAAACATTaGACATCTGGGAGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSYEVRPAREGDPIDSYELHLKH*TSGRVP Trigger: TGGCACTCTCCCAGATGTGCAATGTTTTAAATGTAG...TTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATCTTGATGGTGCTTGGTaGGAGTCTGTTCATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFYFSYEVRPAREGDPIDLDGAW*ESVHHH Trigger: ATGATGATGAACAGACTCGCACCAAGCACCATCAAG...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | CACACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTGTCAGGGACCAGGTTCATTaGCAGCCACTTCTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTNVNYGGHVFQYLLHCVRDQVH*QPLLTG Trigger: GCCTGTGAGAAGTGGCTGGCAATGAACCTGGTCCCT...GACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | TCCAATATCTATTGCACTGTGTCATATGTGTCTCCAACACTACCAAACCATTCCCTGTCAGGTAGAGCTTaGCCAAGGTCCCAGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNIYCTVSYVSPTLPNHSLSGRA*PRSQTE Trigger: TTCAGTCTGGGACCTTGGCCAAGCTCTACCTGACAG...GGAATGGTTTGGTAGTGTTGGAGACACATATGACACAGTGCAATAGATATTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR GCA 90 bp | TTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCCTACATTTAAAACATTaGACATCTGGGAGAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYFSYEVRPAREGDPIDSLHLKH*TSGRVP Trigger: TGGCACTCTCCCAGATGTGCAATGTTTTAAATGTAG...GGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGGGTCGTGTTTGATTCCCTTTATCTCAAAGAAGTATCCGTATATAGAAATTGTCACCGGCCTTCTTaGGAAAGGATCCACTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVVFDSLYLKEVSVYRNCHRPS*ERIHLL Trigger: CAGTAAGTGGATCCTTTCGCAAGAAGGCCGGTGACA...ATTTCTATATACGGATACTTCTTTGAGATAAAGGGAATCAAACACGACCCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGTTTTCCAATATCTATTGCACTGTGTCATATGTGTCTCCAACACTACCAAAGGTTTTCAGGAGATaGAACTCACTGAAGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AMFSNIYCTVSYVSPTLPKVFRR*NSLKVN Trigger: GTTCACCTTCAGTGAGTTCCATCTCCTGAAAACCTT...TGGTAGTGTTGGAGACACATATGACACAGTGCAATAGATATTGGAAAACATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CCA 90 bp | ACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTGTCATAAAAACATTGCACATCTaGGAGAGTGCCAACAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNVNYGGHVFQYLLHCVIKTLHI*ESANRS Trigger: AGACCTGTTGGCACTCTCCCAGATGTGCAATGTTTT...TATGACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR GCA 90 bp | ACTAATGTGAATTATGGAGGCCATGTTTTCCAATATCTATTGCACTGTGTCATAGGGAAGAAATTAATGTaGTTCAACACCTCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TNVNYGGHVFQYLLHCVIGKKLM*FNTSRS Trigger: GGATCTGGAGGTGTTGAAGCACATTAATTTCTTCCC...TATGACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| 3UTR CAA 72 bp | AATGTGAATTATGGAGGCCATGTTTTCCAATATCTATaGCACTGTGTCATATGTGTCTCCAACACTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NVNYGGHVFQYL*HCVICVSNTTK Trigger: TTTGGTAGTGTTGGAGACACATATGACACAGTGCAATAGATATTGGAAAACATGGCCTCCATAATTCACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAAGGACAGGCCCTGTGTTGGACCCTGGAAGGATGGAAGGAAACTTCAGTTCAGGTGGACCATGTaGCCCCCGCTCTCCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QSKDRPCVGPWKDGRKLQFRWTM*PPLSSA Trigger: CGCACTGGAGAGCGGGGGCAACATGGTCCACCTGAA...CTGAAGTTTCCTTCCATCCTTCCAGGGTCCAACACAGGGCCTGTCCTTGCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CAA 90 bp | GCTTGGATCTCATACTTCACCAGGCGCTCCGACCTCAAGCTGATGGTACTGTGCGAGGGACCAGGTTCATaGCCAGCCACTTCTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWISYFTRRSDLKLMVLCEGPGS*PATSHR Trigger: CCTGTGAGAAGTGGCTGGCAATGAACCTGGTCCCTC...GCACAGTACCATCAGCTTGAGGTCGGAGCGCCTGGTGAAGTATGAGATCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCCCTCAGCTGTGTGCCATCCCACACCAGACATTAGGTAGGCTGGACGTAGGCGACTTCAGCACCTaGTACAGCAGAGGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPQLCAIPHQTLGRLDVGDFST*YSRGSG Trigger: CCCTGAACCTCTGCTGTACAAGGTGCTGAAGTCGCC...TACGTCCAGCCTACCTAATGTCTGGTGTGGGATGGCACACAGCTGAGGGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CAA 90 bp | GAACCTCATGGCCTGTGTGGAAAGATCTTTCAGGTGGACCATGTTGCCCCCGCTGGCGACTTCAGCACCTaGTACAGCAGAGGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPHGLCGKIFQVDHVAPAGDFST*YSRGSG Trigger: CCCTGAACCTCTGCTGTACAAGGTGCTGAAGTCGCC...AGCGGGGGCAACATGGTCCACCTGAAAGATCTTTCCACACAGGCCATGAGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS TCA 90 bp | AGCACCTTGTACAGCAGAGGTTCAGGGATCTGTCGGAGGTGGATCTaGGTCCCCACTAGAGGGACCAGGTTCATTGCCAGCCACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: STLYSRGSGICRRWI*VPTRGTRFIASHFS Trigger: TGAGAAGTGGCTGGCAATGAACCTGGTCCCTCTAGTGGGGACTCAGATCCACCTCCGACAGATCCCTGAACCTCTGCTGTACAAGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CCA 90 bp | TTGCACATCTGGGAGAGTGCCAACAGGTCTCCGCAGAAATGGTCTTaGGGAAAACGCCATCGGTTGGTTGCACCAACAATCCTGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHIWESANRSPQKWS*GKRHRLVAPTILRS Trigger: GGAGCGCAGGATTGTTGGTGCAACCAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGGAGACCTGTTGGCACTCTCCCAGATGTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCGAGGGACCAGGTTCATaGCCAGCCACTTCTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SYEVRPAREGDPIDSYESEGPGS*PATSHR Trigger: CCTGTGAGAAGTGGCTGGCAATGAACCTGGTCCCTC...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATTTCAGGTGGACCATGTaGCCCCCGCTCTCCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: YFSYEVRPAREGDPIDSYFRWTM*PPLSSA Trigger: CGCACTGGAGAGCGGGGGCAACATGGTCCACCTGAA...ATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAGGCTGGTAGGTGGCTAATATCAGAGCAAGGACAGGCCCTGTGTTGGACCCACCAGCGTCTGGGCTaGGATCTCATACTTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKAGRWLISEQGQALCWTHQRLG*DLILHQ Trigger: CTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTG...GGTCCAACACAGGGCCTGTCCTTGCTCTGATATTAGCCACCTACCAGCCTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS TCA 90 bp | CTAGAGGGACCAGGTTCATTGCCAGCCACTTCTCACAGGCCATGGTaGGCTGCTCTTCTTCGTACTTACAGCCGGCCAAGTAGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEGPGSLPATSHRPW*AALLRTYSRPSRSS Trigger: AGAACTTCTACTTGGCCGGCTGTAAGTACGAAGAAGAGCAGCTCACCATGGCCTGTGAGAAGTGGCTGGCAATGAACCTGGTCCCTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | ATTTGGTTGGTCCTGAACTCCTGCCACCTGCCGTCCACCAGCGTCTGGGCTTGGTCTACATTTAAAACATaGCACATCTGGGAGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IWLVLNSCHLPSTSVWAWSTFKT*HIWESA Trigger: GGCACTCTCCCAGATGTGCAATGTTTTAAATGTAGA...CCAAGCCCAGACGCTGGTGGACGGCAGGTGGCAGGAGTTCAGGACCAACCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207219.2 |
||
| CDS-3UTR CAA 90 bp | TCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGAAAGCCGGGATGCCCACGGTTaGGATTTTCAAGACGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SYEVRPAREGDPIDSYESRDAHG*DFQDVA Trigger: AGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCG...GCTTTCATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
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| CDS CCA 90 bp | TCTGGGAGCTTTTCATGTTCTGTATCAAGGCTGTCAGGTAGAGCTTaGCCAAGGTCCCAGACTGAAAGATCTGAGGGTGGTGGAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGSFSCSVSRLSGRA*PRSQTERSEGGGVP Trigger: GGGAACTCCACCACCCTCAGATCTTTCAGTCTGGGACCTTGGCCAAGCTCTACCTGACAGCCTTGATACAGAACATGAAAAGCTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGGCGACTTCAGCACCTaGTACAGCAGAGGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CHFYFSYEVRPAREGDPIGDFST*YSRGSG Trigger: CCCTGAACCTCTGCTGTACAAGGTGCTGAAGTCGCC...TATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAAGGACAGGCCCTGTGTTGGACCCTGGAAGGATGGAAGGAAACTTCAGGAGGTAGGGTCGTGTTaGATTCCCTTTATCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSKDRPCVGPWKDGRKLQEVGSC*IPFISK Trigger: CTTTGAGATAAAGGGAATCAAACACGACCCTACCTC...CTGAAGTTTCCTTCCATCCTTCCAGGGTCCAACACAGGGCCTGTCCTTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CAA 90 bp | TGTCATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATACACCAGCGTCTGGGCTaGGATCTCATACTTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CHFYFSYEVRPAREGDPIHQRLG*DLILHQ Trigger: CTGGTGAAGTATGAGATCCAAGCCCAGACGCTGGTG...TATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATCGGGATGCCCACGGTTaGGATTTTCAAGACGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HFYFSYEVRPAREGDPIDRDAHG*DFQDVA Trigger: AGCCACGTCTTGAAAATCCAAACCGTGGGCATCCCG...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCAAATGGAAGGAAGGATCAGAGAAAGCTGGGGCCACAAAGGGACACAGTCTCTACATTTAAAACATaGCACATCTGGGAGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VANGRKDQRKLGPQRDTVSTFKT*HIWESA Trigger: GGCACTCTCCCAGATGTGCAATGTTTTAAATGTAGA...GACTGTGTCCCTTTGTGGCCCCAGCTTTCTCTGATCCTTCCTTCCATTTGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CAA 90 bp | TTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTTTTGCATGATTTGGTaGGTCCTGAACTCCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FYFSYEVRPAREGDPIDSFCMIW*VLNSCH Trigger: GTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAA...GGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGTTGGACCCTGGAAGGATGGAAGGAAACTTCAGGGTAGCAAATGGAAGGAAACTTTTGCATGATTaGGTTGGTCCTGAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLDPGRMEGNFRVANGRKLLHD*VGPELL Trigger: CAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTT...CCTTCCATTTGCTACCCTGAAGTTTCCTTCCATCCTTCCAGGGTCCAACACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS GCA 90 bp | TGTCTGGGTTCTTCAGAGCTTCGTCAAGATCTACATTTAAAACATTaGACATCTGGGAGAGTGCCAACAGGTCTCCGCAGAAATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLGSSELRQDLHLKH*TSGRVPTGLRRNGL Trigger: AAGACCATTTCTGCGGAGACCTGTTGGCACTCTCCCAGATGTGCAATGTTTTAAATGTAGATCTTGACGAAGCTCTGAAGAACCCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTCTACATTTAAAACATaGCACATCTGGGAGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FYFSYEVRPAREGDPIDSSTFKT*HIWESA Trigger: GGCACTCTCCCAGATGTGCAATGTTTTAAATGTAGA...GGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGAGGTAGGGTCGTGTTaGATTCCCTTTATCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CHFYFSYEVRPAREGDPIEVGSC*IPFISK Trigger: CTTTGAGATAAAGGGAATCAAACACGACCCTACCTC...TATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TATGGAGACCCAGATATAATGATGAAGCGAGATCTAGTTGGTCAAGCACAGGAGTTTTGCATGATTTGGTaGGTCCTGAACTCCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YGDPDIMMKRDLVGQAQEFCMIW*VLNSCH Trigger: GTGGCAGGAGTTCAGGACCAACCAAATCATGCAAAA...CTCCTGTGCTTGACCAACTAGATCTCGCTTCATCATTATATCTGGGTCTCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS-3UTR CAA 90 bp | CATTTTTATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATAAACTTTTGCATGATTaGGTTGGTCCTGAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HFYFSYEVRPAREGDPIDKLLHD*VGPELL Trigger: CAGGAGTTCAGGACCAACCAAATCATGCAAAAGTTT...ATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | TATTTCTCTTATGAAGTCAGGCCGGCCAGGGAAGGGGATCCCATAGATTCCTATGATAAACCCAAACTTTaGCATGATTTGGTTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YFSYEVRPAREGDPIDSYDKPKL*HDLVGP Trigger: AGGACCAACCAAATCATGCAAAAGTTTGGGTTTATC...ATAGGAATCTATGGGATCCCCTTCCCTGGCCGGCCTGACTTCATAAGAGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGTTTTCCAATATCTATTGCACTGTGTCATATGTGTCTCCAACACTACCAGATAAACCCAAACTTTaGCATGATTTGGTTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AMFSNIYCTVSYVSPTLPDKPKL*HDLVGP Trigger: AGGACCAACCAAATCATGCAAAAGTTTGGGTTTATC...TGGTAGTGTTGGAGACACATATGACACAGTGCAATAGATATTGGAAAACATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048453.7 |
||
| CDS CCA 72 bp | CTCCGCAGAAATGGTCTTGGGGAAAACGCCATCGGTTaGTTGCACCAACAATCCTGCGCTCCAGCCGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRRNGLGENAIG*LHQQSCAPAES Trigger: GGACTCGGCTGGAGCGCAGGATTGTTGGTGCAACCAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CAA 72 bp | CGCAGAAATGGTCTTGGGGAAAACGCCATCGGTTGGTaGCACCAACAATCCTGCGCTCCAGCCGAGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRNGLGENAIGW*HQQSCAPAESC Trigger: GCAGGACTCGGCTGGAGCGCAGGATTGTTGGTGCAACCAACCGATGGCGTTTTCCCCAAGACCATTTCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS TCA 72 bp | TACAGCAGAGGTTCAGGGATCTGTCGGAGGTGGATCTaGGTCCCCACTAGAGGGACCAGGTTCATTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YSRGSGICRRWI*VPTRGTRFIAS Trigger: GCTGGCAATGAACCTGGTCCCTCTAGTGGGGACTCAGATCCACCTCCGACAGATCCCTGAACCTCTGCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS GCA 72 bp | GCAGAAATGGTCTTGGGGAAAACGCCATCGGTTGGTTaGACCAACAATCCTGCGCTCCAGCCGAGTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AEMVLGKTPSVG*TNNPALQPSPA Trigger: TGCAGGACTCGGCTGGAGCGCAGGATTGTTGGTGCAACCAACCGATGGCGTTTTCCCCAAGACCATTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CAA 72 bp | TCTCCGCAGAAATGGTCTTGGGGAAAACGCCATCGGTaGGTTGCACCAACAATCCTGCGCTCCAGCCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPQKWSWGKRHR*VAPTILRSSRV Trigger: GACTCGGCTGGAGCGCAGGATTGTTGGTGCAACCAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS TCA 72 bp | CCAGGTTCATTGCCAGCCACTTCTCACAGGCCATGGTaGGCTGCTCTTCTTCGTACTTACAGCCGGCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PGSLPATSHRPW*AALLRTYSRPS Trigger: ACTTGGCCGGCTGTAAGTACGAAGAAGAGCAGCTCACCATGGCCTGTGAGAAGTGGCTGGCAATGAACCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CAA 72 bp | TCACTGAAGGTGAACAACCTGGGCGACTTCAGCACCTaGTACAGCAGAGGTTCAGGGATCTGTCGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLKVNNLGDFST*YSRGSGICRRW Trigger: CCACCTCCGACAGATCCCTGAACCTCTGCTGTACAAGGTGCTGAAGTCGCCCAGGTTGTTCACCTTCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CAA 90 bp | ATTGCACATCTGGGAGAGTGCCAACAGGTCTCCGCAGAAATGGTCTaGGGGAAAACGCCATCGGTTGGTTGCACCAACAATCCTGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IAHLGECQQVSAEMV*GKTPSVGCTNNPAL Trigger: GAGCGCAGGATTGTTGGTGCAACCAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGGAGACCTGTTGGCACTCTCCCAGATGTGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CCA 72 bp | TGGGAGAGTGCCAACAGGTCTCCGCAGAAATGGTCTTaGGGAAAACGCCATCGGTTGGTTGCACCAACAATC | + |
|
Preference number: 6 (lower is better) Translates to: WESANRSPQKWS*GKRHRLVAPTI Trigger: GATTGTTGGTGCAACCAACCGATGGCGTTTTCCCCAAGACCATTTCTGCGGAGACCTGTTGGCACTCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS GCA 72 bp | GTTCTTCAGGGCCAGGGCGAAGGCAACTCTGGTGACTaGCGGGTCATTGATCCTCATGGAAATGATGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLQGQGEGNSGD*RVIDPHGNDDL Trigger: AAGATCATCATTTCCATGAGGATCAATGACCCGGCAGTCACCAGAGTTGCCTTCGCCCTGGCCCTGAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS GCA 72 bp | ACCCGGACCAGCCAGGACTCAGGGAAGAAATTAATGTaGTTCAACACCTCCAGATCCTTGCCACTGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: TRTSQDSGKKLM*FNTSRSLPLVM Trigger: CATCACCAGTGGCAAGGATCTGGAGGTGTTGAAGCACATTAATTTCTTCCCTGAGTCCTGGCTGGTCCGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048453.7 ENSMUST00000208593.2 |
||
| CDS CAA 72 bp | GCCAGGGCGAAGGCAACTCTGGTGACTGCCGGGTCATaGATCCTCATGGAAATGATGATCTTCTTTACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARAKATLVTAGS*ILMEMMIFFTG Trigger: CCCTGTAAAGAAGATCATCATTTCCATGAGGATCAATGACCCGGCAGTCACCAGAGTTGCCTTCGCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS GCA 72 bp | TTCCCACTTGAAGCCGAGGCATTCAAGGATCACGTCTaGTTCCCCGCTTTGGGTGCCACTGTTCATGATATT | + |
|
Preference number: 6 (lower is better) Translates to: FPLEAEAFKDHV*FPALGATVHDI Trigger: AATATCATGAACAGTGGCACCCAAAGCGGGGAAGCAGACGTGATCCTTGAATGCCTCGGCTTCAAGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CCA 72 bp | TTTTCATGTTCTGTATCAAGGCTGTCAGGTAGAGCTTaGCCAAGGTCCCAGACTGAAAGATCTGAGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FSCSVSRLSGRA*PRSQTERSEGG Trigger: ACCACCCTCAGATCTTTCAGTCTGGGACCTTGGCCAAGCTCTACCTGACAGCCTTGATACAGAACATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CAA 90 bp | CTGTCTGGGTTCTTCAGAGCTTCGTCAAGATCTACATTTAAAACATaGCACATCTGGGAGAGTGCCAACAGGTCTCCGCAGAAATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSGFFRASSRSTFKT*HIWESANRSPQKWS Trigger: AGACCATTTCTGCGGAGACCTGTTGGCACTCTCCCAGATGTGCAATGTTTTAAATGTAGATCTTGACGAAGCTCTGAAGAACCCAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CCA 72 bp | CTTACAGCCGGCCAAGTAGAAGTTCTTGATGGTGCTTaGTGCGAGTCTGTTCATCATCATGTTGACACACTT | + |
|
Preference number: 6 (lower is better) Translates to: LTAGQVEVLDGA*CESVHHHVDTL Trigger: AAGTGTGTCAACATGATGATGAACAGACTCGCACCAAGCACCATCAAGAACTTCTACTTGGCCGGCTGTAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
||
| CDS CAA 72 bp | TTCTTCAGAGCTTCGTCAAGATCTACATTTAAAACATaGCACATCTGGGAGAGTGCCAACAGGTCTCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FFRASSRSTFKT*HIWESANRSPQ Trigger: CTGCGGAGACCTGTTGGCACTCTCCCAGATGTGCAATGTTTTAAATGTAGATCTTGACGAAGCTCTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048453.7 ENSMUST00000207219.2 ENSMUST00000208593.2 |
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