Pregenerated sensors for BTBD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025103Ensembl transcript IDs: ENSMUST00000026093.9
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGTTCAGCGCAGCTGTTAGGGATCTTGGTATTCTACCCCCTTCTTaGTGTGAAGGGCATTGCAGTGCTGCAGTGGCCATCTGTTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: WFSAAVRDLGILPPS*CEGHCSAAVAICWH Trigger: ATGCCAACAGATGGCCACTGCAGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAACAGCTGCGCTGAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 90 bp | CCTTCTTGCTGTGAAGGGCATTGCAGTGCTGCAGTGGCCATCTGTTaGCATCTGTCACATCTCAGTCATCTGGATCACTGCAGCACCCAT | + |
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Preference number: 1 (lower is better) Translates to: PSCCEGHCSAAVAIC*HLSHLSHLDHCSTH Trigger: ATGGGTGCTGCAGTGATCCAGATGACTGAGATGTGACAGATGCCAACAGATGGCCACTGCAGCACTGCAATGCCCTTCACAGCAAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR GCA 90 bp | GTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTaGAGTGCTGCAGTGGCCATCTGTTGGCATCTGTCACATCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: VRDLGILPPSCCEGH*SAAVAICWHLSHLS Trigger: ACTGAGATGTGACAGATGCCAACAGATGGCCACTGCAGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 90 bp | GTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTGCAGTaGCCATCTGTTGGCATCTGTCACATCTCAGTCATCTGGATCACT | + |
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Preference number: 1 (lower is better) Translates to: VFYPLLAVKGIAVLQ*PSVGICHISVIWIT Trigger: AGTGATCCAGATGACTGAGATGTGACAGATGCCAACAGATGGCCACTGCAGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 90 bp | TCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTATaGTTCAGCGCAGCTGTTAGGGATCTTGGTATTCTACCCCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSSSAGVTGWTWTAL*FSAAVRDLGILPPS Trigger: AGAAGGGGGTAGAATACCAAGATCCCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 90 bp | GACACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATaGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGATCTTGGTATT | + |
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Preference number: 1 (lower is better) Translates to: DTKPSSSSAGVTGWT*TALWFSAAVRDLGI Trigger: AATACCAAGATCCCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 90 bp | GTAGATGACACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTaGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGATCTT | + |
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Preference number: 1 (lower is better) Translates to: VDDTKPSSSSAGVTG*TWTALWFSAAVRDL Trigger: AAGATCCCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTGTCATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 90 bp | AAGGCATGCGAATGCCCCAATGGTCAGAAAGCACTAACTTACCTCTaGCATGCAACACTGGTTAAGGAATGGTTACTACACAGTCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: KACECPNGQKALTYL*HATLVKEWLLHSLY Trigger: GTAAAGACTGTGTAGTAACCATTCCTTAACCAGTGTTGCATGCCAGAGGTAAGTTAGTGCTTTCTGACCATTGGGGCATTCGCATGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR TCA 90 bp | CCCACATCTGCTATTATGACAAGAATCTCTCAATTCCCAAACTACTaGAAGATCACGAGTCAGCGGATCTACGAAATCACACAAGACGAA | + |
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Preference number: 1 (lower is better) Translates to: PTSAIMTRISQFPNY*KITSQRIYEITQDE Trigger: TTCGTCTTGTGTGATTTCGTAGATCCGCTGACTCGTGATCTTTCAGTAGTTTGGGAATTGAGAGATTCTTGTCATAATAGCAGATGTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CAA 90 bp | GCTGGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGATCTaGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AGHGQLYGSAQLLGI*VFYPLLAVKGIAVL Trigger: CAGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGCACAAGGCATGCGAATGCCCCAATGGTCAGAAAGCACTAACTTACCTCACCCCCTTCTTGCTGTaGAGGGCATTGCAGTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VKHKACECPNGQKALTYLTPFLL*RALQCC Trigger: GCAGCACTGCAATGCCCTTCACAGCAAGAAGGGGGT...GAGGTAAGTTAGTGCTTTCTGACCATTGGGGCATTCGCATGCCTTGTGCTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR-3UTR GCA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTAAGGGCATTGCAGTGCTaGAGTGGCCATCTGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLRALQC*SGHLLA Trigger: TGCCAACAGATGGCCACTGCAGCACTGCAATGCCCT...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR-3UTR GCA 90 bp | GTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTTACCTTCCCTGTAAATaGACTGAAACTTTTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: VRDLGILPPSCCEGHCSAYLPCK*TETFLE Trigger: CTCAAGAAAAGTTTCAGTGCATTTACAGGGAAGGTA...AGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR-3UTR CCA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTATCTGGCATGCAACACTaGTTAAGGAATGGTTACTAC | + |
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Preference number: 2 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLSGMQH*LRNGYY Trigger: GTAGTAACCATTCCTTAACCAGTGTTGCATGCCAGA...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR-3UTR GCA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTAAACACATCACCTCCCTaGCATCTTGAAAATACAAAA | + |
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Preference number: 2 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLNTSPP*HLENTK Trigger: TTTTGTATTTTCAAGATGGCAGGGAGGTGATGTGTT...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR GCA 72 bp | GCAGCTGTTAGGGATCTTGGTATTCTACCCCCTTCTTaGTGTGAAGGGCATTGCAGTGCTGCAGTGGCCATC | + |
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Preference number: 3 (lower is better) Translates to: AAVRDLGILPPS*CEGHCSAAVAI Trigger: GATGGCCACTGCAGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAACAGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | TGTGAAGGGCATTGCAGTGCTGCAGTGGCCATCTGTTaGCATCTGTCACATCTCAGTCATCTGGATCACTGC | + |
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Preference number: 3 (lower is better) Translates to: CEGHCSAAVAIC*HLSHLSHLDHC Trigger: GCAGTGATCCAGATGACTGAGATGTGACAGATGCCAACAGATGGCCACTGCAGCACTGCAATGCCCTTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | CCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATaGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: PSSSSAGVTGWT*TALWFSAAVRD Trigger: ATCCCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR-3UTR CAA 90 bp | CACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTTGCAGTGGCCATCTGTaGGCATCTGTCACATCTCAG | + |
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Preference number: 3 (lower is better) Translates to: HKAFFLFSRSDWLDMDSFCSGHL*ASVTSQ Trigger: CTGAGATGTGACAGATGCCAACAGATGGCCACTGCA...AAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | ACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTaGACATGGACAGCTTTATGGTTCAGCGCAGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: TKPSSSSAGVTG*TWTALWFSAAV Trigger: AACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | TCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTATaGTTCAGCGCAGCTGTTAGGGATCTTGGTATTCTA | + |
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Preference number: 3 (lower is better) Translates to: SAGVTGWTWTAL*FSAAVRDLGIL Trigger: TAGAATACCAAGATCCCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | CATCTCAGTCATCTGGATCACTGCAGCACCCATGACTaGCTTAGTGGGATGGGAGTGATAAAGAATCCATCT | + |
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Preference number: 3 (lower is better) Translates to: HLSHLDHCSTHD*LSGMGVIKNPS Trigger: AGATGGATTCTTTATCACTCCCATCCCACTAAGCCAGTCATGGGTGCTGCAGTGATCCAGATGACTGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | TTGTTCAGTAAAGCACAAGGCATGCGAATGCCCCAATaGTCAGAAAGCACTAACTTACCTCTGGCATGCAAC | + |
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Preference number: 3 (lower is better) Translates to: LFSKAQGMRMPQ*SESTNLPLACN Trigger: GTTGCATGCCAGAGGTAAGTTAGTGCTTTCTGACCATTGGGGCATTCGCATGCCTTGTGCTTTACTGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR GCA 72 bp | AGTTACAGTTGTTCAGTAAAGCACAAGGCATGCGAATaGCCCAATGGTCAGAAAGCACTAACTTACCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SYSCSVKHKACE*PNGQKALTYLW Trigger: CCAGAGGTAAGTTAGTGCTTTCTGACCATTGGGGCATTCGCATGCCTTGTGCTTTACTGAACAACTGTAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | AAACAGTTCCCTTTCTTCAACAACTTCAAGAGATCCTaGCCACCAACACATCACCTCCCTGCCATCTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KQFPFFNNFKRS*PPTHHLPAILK Trigger: TTTCAAGATGGCAGGGAGGTGATGTGTTGGTGGCCAGGATCTCTTGAAGTTGTTGAAGAAAGGGAACTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CCA 72 bp | GAATGCCCCAATGGTCAGAAAGCACTAACTTACCTCTaGCATGCAACACTGGTTAAGGAATGGTTACTACAC | + |
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Preference number: 3 (lower is better) Translates to: ECPNGQKALTYL*HATLVKEWLLH Trigger: GTGTAGTAACCATTCCTTAACCAGTGTTGCATGCCAGAGGTAAGTTAGTGCTTTCTGACCATTGGGGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR TCA 72 bp | TGTAGCATTTTTACTTCTTGGGTGGAACTATGTAGATaGCACAAAGCCTTCTTCCTCTTCAGCAGGAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: CSIFTSWVELCR*HKAFFLFSRSD Trigger: GTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTGTCATCTACATAGTTCCACCCAAGAAGTAAAAATGCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR TCA 72 bp | GCTATTATGACAAGAATCTCTCAATTCCCAAACTACTaGAAGATCACGAGTCAGCGGATCTACGAAATCACA | + |
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Preference number: 3 (lower is better) Translates to: AIMTRISQFPNY*KITSQRIYEIT Trigger: TGTGATTTCGTAGATCCGCTGACTCGTGATCTTTCAGTAGTTTGGGAATTGAGAGATTCTTGTCATAATAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR-3UTR CAA 90 bp | GTGATAAAGAATCCATCTCAGATAATCCCTTCGATCTGTTTATATCACATTGTGCACATCCAGTTCTCTTaGCTTCGAATCATGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VIKNPSQIIPSICLYHIVHIQFS*LRIMQR Trigger: TCTCTGCATGATTCGAAGCAAAGAGAACTGGATGTG...CACAATGTGATATAAACAGATCGAAGGGATTATCTGAGATGGATTCTTTATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR TCA 72 bp | AAAAATGTAGAAATGTCACACTGCCAAATATCCCTTTaGTCCACTCTTACTGTAGCATTTTTACTTCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: KNVEMSHCQISL*STLTVAFLLLG Trigger: CCCAAGAAGTAAAAATGCTACAGTAAGAGTGGATCAAAGGGATATTTGGCAGTGTGACATTTCTACATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR CCA 90 bp | GCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGCCAGCACGAAGCGGTaGGCGGGGATGCGCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AGVTGWTWTALWFSAAVRASTKR*AGMRCG Trigger: CCCGCAGCGCATCCCCGCCCACCGCTTCGTGCTGGC...CCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | GCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGCGTCGAAGACCGCGCTaGCGGCCGCCAGCACGAAGC | + |
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Preference number: 4 (lower is better) Translates to: AGVTGWTWTALWFSAAVRRRRPR*RPPARS Trigger: GCTTCGTGCTGGCGGCCGGCAGCGCGGTCTTCGACG...CCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | GTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTTACAGCGGCTCGCGCTaGAGGGGCAGCAGCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: VRDLGILPPSCCEGHCSAYSGSR*RGSSGP Trigger: CGGGCCGCTGCTGCCCCTGCAGCGCGAGCCGCTGTA...AGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | GCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGACGCCTTGGTGGCCTaGCAGTTGTACAGCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: AGVTGWTWTALWFSAAVRDALVA*QLYSGS Trigger: CGAGCCGCTGTACAACTGGCAGGCCACCAAGGCGTC...CCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR TCA 90 bp | GCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTAGGCGAAGCGCTCCTTaGGCGACGCCTTGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AFFLFSRSDWLDMDSFMVRRSAP*ATPWWP Trigger: AGGCCACCAAGGCGTCGCTCAAGGAGCGCTTCGCCT...AACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR TCA 90 bp | GCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTGCCAGTTGTTGTCTCTaGCACTCTGCTTCTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: AFFLFSRSDWLDMDSFMVASCCL*HSASAQ Trigger: TTGGGCAGAAGCAGAGTGTCAGAGACAACAACTGGC...AACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | GTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTCCCCTCCGCACTGATTaGATCCACTGTGCTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: VRDLGILPPSCCEGHCSAPLRTD*IHCALV Trigger: GACAAGAGCACAGTGGATGCAATCAGTGCGGAGGGG...AGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR TCA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTATGGCCATGCCGCCGTTaGACATGGCGTCGAAGACCG | + |
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Preference number: 4 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLWPCRR*TWRRRP Trigger: CGGTCTTCGACGCCATGTTCAACGGCGGCATGGCCA...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | GCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGTTGTCTCTGACACTCTaGTTCTGCCCAACGTACAAT | + |
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Preference number: 4 (lower is better) Translates to: AGVTGWTWTALWFSAAVRLSLTL*FCPTYN Trigger: ATTGTACGTTGGGCAGAAGCAGAGTGTCAGAGACAA...CCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | CACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTGCAGCAGGGGTCTCATaGACTACTTTCTTCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HKAFFLFSRSDWLDMDSFAAGVS*TTFFSP Trigger: AGGACTGAAGAAAGTAGTGCATGAGACCCCTGCTGC...AAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | GCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGCATCTTCTATTGATGTaGCATTGTTATTGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGVTGWTWTALWFSAAVRHLLLM*HCYCQG Trigger: CCCCTGGCAATAACAATGGCACATCAATAGAAGATG...CCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| 3UTR CAA 72 bp | GGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGATCTaGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: GQLYGSAQLLGI*VFYPLLAVKGI Trigger: AATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAACAGCTGCGCTGAACCATAAAGCTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR GCA 90 bp | CACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTTTGAGCAGGACCTGCTaGAAACTCCTCAATTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: HKAFFLFSRSDWLDMDSFLSRTC*KLLNCH Trigger: ATGACAATTGAGGAGTTTGCAGCAGGTCCTGCTCAA...AAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR TCA 90 bp | GTAAAGCACAAGGCATGCGAATGCCCCAATGGTCAGAAAGCACTAACTTACCTCTACCACTTCACGGTCTaGCAAAATTCCAGATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: VKHKACECPNGQKALTYLYHFTV*QNSRLS Trigger: GCTCAATCTGGAATTTTGTCAGACCGTGAAGTGGTA...GAGGTAAGTTAGTGCTTTCTGACCATTGGGGCATTCGCATGCCTTGTGCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR CCA 90 bp | GTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTGGTCATAACGGTTTCTaGACCAATTTGAACTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: VRDLGILPPSCCEGHCSAGHNGF*TNLNFV Trigger: GACGAAGTTCAAATTGGTCCAGAAACCGTTATGACC...AGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR CCA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTAGCCATAGTGAGAATCTaGGCCCTTGAGTGTTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLAIVRI*ALECCA Trigger: TGCGCAACACTCAAGGGCCCAGATTCTCACTATGGC...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR TCA 90 bp | GCTGTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGGATTGACGGTAAAATaGAGAAAGAGGTTTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: AVRDLGILPPSCCEGHCSGLTVK*RKRFTT Trigger: AGTGGTAAACCTCTTTCTTCATTTTACCGTCAATCC...ACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTACAGTTGGAAAACAGTCTTGCTTaGAGCAGGGGTCTCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSGSVSCSFHDYIQLQLENSLA*SRGLMH Trigger: GTGCATGAGACCCCTGCTGCAAGCAAGACTGTTTTC...CAACTGTAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CCA 90 bp | AATCTCTCAATTCCCAAACTACTGAAAGATCACGAGTCAGCGGATCTACGAAATCGGCTCTCTACTTGCTaGAATCGGTTGATGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLSIPKLLKDHESADLRNRLSTC*NRLMQH Trigger: GTGCTGCATCAACCGATTCCAGCAAGTAGAGAGCCG...ATTTCGTAGATCCGCTGACTCGTGATCTTTCAGTAGTTTGGGAATTGAGAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTTCCATGACTACATTCAGTTACAGTTGTTCAGTAAAGCACAAGGCATGTCGAACAACCGCGCCTaGGTAAGCAACATAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFHDYIQLQLFSKAQGMSNNRA*VSNIKA Trigger: TGCCTTTATGTTGCTTACTCAGGCGCGGTTGTTCGA...CATGCCTTGTGCTTTACTGAACAACTGTAACTGAATGTAGTCATGGAAGGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTACAGTTGGACAAAATTCCAGATTaGGCAGGACCTGCTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSGSVSCSFHDYIQLQLDKIPD*AGPAAN Trigger: GTTTGCAGCAGGTCCTGCTCAATCTGGAATTTTGTC...CAACTGTAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTACAGTTGATAGGAAAACAGTCTTaGTTGCAGCAGGGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVSGSVSCSFHDYIQLQLIGKQS*LQQGSH Trigger: ATGAGACCCCTGCTGCAAGCAAGACTGTTTTCCTAT...CAACTGTAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| 3UTR CAA 72 bp | GTATCTTGTTCCTTCCATGACTACATTCAGTTACAGTaGTTCAGTAAAGCACAAGGCATGCGAATGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSCSFHDYIQLQ*FSKAQGMRMPQ Trigger: TTGGGGCATTCGCATGCCTTGTGCTTTACTGAACAACTGTAACTGAATGTAGTCATGGAAGGAACAAGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR TCA 90 bp | GTGATAAAGAATCCATCTCAGATAATCCCTTCGATCTGTTTATATCACATTGTGCTTGCTGGAATCGGTTaGTGCAGCACTCCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIKNPSQIIPSICLYHIVLAGIG*CSTPFL Trigger: GAGGAAAGGAGTGCTGCATCAACCGATTCCAGCAAG...CACAATGTGATATAAACAGATCGAAGGGATTATCTGAGATGGATTCTTTATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR GCA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTATTCCAAGGCAGGGACTaGATATTTCTTAGCAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLFQGRD*IFLSSI Trigger: TATACTGCTAAGAAATATGCAGTCCCTGCCTTGGAA...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTACAGTTGGTTTCTGGACCAATTTaGACTTCGTCTGAATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSGSVSCSFHDYIQLQLVSGPI*TSSEYK Trigger: TTTGTATTCAGACGAAGTTCAAATTGGTCCAGAAAC...CAACTGTAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR TCA 90 bp | AATCTCTCAATTCCCAAACTACTGAAAGATCACGAGTCAGCGGATCTACGAAATTTGTCCATCTTCTATTaGTGTGCCATTGTTATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLSIPKLLKDHESADLRNLSIFY*CAIVIA Trigger: GGCAATAACAATGGCACATCAATAGAAGATGGACAA...ATTTCGTAGATCCGCTGACTCGTGATCTTTCAGTAGTTTGGGAATTGAGAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTTCCATGACTACATTCAGTTACAGTTGTTCAGTAAAGCACAAGGCATGCATAAAGGCATTATCTaGCCTAAGATGTTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSFHDYIQLQLFSKAQGMHKGII*PKMFGE Trigger: CTCACCAAACATCTTAGGGCAGATAATGCCTTTATG...CATGCCTTGTGCTTTACTGAACAACTGTAACTGAATGTAGTCATGGAAGGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| 3UTR CAA 72 bp | GAAAAGACGGCAATTTACACACACATCCAGTTCTCTTaGCTTCGAATCATGCAGAGATTTAAATTAACTATT | + |
|
Preference number: 4 (lower is better) Translates to: EKTAIYTHIQFS*LRIMQRFKLTI Trigger: AATAGTTAATTTAAATCTCTGCATGATTCGAAGCAAAGAGAACTGGATGTGTGTGTAAATTGCCGTCTTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGAGTGACTGGCTGGACATGGACAGCTTTATGGTTCAGCGCAGCTGTTAGGGGAAAACAGTCTTGCTaGCAGCAGGGGTCTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGVTGWTWTALWFSAAVRGKQSC*QQGSHA Trigger: TGCATGAGACCCCTGCTGCAAGCAAGACTGTTTTCC...CCTAACAGCTGCGCTGAACCATAAAGCTGTCCATGTCCAGCCAGTCACTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTAAAGGCGAAGCGCTCCTaGAGCGACGCCTTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLKAKRS*SDALVA Trigger: GGCCACCAAGGCGTCGCTCAAGGAGCGCTTCGCCTT...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS CCA 90 bp | CTGGAATCGGTTGATGCAGCACTCCTTTCCTCTGAGGCAGCATCGTaGCCGATCAATGTACTCTACTCGGGGTTTAGGATTGACGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LESVDAALLSSEAAS*PINVLYSGFRIDGK Trigger: TTTACCGTCAATCCTAAACCCCGAGTAGAGTACATTGATCGGCCACGATGCTGCCTCAGAGGAAAGGAGTGCTGCATCAACCGATTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | CACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTTGTCACAGCCAGTTGTaGTCTCTGACACTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKAFFLFSRSDWLDMDSFCHSQL*SLTLCF Trigger: GAAGCAGAGTGTCAGAGACAACAACTGGCTGTGACA...AAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | CACAAAGCCTTCTTCCTCTTCAGCAGGAGTGACTGGCTGGACATGGACAGCTTTCTGCAAACTCCTCAATaGTCATCAGTGGGAAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HKAFFLFSRSDWLDMDSFLQTPQ*SSVGSG Trigger: TCCGCTTCCCACTGATGACAATTGAGGAGTTTGCAG...AAAGCTGTCCATGTCCAGCCAGTCACTCCTGCTGAAGAGGAAGAAGGCTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTACAGTTGTCCTTGAGCGACGCCTaGGTGGCCTGCCAGTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SVSGSVSCSFHDYIQLQLSLSDA*VACQLY Trigger: GTACAACTGGCAGGCCACCAAGGCGTCGCTCAAGGA...CAACTGTAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTGCATCCACTGTGCTCTaGTCTATGGTGTCCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: VRDLGILPPSCCEGHCSAASTVL*SMVSRQ Trigger: TTGTCTGGACACCATAGACAAGAGCACAGTGGATGC...AGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS GCA 90 bp | ACAGAGTGTATCTATGTCAATATCAGTAAACCCCTCCGCACTGATTaGATCCACTGTGCTCTTGTCTATGGTGTCCAGACAAAGACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TECIYVNISKPLRTD*IHCALVYGVQTKTS Trigger: GCTAGTCTTTGTCTGGACACCATAGACAAGAGCACAGTGGATGCAATCAGTGCGGAGGGGTTTACTGATATTGACATAGATACACTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS GCA 90 bp | GTTTCCAAATGTCACAGCCAGTTGTTGTCTCTGACACTCTGCTTCTaGCCAACGTACAATAGCTCCAAAAAGTCGACTTTCTCGGATACT | + |
|
Preference number: 5 (lower is better) Translates to: VSKCHSQLLSLTLCF*PTYNSSKKSTFSDT Trigger: AGTATCCGAGAAAGTCGACTTTTTGGAGCTATTGTACGTTGGGCAGAAGCAGAGTGTCAGAGACAACAACTGGCTGTGACATTTGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS GCA 90 bp | CTGTTTGTTTCCAAATGTCACAGCCAGTTGTTGTCTCTGACACTCTaGTTCTGCCCAACGTACAATAGCTCCAAAAAGTCGACTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LFVSKCHSQLLSLTL*FCPTYNSSKKSTFS Trigger: CGAGAAAGTCGACTTTTTGGAGCTATTGTACGTTGGGCAGAAGCAGAGTGTCAGAGACAACAACTGGCTGTGACATTTGGAAACAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGGGATCTTGGTATTCTACCCCCTTCTTGCTGTGAAGGGCATTGCAGTGCTATCTCTATAGGTTCTTaGAACATGACCCTGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRDLGILPPSCCEGHCSAISIGS*NMTLNV Trigger: CACATTCAGGGTCATGTTCAAAGAACCTATAGAGAT...AGCACTGCAATGCCCTTCACAGCAAGAAGGGGGTAGAATACCAAGATCCCTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS GCA 90 bp | CTCATCGAACAACCGCGCCTGAGTAAGCAACATAAAGGCATTATCTaGCCTAAGATGTTTGGTGAGAAATTCTACGCAATGTGCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LIEQPRLSKQHKGII*PKMFGEKFYAMCFQ Trigger: TTGGAAGCACATTGCGTAGAATTTCTCACCAAACATCTTAGGGCAGATAATGCCTTTATGTTGCTTACTCAGGCGCGGTTGTTCGATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR CAA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTAAAATGTCACAGCCAGTaGTTGTCTCTGACACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLKCHSQ*LSLTLC Trigger: GCAGAGTGTCAGAGACAACAACTGGCTGTGACATTT...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR CAA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTAGATCTGTATATTCACTaGATAATCCGTGGGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLDLYIH*IIRGPV Trigger: CACGGGCCCACGGATTATCAAGTGAATATACAGATC...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS TCA 90 bp | AGAACTTTCTGTTTGTTTCCAAATGTCACAGCCAGTTGTTGTCTCTaGCACTCTGCTTCTGCCCAACGTACAATAGCTCCAAAAAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RTFCLFPNVTASCCL*HSASAQRTIAPKSR Trigger: TCGACTTTTTGGAGCTATTGTACGTTGGGCAGAAGCAGAGTGTCAGAGACAACAACTGGCTGTGACATTTGGAAACAAACAGAAAGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS TCA 90 bp | AGGATTGACGGTAAAATGAAGAAAGAGGTTTACCACTTCACGGTCTaGCAAAATTCCAGATTGAGCAGGACCTGCTGCAAACTCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RIDGKMKKEVYHFTV*QNSRLSRTCCKLLN Trigger: ATTGAGGAGTTTGCAGCAGGTCCTGCTCAATCTGGAATTTTGTCAGACCGTGAAGTGGTAAACCTCTTTCTTCATTTTACCGTCAATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | AATCTCTCAATTCCCAAACTACTGAAAGATCACGAGTCAGCGGATCTACGAAATAATAGGAAAACAGTCTaGCTTGCAGCAGGGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLSIPKLLKDHESADLRNNRKTV*LAAGVS Trigger: TGAGACCCCTGCTGCAAGCAAGACTGTTTTCCTATT...ATTTCGTAGATCCGCTGACTCGTGATCTTTCAGTAGTTTGGGAATTGAGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS GCA 90 bp | GGCATTATCTGCCCTAAGATGTTTGGTGAGAAATTCTACGCAATGTaGTTCCAAGGCAGGGACTGCATATTTCTTAGCAGTATAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GIICPKMFGEKFYAM*FQGRDCIFLSSIKS Trigger: ACTCTTTATACTGCTAAGAAATATGCAGTCCCTGCCTTGGAAGCACATTGCGTAGAATTTCTCACCAAACATCTTAGGGCAGATAATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | CCAATGTCAGTGAGTGGTTCCGTATCTTGTTCCTTCCATGACTACATTCAGTTAGATGTGCCATTGTTATaGCCAGGGGAACTGAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PMSVSGSVSCSFHDYIQLDVPLL*PGELKN Trigger: ATTTTTCAGTTCCCCTGGCAATAACAATGGCACATC...TAACTGAATGTAGTCATGGAAGGAACAAGATACGGAACCACTCACTGACATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS-3UTR CAA 90 bp | AATCTCTCAATTCCCAAACTACTGAAAGATCACGAGTCAGCGGATCTACGAAATTCTGCCCTAAGATGTTaGGTGAGAAATTCTACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NLSIPKLLKDHESADLRNSALRC*VRNSTQ Trigger: TTGCGTAGAATTTCTCACCAAACATCTTAGGGCAGA...ATTTCGTAGATCCGCTGACTCGTGATCTTTCAGTAGTTTGGGAATTGAGAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTCCATGACTACATTCAGTTACAGTTGTTCAGTAAAGCACAAGGCATGCCTAGAACTTTCTGTTaGTTTCCAAATGTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSFHDYIQLQLFSKAQGMPRTFC*FPNVTA Trigger: GGCTGTGACATTTGGAAACAAACAGAAAGTTCTAGG...CATGCCTTGTGCTTTACTGAACAACTGTAACTGAATGTAGTCATGGAAGGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | GTGATAAAGAATCCATCTCAGATAATCCCTTCGATCTGTTTATATCACATTGTGACTTGCTGGAATCGGTaGATGCAGCACTCCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VIKNPSQIIPSICLYHIVTCWNR*MQHSFP Trigger: AGGAAAGGAGTGCTGCATCAACCGATTCCAGCAAGT...CACAATGTGATATAAACAGATCGAAGGGATTATCTGAGATGGATTCTTTATCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | AATCTCTCAATTCCCAAACTACTGAAAGATCACGAGTCAGCGGATCTACGAAATCTTTCTTCAGTCCTTTaGTGCCATAGTGAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLSIPKLLKDHESADLRNLSSVL*CHSENL Trigger: CAGATTCTCACTATGGCACAAAAGGACTGAAGAAAG...ATTTCGTAGATCCGCTGACTCGTGATCTTTCAGTAGTTTGGGAATTGAGAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS-3UTR CAA 90 bp | GTGATAAAGAATCCATCTCAGATAATCCCTTCGATCTGTTTATATCACATTGTGTCTATTGATGTGCCATaGTTATTGCCAGGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VIKNPSQIIPSICLYHIVSIDVP*LLPGEL Trigger: CAGTTCCCCTGGCAATAACAATGGCACATCAATAGA...CACAATGTGATATAAACAGATCGAAGGGATTATCTGAGATGGATTCTTTATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS GCA 72 bp | GCCTTGGTGGCCTGCCAGTTGTACAGCGGCTCGCGCTaGAGGGGCAGCAGCGGCCCGAGAGCGGACGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALVACQLYSGSR*RGSSGPRADGE Trigger: CTCGCCGTCCGCTCTCGGGCCGCTGCTGCCCCTGCAGCGCGAGCCGCTGTACAACTGGCAGGCCACCAAGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS TCA 72 bp | GCTCGATCTCGGCCGACGTCGTGGCCATGCCGCCGTTaGACATGGCGTCGAAGACCGCGCTGCCGGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARSRPTSWPCRR*TWRRRPRCRPP Trigger: TGGCGGCCGGCAGCGCGGTCTTCGACGCCATGTTCAACGGCGGCATGGCCACGACGTCGGCCGAGATCGAGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS CAA 72 bp | AAGCGCTCCTTGAGCGACGCCTTGGTGGCCTGCCAGTaGTACAGCGGCTCGCGCTGCAGGGGCAGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: KRSLSDALVACQ*YSGSRCRGSSG Trigger: GCCGCTGCTGCCCCTGCAGCGCGAGCCGCTGTACAACTGGCAGGCCACCAAGGCGTCGCTCAAGGAGCGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS CAA 90 bp | CCTGATGCGATCGCTTGTCCCACTGTAACCCCAGCGGCTCTCTACTaGCTGGAATCGGTTGATGCAGCACTCCTTTCCTCTGAGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PDAIACPTVTPAALY*LESVDAALLSSEAA Trigger: TGCTGCCTCAGAGGAAAGGAGTGCTGCATCAACCGATTCCAGCAAGTAGAGAGCCGCTGGGGTTACAGTGGGACAAGCGATCGCATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS CAA 72 bp | ATCGCTTGTCCCACTGTAACCCCAGCGGCTCTCTACTaGCTGGAATCGGTTGATGCAGCACTCCTTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IACPTVTPAALY*LESVDAALLSS Trigger: AGAGGAAAGGAGTGCTGCATCAACCGATTCCAGCAAGTAGAGAGCCGCTGGGGTTACAGTGGGACAAGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS CAA 72 bp | GTAAACCCCTCCGCACTGATTGCATCCACTGTGCTCTaGTCTATGGTGTCCAGACAAAGACTAGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VNPSALIASTVL*SMVSRQRLASW Trigger: CCAGCTGGCTAGTCTTTGTCTGGACACCATAGACAAGAGCACAGTGGATGCAATCAGTGCGGAGGGGTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS CAA 90 bp | TCAATATCAGTAAACCCCTCCGCACTGATTGCATCCACTGTGCTCTaGTCTATGGTGTCCAGACAAAGACTAGCCAGCTGGGGCTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: SISVNPSALIASTVL*SMVSRQRLASWGSS Trigger: CGATGAGCCCCAGCTGGCTAGTCTTTGTCTGGACACCATAGACAAGAGCACAGTGGATGCAATCAGTGCGGAGGGGTTTACTGATATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS TCA 72 bp | AGACTAGCCAGCTGGGGCTCATCGAACAACCGCGCCTaGGTAAGCAACATAAAGGCATTATCTGCCCTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLASWGSSNNRA*VSNIKALSALR Trigger: TCTTAGGGCAGATAATGCCTTTATGTTGCTTACTCAGGCGCGGTTGTTCGATGAGCCCCAGCTGGCTAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS TCA 72 bp | TCAGTCCTTTTGTGCCATAGTGAGAATCTGGGCCCTTaGGTGTTGCGCACGCTGTGTAACAGACATTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVLLCHSENLGP*VLRTLCNRHWA Trigger: TGCCCAATGTCTGTTACACAGCGTGCGCAACACTCAAGGGCCCAGATTCTCACTATGGCACAAAAGGACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
||
| CDS CCA 72 bp | GTTGATGCAGCACTCCTTTCCTCTGAGGCAGCATCGTaGCCGATCAATGTACTCTACTCGGGGTTTAGGATT | + |
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Preference number: 6 (lower is better) Translates to: VDAALLSSEAAS*PINVLYSGFRI Trigger: AATCCTAAACCCCGAGTAGAGTACATTGATCGGCCACGATGCTGCCTCAGAGGAAAGGAGTGCTGCATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS TCA 72 bp | GGTCATAACGGTTTCTGGACCAATTTGAACTTCGTCTaGATACAAAAATCTCAGCAGCGCCAGGAAGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GHNGFWTNLNFV*IQKSQQRQEGG Trigger: GCCGCCTTCCTGGCGCTGCTGAGATTTTTGTATTCAGACGAAGTTCAAATTGGTCCAGAAACCGTTATGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS GCA 72 bp | TGTCACAGCCAGTTGTTGTCTCTGACACTCTGCTTCTaGCCAACGTACAATAGCTCCAAAAAGTCGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: CHSQLLSLTLCF*PTYNSSKKSTF Trigger: GAAAGTCGACTTTTTGGAGCTATTGTACGTTGGGCAGAAGCAGAGTGTCAGAGACAACAACTGGCTGTGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS GCA 72 bp | TCCAAATGTCACAGCCAGTTGTTGTCTCTGACACTCTaGTTCTGCCCAACGTACAATAGCTCCAAAAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SKCHSQLLSLTL*FCPTYNSSKKS Trigger: CGACTTTTTGGAGCTATTGTACGTTGGGCAGAAGCAGAGTGTCAGAGACAACAACTGGCTGTGACATTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS CAA 72 bp | TTCCAGATTGAGCAGGACCTGCTGCAAACTCCTCAATaGTCATCAGTGGGAAGCGGATTAAGGAAAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FQIEQDLLQTPQ*SSVGSGLRKVL Trigger: AAGCACTTTCCTTAATCCGCTTCCCACTGATGACAATTGAGGAGTTTGCAGCAGGTCCTGCTCAATCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS TCA 72 bp | TGTTTGTTTCCAAATGTCACAGCCAGTTGTTGTCTCTaGCACTCTGCTTCTGCCCAACGTACAATAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CLFPNVTASCCL*HSASAQRTIAP Trigger: TGGAGCTATTGTACGTTGGGCAGAAGCAGAGTGTCAGAGACAACAACTGGCTGTGACATTTGGAAACAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS GCA 72 bp | ATCTATGTCAATATCAGTAAACCCCTCCGCACTGATTaGATCCACTGTGCTCTTGTCTATGGTGTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: IYVNISKPLRTD*IHCALVYGVQT Trigger: TGTCTGGACACCATAGACAAGAGCACAGTGGATGCAATCAGTGCGGAGGGGTTTACTGATATTGACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS GCA 72 bp | TGCCCTAAGATGTTTGGTGAGAAATTCTACGCAATGTaGTTCCAAGGCAGGGACTGCATATTTCTTAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CPKMFGEKFYAM*FQGRDCIFLSS Trigger: ACTGCTAAGAAATATGCAGTCCCTGCCTTGGAAGCACATTGCGTAGAATTTCTCACCAAACATCTTAGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS GCA 72 bp | CAACCGCGCCTGAGTAAGCAACATAAAGGCATTATCTaGCCTAAGATGTTTGGTGAGAAATTCTACGCAATG | + |
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Preference number: 6 (lower is better) Translates to: QPRLSKQHKGII*PKMFGEKFYAM Trigger: CATTGCGTAGAATTTCTCACCAAACATCTTAGGGCAGATAATGCCTTTATGTTGCTTACTCAGGCGCGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS TCA 72 bp | GGTAAAATGAAGAAAGAGGTTTACCACTTCACGGTCTaGCAAAATTCCAGATTGAGCAGGACCTGCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GKMKKEVYHFTV*QNSRLSRTCCK Trigger: TTTGCAGCAGGTCCTGCTCAATCTGGAATTTTGTCAGACCGTGAAGTGGTAAACCTCTTTCTTCATTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS TCA 72 bp | ATGTACTCTACTCGGGGTTTAGGATTGACGGTAAAATaGAGAAAGAGGTTTACCACTTCACGGTCTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: MYSTRGLGLTVK*RKRFTTSRSDK Trigger: TTTGTCAGACCGTGAAGTGGTAAACCTCTTTCTTCATTTTACCGTCAATCCTAAACCCCGAGTAGAGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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| CDS CAA 72 bp | GTAAGCAACATAAAGGCATTATCTGCCCTAAGATGTTaGGTGAGAAATTCTACGCAATGTGCTTCCAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VSNIKALSALRC*VRNSTQCASKA Trigger: TGCCTTGGAAGCACATTGCGTAGAATTTCTCACCAAACATCTTAGGGCAGATAATGCCTTTATGTTGCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026093.9 |
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