Pregenerated sensors for BST1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029082Ensembl transcript IDs: ENSMUST00000101237.8, ENSMUST00000126976.6
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGGCATTTTCCTGTCGACACCAGCTCAAGAAATCGCCAACTTTaGCATACAGCACGTCGCACAGGGCCACGAGGCGGCGGGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: QRHFPVDTSSRNRQL*HTARRTGPRGGGCS Trigger: AGAACACCCGCCGCCTCGTGGCCCTGTGCGACGTGCTGTATGGCAAAGTTGGCGATTTCTTGAGCTGGTGTCGACAGGAAAATGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| 3UTR CCA 90 bp | GCACCTACCTCCCAAGCGCTGGGATCAAAGGCCTGTGATAAGGCATaGAAGGCTGAGGAAGCCATAAATTGCCTATCAGGGAACTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: APTSQALGSKACDKA*KAEEAINCLSGNSH Trigger: ATGAGAGTTCCCTGATAGGCAATTTATGGCTTCCTCAGCCTTCCATGCCTTATCACAGGCCTTTGATCCCAGCGCTTGGGAGGTAGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CCA 90 bp | AGCTTTGAACTAACAGAGATTCTCCTGCACCTACCTCCCAAGCGCTaGGATCAAAGGCCTGTGATAAGGCATGGAAGGCTGAGGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: SFELTEILLHLPPKR*DQRPVIRHGRLRKP Trigger: TGGCTTCCTCAGCCTTCCATGCCTTATCACAGGCCTTTGATCCCAGCGCTTGGGAGGTAGGTGCAGGAGAATCTCTGTTAGTTCAAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CCA 90 bp | GTCCTTTTCAGAACTCTGTATTTTTATCTGCAGTGTGTAGCCATTTaGTCAGGCTTCTTTCCCATAGCACAATGCACTGGAATTGCCATT | + |
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Preference number: 1 (lower is better) Translates to: VLFRTLYFYLQCVAI*SGFFPIAQCTGIAI Trigger: AATGGCAATTCCAGTGCATTGTGCTATGGGAAAGAAGCCTGACCAAATGGCTACACACTGCAGATAAAAATACAGAGTTCTGAAAAGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CCA 90 bp | CCTTGTTTCTTGAATCATGAGTGTAAATACAACTGGATTACCGTCTaGTTACATTGTTTTTCTAGAAGGGTTTGTCTTGAGACAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: PCFLNHECKYNWITV*LHCFSRRVCLETVG Trigger: ACCCACTGTCTCAAGACAAACCCTTCTAGAAAAACAATGTAACCAGACGGTAATCCAGTTGTATTTACACTCATGATTCAAGAAACAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CAA 90 bp | CCAGAGGCATTTTCCTGTCGACACCAGCTCAAGAAATCGCCAACTTaGCCATACAGCACGTCGCACAGGGCCACGAGGCGGCGGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PEAFSCRHQLKKSPT*PYSTSHRATRRRVF Trigger: GAACACCCGCCGCCTCGTGGCCCTGTGCGACGTGCTGTATGGCAAAGTTGGCGATTTCTTGAGCTGGTGTCGACAGGAAAATGCCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| 3UTR CAA 90 bp | CAGTGGGTTTCCTTAGTTTACACAGGACAGTGGACTACTCAAGGGTaGCTGCAAGGCTGGCTTCTGTTAGAACCCTGTGGGGATTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: QWVSLVYTGQWTTQG*LQGWLLLEPCGDFL Trigger: TAGAAAATCCCCACAGGGTTCTAACAGAAGCCAGCCTTGCAGCAACCCTTGAGTAGTCCACTGTCCTGTGTAAACTAAGGAAACCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAACTATGTCAACCATATTAGCTTTGAACTAACAGAGATTCTCCTGCACCTAGTTCCTGCTGATGGCTaGGCAGTAGTGCCCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: TNYVNHISFELTEILLHLVPADG*AVVPST Trigger: TGTACTGGGCACTACTGCTCAGCCATCAGCAGGAAC...TAGGTGCAGGAGAATCTCTGTTAGTTCAAAGCTAATATGGTTGACATAGTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCAAAGGGGTGCTTGTGTGTGCTTaGCATTTTGGGTTATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NFTLIESHGANLCVDSKGVLVCA*HFGLFP Trigger: AGGAAATAACCCAAAATGTCAAGCACACACAAGCAC...CCCTTTGGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAATAAGCCAAAGATCAAAAACAGAATAGCTGTGAAGTCCCTATTCAGAGAGGGGTTGCTGCAAGGCTaGCTTCTGTTAGAACCCTGT | + |
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Preference number: 2 (lower is better) Translates to: INKPKIKNRIAVKSLFREGLLQG*LLLEPC Trigger: ACAGGGTTCTAACAGAAGCCAGCCTTGCAGCAACCC...CTCTCTGAATAGGGACTTCACAGCTATTCTGTTTTTGATCTTTGGCTTATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR TCA 90 bp | AGTATAAACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCGAGTTAGGTAAAGAGTaGAGAGAAATCAGGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: SINFTLIESHGANLCVDSELGKE*REIRNQ Trigger: TTGATTCCTGATTTCTCTTCACTCTTTACCTAACTC...GGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTTTATACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR GCA 90 bp | AGTATAAACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCTTCTCCAGGTCTCAGTaGTTTGTACCATTATCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SINFTLIESHGANLCVDSFSRSQ*FVPLSN Trigger: ATTTGATAATGGTACAAAGCACTGAGACCTGGAGAA...GGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTTTATACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAACTATGTCAACCATATTAGCTTTGAACTAACAGAGATTCTCCTGCACCTAGTGTGTGCTTGTGTGTaGTTGACATTTTGGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: TNYVNHISFELTEILLHLVCACV*LTFWVI Trigger: AATAACCCAAAATGTCAAGCACACACAAGCACACAC...TAGGTGCAGGAGAATCTCTGTTAGTTCAAAGCTAATATGGTTGACATAGTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR CCA 90 bp | AGTATAAACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCAACTGGATTACCGTCTaGTTACATTGTTTTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SINFTLIESHGANLCVDSNWITV*LHCFSR Trigger: TCTAGAAAAACAATGTAACCAGACGGTAATCCAGTT...GGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTTTATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR GCA 72 bp | TTTCCTGTCGACACCAGCTCAAGAAATCGCCAACTTTaGCATACAGCACGTCGCACAGGGCCACGAGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: FPVDTSSRNRQL*HTARRTGPRGG Trigger: GCCGCCTCGTGGCCCTGTGCGACGTGCTGTATGGCAAAGTTGGCGATTTCTTGAGCTGGTGTCGACAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| 3UTR TCA 72 bp | CCAATAGGAGTCCACGGCGTTGTTTTCACAGTCTTCTaGTGTGGGGCAGGACTGGTAGTCAAGTCCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PIGVHGVVFTVF*CGAGLVVKSRG Trigger: GCCTCTGGACTTGACTACCAGTCCTGCCCCACATCAGAAGACTGTGAAAACAACGCCGTGGACTCCTATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| 3UTR CCA 72 bp | CTAACAGAGATTCTCCTGCACCTACCTCCCAAGCGCTaGGATCAAAGGCCTGTGATAAGGCATGGAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LTEILLHLPPKR*DQRPVIRHGRL Trigger: CAGCCTTCCATGCCTTATCACAGGCCTTTGATCCCAGCGCTTGGGAGGTAGGTGCAGGAGAATCTCTGTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CCA 72 bp | TCCCAAGCGCTGGGATCAAAGGCCTGTGATAAGGCATaGAAGGCTGAGGAAGCCATAAATTGCCTATCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SQALGSKACDKA*KAEEAINCLSG Trigger: CCCTGATAGGCAATTTATGGCTTCCTCAGCCTTCCATGCCTTATCACAGGCCTTTGATCCCAGCGCTTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CCA 72 bp | AGGAGTCCACGGCGTTGTTTTCACAGTCTTCTGATGTaGGGCAGGACTGGTAGTCAAGTCCAGAGGCATTTT | + |
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Preference number: 3 (lower is better) Translates to: RSPRRCFHSLLM*GRTGSQVQRHF Trigger: AAAATGCCTCTGGACTTGACTACCAGTCCTGCCCCACATCAGAAGACTGTGAAAACAACGCCGTGGACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| 3UTR-3UTR CAA 90 bp | GCTGTGAAGTCCCTATTCAGAGAGAACTGCACTCTCCTTGGGGTTATTTTCTTTCTAGAAGGGTTTGTCTaGAGACAGTGGGTTTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: AVKSLFRENCTLLGVIFFLEGFV*RQWVSL Trigger: TAAGGAAACCCACTGTCTCAAGACAAACCCTTCTAG...AAAGAAAATAACCCCAAGGAGAGTGCAGTTCTCTCTGAATAGGGACTTCACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR GCA 72 bp | GTAGTGCCCAGTACAGAATGCACTACAGTTACAGAATaGACTACATTTGACTTAACTGTTCACCAGTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: VVPSTECTTVTE*TTFDLTVHQSG Trigger: ACCTGACTGGTGAACAGTTAAGTCAAATGTAGTGCATTCTGTAACTGTAGTGCATTCTGTACTGGGCACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR GCA 72 bp | GTAGCCATTTGGTCAGGCTTCTTTCCCATAGCACAATaGACTGGAATTGCCATTCATATGACTATACATCAA | + |
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Preference number: 3 (lower is better) Translates to: VAIWSGFFPIAQ*TGIAIHMTIHQ Trigger: TTGATGTATAGTCATATGAATGGCAATTCCAGTGCATTGTGCTATGGGAAAGAAGCCTGACCAAATGGCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTGAAGTCCCTATTCAGAGAGAACTGCACTCTCCTTGGGGTTATTTTCTTTACAGCTTTGAGAGTTTaGAGAAGTTTATGTGAGATG | + |
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Preference number: 3 (lower is better) Translates to: AVKSLFRENCTLLGVIFFTALRV*RSLCEM Trigger: CATCTCACATAAACTTCTCAAAACTCTCAAAGCTGT...AAAGAAAATAACCCCAAGGAGAGTGCAGTTCTCTCTGAATAGGGACTTCACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR TCA 72 bp | CACAGTAGCAACTTCTGTCTGCTAAGCAGGACTAGATaGATGCCTTGTTTCTTGAATCATGAGTGTAAATAC | + |
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Preference number: 3 (lower is better) Translates to: HSSNFCLLSRTR*MPCFLNHECKY Trigger: GTATTTACACTCATGATTCAAGAAACAAGGCATTCATCTAGTCCTGCTTAGCAGACAGAAGTTGCTACTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAATAAGCCAAAGATCAAAAACAGAATAGCTGTGAAGTCCCTATTCAGAGAGTCTTTCTCCATAGCTTaGTCCTTTTCAGAACTCTGT | + |
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Preference number: 3 (lower is better) Translates to: INKPKIKNRIAVKSLFRESFSIA*SFSELC Trigger: ACAGAGTTCTGAAAAGGACAAAGCTATGGAGAAAGA...CTCTCTGAATAGGGACTTCACAGCTATTCTGTTTTTGATCTTTGGCTTATTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CCA 72 bp | ATGCCTTGTTTCTTGAATCATGAGTGTAAATACAACTaGATTACCGTCTGGTTACATTGTTTTTCTAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: MPCFLNHECKYN*ITVWLHCFSRR Trigger: CCTTCTAGAAAAACAATGTAACCAGACGGTAATCCAGTTGTATTTACACTCATGATTCAAGAAACAAGGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CCA 72 bp | CATGACATTTACTTAACAAATGAACGTTCCATCCTATaGGTATACAAAACCTTATGTAGCAGTTCCAAACCT | + |
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Preference number: 3 (lower is better) Translates to: HDIYLTNERSIL*VYKTLCSSSKP Trigger: AGGTTTGGAACTGCTACATAAGGTTTTGTATACCCATAGGATGGAACGTTCATTTGTTAAGTAAATGTCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | AGCTCAAGAAATCGCCAACTTTGCCATACAGCACGTCGCACAGGGCCACGAGGCAAGATGCTCTGGAGGTaGGGAGTGGTACCCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SSRNRQLCHTARRTGPRGKMLWR*GVVPSP Trigger: AGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTT...GCCTCGTGGCCCTGTGCGACGTGCTGTATGGCAAAGTTGGCGATTTCTTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS-3UTR GCA 90 bp | GACACCAGCTCAAGAAATCGCCAACTTTGCCATACAGCACGTCGCACAGGGCCACAGCGTGGTGTACTCTaGGCAGCGGCCCAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: DTSSRNRQLCHTARRTGPQRGVL*AAAQED Trigger: ATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTG...TGGCCCTGTGCGACGTGCTGTATGGCAAAGTTGGCGATTTCTTGAGCTGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| 3UTR CAA 72 bp | TTTTCCTGTCGACACCAGCTCAAGAAATCGCCAACTTaGCCATACAGCACGTCGCACAGGGCCACGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FSCRHQLKKSPT*PYSTSHRATRR Trigger: CCGCCTCGTGGCCCTGTGCGACGTGCTGTATGGCAAAGTTGGCGATTTCTTGAGCTGGTGTCGACAGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS-3UTR TCA 90 bp | TTTCACAGTCTTCTGATGTGGGGCAGGACTGGTAGTCAAGTCCAGAGGCATTTTATTCTCCCAGAACAGTaGCCCAGGCTCAGCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: FHSLLMWGRTGSQVQRHFILPEQ*PRLSSV Trigger: CACGCTGCTGAGCCTGGGTCACTGTTCTGGGAGAAT...AAAATGCCTCTGGACTTGACTACCAGTCCTGCCCCACATCAGAAGACTGTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS-3UTR GCA 90 bp | TTCAGCATGACGTTGATCACCCCTGAACTGTCTCTTGAATACTGCATGGATGCAAGCGGCCCAGGAAGATaGTCTGGAGGTGAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSMTLITPELSLEYCMDASGPGR*SGGEEW Trigger: CCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCT...TGCATCCATGCAGTATTCAAGAGACAGTTCAGGGGTGATCAACGTCATGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS-3UTR TCA 90 bp | CATTTGGTCAGGCTTCTTTCCCATAGCACAATGCACTGGAATTGCCATTCATATTGTCCAGCACCCCCTTaGAGGCCTCCCAGATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLVRLLSHSTMHWNCHSYCPAPP*RPPRWL Trigger: CAGCCATCTGGGAGGCCTTCAAGGGGGTGCTGGACA...ATATGAATGGCAATTCCAGTGCATTGTGCTATGGGAAAGAAGCCTGACCAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | TTACACAGGACAGTGGACTACTCAAGGGTTGCTGCAAGGCTGGCTTCTGTTAGACTGGTCGGTAGTCATTaGTACAGCTGTGCTGGAACC | + |
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Preference number: 4 (lower is better) Translates to: LHRTVDYSRVAARLASVRLVGSH*YSCAGT Trigger: GGTTCCAGCACAGCTGTATCAATGACTACCGACCAG...TCTAACAGAAGCCAGCCTTGCAGCAACCCTTGAGTAGTCCACTGTCCTGTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CAA 72 bp | TCCTTAGTTTACACAGGACAGTGGACTACTCAAGGGTaGCTGCAAGGCTGGCTTCTGTTAGAACCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLVYTGQWTTQG*LQGWLLLEPCG Trigger: CCCACAGGGTTCTAACAGAAGCCAGCCTTGCAGCAACCCTTGAGTAGTCCACTGTCCTGTGTAAACTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | TGGGTTTCCTTAGTTTACACAGGACAGTGGACTACTCAAGGGTTGCTGCAAGGCATTCTCCCAGAACAGTaGCTTGTCCCTAGGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: WVSLVYTGQWTTQGLLQGILPEQ*LVPRNG Trigger: CCCATTCCTAGGGACAAGTCACTGTTCTGGGAGAAT...GCCTTGCAGCAACCCTTGAGTAGTCCACTGTCCTGTGTAAACTAAGGAAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR GCA 90 bp | AACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCAAAGGGCAGCGTGGTGTACTCTaGGCAGCGGCCCAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: NFTLIESHGANLCVDSKGQRGVL*AAAQED Trigger: ATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTG...CCCTTTGGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR GCA 90 bp | TTACACAGGACAGTGGACTACTCAAGGGTTGCTGCAAGGCTGGCTTCTGTTAGATCCCTAGGAATGGGGTaGCTGGAGAGGTTAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: LHRTVDYSRVAARLASVRSLGMG*LERLMK Trigger: CTTCATTAACCTCTCCAGGCACCCCATTCCTAGGGA...TCTAACAGAAGCCAGCCTTGCAGCAACCCTTGAGTAGTCCACTGTCCTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR GCA 90 bp | TTACACAGGACAGTGGACTACTCAAGGGTTGCTGCAAGGCTGGCTTCTGTTAGATACAGTCGGGGTGAGTaGTGTGGTCCACACACATTA | + |
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Preference number: 4 (lower is better) Translates to: LHRTVDYSRVAARLASVRYSRGE*CGPHTL Trigger: TAATGTGTGTGGACCACAGCACTCACCCCGACTGTA...TCTAACAGAAGCCAGCCTTGCAGCAACCCTTGAGTAGTCCACTGTCCTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | AACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCAAAGGGAAGATGCTCTGGAGGTaGGGAGTGGTACCCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: NFTLIESHGANLCVDSKGKMLWR*GVVPSP Trigger: AGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTT...CCCTTTGGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | GCTGTGAAGTCCCTATTCAGAGAGAACTGCACTCTCCTTGGGGTTATTTTCTTTGAAGAGATCATAGTCTaGGGGGAGCACAGAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AVKSLFRENCTLLGVIFFEEIIV*GEHRAG Trigger: CCCTGCTCTGTGCTCCCCTCAGACTATGATCTCTTC...AAAGAAAATAACCCCAAGGAGAGTGCAGTTCTCTCTGAATAGGGACTTCACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR GCA 90 bp | GCTGTGAAGTCCCTATTCAGAGAGAACTGCACTCTCCTTGGGGTTATTTTCTTTGCTGGCGTCTCCTATTaGATGAAGAGATGCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: AVKSLFRENCTLLGVIFFAGVSY*MKRCAL Trigger: GAGAGCGCATCTCTTCATGCAATAGGAGACGCCAGC...AAAGAAAATAACCCCAAGGAGAGTGCAGTTCTCTCTGAATAGGGACTTCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR GCA 90 bp | ACATTTGACTTAACTGTTCACCAGTCAGGTGACACACATGACATTTACTTAACAAGCGGCCCAGGAAGATaGTCTGGAGGTGAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TFDLTVHQSGDTHDIYLTSGPGR*SGGEEW Trigger: CCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCT...TGTTAAGTAAATGTCATGTGTGTCACCTGACTGGTGAACAGTTAAGTCAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | CCCAGTACAGAATGCACTACAGTTACAGAATGCACTACATTTGACTTAACTGTTATGATACAGTCGGGGTaGGTGCTGTGGTCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: PSTECTTVTECTTFDLTVMIQSG*VLWSTH Trigger: GTGTGTGGACCACAGCACTCACCCCGACTGTATCAT...AACAGTTAAGTCAAATGTAGTGCATTCTGTAACTGTAGTGCATTCTGTACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR GCA 90 bp | CCCAGTACAGAATGCACTACAGTTACAGAATGCACTACATTTGACTTAACTGTTCCTCCCAGATGGCTGTaGAGTTTTTGTTCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSTECTTVTECTTFDLTVPPRWL*SFCSPG Trigger: GCCTGGGGAACAAAAACTGCACAGCCATCTGGGAGG...AACAGTTAAGTCAAATGTAGTGCATTCTGTAACTGTAGTGCATTCTGTACTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | CATAAATTGCCTATCAGGGAACTCTCATGCCTGCTGTCTATAGGTAGAGAACAACTACTAAGAGAGAAATaGGAAGGCTGGCGTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: HKLPIRELSCLLSIGREQLLREK*EGWRLL Trigger: TAGGAGACGCCAGCCTTCTCATTTCTCTCTTAGTAG...TTGTTCTCTACCTATAGACAGCAGGCATGAGAGTTCCCTGATAGGCAATTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CCA 90 bp | AGTATAAACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCGGGATAGGCTCCTTTTaGCTCCGAGCCATTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SINFTLIESHGANLCVDSGIGSF*LRAIQH Trigger: ATGCTGAATGGCTCGGAGCCAAAAGGAGCCTATCCC...GGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTTTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | AGTATAAACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCGTTTTCACAGTCTTCTaGTGTGGGGCAGGACTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SINFTLIESHGANLCVDSVFTVF*CGAGLV Trigger: TACCAGTCCTGCCCCACATCAGAAGACTGTGAAAAC...GGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTTTATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR TCA 90 bp | ATTAATAAGCCAAAGATCAAAAACAGAATAGCTGTGAAGTCCCTATTCAGAGAGCTGAGGCTGAGTTCATaGTACAGTCGGGGTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: INKPKIKNRIAVKSLFRELRLSS*YSRGEC Trigger: GCACTCACCCCGACTGTATCATGAACTCAGCCTCAG...CTCTCTGAATAGGGACTTCACAGCTATTCTGTTTTTGATCTTTGGCTTATTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR GCA 90 bp | ATTAATAAGCCAAAGATCAAAAACAGAATAGCTGTGAAGTCCCTATTCAGAGAGTCATTGATACAGCTGTaGTGGAACCCCAGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: INKPKIKNRIAVKSLFRESLIQL*WNPRAS Trigger: GGAGGCCCTGGGGTTCCAGCACAGCTGTATCAATGA...CTCTCTGAATAGGGACTTCACAGCTATTCTGTTTTTGATCTTTGGCTTATTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTACAGAATGCACTACAGTTACAGAATGCACTACATTTGACTTAACTGTTCACAGTCTTCTGATGTaGGGCAGGACTGGTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PSTECTTVTECTTFDLTVHSLLM*GRTGSQ Trigger: TTGACTACCAGTCCTGCCCCACATCAGAAGACTGTG...AACAGTTAAGTCAAATGTAGTGCATTCTGTAACTGTAGTGCATTCTGTACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CCA 90 bp | ACATTTGACTTAACTGTTCACCAGTCAGGTGACACACATGACATTTACTTAACATTGATACAGCTGTGCTaGAACCCCAGGGCCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFDLTVHQSGDTHDIYLTLIQLC*NPRASN Trigger: ATTGGAGGCCCTGGGGTTCCAGCACAGCTGTATCAA...TGTTAAGTAAATGTCATGTGTGTCACCTGACTGGTGAACAGTTAAGTCAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| 3UTR CAA 72 bp | TCCTGGAATCCACCGCATTCCTCTTTCTCCATAGCTTaGTCCTTTTCAGAACTCTGTATTTTTATCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SWNPPHSSFSIA*SFSELCIFICS Trigger: ACTGCAGATAAAAATACAGAGTTCTGAAAAGGACAAAGCTATGGAGAAAGAGGAATGCGGTGGATTCCAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CCA 90 bp | ACTAACTATGTCAACCATATTAGCTTTGAACTAACAGAGATTCTCCTGCACCTACTCTTGAATACTGCATaGATGCACTTTTCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNYVNHISFELTEILLHLLLNTA*MHFSNR Trigger: CCTATTGGAAAAGTGCATCCATGCAGTATTCAAGAG...TAGGTGCAGGAGAATCTCTGTTAGTTCAAAGCTAATATGGTTGACATAGTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS GCA 90 bp | CCAGGCTCAGCAGCGTGGTGTACTCTGCGCAGCGGCCCAGGAAGATaGTCTGGAGGTGAGGAGTGGTACCCTCCCCTGTCCACCGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGSAAWCTLRSGPGR*SGGEEWYPPLSTAL Trigger: GAGCGCGGTGGACAGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101237.8 ENSMUST00000126976.6 |
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| CDS TCA 90 bp | AGCGTGGTGTACTCTGCGCAGCGGCCCAGGAAGATGCTCTGGAGGTaGGGAGTGGTACCCTCCCCTGTCCACCGCGCTCTTGCCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVVYSAQRPRKMLWR*GVVPSPVHRALAPR Trigger: TCTGGGGGCAAGAGCGCGGTGGACAGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101237.8 ENSMUST00000126976.6 |
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| CDS CCA 90 bp | TGTACTCTGCGCAGCGGCCCAGGAAGATGCTCTGGAGGTGAGGAGTaGTACCCTCCCCTGTCCACCGCGCTCTTGCCCCCAGAAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CTLRSGPGRCSGGEE*YPPLSTALLPPEAL Trigger: CAGTGCTTCTGGGGGCAAGAGCGCGGTGGACAGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101237.8 ENSMUST00000126976.6 |
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| CDS GCA 90 bp | GGCTGTGCAGTTTTTGTTCCCCAGGCTCAGCAGCGTGGTGTACTCTaGGCAGCGGCCCAGGAAGATGCTCTGGAGGTGAGGAGTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: GCAVFVPQAQQRGVL*AAAQEDALEVRSGT Trigger: GGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGGGGAACAAAAACTGCACAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CAA 90 bp | TCATGCCTCTGGCACCCCGCCCACCCATCCTGGAATCCACCGCATTCCTCTTTCACAGAGCAGGGGTCCTaGTCCAGCACCCCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCLWHPAHPSWNPPHSSFTEQGS*SSTPLK Trigger: CTTCAAGGGGGTGCTGGACAAGGACCCCTGCTCTGT...GAAAGAGGAATGCGGTGGATTCCAGGATGGGTGGGCGGGGTGCCAGAGGCATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS GCA 90 bp | TATTCTCCCAGAACAGTGACCCAGGCTCAGCAGCGTGGTGTACTCTaGGCAGCGGCCCAGGAAGATGCTCTGGAGGTGAGGAGTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: YSPRTVTQAQQRGVL*AAAQEDALEVRSGT Trigger: GGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGGGTCACTGTTCTGGGAGAATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS CCA 90 bp | AGCAGGTGGTTATTCTCCCAGAACAGTGACCCAGGCTCAGCAGCGTaGTGTACTCTGCGCAGCGGCCCAGGAAGATGCTCTGGAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRWLFSQNSDPGSAA*CTLRSGPGRCSGGE Trigger: CTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGGGTCACTGTTCTGGGAGAATAACCACCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS-3UTR CAA 90 bp | TCATGCCTCTGGCACCCCGCCCACCCATCCTGGAATCCACCGCATTCCTCTTTCGGCTGGCGTCTCCTATaGCATGAAGAGATGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCLWHPAHPSWNPPHSSFGWRLL*HEEMRS Trigger: AGAGCGCATCTCTTCATGCAATAGGAGACGCCAGCC...GAAAGAGGAATGCGGTGGATTCCAGGATGGGTGGGCGGGGTGCCAGAGGCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTTCCTTAGTTTACACAGGACAGTGGACTACTCAAGGGTTGCTGCAAGGCCTGTCCACCGCGCTCTaGCCCCCAGAAGCACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WVSLVYTGQWTTQGLLQGLSTAL*PPEALS Trigger: TGACAGTGCTTCTGGGGGCAAGAGCGCGGTGGACAG...GCCTTGCAGCAACCCTTGAGTAGTCCACTGTCCTGTGTAAACTAAGGAAACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CAA 90 bp | GGCATTTTCCTGTCGACACCAGCTCAAGAAATCGCCAACTTTGCCATACAGCACCTGTCCACCGCGCTCTaGCCCCCAGAAGCACTGTCA | + |
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Preference number: 5 (lower is better) Translates to: GIFLSTPAQEIANFAIQHLSTAL*PPEALS Trigger: TGACAGTGCTTCTGGGGGCAAGAGCGCGGTGGACAG...GTGCTGTATGGCAAAGTTGGCGATTTCTTGAGCTGGTGTCGACAGGAAAATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS-3UTR CAA 90 bp | GCTGTGAAGTCCCTATTCAGAGAGAACTGCACTCTCCTTGGGGTTATTTTCTTTTCCCAGAACAGTGACTaGTCCCTAGGAATGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVKSLFRENCTLLGVIFFSQNSD*SLGMGC Trigger: GCACCCCATTCCTAGGGACAAGTCACTGTTCTGGGA...AAAGAAAATAACCCCAAGGAGAGTGCAGTTCTCTCTGAATAGGGACTTCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CAA 90 bp | ATTAATAAGCCAAAGATCAAAAACAGAATAGCTGTGAAGTCCCTATTCAGAGAGTTGTCCAGCACCCCCTaGAAGGCCTCCCAGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: INKPKIKNRIAVKSLFRELSSTP*KASQMA Trigger: AGCCATCTGGGAGGCCTTCAAGGGGGTGCTGGACAA...CTCTCTGAATAGGGACTTCACAGCTATTCTGTTTTTGATCTTTGGCTTATTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CAA 90 bp | AGTATAAACTTTACCCTGATTGAGTCTCATGGAGCAAATTTGTGTGTGGATTCCTGGGATAGGCTCCTTTaGGCTCCGAGCCATTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SINFTLIESHGANLCVDSWDRLL*APSHSA Trigger: TGCTGAATGGCTCGGAGCCAAAAGGAGCCTATCCCA...GGAATCCACACACAAATTTGCTCCATGAGACTCAATCAGGGTAAAGTTTATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CAA 90 bp | ACATTTGACTTAACTGTTCACCAGTCAGGTGACACACATGACATTTACTTAACACCACAGGATTCCACATaGGGCCCTCCAACGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TFDLTVHQSGDTHDIYLTPQDST*GPPTSC Trigger: GCATGACGTTGGAGGGCCCAATGTGGAATCCTGTGG...TGTTAAGTAAATGTCATGTGTGTCACCTGACTGGTGAACAGTTAAGTCAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS-3UTR CAA 90 bp | ACATTTGACTTAACTGTTCACCAGTCAGGTGACACACATGACATTTACTTAACACCATTCAGCATGACGTaGATCACCCCTGAACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFDLTVHQSGDTHDIYLTPFSMT*ITPELS Trigger: AGACAGTTCAGGGGTGATCAACGTCATGCTGAATGG...TGTTAAGTAAATGTCATGTGTGTCACCTGACTGGTGAACAGTTAAGTCAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS CCA 72 bp | CGCAGCGGCCCAGGAAGATGCTCTGGAGGTGAGGAGTaGTACCCTCCCCTGTCCACCGCGCTCTTGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RSGPGRCSGGEE*YPPLSTALLPP Trigger: TGGGGGCAAGAGCGCGGTGGACAGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101237.8 ENSMUST00000126976.6 |
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| CDS GCA 72 bp | GCAGCGTGGTGTACTCTGCGCAGCGGCCCAGGAAGATaGTCTGGAGGTGAGGAGTGGTACCCTCCCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AAWCTLRSGPGR*SGGEEWYPPLS Trigger: GGACAGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101237.8 ENSMUST00000126976.6 |
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| CDS TCA 72 bp | TACTCTGCGCAGCGGCCCAGGAAGATGCTCTGGAGGTaGGGAGTGGTACCCTCCCCTGTCCACCGCGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: YSAQRPRKMLWR*GVVPSPVHRAL Trigger: AAGAGCGCGGTGGACAGGGGAGGGTACCACTCCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101237.8 ENSMUST00000126976.6 |
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| CDS GCA 72 bp | AGAACAGTGACCCAGGCTCAGCAGCGTGGTGTACTCTaGGCAGCGGCCCAGGAAGATGCTCTGGAGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RTVTQAQQRGVL*AAAQEDALEVR Trigger: CCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGGGTCACTGTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS CAA 72 bp | GGTGAGGAGTGGTACCCTCCCCTGTCCACCGCGCTCTaGCCCCCAGAAGCACTGTCAGCAAGGACAGCCATA | + |
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Preference number: 6 (lower is better) Translates to: GEEWYPPLSTAL*PPEALSARTAI Trigger: TATGGCTGTCCTTGCTGACAGTGCTTCTGGGGGCAAGAGCGCGGTGGACAGGGGAGGGTACCACTCCTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101237.8 ENSMUST00000126976.6 |
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| CDS GCA 72 bp | GTTTTTGTTCCCCAGGCTCAGCAGCGTGGTGTACTCTaGGCAGCGGCCCAGGAAGATGCTCTGGAGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VFVPQAQQRGVL*AAAQEDALEVR Trigger: CCTCACCTCCAGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGGGGAACAAAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS CCA 72 bp | TGGCTGTGCAGTTTTTGTTCCCCAGGCTCAGCAGCGTaGTGTACTCTGCGCAGCGGCCCAGGAAGATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WLCSFCSPGSAA*CTLRSGPGRCS Trigger: AGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGGGGAACAAAAACTGCACAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS CCA 72 bp | TTATTCTCCCAGAACAGTGACCCAGGCTCAGCAGCGTaGTGTACTCTGCGCAGCGGCCCAGGAAGATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFSQNSDPGSAA*CTLRSGPGRCS Trigger: AGAGCATCTTCCTGGGCCGCTGCGCAGAGTACACCACGCTGCTGAGCCTGGGTCACTGTTCTGGGAGAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126976.6 |
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| CDS GCA 72 bp | CCAGGGCCTCCAATCTGTCTTCCAGGATTTTCACACTaGCTTCGCCACAGGATTCCACATTGGGCCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PGPPICLPGFSH*LRHRIPHWALQ Trigger: TTGGAGGGCCCAATGTGGAATCCTGTGGCGAAGGCAGTGTGAAAATCCTGGAAGACAGATTGGAGGCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS CAA 72 bp | ATAACGAGCAGGTGGTTATTCTCCCAGAACAGTGACTaGTCCCTAGGAATGGGGTGCCTGGAGAGGTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: ITSRWLFSQNSD*SLGMGCLERLM Trigger: CATTAACCTCTCCAGGCACCCCATTCCTAGGGACAAGTCACTGTTCTGGGAGAATAACCACCTGCTCGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS GCA 72 bp | TCGCCACAGGATTCCACATTGGGCCCTCCAACGTCATaGATAACCCAGATCTCTATTCTTGTGACTTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SPQDSTLGPPTS*ITQISILVTLS Trigger: GGATAAAGTCACAAGAATAGAGATCTGGGTTATGCATGACGTTGGAGGGCCCAATGTGGAATCCTGTGGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS TCA 72 bp | ATAGATGCTGAGGCTGAGTTCATGATACAGTCGGGGTaGGTGCTGTGGTCCACACACATTAAGAACTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: IDAEAEFMIQSG*VLWSTHIKNFT Trigger: AGTGAAGTTCTTAATGTGTGTGGACCACAGCACTCACCCCGACTGTATCATGAACTCAGCCTCAGCATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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| CDS TCA 72 bp | CCTGAGAACTTGAAGCCAAAGCTACTAAGAGAGAAATaGGAAGGCTGGCGTCTCCTATTGCATGAAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PENLKPKLLREK*EGWRLLLHEEM Trigger: CATCTCTTCATGCAATAGGAGACGCCAGCCTTCTCATTTCTCTCTTAGTAGCTTTGGCTTCAAGTTCTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101237.8 |
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