RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BTAF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040565

Ensembl transcript IDs: ENSMUST00000099494.4

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTaGGCACTGTCATATAGATACAAGTATCCTTGTGTGCTGTGTATA +
Preference number: 1 (lower is better)
Translates to: YMILVPKPDTFSSVG*ALSYRYKYPCVLCI
Trigger: TATACACAGCACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR GCA 90 bp TGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCATTaGTTAACATTTTCAGGTCCTAGGGTTAATATTAAAGTCACTCTG +
Preference number: 1 (lower is better)
Translates to: CIKYTKVATGPGSIH*LTFSGPRVNIKVTL
Trigger: CAGAGTGACTTTAATATTAACCCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR TCA 90 bp TTGAGAATAACTTGTTCCCCAATGAAGCAAGAGCCAGCACTAAGCTaGGTAGTTTCAGATCTATTTATACATTCAGTTAAAGTTCGCATA +
Preference number: 1 (lower is better)
Translates to: LRITCSPMKQEPALS*VVSDLFIHSVKVRI
Trigger: TATGCGAACTTTAACTGAATGTATAAATAGATCTGAAACTACTCAGCTTAGTGCTGGCTCTTGCTTCATTGGGGAACAAGTTATTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR GCA 90 bp AGTGAACAAAATGATGTTAAAGGATTTGAAAACACCATATGCATCTaGATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCAT +
Preference number: 1 (lower is better)
Translates to: SEQNDVKGFENTICI*IKYTKVATGPGSIH
Trigger: ATGAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGGTGTTTTCAAATCCTTTAACATCATTTTGTTCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR GCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGTGGCTGCTTCCTGTCTaGAGCTATTCAGCATGTAAA +
Preference number: 2 (lower is better)
Translates to: APPASGPATVNSLYHRVQWLLPV*SYSACK
Trigger: TTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCA...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR TCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAGTCACTCTGAAATTCTaGAAAGTATGGCTCATTAAG +
Preference number: 2 (lower is better)
Translates to: PCVLCIKSAPPASGPATVVTLKF*KVWLIK
Trigger: CTTAATGAGCCATACTTTTCAGAATTTCAGAGTGAC...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR TCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGGAGCCAGCACTAAGCTaGGTAGTTTCAGATCTATTT +
Preference number: 2 (lower is better)
Translates to: KVATGPGSIHCLTFSGPREPALS*VVSDLF
Trigger: AAATAGATCTGAAACTACTCAGCTTAGTGCTGGCTC...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR GCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGTCCCGCTTCAGGCCCTaGTACAGTAAACAGTCTTTA +
Preference number: 2 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVSRFRP*YSKQSL
Trigger: TAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGA...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR GCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGAACATGGAAACCTGGCTaGTTCCTGTCTGCAGCTATT +
Preference number: 2 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRTWKPG*FLSAAI
Trigger: AATAGCTGCAGACAGGAAGCAGCCAGGTTTCCATGT...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR GCA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGACCTGGTTCAATTCATTaGTTAACATTTTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRPGSIH*LTFSGP
Trigger: AGGACCTGAAAATGTTAAGCAATGAATTGAACCAGG...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR TCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGATAGACTTAGTCTGCTaGATATCAGCAGAAGGTAAC +
Preference number: 2 (lower is better)
Translates to: LVELHDFSAKARHIFQCRIDLVC*ISAEGN
Trigger: GTTACCTTCTGCTGATATTCAGCAGACTAAGTCTAT...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR CAA 90 bp CACATTAACATCGTATTTAATACAGTGCAAATACTTGAGAATAACTaGTTCCCCAATGAAGCAAGAGCCAGCACTAAGCTGAGTAGTTTC +
Preference number: 2 (lower is better)
Translates to: HINIVFNTVQILENN*FPNEARASTKLSSF
Trigger: GAAACTACTCAGCTTAGTGCTGGCTCTTGCTTCATTGGGGAACAAGTTATTCTCAAGTATTTGCACTGTATTAAATACGATGTTAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR GCA 72 bp GCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTaGTACAGTAAACAGTCTTTACCACAGGGTTCAGGG +
Preference number: 3 (lower is better)
Translates to: AVYKERSSRFRP*YSKQSLPQGSG
Trigger: CCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR CAA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTTCTGATGGTTTTAAGTaGATGTCTGGGTGTAGGACC +
Preference number: 3 (lower is better)
Translates to: LWNARFRITGWLSRLLKCSDGFK*MSGCRT
Trigger: GGTCCTACACCCAGACATCAACTTAAAACCATCAGA...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR CCA 72 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTaGGCACTGTCATATAGATACAAGTATCCTTGTGTG +
Preference number: 3 (lower is better)
Translates to: LVPKPDTFSSVG*ALSYRYKYPCV
Trigger: CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR CCA 72 bp ATTCTCTTGTGGAATGCTAGGTTCAGGATTACAGGATaGTTGTCAAGGCTACTCAAGTGTGACAAACGTCGT +
Preference number: 3 (lower is better)
Translates to: ILLWNARFRITG*LSRLLKCDKRR
Trigger: ACGACGTTTGTCACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAAGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR TCA 72 bp CAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTaGCAAACGTCGTATCTAAGTGCTGTGGAGTTTTTA +
Preference number: 3 (lower is better)
Translates to: QDYRMVVKATQV*QTSYLSAVEFL
Trigger: TAAAAACTCCACAGCACTTAGATACGACGTTTGTCACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR-3UTR CAA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGTTAAATATACAAAGGTaGCCACAGGGCCTGGTTCAA +
Preference number: 3 (lower is better)
Translates to: LVELHDFSAKARHIFQCRLNIQR*PQGLVQ
Trigger: TTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAA...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR GCA 72 bp TATACAAAGGTTGCCACAGGGCCTGGTTCAATTCATTaGTTAACATTTTCAGGTCCTAGGGTTAATATTAAA +
Preference number: 3 (lower is better)
Translates to: YTKVATGPGSIH*LTFSGPRVNIK
Trigger: TTTAATATTAACCCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTTTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR GCA 72 bp AATGATGTTAAAGGATTTGAAAACACCATATGCATCTaGATTAAATATACAAAGGTTGCCACAGGGCCTGGT +
Preference number: 3 (lower is better)
Translates to: NDVKGFENTICI*IKYTKVATGPG
Trigger: ACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGGTGTTTTCAAATCCTTTAACATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGTGACAGAGGGCAGGTaGGGCTTGAGCAGATCATGT +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQVTEGR*GLSRSC
Trigger: ACATGATCTGCTCAAGCCTCACCTGCCCTCTGTCAC...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCAAGGGTCTGGAATGCCTaGCTCAAGTGGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: AEYQQKVTELAAVAPGTARVWNA*LKWHQS
Trigger: AGACTGATGCCACTTGAGGCAGGCATTCCAGACCCT...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAACGGGAAACAATGGAATaGCGCTGTCCAGGAGGTATG +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAERETME*RCPGGM
Trigger: CATACCTCCTGGACAGCGGCATTCCATTGTTTCCCG...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAAGCCTCACTGCAGTGCTaGGGTACTGAAGGCACATAT +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAEASLQC*GTEGTY
Trigger: ATATGTGCCTTCAGTACCCCAGCACTGCAGTGAGGC...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTACTGCTATCTGAGCTTTaGTTGCTTTGGGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVLLSEL*LLWGWD
Trigger: GTCCCATCCCCAAAGCAATCAAAGCTCAGATAGCAG...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGCTCCTGGTTCGTCTCTaGAACTGTCATTTGGACCTG +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQLLVRL*NCHLDL
Trigger: CAGGTCCAAATGACAGTTGCAGAGACGAACCAGGAG...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGACAACGAGCCGCCATGTaGCTCACTGCAGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRQRAAM*LTAVLG
Trigger: CCCCAGCACTGCAGTGAGGCACATGGCGGCTCGTTG...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCAGCTGTCCAGGAGGTATaGTGCCATCTAGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: AEYQQKVTELAAVAPGTAAVQEV*CHLVSS
Trigger: ACTTGAGACTAGATGGCAGCATACCTCCTGGACAGC...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGCCGTCTCTTTTCTTCTaGCTCTCCATCAGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQPSLFF*LSISAV
Trigger: GACAGCACTGATGGAGAGCCAGAAGAAAAGAGACGG...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGAGTACTTGCCACTCCTaGTTCGTCTCTGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQSTCHS*FVSATV
Trigger: GACAGTTGCAGAGACGAACCAGGAGTGGCAAGTACT...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAACTGTGAGTGACTGTTaGATACTGCATTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVTVSDC*ILHCWT
Trigger: GGTCCAGCAATGCAGTATTCAACAGTCACTCACAGT...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGAGGTATGAGCCAAGATaGAGAGTTCTCGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQRYEPR*RVLVLC
Trigger: ACACAGGACGAGAACTCTTCATCTTGGCTCATACCT...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCAACCACTTCTCCAAGTTaGTGTGCAGCAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: AEYQQKVTELAAVAPGTATTSPS*CAAAFL
Trigger: AAGAAAGGCTGCTGCACAGCAACTTGGAGAAGTGGT...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTATATCTGAGCTTTGATTaGTTTGGGGATGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVYLSFD*FGDGTS
Trigger: CGAGGTCCCATCCCCAAAGCAATCAAAGCTCAGATA...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAATGCCAATTTCGATCTTaGATATTCCTGGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAECQFRS*IFLGPL
Trigger: CAGAGGGCCCAGGAATATGCAAGATCGAAATTGGCA...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAAGTCCAGGAGGTATGCTaGCATCTAGTCTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAEVQEVC*HLVSSK
Trigger: CTTACTTGAGACTAGATGGCAGCATACCTCCTGGAC...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGATAGGGTTCCAGTCATaGTCCACAAACACCACAGTG +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQIGFQS*STNTTV
Trigger: CACTGTGGTGTTTGTGGAGCATGACTGGAACCCTAT...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTACTGGCCACTTTGTGTTaGTACTGGACACGTAACACA +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVLATLC*YWTRNT
Trigger: TGTGTTACGTGTCCAGTACCAACACAAAGTGGCCAG...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTATTGCTTTCCCAGAAGTaGAGCTGTCAGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVLLSQK*SCQPFL
Trigger: CAGAAAAGGCTGACAGCTCCACTTCTGGGAAAGCAA...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCATTCTCCAAGTTGCTGTaGAGCAGCCTTTCTTGTAAC +
Preference number: 4 (lower is better)
Translates to: AEYQQKVTELAAVAPGTAFSKLL*SSLSCN
Trigger: GTTACAAGAAAGGCTGCTGCACAGCAACTTGGAGAA...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAACTCATTCGTTTCCACTaGATCCCTGGATCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAELIRFH*IPGSLF
Trigger: AAACAGAGATCCAGGGATGCAGTGGAAACGAATGAG...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAATTCTTGTTTGGTTCTTaGCACTGGATTCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAEFLFGS*HWIPLR
Trigger: CCTGAGTGGAATCCAGTGCCAAGAACCAAACAAGAA...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAAGCATCCCAAAGATGTaGCAACTTCACTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVSIPKM*QLHCHF
Trigger: GAAATGGCAGTGAAGTTGCCACATCTTTGGGATGCT...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGACATCCACTGTCTTATaGACTCCTGTTTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQTSTVL*TPVSFM
Trigger: CATGAACGAAACAGGAGTTCATAAGACAGTGGATGT...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGCTTGTTGTACACTGCTaGAGAAGCTTAGCTATGTAC +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQLVVHC*RSLAMY
Trigger: GTACATAGCTAAGCTTCTTCAGCAGTGTACAACAAG...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAGAATTCACCAATTCTTaGGCAGGAACATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVEFTNS*AGTSPL
Trigger: AAGAGGTGATGTTCCTGCTCAAGAATTGGTGAATTC...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAATTGCACCTTCTTGCTTaGCATTGTCATCAATTGCTC +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAELHLLA*HCHQLL
Trigger: GAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAA...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGACTTCATCTACCCAATaGCCTGTTAATGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQTSSTQ*PVNVGG
Trigger: TCCACCAACATTAACAGGTCATTGGGTAGATGAAGT...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAATCATCTCCTCTAAAGTaGTGTCTCCCATTTTACCAC +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAESSPLK*CLPFYH
Trigger: GTGGTAAAATGGGAGACAGCACTTTAGAGGAGATGA...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTATTCTCCGGAAGCTGCTaGAAGCTCACAACAGCACAC +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVFSGSC*KLTTAH
Trigger: GTGTGCTGTTGTGAGCTTGCAGCAGCTTCCGGAGAA...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAATCCATCCAAACCTTGTaGATAAGATCCAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAESIQTL*IRSRIS
Trigger: GGAAATTCTGGATCTTATTCACAAGGTTTGGATGGA...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGCTAGTCTCAAGTAAGTaGCAGAGGGCAGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRLVSSK*QRAGEA
Trigger: AGCCTCACCTGCCCTCTGTCACTTACTTGAGACTAG...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGTTGCGATGTTCATCTTaGATTTCTGCAAGCCCATTA +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQLRCSS*ISASPL
Trigger: TAATGGGCTTGCAGAAATTCAAGATGAACATCGCAA...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAACCTGTTTCGTTCATGTaGTTTAAAACCACACCTAAC +
Preference number: 4 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAEPVSFM*FKTTPN
Trigger: GTTAGGTGTGGTTTTAAAGCACATGAACGAAACAGG...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTAAGTTTCTCCGGAAGCTaGTGCAAGCTCACAACAGCA +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVSFSGS*CKLTTA
Trigger: TGCTGTTGTGAGCTTGCAGCAGCTTCCGGAGAAACT...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCCGCCATGTGCCTCACTaGAGTGCTGGGGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFRHVPH*SAGVLK
Trigger: CTTCAGTACCCCAGCACTGCAGTGAGGCACATGGCG...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTAACAGGGAGTGAGGTATaGGTCCACACAAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVTGSEV*VHTKRA
Trigger: AGCTCTCTTTGTGTGGACCCATACCTCACTCCCTGT...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGCATGTTTGGAGGGTCTaGAATGCCTGCCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRHVWRV*NACLKW
Trigger: CCACTTGAGGCAGGCATTCCAGACCCTCCAAACATG...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAGAGTTCAGCATTGATTaGCACTGGGATCTTGTAATT +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVEFSID*HWDLVI
Trigger: AATTACAAGATCCCAGTGCCAATCAATGCTGAACTC...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAGAAGCTTATACTTATTaGGAAAGGCTAACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVEAYTY*ERLTSS
Trigger: TGAACTGGTTAGCCTTTCTCAATAAGTATAAGCTTC...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATTCAACAGCTTGTCCTaGTGCAATCCGGGTATCCCA +
Preference number: 4 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRFNSLS*CNPGIP
Trigger: TGGGATACCCGGATTGCAGCAGGACAAGCTGTTGAA...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGAGTACTCATTCCAATTaGTTCTCCCATATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQSTHSN*FSHIKS
Trigger: GGACTTAATATGGGAGAAGCAATTGGAATGAGTACT...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTCTCAGCTGCAGTACTTaGCACTCCTGGTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCLSCST*HSWFVS
Trigger: AGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAG...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAAAGTGGCATACATTCTaGCAATTTCGATCTTGCATA +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVKWHTF*QFRSCI
Trigger: TATGCAAGATCGAAATTGGCAGAATGTATGCCACTT...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGCATTGCCAGGACACCTaGTTCTTGTTCTCGACTGGA +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRHCQDT*FLFSTG
Trigger: TCCAGTCGAGAACAAGAAGCAGGTGTCCTGGCAATG...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTGCCCGGTCCATGGCCTaGAGATCTCGCATAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFARSMA*RSRIGF
Trigger: GAACCCTATGCGAGATCTGCAGGCCATGGACCGGGC...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTATGTAATAATTTCCGTTaGCGTGCTATCCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PCVLCIKSAPPASGPATVCNNFR*RAILSL
Trigger: TAAAGAGAGGATAGCACGCCAACGGAAATTATTACA...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTATCCTGCTCGGAATTCTaGATCAATCAATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVSCSEF*INQFSC
Trigger: GCAGCTGAATTGATTGATTCAGAATTCCGAGCAGGA...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGAACCACACCTAACGTTTaGGCACAAGTCTCACGAACT +
Preference number: 4 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRTTPNV*AQVSRT
Trigger: AGTTCGTGAGACTTGTGCTCAAACGTTAGGTGTGGT...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTAGTGGGACTAAAACTGTaGGTGACTGTTGAATACTGC +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVVGLKL*VTVEYC
Trigger: GCAGTATTCAACAGTCACTCACAGTTTTAGTCCCAC...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGCAGTTGTTTCAAGGCTaGGAGCTTAGGCGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: LVELHDFSAKARHIFQCRQLFQG*ELRRVL
Trigger: CAACACGCGCCTAAGCTCTCAGCCTTGAAACAACTG...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTATTCCATGATGGTGTCTaGACCAGCAATATACTCCTG +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVFHDGV*TSNILL
Trigger: CAGGAGTATATTGCTGGTGCAGACACCATCATGGAA...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTGTAATGATCCCCCTGTaGTTGGTGACAGTATGGTGC +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCVMIPL*LVTVWC
Trigger: GCACCATACTGTCACCAAGCACAGGGGGATCATTAC...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGATGTGCCTCACTGCAGTaGTGGGGTACTGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRCASLQ*WGTEGT
Trigger: TGTGCCTTCAGTACCCCAGCACTGCAGTGAGGCACA...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGTTGGAGGGTCTGGAATaGCTGCCTCAAGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LVELHDFSAKARHIFQCRLEGLE*LPQVAS
Trigger: TGATGCCACTTGAGGCAGGCATTCCAGACCCTCCAA...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGTTAGGTGGAAGATCCTaGAAAACATCTTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: APPASGPATVNSLYHRVQLGGRS*KTSSFI
Trigger: AATGAAAGAAGATGTTTTGCAGGATCTTCCACCTAA...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTACCACCACTTTTCCCATaGGCTTTAAGAATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVPPLFP*ALRISL
Trigger: CAGAGAAATTCTTAAAGCTCATGGGAAAAGTGGTGG...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATTCACACCATCCTGCTaGTATTTCCTGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRFTPSC*YFLSSA
Trigger: TGCTGAACTCAGGAAATATCAGCAGGATGGTGTGAA...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTTTGAATTCTGGATGCTaGGGGGTTAAGACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCLNSGC*GVKTSA
Trigger: AGCACTGGTCTTAACCCCTCAGCATCCAGAATTCAA...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGACCCAGGCCACCAACGTaGGTTGTGAGTAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRPRPPT*VVSRRT
Trigger: TGTTCTTCTACTCACAACTCACGTTGGTGGCCTGGG...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTAACAGCTTGTCCTGCTaGAATCCGGGTATCCCAATT +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCNSLSC*NPGIPI
Trigger: AATTGGGATACCCGGATTGCAGCAGGACAAGCTGTT...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGAGGAACCAGGGATGCTaGAGCAACAGCTCTAACATC +
Preference number: 4 (lower is better)
Translates to: LVELHDFSAKARHIFQCRRNQGC*SNSSNI
Trigger: GATGTTAGAGCTGTTGCTGCAGCATCCCTGGTTCCT...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTGTGACTGTTGAATACTaGATTGCTGGACCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCVTVEY*IAGPEG
Trigger: ACCCTCAGGTCCAGCAATGCAGTATTCAACAGTCAC...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGAGTCCATGGAAGCTGCTaGTATTTCAAACACTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRVHGSC*YFKHLQ
Trigger: CTGCAAGTGTTTGAAATAGCAGCAGCTTCCATGGAC...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTTTTGGTTCTTGGCACTaGATTCCACTCAGGCACGTT +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCFGSWH*IPLRHV
Trigger: AACGTGCCTGAGTGGAATCCAGTGCCAAGAACCAAA...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGACCAAGCACTCATCCATaGGCATGCAGCTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRPSTHP*ACSCYQ
Trigger: TTGGTAGCAGCTGCATGCCCATGGATGAGTGCTTGG...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTATCGATCTGTAGTAGATaGATCTTCCATAGAACTCTC +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVSICSR*IFHRTL
Trigger: GAGAGTTCTATGGAAGATTCATCTACTACAGATCGA...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTGTTTACAAGGGCTGCTaGAGTTGGGGTATAATCCAA +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCVYKGC*SWGIIQ
Trigger: TTGGATTATACCCCAACTTCAGCAGCCCTTGTAAAC...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGTCTTTATTCTGGATTTaGCCTTGCCGTACCTTACCA +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRSLFWI*PCRTLP
Trigger: TGGTAAGGTACGGCAAGGTCAAATCCAGAATAAAGA...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTTCCCCCTGTGCTTGGTaGCAGTATGGTGCATTCCAT +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFSPCAW*QYGAFH
Trigger: ATGGAATGCACCATACTGTCACCAAGCACAGGGGGA...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCGGTAGATCTGCTATCTaGGCTTTGATTGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFGRSAI*ALIALG
Trigger: CCCCAAAGCAATCAAAGCTCAGATAGCAGATCTACC...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGCTCACACTGTCTGTCTaGTCACTCATCCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVLTLSV*SLILPN
Trigger: ATTGGGAAGGATGAGTGATCAGACAGACAGTGTGAG...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGCACCAACGTGAGTTGTaGGTAGAAGAACATCGATGG +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVHQREL*VEEHRW
Trigger: CCATCGATGTTCTTCTACTCACAACTCACGTTGGTG...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCTCAAGTAAACGCGGTTaGACAGCTAGGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFSSKRG*TARVTA
Trigger: AGCTGTTACCCTAGCTGTGCAACCGCGTTTACTTGA...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGTTGGTGACAGTATGGTaGATTCCATCCTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRLVTVW*IPSFSE
Trigger: CTCAGAAAAGGATGGAATGCACCATACTGTCACCAA...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGGGCAAGTGCTTCAATTaGACCTTCTTGCTTGACATT +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRGKCFN*TFLLDI
Trigger: AATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCC...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTATTTCCACTGCATCCCTaGATCTCTGTTTTGCAAATA +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVFPLHP*ISVLQI
Trigger: TATTTGCAAAACAGAGATCCAGGGATGCAGTGGAAA...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCAAAATCTCTGGTCGCTaGGTCTTCCATGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFKISGR*VFHDGV
Trigger: GACACCATCATGGAAGACCCAGCGACCAGAGATTTT...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
3UTR CAA 72 bp TCTATATACAGCTGCCCACCCTCACCATTGAGCTGTTaGAACACTAGCTCATTAGCTCTCTGCTCAGTTATT +
Preference number: 4 (lower is better)
Translates to: SIYSCPPSPLSC*NTSSLALCSVI
Trigger: AATAACTGAGCAGAGAGCTAATGAGCTAGTGTTCAAACAGCTCAATGGTGAGGGTGGGCAGCTGTATATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGAAATCAATAGGTAAGTaGGAAGGCTGCATCATTAGG +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRKSIGK*EGCIIR
Trigger: CCTAATGATGCAGCCTTCTCACTTACCTATTGATTT...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGAGTGTTGCAAAGCACTaGGTAGCCATGAATCTCACA +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVSVAKH*VAMNLT
Trigger: TGTGAGATTCATGGCTACTCAGTGCTTTGCAACACT...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGAGAACCTGGAGAGGGCTaGGAGTACAGTAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTREPGEG*EYSNSL
Trigger: AAGACTATTACTGTACTCTCAGCCCTCTCCAGGTTC...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCCAGGTTCTCAAGAACTaGTTTCATGCTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFQVLKN*FHACFP
Trigger: GGGAAAGCAAGCATGAAATCAGTTCTTGAGAACCTG...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTACCAGAATTTCCTGGCTaGTTTCTAAAACACAAAACT +
Preference number: 4 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVPEFPG*FLKHKT
Trigger: AGTTTTGTGTTTTAGAAAGCAGCCAGGAAATTCTGG...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGGCTGGTGATAGCAAATaGTGCTTTCTGATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVAGDSK*CFLMPV
Trigger: TACAGGCATCAGAAAGCAGCATTTGCTATCACCAGC...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTCATAACACAGGCAAGTaGTTCAATTGCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LWNARFRITGWLSRLLKCHNTGK*FNCTFL
Trigger: CAAGAAGGTGCAATTGAAGCACTTGCCTGTGTTATG...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGGATCTCCTGCTAGAATaGAGATGGACTGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRDLLLE*RWTVMF
Trigger: AAACATTACAGTCCATCTGCATTCTAGCAGGAGATC...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGACTTTGTGTTGGTACTaGACACGTAACACAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVTLCWY*TRNTGS
Trigger: ACTCCCTGTGTTACGTGTCCAGTACCAACACAAAGT...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGACTGTCATTTGGACCTaGTGCCGTTTACTATCTAAC +
Preference number: 4 (lower is better)
Translates to: LVELHDFSAKARHIFQCRTVIWT*CRLLSN
Trigger: GTTAGATAGTAAACGGCATCAGGTCCAAATGACAGT...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGTTGTGCCTTTTTACTTaGTGTTGCAACCTTATCCTT +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRLCLFT*CCNLIL
Trigger: AAGGATAAGGTTGCAACATCAAGTAAAAAGGCACAA...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGATTGGACTTCAAATTCTaGACCAGCAGACCCCAAAAG +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRLDFKF*TSRPQK
Trigger: CTTTTGGGGTCTGCTGGTGCAGAATTTGAAGTCCAA...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGCATCAGTGCTGTCATTaGTCTTCTCATTCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVHQCCH*SSHSFP
Trigger: TGGAAACGAATGAGAAGAGCAATGACAGCACTGATG...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTACTCATCCATGGGCATaGAGCTGCTACCAAATACTG +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFTHPWA*SCYQIL
Trigger: CAGTATTTGGTAGCAGCTGCATGCCCATGGATGAGT...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGAGGTGATAGCAAATGCTaGTTTCTGATGCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRGDSKC*FLMPVE
Trigger: CTCTACAGGCATCAGAAAGCAGCATTTGCTATCACC...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGATGTGGCAACTTCACTaGCATTTCAGCACCAAAATG +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVMWQLH*HFSTKM
Trigger: CATTTTGGTGCTGAAATGGCAGTGAAGTTGCCACAT...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGAGCTATTTCAAACACTTaGAGGGAATTCACCAATTCT +
Preference number: 4 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRAISNT*REFTNS
Trigger: AGAATTGGTGAATTCCCTGCAAGTGTTTGAAATAGC...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCAAGATCAGTATTCTGTaGTGTGCCACAACAGACTCT +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFKISIL*CATTDS
Trigger: AGAGTCTGTTGTGGCACAGCACAGAATACTGATCTT...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCCAAGAACTGATTTCATaGTTGCTTTCCCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFQELIS*LLSQKW
Trigger: CCACTTCTGGGAAAGCAAGCATGAAATCAGTTCTTG...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGAGCCTTTCTTGTAACTaGAGTAGTACCAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVSLSCN*SSTSIQ
Trigger: CTGGATACTGGTACTACTCCAGTTACAAGAAAGGCT...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCAATCATAGACTTCAATaGGCCAACCATAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFNHRLQ*ANHSIP
Trigger: TGGGATGCTATGGTTGGCCCATTGAAGTCTATGATT...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGTATCGAGCAGCAAACTaGCGTTCAGTACCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LVELHDFSAKARHIFQCRYRAAN*RSVPKN
Trigger: ATTTTTGGGTACTGAACGCCAGTTTGCTGCTCGATA...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTCTTCTTTCATTCTTCTaGGAAGGAACGGCAGGACTT +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFLLSFF*EGTAGL
Trigger: AAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAG...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGAGCATGCTTTTAAGCTaGCAGAAGATCAGTATTCTG +
Preference number: 4 (lower is better)
Translates to: LVELHDFSAKARHIFQCRSMLLS*QKISIL
Trigger: CAGAATACTGATCTTCTGTCAGCTTAAAAGCATGCT...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGAGACATTGTCATCAATTaGTCCCAACCAAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRDIVIN*SQPRKY
Trigger: GTACTTCCTTGGTTGGGAGCAATTGATGACAATGTC...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTGAAGTGCAGAGTCCATaGAAGCTGCTGCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFEVQSP*KLLLFQ
Trigger: TTGAAATAGCAGCAGCTTCCATGGACTCTGCACTTC...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGAAGCTAGAGTTTTCTTaGCTAATAACAGTATTTGCG +
Preference number: 4 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRKLEFS*LITVFA
Trigger: CGCAAATACTGTTATTAGCCAAGAAAACTCTAGCTT...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTAGGATCCACTTCACCTaGTTTTTCATCTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFRIHFT*FFILDF
Trigger: GAAGTCCAAGATGAAAAATCAGGTGAAGTGGATCCT...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGACCAAATCTTCATCGTTaGAGAGTTCTTCAGTACTCA +
Preference number: 4 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRPNLHR*RVLQYS
Trigger: TGAGTACTGAAGAACTCTTCAACGATGAAGATTTGG...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTTGCTGCTCTTCGAACTaGAGATATAGTGTGATGCAA +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFCCSSN*RYSVMQ
Trigger: TTGCATCACACTATATCTTCAGTTCGAAGAGCAGCA...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGACCAGGTCGTTTGCTTaGTCTATTGTTAAAACATTG +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVTRSFA*SIVKTL
Trigger: CAATGTTTTAACAATAGATCAAGCAAACGACCTGGT...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTTCTTAATAACTTTTaGATTAGGGCATGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LVELHDFSAKARHIFQCRVLNNF*IRAWCP
Trigger: AGGACACCATGCCCTAATTCAAAAGTTATTAAGAAC...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTCCTCACAACATCATATaGGGCTACTATCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFPHNII*GYYQIV
Trigger: CACAATCTGATAGTAGCCTCATATGATGTTGTGAGG...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGTACATCCTGACGAACTaGCAAAGCATATTTTATTCC +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVYILTN*QSIFYS
Trigger: GGAATAAAATATGCTTTGGCAGTTCGTCAGGATGTA...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGTGTTTACATTCATTCTaGATACGTGTGAACGGAACA +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVCLHSF*IRVNGT
Trigger: TGTTCCGTTCACACGTATGCAGAATGAATGTAAACA...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR GCA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCTTCCCATCTAACAATTaGTCTAAAAAGTGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PYASALNIQRLPQGLVQFFPSNN*SKKCRS
Trigger: AGAGCGACACTTTTTAGAGCAATTGTTAGATGGGAA...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGCCTGATTTTTCATCTTaGACTTCAAATTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVPDFSS*TSNSAP
Trigger: TGGTGCAGAATTTGAAGTCCAAGATGAAAAATCAGG...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR TCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTACTGAAGATATAGTGTaGTGCAAAAATGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFTEDIV*CKNGQT
Trigger: TGTCTGGCCATTTTTGCATCACACTATATCTTCAGT...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CCA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTTCCAAAACATTGTTCTaGATTGGTGTTCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFSKTLF*IGVPER
Trigger: TCTTTCTGGAACACCAATCCAGAACAATGTTTTGGA...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAAGGTGCAGAGCGTCCATaGCCAGGACACCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAEGAERP*PGHLLL
Trigger: AAGAAGCAGGTGTCCTGGCAATGGACGCTCTGCACC...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAACAGGACACCTGCTTCTaGTTCTCGACTGGAGCTTCG +
Preference number: 5 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAEQDTCF*FSTGAS
Trigger: CGAAGCTCCAGTCGAGAACAAGAAGCAGGTGTCCTG...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTACACCACTTCTCCAAGTaGCTGTGCAGCAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PCVLCIKSAPPASGPATVHHFSK*LCSSLS
Trigger: AGAAAGGCTGCTGCACAGCAACTTGGAGAAGTGGTG...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp ACCACAGTGTCAGCTCCAGTCAAGTTCAGGCCCAGGCCACCAACGTaGGTTGTGAGTAGAAGAACATCGATGGAGGGGTCGTTGTTAAAC +
Preference number: 5 (lower is better)
Translates to: TTVSAPVKFRPRPPT*VVSRRTSMEGSLLN
Trigger: GTTTAACAACGACCCCTCCATCGATGTTCTTCTACTCACAACTCACGTTGGTGGCCTGGGCCTGAACTTGACTGGAGCTGACACTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp TGCAAGCTCACAACAGCACACGCAGCAAACGTGTGTACTCTCAGCTaGAGTACTTGCCACTCCTGGTTCGTCTCTGCAACTGTCATTTGG +
Preference number: 5 (lower is better)
Translates to: CKLTTAHAANVCTLS*STCHSWFVSATVIW
Trigger: CCAAATGACAGTTGCAGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGAGTACACACGTTTGCTGCGTGTGCTGTTGTGAGCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp GATTGCTTTGGGGATGGGACCTCGCCTGCTGGTGATAGCAAATGCTaGTTTCTGATGCCTGTAGAGTGTAATGATCCCCCTGTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: DCFGDGTSPAGDSKC*FLMPVECNDPPVLG
Trigger: ACCAAGCACAGGGGGATCATTACACTCTACAGGCATCAGAAAGCAGCATTTGCTATCACCAGCAGGCGAGGTCCCATCCCCAAAGCAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp ACATCTTCTTTCATTCTTCTGAGAAGGAACGGCAGGACTTGGCGGTaGAGAGCGTCCATTGCCAGGACACCTGCTTCTTGTTCTCGACTG +
Preference number: 5 (lower is better)
Translates to: TSSFILLRRNGRTWR*RASIARTPASCSRL
Trigger: CAGTCGAGAACAAGAAGCAGGTGTCCTGGCAATGGACGCTCTGCACCGCCAAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp TCGAGAGAGCGCATGAAGGTCTCCAGGTTGTACTCCGAATCATACTaGTCGGCGTCCCAGAGGTCACTCAGGTTCTCAAGAACTGATTTC +
Preference number: 5 (lower is better)
Translates to: SRERMKVSRLYSESY*SASQRSLRFSRTDF
Trigger: GAAATCAGTTCTTGAGAACCTGAGTGACCTCTGGGACGCCGAGCAGTATGATTCGGAGTACAACCTGGAGACCTTCATGCGCTCTCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCAGTTCTTGTTTGGTTCTaGGCACTGGATTCCACTCAG +
Preference number: 5 (lower is better)
Translates to: AEYQQKVTELAAVAPGTAVLVWF*ALDSTQ
Trigger: CTGAGTGGAATCCAGTGCCAAGAACCAAACAAGAAC...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTAATTTTCCTGGCCACTTaGTGTTGGTACTGGACACGT +
Preference number: 5 (lower is better)
Translates to: PCVLCIKSAPPASGPATVIFLAT*CWYWTR
Trigger: ACGTGTCCAGTACCAACACAAAGTGGCCAGGAAAAT...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTATTCCTGAGTTCAGCATaGATTGGCACTGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: PCVLCIKSAPPASGPATVFLSSA*IGTGIL
Trigger: CAAGATCCCAGTGCCAATCAATGCTGAACTCAGGAA...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CCTTGTGTGCTGTGTATAAAGAGCGCTCCTCCCGCTTCAGGCCCTGCTACAGTACAAGGGCTGCTGAAGTaGGGGTATAATCCAAATCTT +
Preference number: 5 (lower is better)
Translates to: PCVLCIKSAPPASGPATVQGLLK*GYNPNL
Trigger: AAGATTTGGATTATACCCCAACTTCAGCAGCCCTTG...TACTGTAGCAGGGCCTGAAGCGGGAGGAGCGCTCTTTATACACAGCACACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTGGATCTCACGGTGGAGAAAGTGACTGTAGAGGAGGCTGTCCCTGCAGAACCCTGGATCTCTGTTTaGCAAATAACTTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: LVDLTVEKVTVEEAVPAEPWISV*QITWPF
Trigger: GAATGGCCAAGTTATTTGCAAAACAGAGATCCAGGG...TTCTGCAGGGACAGCCTCCTCTACAGTCACTTTCTCCACCGTGAGATCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGCCTTCTTGCTTGACATaGTCATCAATTGCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: APPASGPATVNSLYHRVQPSCLT*SSIAPN
Trigger: GTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGG...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCAAATGACCTGTTAATGTaGGTGGACAAACCACCAAGG +
Preference number: 5 (lower is better)
Translates to: AEYQQKVTELAAVAPGTANDLLM*VDKPPR
Trigger: CCTTGGTGGTTTGTCCACCAACATTAACAGGTCATT...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp TGTCTGAAGGTAGACAAGGCTTTCTACTACAGGAACCAGGGATGCTaGAGCAACAGCTCTAACATCGTCATCAAGGTCCTGGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: CLKVDKAFYYRNQGC*SNSSNIVIKVLESF
Trigger: GAAGGACTCCAGGACCTTGATGACGATGTTAGAGCTGTTGCTGCAGCATCCCTGGTTCCTGTAGTAGAAAGCCTTGTCTACCTTCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp TTGTGTCTGAAGGTAGACAAGGCTTTCTACTACAGGAACCAGGGATaGTGCAGCAACAGCTCTAACATCGTCATCAAGGTCCTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LCLKVDKAFYYRNQG*CSNSSNIVIKVLES
Trigger: GGACTCCAGGACCTTGATGACGATGTTAGAGCTGTTGCTGCAGCATCCCTGGTTCCTGTAGTAGAAAGCCTTGTCTACCTTCAGACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp TTTGATTGCTTTGGGGATGGGACCTCGCCTGCTGGTGATAGCAAATaGTGCTTTCTGATGCCTGTAGAGTGTAATGATCCCCCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: FDCFGDGTSPAGDSK*CFLMPVECNDPPVL
Trigger: AAGCACAGGGGGATCATTACACTCTACAGGCATCAGAAAGCAGCATTTGCTATCACCAGCAGGCGAGGTCCCATCCCCAAAGCAATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 90 bp AGCTGCCATCATCCTGGCCCTCATAACTACAAAATCTCTGGTCGCTaGGTCTTCCATGATGGTGTCTGCACCAGCAATATACTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SCHHPGPHNYKISGR*VFHDGVCTSNILLK
Trigger: CTTCAGGAGTATATTGCTGGTGCAGACACCATCATGGAAGACCCAGCGACCAGAGATTTTGTAGTTATGAGGGCCAGGATGATGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 90 bp TGCAAAACATCTTCTTTCATTCTTCTGAGAAGGAACGGCAGGACTTaGCGGTGCAGAGCGTCCATTGCCAGGACACCTGCTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: CKTSSFILLRRNGRT*RCRASIARTPASCS
Trigger: AGAACAAGAAGCAGGTGTCCTGGCAATGGACGCTCTGCACCGCCAAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAGATGTTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGAGCTGCTTTACTGCTTaGGACAACTTGGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: APPASGPATVNSLYHRVQSCFTA*DNLVFP
Trigger: TGGAAAAACCAAGTTGTCCAAAGCAGTAAAGCAGCT...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp GTGCTGTACCAGCAAGGGATGAAGTGCAGAGTCCATGGAAGCTGCTaGTATTTCAAACACTTGCAGGGAATTCACCAATTCTTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VLYQQGMKCRVHGSC*YFKHLQGIHQFLSR
Trigger: CCTGCTCAAGAATTGGTGAATTCCCTGCAAGTGTTTGAAATAGCAGCAGCTTCCATGGACTCTGCACTTCATCCCTTGCTGGTACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp TATTTTACTCATGACACCTATGCAACGAGCCGCCATGTGCCTCACTaGAGTGCTGGGGTACTGAAGGCACATATAAAGATGAGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: YFTHDTYATSRHVPH*SAGVLKAHIKMRQV
Trigger: CACTTGCCTCATCTTTATATGTGCCTTCAGTACCCCAGCACTGCAGTGAGGCACATGGCGGCTCGTTGCATAGGTGTCATGAGTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp AGGGTCTGGAATGCCTGCCTCAAGTGGCATCAGTCTAATCAGTGTTaGAAAGCACTGAGTAGCCATGAATCTCACACTGTCTGTCTGATC +
Preference number: 5 (lower is better)
Translates to: RVWNACLKWHQSNQC*KALSSHESHTVCLI
Trigger: GATCAGACAGACAGTGTGAGATTCATGGCTACTCAGTGCTTTGCAACACTGATTAGACTGATGCCACTTGAGGCAGGCATTCCAGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCACCATCCTTTTCTGAGTaGGATCCTTTAGAATTTTCC +
Preference number: 5 (lower is better)
Translates to: AEYQQKVTELAAVAPGTAPSFSE*DPLEFS
Trigger: GGAAAATTCTAAAGGATCCAACTCAGAAAAGGATGG...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp CCAAGCACTCATCCATGGGCATGCAGCTGCTACCAAATACTGAACTaGCGCCTTGCTCAAAAGCTCCATCCAAACCTTGTGAATAAGATC +
Preference number: 5 (lower is better)
Translates to: PSTHPWACSCYQILN*RLAQKLHPNLVNKI
Trigger: GATCTTATTCACAAGGTTTGGATGGAGCTTTTGAGCAAGGCGTCAGTTCAGTATTTGGTAGCAGCTGCATGCCCATGGATGAGTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp CAAGTGCTGTACCAGCAAGGGATGAAGTGCAGAGTCCATGGAAGCTaGTGCTATTTCAAACACTTGCAGGGAATTCACCAATTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: QVLYQQGMKCRVHGS*CYFKHLQGIHQFLS
Trigger: GCTCAAGAATTGGTGAATTCCCTGCAAGTGTTTGAAATAGCAGCAGCTTCCATGGACTCTGCACTTCATCCCTTGCTGGTACAGCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTAACTCTCTGTAGGTTCTaGTTTGGTTCTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVTLCRF*FGSWHW
Trigger: CCAGTGCCAAGAACCAAACAAGAACCTACAGAGAGT...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GCTCCTCCCGCTTCAGGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGCCATTCTTTTAGCTTaGTTCTTCTGTCTATTACTC +
Preference number: 5 (lower is better)
Translates to: APPASGPATVNSLYHRVQAILLA*FFCLLL
Trigger: GAGTAATAGACAGAAGAACAAAGCTAAAAGAATGGC...CTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCCTGAAGCGGGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGTCTCAGCTGCAGTACTaGCCACTCCTGGTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: LVELHDFSAKARHIFQCRSQLQY*PLLVRL
Trigger: GAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGA...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGAGGCATGGTGTCCTTGTaGTACACTGCTGAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRGMVSL*YTAEEA
Trigger: AGCTTCTTCAGCAGTGTACAACAAGGACACCATGCC...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGATGATCCCCCTGTGCTaGGTGACAGTATGGTGCATT +
Preference number: 5 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRMIPLC*VTVWCI
Trigger: AATGCACCATACTGTCACCAAGCACAGGGGGATCAT...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GCTGAATATCAGCAGAAGGTAACTGAGCTAGCAGCAGTTGCACCGGGCACGGCAATTGTGCCTTTTTACTaGATGTTGCAACCTTATCCT +
Preference number: 5 (lower is better)
Translates to: AEYQQKVTELAAVAPGTAIVPFY*MLQPYP
Trigger: AGGATAAGGTTGCAACATCAAGTAAAAAGGCACAAT...TGCCGTGCCCGGTGCAACTGCTGCTAGCTCAGTTACCTTCTGCTGATATTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGACTGTTGAATACTGCATaGCTGGACCTGAGGGTAAGT +
Preference number: 5 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRLLNTA*LDLRVS
Trigger: ACTTACCCTCAGGTCCAGCAATGCAGTATTCAACAG...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp GGCCCTGCTACAGTAAACAGTCTTTACCACAGGGTTCAGGGTTTAAGCAGTGTAGAGCTTAGGCGCGTGTaGAATATCATGAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: GPATVNSLYHRVQGLSSVELRRV*NIMKRR
Trigger: TCTTCTCTTCATGATATTCAACACGCGCCTAAGCTC...TACACTGCTTAAACCCTGAACCCTGTGGTAAAGACTGTTTACTGTAGCAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp TTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGAATGAAGGTCTCCAGGTaGTACTCCGAATCATACTGC +
Preference number: 5 (lower is better)
Translates to: LVPKPDTFSSVGWALSYRMKVSR*YSESYC
Trigger: GCAGTATGATTCGGAGTACAACCTGGAGACCTTCAT...TCTATATGACAGTGCCCACCCTACACTGGAAAATGTGTCTGGCTTTGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp TCCATTAATGGTTTTATGATAGGATTTAGTTTCTCCGGAAGCTGCTaGAAGCTCACAACAGCACACGCAGCAAACGTGTGTACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SINGFMIGFSFSGSC*KLTTAHAANVCTLS
Trigger: GCTGAGAGTACACACGTTTGCTGCGTGTGCTGTTGTGAGCTTGCAGCAGCTTCCGGAGAAACTAAATCCTATCATAAAACCATTAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp GCATCCCAAAGATGTGGCAACTTCACTGCCATTTCAGCACCAAAATaGTTCACTATAGTTGTTAAGGCAAATTCAGCTCCTCTCCGCTGT +
Preference number: 5 (lower is better)
Translates to: ASQRCGNFTAISAPK*FTIVVKANSAPLRC
Trigger: ACAGCGGAGAGGAGCTGAATTTGCCTTAACAACTATAGTGAAGCATTTTGGTGCTGAAATGGCAGTGAAGTTGCCACATCTTTGGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CCATATGCATCTGCATTAAATATACAAAGGTTGCCACAGGGCCTGGTTCAATTCTATAGCTTCAACAGCTaGTCCTGCTGCAATCCGGGT +
Preference number: 5 (lower is better)
Translates to: PYASALNIQRLPQGLVQFYSFNS*SCCNPG
Trigger: ACCCGGATTGCAGCAGGACAAGCTGTTGAAGCTATA...GAATTGAACCAGGCCCTGTGGCAACCTTTGTATATTTAATGCAGATGCATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTCCATCAGTGCTGTCATaGCTCTTCTCATTCGTTTCC +
Preference number: 5 (lower is better)
Translates to: LWNARFRITGWLSRLLKCPSVLS*LFSFVS
Trigger: GGAAACGAATGAGAAGAGCAATGACAGCACTGATGG...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 90 bp ACCAGGGATGCTGCAGCAACAGCTCTAACATCGTCATCAAGGTCCTaGAGTCCTTCGATTATTCGAGTTAAGACTTTAGGCAATAAAGTA +
Preference number: 5 (lower is better)
Translates to: TRDAAATALTSSSRS*SPSIIRVKTLGNKV
Trigger: TACTTTATTGCCTAAAGTCTTAACTCGAATAATCGAAGGACTCCAGGACCTTGATGACGATGTTAGAGCTGTTGCTGCAGCATCCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGGTCTTCCAACCACTCTaGATGCTGCTGAATCATCTC +
Preference number: 5 (lower is better)
Translates to: LVELHDFSAKARHIFQCRVFQPL*MLLNHL
Trigger: GAGATGATTCAGCAGCATCAAGAGTGGTTGGAAGAC...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAGGTTGCCACAGGGCCTGGTTCAATTCATTGCTTAACATTTTCAGGTCCTAGGTTCTTTATTCTGGATTaGACCTTGCCGTACCTTACC +
Preference number: 5 (lower is better)
Translates to: KVATGPGSIHCLTFSGPRFFILD*TLPYLT
Trigger: GGTAAGGTACGGCAAGGTCAAATCCAGAATAAAGAA...CCTAGGACCTGAAAATGTTAAGCAATGAATTGAACCAGGCCCTGTGGCAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTGGAATTCACCAATTCTaGAGCAGGAACATCACCTCT +
Preference number: 5 (lower is better)
Translates to: LWNARFRITGWLSRLLKCGIHQF*SRNITS
Trigger: AGAGGTGATGTTCCTGCTCAAGAATTGGTGAATTCC...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp GTAAAGAGAGTTTCCAATGCTGCTCTTCGAACTGAAGATATAGTGTaGTGCAAAAATGGCCAGACACGTGGGACTAAAACTGTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: VKRVSNAALRTEDIV*CKNGQTRGTKTVSD
Trigger: GTCACTCACAGTTTTAGTCCCACGTGTCTGGCCATTTTTGCATCACACTATATCTTCAGTTCGAAGAGCAGCATTGGAAACTCTCTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp GCTCTAGCTTTTACTTCCAGCAGCATATTTAAATCAATAGGTAAGTaGGAAGGCTGCATCATTAGGCAAAGCCAAGCACTCATCCATGGG +
Preference number: 5 (lower is better)
Translates to: ALAFTSSSIFKSIGK*EGCIIRQSQALIHG
Trigger: CCCATGGATGAGTGCTTGGCTTTGCCTAATGATGCAGCCTTCTCACTTACCTATTGATTTAAATATGCTGCTGGAAGTAAAAGCTAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp GGCTTGAGCAGATCATGTTCTACTATATCAAGCATGCTTTTAAGCTaGCAGAAGATCAGTATTCTGTGCTGTGCCACAACAGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: GLSRSCSTISSMLLS*QKISILCCATTDSV
Trigger: CACAGAGTCTGTTGTGGCACAGCACAGAATACTGATCTTCTGTCAGCTTAAAAGCATGCTTGATATAGTAGAACATGATCTGCTCAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 90 bp AATACCGACATCCAATTGTTCCATAACACAGGCAAGTGCTTCAATTaGACCTTCTTGCTTGACATTGTCATCAATTGCTCCCAACCAAGG +
Preference number: 5 (lower is better)
Translates to: NTDIQLFHNTGKCFN*TFLLDIVINCSQPR
Trigger: CCTTGGTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCCTGTGTTATGGAACAATTGGATGTCGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 90 bp ATCTTCCATAGAACTCTCTGTAGGTTCTTGTTTGGTTCTTGGCACTaGATTCCACTCAGGCACGTTTTTCACTATAGCTTCAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: IFHRTLCRFLFGSWH*IPLRHVFHYSFNSL
Trigger: CAAGCTGTTGAAGCTATAGTGAAAAACGTGCCTGAGTGGAATCCAGTGCCAAGAACCAAACAAGAACCTACAGAGAGTTCTATGGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 90 bp GTCAATCATAGACTTCAATGGGCCAACCATAGCATCCCAAAGATGTaGCAACTTCACTGCCATTTCAGCACCAAAATGCTTCACTATAGT +
Preference number: 5 (lower is better)
Translates to: VNHRLQWANHSIPKM*QLHCHFSTKMLHYS
Trigger: ACTATAGTGAAGCATTTTGGTGCTGAAATGGCAGTGAAGTTGCCACATCTTTGGGATGCTATGGTTGGCCCATTGAAGTCTATGATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGAATTCTGGATTTGACCTaGCCGTACCTTACCACCTGT +
Preference number: 5 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRILDLT*PYLTTC
Trigger: ACAGGTGGTAAGGTACGGCAAGGTCAAATCCAGAAT...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTCTGCCAATTTCGATCTaGCATATTCCTGGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFLPISI*HIPGPS
Trigger: AGAGGGCCCAGGAATATGCAAGATCGAAATTGGCAG...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGCTCGCTAATATAGGTTaGCCATATCGAGCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: LVELHDFSAKARHIFQCRLANIG*PYRAAN
Trigger: GTTTGCTGCTCGATATGGCAAACCTATATTAGCGAG...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGTCATCAACATCACACTaGGCACGCGACTTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: LVELHDFSAKARHIFQCRSSTSH*ARDLAK
Trigger: TTTTGCTAAGTCGCGTGCCAAGTGTGATGTTGATGA...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp ACATTTTCCAGTGTAGGGTGGGCACTGTCATATAGATACAAGTATCCTTGTGTGACCAGTGCTGGATGGTaGCAGAGCTTACGTAAATAT +
Preference number: 5 (lower is better)
Translates to: TFSSVGWALSYRYKYPCVTSAGW*QSLRKY
Trigger: ATATTTACGTAAGCTCTGCAACCATCCAGCACTGGT...CACACAAGGATACTTGTATCTATATGACAGTGCCCACCCTACACTGGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp GTATGGGTCCACACAAAGAGAGCTACAGAGGTTCTTAATAACTTTTaGATTAGGGCATGGTGTCCTTGTTGTACACTGCTGAAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: VWVHTKRATEVLNNF*IRAWCPCCTLLKKL
Trigger: AAGCTTCTTCAGCAGTGTACAACAAGGACACCATGCCCTAATTCAAAAGTTATTAAGAACCTCTGTAGCTCTCTTTGTGTGGACCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 90 bp CCATCTAACAATTGCTCTAAAAAGTGTCGCTCTTTTGCTTTCAACTaGATTAATTCTTCTGACATGTTTGGAGGGTCTGGAATGCCTGCC +
Preference number: 5 (lower is better)
Translates to: PSNNCSKKCRSFAFN*INSSDMFGGSGMPA
Trigger: GGCAGGCATTCCAGACCCTCCAAACATGTCAGAAGAATTAATCCAGTTGAAAGCAAAAGAGCGACACTTTTTAGAGCAATTGTTAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 90 bp GCATCCCTACTCGCTAATATAGGTTTGCCATATCGAGCAGCAAACTaGCGTTCAGTACCCAAAAATCCAGGCATAAGGAAATCAAATAAT +
Preference number: 5 (lower is better)
Translates to: ASLLANIGLPYRAAN*RSVPKNPGIRKSNN
Trigger: ATTATTTGATTTCCTTATGCCTGGATTTTTGGGTACTGAACGCCAGTTTGCTGCTCGATATGGCAAACCTATATTAGCGAGTAGGGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGAAATGGAGGGTACCTTTaGTGTCTGAAGGTAGACAAG +
Preference number: 5 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRNGGYL*CLKVDK
Trigger: CTTGTCTACCTTCAGACACAAAAGGTACCCTCCATT...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTCTCTGCAACTGTCATTaGGACCTGATGCCGTTTACT +
Preference number: 5 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFLCNCH*DLMPFT
Trigger: AGTAAACGGCATCAGGTCCAAATGACAGTTGCAGAG...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp CAATTCAGCTGCTTGGAGAGTAGATTGTTTGTTTACAAGGGCTGCTaGAGTTGGGGTATAATCCAAATCTTCATCGTTGAAGAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QFSCLESRLFVYKGC*SWGIIQIFIVEEFF
Trigger: GAAGAACTCTTCAACGATGAAGATTTGGATTATACCCCAACTTCAGCAGCCCTTGTAAACAAACAATCTACTCTCCAAGCAGCTGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTTGCTTGGAGAGTAGATaGTTTGTTTACAAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFCLESR*FVYKGC
Trigger: GCAGCCCTTGTAAACAAACAATCTACTCTCCAAGCA...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp TTGTGGAATGCTAGGTTCAGGATTACAGGATGGTTGTCAAGGCTACTCAAGTGTAATCAATTCAGCTGCTaGGAGAGTAGATTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LWNARFRITGWLSRLLKCNQFSC*ESRLFV
Trigger: AACAAACAATCTACTCTCCAAGCAGCTGAATTGATT...ACACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp CACTGTTCTTGTGTCAATAATTTCAGCAGCACATCCACTGTCTTATaGACTCCTGTTTCGTTCATGTGCTTTAAAACCACACCTAACGTT +
Preference number: 5 (lower is better)
Translates to: HCSCVNNFSSTSTVL*TPVSFMCFKTTPNV
Trigger: AACGTTAGGTGTGGTTTTAAAGCACATGAACGAAACAGGAGTTCATAAGACAGTGGATGTGCTGCTGAAATTATTGACACAAGAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGACCAAAGGCCATTCATTaGTCTCTTCAATTAAGGAAG +
Preference number: 5 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRPKAIH*SLQLRK
Trigger: CTTCCTTAATTGAAGAGACAAATGAATGGCCTTTGG...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp CTGGTAGAACTACATGATTTTAGTGCCAAAGCCAGACACATTTTCCAGTGTAGGTGGTTACCAGGTCGTTaGCTTGATCTATTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: LVELHDFSAKARHIFQCRWLPGR*LDLLLK
Trigger: TTTTAACAATAGATCAAGCAAACGACCTGGTAACCA...CCTACACTGGAAAATGTGTCTGGCTTTGGCACTAAAATCATGTAGTTCTACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTTCCAAATCTTCATCGTaGAAGAGTTCTTCAGTACTC +
Preference number: 5 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFSKSSS*KSSSVL
Trigger: GAGTACTGAAGAACTCTTCAACGATGAAGATTTGGA...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTATTGCACCTTCTTGCTaGACATTGTCATCAATTGCT +
Preference number: 5 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFIAPSC*TLSSIA
Trigger: AGCAATTGATGACAATGTCAAGCAAGAAGGTGCAAT...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp ATTGTACAATTGAGGTCTGATGGTTTTAAGTTGATGTCTGGGTGTAGGACCAGATTCAATTGCACCTTCTaGCTTGACATTGTCATCAAT +
Preference number: 5 (lower is better)
Translates to: IVQLRSDGFKLMSGCRTRFNCTF*LDIVIN
Trigger: ATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAA...TCTGGTCCTACACCCAGACATCAACTTAAAACCATCAGACCTCAATTGTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS-3UTR CAA 90 bp AAACCTGGCTGCTTCCTGTCTGCAGCTATTCAGCATGTAAAATTTAAACCTTTTTTTGCGATGTTCATCTaGAATTTCTGCAAGCCCATT +
Preference number: 5 (lower is better)
Translates to: KPGCFLSAAIQHVKFKPFFAMFI*NFCKPI
Trigger: AATGGGCTTGCAGAAATTCAAGATGAACATCGCAAA...AAAAGGTTTAAATTTTACATGCTGAATAGCTGCAGACAGGAAGCAGCCAGGTTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 90 bp TTTAGCTTTGTTCTTCTGTCTATTACTCATTCCTGCTCGGAATTCTaGATCAATCAATTCAGCTGCTTGGAGAGTAGATTGTTTGTTTAC +
Preference number: 5 (lower is better)
Translates to: FSFVLLSITHSCSEF*INQFSCLESRLFVY
Trigger: GTAAACAAACAATCTACTCTCCAAGCAGCTGAATTGATTGATTCAGAATTCCGAGCAGGAATGAGTAATAGACAGAAGAACAAAGCTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp GCGGTGCAGAGCGTCCATTGCCAGGACACCTGCTTCTaGTTCTCGACTGGAGCTTCGTGCATCCCTACTCGC +
Preference number: 6 (lower is better)
Translates to: AVQSVHCQDTCF*FSTGASCIPTR
Trigger: GCGAGTAGGGATGCACGAAGCTCCAGTCGAGAACAAGAAGCAGGTGTCCTGGCAATGGACGCTCTGCACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp TCAGCTCCAGTCAAGTTCAGGCCCAGGCCACCAACGTaGGTTGTGAGTAGAAGAACATCGATGGAGGGGTCG +
Preference number: 6 (lower is better)
Translates to: SAPVKFRPRPPT*VVSRRTSMEGS
Trigger: CGACCCCTCCATCGATGTTCTTCTACTCACAACTCACGTTGGTGGCCTGGGCCTGAACTTGACTGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp GGGGATGGGACCTCGCCTGCTGGTGATAGCAAATGCTaGTTTCTGATGCCTGTAGAGTGTAATGATCCCCCT +
Preference number: 6 (lower is better)
Translates to: GDGTSPAGDSKC*FLMPVECNDPP
Trigger: AGGGGGATCATTACACTCTACAGGCATCAGAAAGCAGCATTTGCTATCACCAGCAGGCGAGGTCCCATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp CACCTATGCAACGAGCCGCCATGTGCCTCACTGCAGTaGTGGGGTACTGAAGGCACATATAAAGATGAGGCA +
Preference number: 6 (lower is better)
Translates to: HLCNEPPCASLQ*WGTEGTYKDEA
Trigger: TGCCTCATCTTTATATGTGCCTTCAGTACCCCAGCACTGCAGTGAGGCACATGGCGGCTCGTTGCATAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp TTCATTCTTCTGAGAAGGAACGGCAGGACTTGGCGGTaGAGAGCGTCCATTGCCAGGACACCTGCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: FILLRRNGRTWR*RASIARTPASC
Trigger: ACAAGAAGCAGGTGTCCTGGCAATGGACGCTCTGCACCGCCAAGTCCTGCCGTTCCTTCTCAGAAGAATGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp TCCATGGCCTGCAGATCTCGCATAGGGTTCCAGTCATaGTCCACAAACACCACAGTGTCAGCTCCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: SMACRSRIGFQS*STNTTVSAPVK
Trigger: CTTGACTGGAGCTGACACTGTGGTGTTTGTGGAGCATGACTGGAACCCTATGCGAGATCTGCAGGCCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp CGCATGAAGGTCTCCAGGTTGTACTCCGAATCATACTaGTCGGCGTCCCAGAGGTCACTCAGGTTCTCAAGA +
Preference number: 6 (lower is better)
Translates to: RMKVSRLYSESY*SASQRSLRFSR
Trigger: TCTTGAGAACCTGAGTGACCTCTGGGACGCCGAGCAGTATGATTCGGAGTACAACCTGGAGACCTTCATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp TCTTCTTTCATTCTTCTGAGAAGGAACGGCAGGACTTaGCGGTGCAGAGCGTCCATTGCCAGGACACCTGCT +
Preference number: 6 (lower is better)
Translates to: SSFILLRRNGRT*RCRASIARTPA
Trigger: AGCAGGTGTCCTGGCAATGGACGCTCTGCACCGCCAAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp ATCTTCTTTCATTCTTCTGAGAAGGAACGGCAGGACTaGGCGGTGCAGAGCGTCCATTGCCAGGACACCTGC +
Preference number: 6 (lower is better)
Translates to: IFFHSSEKERQD*AVQSVHCQDTC
Trigger: GCAGGTGTCCTGGCAATGGACGCTCTGCACCGCCAAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp CTCGGCGTCCCAGAGGTCACTCAGGTTCTCAAGAACTaGTTTCATGCTTGCTTTCCCAGAAGTGGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: LGVPEVTQVLKN*FHACFPRSGAV
Trigger: GACAGCTCCACTTCTGGGAAAGCAAGCATGAAATCAGTTCTTGAGAACCTGAGTGACCTCTGGGACGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp CACGCAGCAAACGTGTGTACTCTCAGCTGCAGTACTTaGCACTCCTGGTTCGTCTCTGCAACTGTCATTTGG +
Preference number: 6 (lower is better)
Translates to: HAANVCTLSCST*HSWFVSATVIW
Trigger: CCAAATGACAGTTGCAGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGAGTACACACGTTTGCTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp ACAACAGCACACGCAGCAAACGTGTGTACTCTCAGCTaGAGTACTTGCCACTCCTGGTTCGTCTCTGCAACT +
Preference number: 6 (lower is better)
Translates to: TTAHAANVCTLS*STCHSWFVSAT
Trigger: AGTTGCAGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGAGTACACACGTTTGCTGCGTGTGCTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp CATGACACCTATGCAACGAGCCGCCATGTGCCTCACTaGAGTGCTGGGGTACTGAAGGCACATATAAAGATG +
Preference number: 6 (lower is better)
Translates to: HDTYATSRHVPH*SAGVLKAHIKM
Trigger: CATCTTTATATGTGCCTTCAGTACCCCAGCACTGCAGTGAGGCACATGGCGGCTCGTTGCATAGGTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp ATGGAGGGGTCGTTGTTAAACCGGGAAACAATGGAATaGCGCTGTCCAGGAGGTATGCTGCCATCTAGTCTC +
Preference number: 6 (lower is better)
Translates to: MEGSLLNRETME*RCPGGMLPSSL
Trigger: GAGACTAGATGGCAGCATACCTCCTGGACAGCGGCATTCCATTGTTTCCCGGTTTAACAACGACCCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp CACAACAGCACACGCAGCAAACGTGTGTACTCTCAGCTGCAGTACTaGCCACTCCTGGTTCGTCTCTGCAACTGTCATTTGGACCTGATG +
Preference number: 6 (lower is better)
Translates to: HNSTRSKRVYSQLQY*PLLVRLCNCHLDLM
Trigger: CATCAGGTCCAAATGACAGTTGCAGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGAGTACACACGTTTGCTGCGTGTGCTGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp CTGCAAAACATCTTCTTTCATTCTTCTGAGAAGGAACGGCAGGACTaGGCGGTGCAGAGCGTCCATTGCCAGGACACCTGCTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LQNIFFHSSEKERQD*AVQSVHCQDTCFLF
Trigger: GAACAAGAAGCAGGTGTCCTGGCAATGGACGCTCTGCACCGCCAAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAGATGTTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp GCACTCATCCATGGGCATGCAGCTGCTACCAAATACTaGACTGACGCCTTGCTCAAAAGCTCCATCCAAACC +
Preference number: 6 (lower is better)
Translates to: ALIHGHAAATKY*TDALLKSSIQT
Trigger: GGTTTGGATGGAGCTTTTGAGCAAGGCGTCAGTTCAGTATTTGGTAGCAGCTGCATGCCCATGGATGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp ATAGTCCCACTACTTCCTGCAGGTAGATCTGCTATCTaGGCTTTGATTGCTTTGGGGATGGGACCTCGCCTG +
Preference number: 6 (lower is better)
Translates to: IVPLLPAGRSAI*ALIALGMGPRL
Trigger: CAGGCGAGGTCCCATCCCCAAAGCAATCAAAGCTCAGATAGCAGATCTACCTGCAGGAAGTAGTGGGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp ACACGCAGCAAACGTGTGTACTCTCAGCTGCAGTACTaGCCACTCCTGGTTCGTCTCTGCAACTGTCATTTG +
Preference number: 6 (lower is better)
Translates to: TRSKRVYSQLQY*PLLVRLCNCHL
Trigger: CAAATGACAGTTGCAGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGAGTACACACGTTTGCTGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp CTGGAGCTTCGTGCATCCCTACTCGCTAATATAGGTTaGCCATATCGAGCAGCAAACTGGCGTTCAGTACCC +
Preference number: 6 (lower is better)
Translates to: LELRASLLANIG*PYRAANWRSVP
Trigger: GGGTACTGAACGCCAGTTTGCTGCTCGATATGGCAAACCTATATTAGCGAGTAGGGATGCACGAAGCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp CATCCATGGGCATGCAGCTGCTACCAAATACTGAACTaGCGCCTTGCTCAAAAGCTCCATCCAAACCTTGTG +
Preference number: 6 (lower is better)
Translates to: HPWACSCYQILN*RLAQKLHPNLV
Trigger: CACAAGGTTTGGATGGAGCTTTTGAGCAAGGCGTCAGTTCAGTATTTGGTAGCAGCTGCATGCCCATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp GTGGAAGATCCTGCAAAACATCTTCTTTCATTCTTCTaGGAAGGAACGGCAGGACTTGGCGGTGCAGAGCGT +
Preference number: 6 (lower is better)
Translates to: VEDPAKHLLSFF*EGTAGLGGAER
Trigger: ACGCTCTGCACCGCCAAGTCCTGCCGTTCCTTCTCAGAAGAATGAAAGAAGATGTTTTGCAGGATCTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp GTAGACAAGGCTTTCTACTACAGGAACCAGGGATGCTaGAGCAACAGCTCTAACATCGTCATCAAGGTCCTG +
Preference number: 6 (lower is better)
Translates to: VDKAFYYRNQGC*SNSSNIVIKVL
Trigger: CAGGACCTTGATGACGATGTTAGAGCTGTTGCTGCAGCATCCCTGGTTCCTGTAGTAGAAAGCCTTGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp TCTCAGCTGCAGTACTTGCCACTCCTGGTTCGTCTCTaGAACTGTCATTTGGACCTGATGCCGTTTACTATC +
Preference number: 6 (lower is better)
Translates to: SQLQYLPLLVRL*NCHLDLMPFTI
Trigger: GATAGTAAACGGCATCAGGTCCAAATGACAGTTGCAGAGACGAACCAGGAGTGGCAAGTACTGCAGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp CCCATGAGCTTTAAGAATTTCTCTGAGTCCAGTACCTaGCCCATGTCGAACCTCCCAGGAGGGATTAAAAAG +
Preference number: 6 (lower is better)
Translates to: PMSFKNFSESST*PMSNLPGGIKK
Trigger: CTTTTTAATCCCTCCTGGGAGGTTCGACATGGGGCAGGTACTGGACTCAGAGAAATTCTTAAAGCTCATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp AAGGTAGACAAGGCTTTCTACTACAGGAACCAGGGATaGTGCAGCAACAGCTCTAACATCGTCATCAAGGTC +
Preference number: 6 (lower is better)
Translates to: KVDKAFYYRNQG*CSNSSNIVIKV
Trigger: GACCTTGATGACGATGTTAGAGCTGTTGCTGCAGCATCCCTGGTTCCTGTAGTAGAAAGCCTTGTCTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp TGGACAAACCACCAAGGAAGGAAGTGGCATACATTCTaGCAATTTCGATCTTGCATATTCCTGGGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: WTNHQGRKWHTF*QFRSCIFLGPL
Trigger: CAGAGGGCCCAGGAATATGCAAGATCGAAATTGGCAGAATGTATGCCACTTCCTTCCTTGGTGGTTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp TCCTTTAGAATTTTCCTGGCCACTTTGTGTTGGTACTaGACACGTAACACAGGGAGTGAGGTATGGGTCCAC +
Preference number: 6 (lower is better)
Translates to: SFRIFLATLCWY*TRNTGSEVWVH
Trigger: GTGGACCCATACCTCACTCCCTGTGTTACGTGTCCAGTACCAACACAAAGTGGCCAGGAAAATTCTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp AGGAAGGAAGTGGCATACATTCTGCCAATTTCGATCTaGCATATTCCTGGGCCCTCTGACAGTGATCTCCTG +
Preference number: 6 (lower is better)
Translates to: RKEVAYILPISI*HIPGPSDSDLL
Trigger: CAGGAGATCACTGTCAGAGGGCCCAGGAATATGCAAGATCGAAATTGGCAGAATGTATGCCACTTCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp TGTTCTCGACTGGAGCTTCGTGCATCCCTACTCGCTAATATAGGTTaGCCATATCGAGCAGCAAACTGGCGTTCAGTACCCAAAAATCCA +
Preference number: 6 (lower is better)
Translates to: CSRLELRASLLANIG*PYRAANWRSVPKNP
Trigger: TGGATTTTTGGGTACTGAACGCCAGTTTGCTGCTCGATATGGCAAACCTATATTAGCGAGTAGGGATGCACGAAGCTCCAGTCGAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp GATGCAAAAATGGCCAGACACGTGGGACTAAAACTGTaGGTGACTGTTGAATACTGCATTGCTGGACCTGAG +
Preference number: 6 (lower is better)
Translates to: DAKMARHVGLKL*VTVEYCIAGPE
Trigger: CTCAGGTCCAGCAATGCAGTATTCAACAGTCACTCACAGTTTTAGTCCCACGTGTCTGGCCATTTTTGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp ATGAGGATGAAGCTTCACCACTTCTCCAAGTTGCTGTaGAGCAGCCTTTCTTGTAACTGGAGTAGTACCAGT +
Preference number: 6 (lower is better)
Translates to: MRMKLHHFSKLL*SSLSCNWSSTS
Trigger: ACTGGTACTACTCCAGTTACAAGAAAGGCTGCTGCACAGCAACTTGGAGAAGTGGTGAAGCTTCATCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp GGTTTTATGATAGGATTTAGTTTCTCCGGAAGCTGCTaGAAGCTCACAACAGCACACGCAGCAAACGTGTGT +
Preference number: 6 (lower is better)
Translates to: GFMIGFSFSGSC*KLTTAHAANVC
Trigger: ACACACGTTTGCTGCGTGTGCTGTTGTGAGCTTGCAGCAGCTTCCGGAGAAACTAAATCCTATCATAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp CAGCAAGGGATGAAGTGCAGAGTCCATGGAAGCTGCTaGTATTTCAAACACTTGCAGGGAATTCACCAATTC +
Preference number: 6 (lower is better)
Translates to: QQGMKCRVHGSC*YFKHLQGIHQF
Trigger: GAATTGGTGAATTCCCTGCAAGTGTTTGAAATAGCAGCAGCTTCCATGGACTCTGCACTTCATCCCTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp TACCAGCAAGGGATGAAGTGCAGAGTCCATGGAAGCTaGTGCTATTTCAAACACTTGCAGGGAATTCACCAA +
Preference number: 6 (lower is better)
Translates to: YQQGMKCRVHGS*CYFKHLQGIHQ
Trigger: TTGGTGAATTCCCTGCAAGTGTTTGAAATAGCAGCAGCTTCCATGGACTCTGCACTTCATCCCTTGCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp AATGCCTGCCTCAAGTGGCATCAGTCTAATCAGTGTTaGAAAGCACTGAGTAGCCATGAATCTCACACTGTC +
Preference number: 6 (lower is better)
Translates to: NACLKWHQSNQC*KALSSHESHTV
Trigger: GACAGTGTGAGATTCATGGCTACTCAGTGCTTTGCAACACTGATTAGACTGATGCCACTTGAGGCAGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp CTGGATGCTGAGGGGTTAAGACCAGTGCTGGATGGTTaGAGAGCTTACGTAAATATTGTAACGCCTGGAATA +
Preference number: 6 (lower is better)
Translates to: LDAEGLRPVLDG*RAYVNIVTPGI
Trigger: TATTCCAGGCGTTACAATATTTACGTAAGCTCTGCAACCATCCAGCACTGGTCTTAACCCCTCAGCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp GCTGCAGCAACAGCTCTAACATCGTCATCAAGGTCCTaGAGTCCTTCGATTATTCGAGTTAAGACTTTAGGC +
Preference number: 6 (lower is better)
Translates to: AAATALTSSSRS*SPSIIRVKTLG
Trigger: GCCTAAAGTCTTAACTCGAATAATCGAAGGACTCCAGGACCTTGATGACGATGTTAGAGCTGTTGCTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp TGTTGGTACTGGACACGTAACACAGGGAGTGAGGTATaGGTCCACACAAAGAGAGCTACAGAGGTTCTTAAT +
Preference number: 6 (lower is better)
Translates to: CWYWTRNTGSEV*VHTKRATEVLN
Trigger: ATTAAGAACCTCTGTAGCTCTCTTTGTGTGGACCCATACCTCACTCCCTGTGTTACGTGTCCAGTACCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp CCACTCAGGCACGTTTTTCACTATAGCTTCAACAGCTaGTCCTGCTGCAATCCGGGTATCCCAATTTGTACT +
Preference number: 6 (lower is better)
Translates to: PLRHVFHYSFNS*SCCNPGIPICT
Trigger: AGTACAAATTGGGATACCCGGATTGCAGCAGGACAAGCTGTTGAAGCTATAGTGAAAAACGTGCCTGAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp AATGGTTTTATGATAGGATTTAGTTTCTCCGGAAGCTaGTGCAAGCTCACAACAGCACACGCAGCAAACGTG +
Preference number: 6 (lower is better)
Translates to: NGFMIGFSFSGS*CKLTTAHAANV
Trigger: CACGTTTGCTGCGTGTGCTGTTGTGAGCTTGCAGCAGCTTCCGGAGAAACTAAATCCTATCATAAAACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp AGACTTCAATGGGCCAACCATAGCATCCCAAAGATGTaGCAACTTCACTGCCATTTCAGCACCAAAATGCTT +
Preference number: 6 (lower is better)
Translates to: RLQWANHSIPKM*QLHCHFSTKML
Trigger: AAGCATTTTGGTGCTGAAATGGCAGTGAAGTTGCCACATCTTTGGGATGCTATGGTTGGCCCATTGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp CAGGCAAGTGCTTCAATTGCACCTTCTTGCTTGACATaGTCATCAATTGCTCCCAACCAAGGAAGTACCTTC +
Preference number: 6 (lower is better)
Translates to: QASASIAPSCLT*SSIAPNQGSTF
Trigger: GAAGGTACTTCCTTGGTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp GCTATTTCAAACACTTGCAGGGAATTCACCAATTCTTaGGCAGGAACATCACCTCTTTCCAGGAGGGACTTT +
Preference number: 6 (lower is better)
Translates to: AISNTCREFTNS*AGTSPLSRRDF
Trigger: AAAGTCCCTCCTGGAAAGAGGTGATGTTCCTGCTCAAGAATTGGTGAATTCCCTGCAAGTGTTTGAAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp AAAATCTCTGGTCGCTGGGTCTTCCATGATGGTGTCTaGACCAGCAATATACTCCTGAAGCACTTCTTTATT +
Preference number: 6 (lower is better)
Translates to: KISGRWVFHDGV*TSNILLKHFFI
Trigger: AATAAAGAAGTGCTTCAGGAGTATATTGCTGGTGCAGACACCATCATGGAAGACCCAGCGACCAGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp AGTGTAATGATCCCCCTGTGCTTGGTGACAGTATGGTaGATTCCATCCTTTTCTGAGTTGGATCCTTTAGAA +
Preference number: 6 (lower is better)
Translates to: SVMIPLCLVTVW*IPSFSELDPLE
Trigger: TTCTAAAGGATCCAACTCAGAAAAGGATGGAATGCACCATACTGTCACCAAGCACAGGGGGATCATTACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp GCCAACCATAGCATCCCAAAGATGTGGCAACTTCACTaGCATTTCAGCACCAAAATGCTTCACTATAGTTGT +
Preference number: 6 (lower is better)
Translates to: ANHSIPKMWQLH*HFSTKMLHYSC
Trigger: ACAACTATAGTGAAGCATTTTGGTGCTGAAATGGCAGTGAAGTTGCCACATCTTTGGGATGCTATGGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp CTCGCTAATATAGGTTTGCCATATCGAGCAGCAAACTaGCGTTCAGTACCCAAAAATCCAGGCATAAGGAAA +
Preference number: 6 (lower is better)
Translates to: LANIGLPYRAAN*RSVPKNPGIRK
Trigger: TTTCCTTATGCCTGGATTTTTGGGTACTGAACGCCAGTTTGCTGCTCGATATGGCAAACCTATATTAGCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp CCATGTCGAACCTCCCAGGAGGGATTAAAAAGGTCATaGCAAAGTTCTTCACAAAAGCTTTCCAAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: PCRTSQEGLKRS*QSSSQKLSKGH
Trigger: ATGGCCTTTGGAAAGCTTTTGTGAAGAACTTTGCAATGACCTTTTTAATCCCTCCTGGGAGGTTCGACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp TGCTATTTCAAACACTTGCAGGGAATTCACCAATTCTaGAGCAGGAACATCACCTCTTTCCAGGAGGGACTT +
Preference number: 6 (lower is better)
Translates to: CYFKHLQGIHQF*SRNITSFQEGL
Trigger: AAGTCCCTCCTGGAAAGAGGTGATGTTCCTGCTCAAGAATTGGTGAATTCCCTGCAAGTGTTTGAAATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp TTCCATAACACAGGCAAGTGCTTCAATTGCACCTTCTaGCTTGACATTGTCATCAATTGCTCCCAACCAAGG +
Preference number: 6 (lower is better)
Translates to: FHNTGKCFNCTF*LDIVINCSQPR
Trigger: CCTTGGTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCCTGTGTTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp AATTGTTCCATAACACAGGCAAGTGCTTCAATTGCACCTTCTTGCTaGACATTGTCATCAATTGCTCCCAACCAAGGAAGTACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: NCSITQASASIAPSC*TLSSIAPNQGSTFS
Trigger: GGAGAAGGTACTTCCTTGGTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCCTGTGTTATGGAACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp GTTTCCAATGCTGCTCTTCGAACTGAAGATATAGTGTaGTGCAAAAATGGCCAGACACGTGGGACTAAAACT +
Preference number: 6 (lower is better)
Translates to: VSNAALRTEDIV*CKNGQTRGTKT
Trigger: AGTTTTAGTCCCACGTGTCTGGCCATTTTTGCATCACACTATATCTTCAGTTCGAAGAGCAGCATTGGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp TCATATGAGGCTACTATCAGATTGTGCCTTTTTACTTaGTGTTGCAACCTTATCCTTTCAGTGGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: SYEATIRLCLFT*CCNLILSVGGP
Trigger: TGGCCCTCCCACTGAAAGGATAAGGTTGCAACATCAAGTAAAAAGGCACAATCTGATAGTAGCCTCATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp ATAACACAGGCAAGTGCTTCAATTGCACCTTCTTGCTaGACATTGTCATCAATTGCTCCCAACCAAGGAAGT +
Preference number: 6 (lower is better)
Translates to: ITQASASIAPSC*TLSSIAPNQGS
Trigger: ACTTCCTTGGTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCCTGTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp ATTTACCTACTTCATCTACCCAATGACCTGTTAATGTaGGTGGACAAACCACCAAGGAAGGAAGTGGCATAC +
Preference number: 6 (lower is better)
Translates to: IYLLHLPNDLLM*VDKPPRKEVAY
Trigger: GTATGCCACTTCCTTCCTTGGTGGTTTGTCCACCAACATTAACAGGTCATTGGGTAGATGAAGTAGGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp ATCCAATTGTTCCATAACACAGGCAAGTGCTTCAATTGCACCTTCTaGCTTGACATTGTCATCAATTGCTCCCAACCAAGGAAGTACCTT +
Preference number: 6 (lower is better)
Translates to: IQLFHNTGKCFNCTF*LDIVINCSQPRKYL
Trigger: AAGGTACTTCCTTGGTTGGGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCCTGTGTTATGGAACAATTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp TGGAACAAAATTTACCTACTTCATCTACCCAATGACCTGTTAATGTaGGTGGACAAACCACCAAGGAAGGAAGTGGCATACATTCTGCCA +
Preference number: 6 (lower is better)
Translates to: WNKIYLLHLPNDLLM*VDKPPRKEVAYILP
Trigger: TGGCAGAATGTATGCCACTTCCTTCCTTGGTGGTTTGTCCACCAACATTAACAGGTCATTGGGTAGATGAAGTAGGTAAATTTTGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp CACACAAAGAGAGCTACAGAGGTTCTTAATAACTTTTaGATTAGGGCATGGTGTCCTTGTTGTACACTGCTG +
Preference number: 6 (lower is better)
Translates to: HTKRATEVLNNF*IRAWCPCCTLL
Trigger: CAGCAGTGTACAACAAGGACACCATGCCCTAATTCAAAAGTTATTAAGAACCTCTGTAGCTCTCTTTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp AGATGTGGCAACTTCACTGCCATTTCAGCACCAAAATaGTTCACTATAGTTGTTAAGGCAAATTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: RCGNFTAISAPK*FTIVVKANSAP
Trigger: AGGAGCTGAATTTGCCTTAACAACTATAGTGAAGCATTTTGGTGCTGAAATGGCAGTGAAGTTGCCACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp ATCCAATTGTTCCATAACACAGGCAAGTGCTTCAATTaGACCTTCTTGCTTGACATTGTCATCAATTGCTCC +
Preference number: 6 (lower is better)
Translates to: IQLFHNTGKCFN*TFLLDIVINCS
Trigger: GGAGCAATTGATGACAATGTCAAGCAAGAAGGTGCAATTGAAGCACTTGCCTGTGTTATGGAACAATTGGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp TGCTTGGAGAGTAGATTGTTTGTTTACAAGGGCTGCTaGAGTTGGGGTATAATCCAAATCTTCATCGTTGAA +
Preference number: 6 (lower is better)
Translates to: CLESRLFVYKGC*SWGIIQIFIVE
Trigger: TTCAACGATGAAGATTTGGATTATACCCCAACTTCAGCAGCCCTTGTAAACAAACAATCTACTCTCCAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp TGTCATCACACAGAATTCCATGAAGCTTATACTTATTaGGAAAGGCTAACCAGTTCACACCATCCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: CHHTEFHEAYTY*ERLTSSHHPAD
Trigger: ATCAGCAGGATGGTGTGAACTGGTTAGCCTTTCTCAATAAGTATAAGCTTCATGGAATTCTGTGTGATGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS GCA 72 bp TACAAATGTTCTGAAAGGATATCAAGTAAACGCGGTTaGACAGCTAGGGTAACAGCTTTACACTCCTTTTGT +
Preference number: 6 (lower is better)
Translates to: YKCSERISSKRG*TARVTALHSFC
Trigger: ACAAAAGGAGTGTAAAGCTGTTACCCTAGCTGTGCAACCGCGTTTACTTGATATCCTTTCAGAACATTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp TCCCTGGATCTCTGTTTTGCAAATAACTTGGCCATTCTTTTAGCTTaGTTCTTCTGTCTATTACTCATTCCTGCTCGGAATTCTGAATCA +
Preference number: 6 (lower is better)
Translates to: SLDLCFANNLAILLA*FFCLLLIPARNSES
Trigger: TGATTCAGAATTCCGAGCAGGAATGAGTAATAGACAGAAGAACAAAGCTAAAAGAATGGCCAAGTTATTTGCAAAACAGAGATCCAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp CTAACTTCTTCCCATCTAACAATTGCTCTAAAAAGTGTCGCTCTTTaGCTTTCAACTGGATTAATTCTTCTGACATGTTTGGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: LTSSHLTIALKSVAL*LSTGLILLTCLEGL
Trigger: CAGACCCTCCAAACATGTCAGAAGAATTAATCCAGTTGAAAGCAAAAGAGCGACACTTTTTAGAGCAATTGTTAGATGGGAAGAAGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp TGTGTCAATAATTTCAGCAGCACATCCACTGTCTTATaGACTCCTGTTTCGTTCATGTGCTTTAAAACCACA +
Preference number: 6 (lower is better)
Translates to: CVNNFSSTSTVL*TPVSFMCFKTT
Trigger: TGTGGTTTTAAAGCACATGAACGAAACAGGAGTTCATAAGACAGTGGATGTGCTGCTGAAATTATTGACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp AGATCATGTTCTACTATATCAAGCATGCTTTTAAGCTaGCAGAAGATCAGTATTCTGTGCTGTGCCACAACA +
Preference number: 6 (lower is better)
Translates to: RSCSTISSMLLS*QKISILCCATT
Trigger: TGTTGTGGCACAGCACAGAATACTGATCTTCTGTCAGCTTAAAAGCATGCTTGATATAGTAGAACATGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp ATATTAAGTCCAAGTTTCTTCTGTAATAATTTCCGTTaGCGTGCTATCCTCTCTTTAGGATCCACTTCACCT +
Preference number: 6 (lower is better)
Translates to: ILSPSFFCNNFR*RAILSLGSTSP
Trigger: AGGTGAAGTGGATCCTAAAGAGAGGATAGCACGCCAACGGAAATTATTACAGAAGAAACTTGGACTTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CCA 72 bp AATTGCTCTAAAAAGTGTCGCTCTTTTGCTTTCAACTaGATTAATTCTTCTGACATGTTTGGAGGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: NCSKKCRSFAFN*INSSDMFGGSG
Trigger: TCCAGACCCTCCAAACATGTCAGAAGAATTAATCCAGTTGAAAGCAAAAGAGCGACACTTTTTAGAGCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS TCA 72 bp CAGAGCTTACGTAAATATTGTAACGCCTGGAATACATaGCCTGTCGCTTTAAGTTTTGGTTTTTCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: QSLRKYCNAWNT*PVALSFGFSVS
Trigger: AGAAACTGAAAAACCAAAACTTAAAGCGACAGGTCATGTATTCCAGGCGTTACAATATTTACGTAAGCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp CTCTGTTTTGCAAATAACTTGGCCATTCTTTTAGCTTaGTTCTTCTGTCTATTACTCATTCCTGCTCGGAAT +
Preference number: 6 (lower is better)
Translates to: LCFANNLAILLA*FFCLLLIPARN
Trigger: ATTCCGAGCAGGAATGAGTAATAGACAGAAGAACAAAGCTAAAAGAATGGCCAAGTTATTTGCAAAACAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 90 bp AAGCTAGAGTTTTCTTGGCTAATAACAGTATTTGCGATGTTCATCTaGAATTTCTGCAAGCCCATTATCTTTTCTTCTAGTGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: KLEFSWLITVFAMFI*NFCKPIIFSSSVPL
Trigger: CAGAGGAACACTAGAAGAAAAGATAATGGGCTTGCAGAAATTCAAGATGAACATCGCAAATACTGTTATTAGCCAAGAAAACTCTAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4
CDS CAA 72 bp TCCCATCTAACAATTGCTCTAAAAAGTGTCGCTCTTTaGCTTTCAACTGGATTAATTCTTCTGACATGTTTG +
Preference number: 6 (lower is better)
Translates to: SHLTIALKSVAL*LSTGLILLTCL
Trigger: CAAACATGTCAGAAGAATTAATCCAGTTGAAAGCAAAAGAGCGACACTTTTTAGAGCAATTGTTAGATGGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099494.4