Pregenerated sensors for BSPRY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028392Ensembl transcript IDs: ENSMUST00000030088.12, ENSMUST00000107449.4, ENSMUST00000132237.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTaGAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGAGGCTACC | + |
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Preference number: 1 (lower is better) Translates to: LELSLRAWDRCQQVC*KQVSWRQRRREEAT Trigger: GGTAGCCTCCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR CCA 90 bp | AGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTaGAGACAGAGGAGGCGGGAGGAGGCTACCACACTCCCACGACGA | + |
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Preference number: 1 (lower is better) Translates to: RAWDRCQQVCCKQVS*RQRRREEATTLPRR Trigger: TCGTCGTGGGAGTGTGGTAGCCTCCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR GCA 90 bp | ATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTaGTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: MLELSLRAWDRCQQV*CKQVSWRQRRREEA Trigger: AGCCTCCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR TCA 90 bp | AGGCTAGAGAAGGCTCAGTCCAAGCTGCTCTGCAGCGAGGCACTTTaGGGGACTACAGTACTTCTCCAGTTACCTGCCTGCCCAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: RLEKAQSKLLCSEAL*GTTVLLQLPACPAI Trigger: AATGGCTGGGCAGGCAGGTAACTGGAGAAGTACTGTAGTCCCTCAAAGTGCCTCGCTGCAGAGCAGCTTGGACTGAGCCTTCTCTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR CCA 90 bp | ACAGAGGAGGCGGGAGGAGGCTACCACACTCCCACGACGACGTTCTaGCCAACAGTATCCTGGCAGGTTGTCCTTCGTATGCTAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: TEEAGGGYHTPTTTF*PTVSWQVVLRMLEK Trigger: TTTTTCTAGCATACGAAGGACAACCTGCCAGGATACTGTTGGCCAGAACGTCGTCGTGGGAGTGTGGTAGCCTCCTCCCGCCTCCTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR CCA 90 bp | CCACTGCTTTCTGGTTCTTCCCCTGCAGGACCTCGGCCATATACTTaGAGATGCCAGCACTCTGTAACTGCAGCCTCTCACACTGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: PLLSGSSPAGPRPYT*RCQHSVTAASHTGP Trigger: TGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGAACCAGAAAGCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR GCA 90 bp | TGCAGGACCTCGGCCATATACTTGGAGATGCCAGCACTCTGTAACTaGAGCCTCTCACACTGGTCCACAATCTTGTTCTTGAGCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: CRTSAIYLEMPALCN*SLSHWSTILFLSLA Trigger: AGCCAGGCTCAAGAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR GCA 90 bp | CTTTCTGGTTCTTCCCCTGCAGGACCTCGGCCATATACTTGGAGATaGCAGCACTCTGTAACTGCAGCCTCTCACACTGGTCCACAATCT | + |
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Preference number: 1 (lower is better) Translates to: LSGSSPAGPRPYTWR*QHSVTAASHTGPQS Trigger: AGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGAACCAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR TCA 90 bp | CCAGAGGCACAGGTTAATGAGACCCTTGGAAGGGCACAAGCATGGTaGGTTTGGGAGACTAAGGCCAACAGAAAAGAAACAGGATCCCCA | + |
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Preference number: 1 (lower is better) Translates to: PEAQVNETLGRAQAW*VWETKANRKETGSP Trigger: TGGGGATCCTGTTTCTTTTCTGTTGGCCTTAGTCTCCCAAACTCACCATGCTTGTGCCCTTCCAAGGGTCTCATTAACCTGTGCCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR TCA 90 bp | ACTAAGGCCAACAGAAAAGAAACAGGATCCCCACAGATGAAACATTaGAAGGTTATGTCTGAGTCTGAAGCTGCTATCCAGAAGTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: TKANRKETGSPQMKH*KVMSESEAAIQKLP Trigger: GGGCAACTTCTGGATAGCAGCTTCAGACTCAGACATAACCTTTCAATGTTTCATCTGTGGGGATCCTGTTTCTTTTCTGTTGGCCTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR TCA 90 bp | TTTGGGAGACTAAGGCCAACAGAAAAGAAACAGGATCCCCACAGATaGAACATTGAAAGGTTATGTCTGAGTCTGAAGCTGCTATCCAGA | + |
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Preference number: 1 (lower is better) Translates to: FGRLRPTEKKQDPHR*NIERLCLSLKLLSR Trigger: TCTGGATAGCAGCTTCAGACTCAGACATAACCTTTCAATGTTTCATCTGTGGGGATCCTGTTTCTTTTCTGTTGGCCTTAGTCTCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGGGCACAAGCATGGTaGGTTTGGGAGACTAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SLRAWDRCQQVCCKQVSWRAQAW*VWETKA Trigger: GGCCTTAGTCTCCCAAACTCACCATGCTTGTGCCCT...CCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGAAGGCTCAGTCCAAGCTGCTCTGCAGCGAGGCACTTTGAGGGACTACTGCAAGCAGGTTTCCTaGAGACAGAGGAGGCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AREGSVQAALQRGTLRDYCKQVS*RQRRRE Trigger: CTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCA...GTAGTCCCTCAAAGTGCCTCGCTGCAGAGCAGCTTGGACTGAGCCTTCTCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGAAGGCTCAGTCCAAGCTGCTCTGCAGCGAGGCACTTTGAGGGACTACCTCAGCCTCAGGGCCTaGGACAGATGCCAACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: AREGSVQAALQRGTLRDYLSLRA*DRCQQV Trigger: CACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAG...GTAGTCCCTCAAAGTGCCTCGCTGCAGAGCAGCTTGGACTGAGCCTTCTCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR CAA 90 bp | GAGGCTAGAGAAGGCTCAGTCCAAGCTGCTCTGCAGCGAGGCACTTaGAGGGACTACAGTACTTCTCCAGTTACCTGCCTGCCCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: EAREGSVQAALQRGT*RDYSTSPVTCLPSH Trigger: ATGGCTGGGCAGGCAGGTAACTGGAGAAGTACTGTAGTCCCTCAAAGTGCCTCGCTGCAGAGCAGCTTGGACTGAGCCTTCTCTAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR CAA 90 bp | CTCCAGTTACCTGCCTGCCCAGCCATTTGCCCCCACTGTACCTTGTaGTATACTAGCCATGCACAAGGTACCACACTGGATGCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LQLPACPAICPHCTL*YTSHAQGTTLDARG Trigger: GCCTCTGGCATCCAGTGTGGTACCTTGTGCATGGCTAGTATACAACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGCAGGTAACTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR CAA 90 bp | ACCACTGCTTTCTGGTTCTTCCCCTGCAGGACCTCGGCCATATACTaGGAGATGCCAGCACTCTGTAACTGCAGCCTCTCACACTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TTAFWFFPCRTSAIY*EMPALCNCSLSHWS Trigger: GGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGAACCAGAAAGCAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR-3UTR GCA 90 bp | GAGACCAAGAACTACTGGACTGAGAGGCTAGAGAAGGCTCAGTCCAAGCTGCTCGCCTGCCCAGCCATTTaGCCCCACTGTACCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: ETKNYWTERLEKAQSKLLACPAI*PHCTLL Trigger: CAACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGC...GAGCAGCTTGGACTGAGCCTTCTCTAGCCTCTCAGTCCAGTAGTTCTTGGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGTGGCCAACAGTATCCTaGCAGGTTGTCCTTCGTATG | + |
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Preference number: 2 (lower is better) Translates to: SLRAWDRCQQVCCKQVSWWPTVS*QVVLRM Trigger: CATACGAAGGACAACCTGCCAGGATACTGTTGGCCA...CCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR GCA 90 bp | GCTAGAGAAGGCTCAGTCCAAGCTGCTCTGCAGCGAGGCACTTTGAGGGACTACTGCCAACAAGTGTGCTaGAAGCAGGTTTCCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: AREGSVQAALQRGTLRDYCQQVC*KQVSWR Trigger: TCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCA...GTAGTCCCTCAAAGTGCCTCGCTGCAGAGCAGCTTGGACTGAGCCTTCTCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTAAGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCTCAGCCTCAGGGCCTaGGACAGATGCCAACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLRLALLCPQLFLLAALYLSLRA*DRCQQV Trigger: CACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAG...GTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCTTAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| 3UTR-3UTR CCA 90 bp | AGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCCTACGATCCAGAAGTTGCCCTaGGGAACACTCATGTCATTG | + |
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Preference number: 2 (lower is better) Translates to: RLALLCPQLFLLAALYPTIQKLP*GTLMSL Trigger: CAATGACATGAGTGTTCCCCAGGGCAACTTCTGGAT...CGTAGGGTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR CCA 90 bp | ATATACTTGGAGATGCCAGCACTCTGTAACTGCAGCCTCTCACACTGGTCCACAAATCTCTCTACAGGATaGAGGGATAGGAGGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: IYLEMPALCNCSLSHWSTNLSTG*RDRRRM Trigger: CATCCTCCTCCTATCCCTCCATCCTGTAGAGAGATT...TGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCCTCAGGATCCCCACAGATaGAACATTGAAAGGTTATGT | + |
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Preference number: 2 (lower is better) Translates to: LRLALLCPQLFLLAALYPQDPHR*NIERLC Trigger: ACATAACCTTTCAATGTTTCATCTGTGGGGATCCTG...AGGGTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR CAA 90 bp | CCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGCTGCTATCCAGAAGTaGCCCTGGGGAACACTCATG | + |
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Preference number: 3 (lower is better) Translates to: PGTDANKCAASRFPGDRGAAIQK*PWGTLM Trigger: CATGAGTGTTCCCCAGGGCAACTTCTGGATAGCAGC...TCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR TCA 72 bp | AAGGCTCAGTCCAAGCTGCTCTGCAGCGAGGCACTTTaGGGGACTACAGTACTTCTCCAGTTACCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: KAQSKLLCSEAL*GTTVLLQLPAC Trigger: GCAGGCAGGTAACTGGAGAAGTACTGTAGTCCCTCAAAGTGCCTCGCTGCAGAGCAGCTTGGACTGAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR GCA 72 bp | TCTTCCCCTGCAGGACCTCGGCCATATACTTGGAGATaGCAGCACTCTGTAACTGCAGCCTCTCACACTGGT | + |
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Preference number: 3 (lower is better) Translates to: SSPAGPRPYTWR*QHSVTAASHTG Trigger: ACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR CCA 72 bp | TCTGGTTCTTCCCCTGCAGGACCTCGGCCATATACTTaGAGATGCCAGCACTCTGTAACTGCAGCCTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SGSSPAGPRPYT*RCQHSVTAASH Trigger: GTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGAACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR GCA 72 bp | GGCACTTTGAGGGACTACAGTACTTCTCCAGTTACCTaGCTGCCCAGCCATTTGCCCCCACTGTACCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: GTLRDYSTSPVT*LPSHLPPLYLV Trigger: AACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGCAGGTAACTGGAGAAGTACTGTAGTCCCTCAAAGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR-3UTR CAA 90 bp | CCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAAGTGAGGGGGAATGTTaGTCACCCTTCTCACACGTA | + |
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Preference number: 3 (lower is better) Translates to: PGTDANKCAASRFPGDRGSEGEC*SPFSHV Trigger: TACGTGTGAGAAGGGTGACAAACATTCCCCCTCACT...TCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| 3UTR CCA 72 bp | GAGATGCCAGCACTCTGTAACTGCAGCCTCTCACACTaGTCCACAATCTTGTTCTTGAGCCTGGCTTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: EMPALCNCSLSH*STILFLSLASN Trigger: GTTAGAAGCCAGGCTCAAGAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR TCA 72 bp | ATGGTGTATGATGCAAGAGACCAAGAACTACTGGACTaGGAGGCTAGAGAAGGCTCAGTCCAAGCTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: MVYDARDQELLD*EAREGSVQAAL Trigger: CAGAGCAGCTTGGACTGAGCCTTCTCTAGCCTCTCAGTCCAGTAGTTCTTGGTCTCTTGCATCATACACCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR GCA 72 bp | TCGGCCATATACTTGGAGATGCCAGCACTCTGTAACTaGAGCCTCTCACACTGGTCCACAATCTTGTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: SAIYLEMPALCN*SLSHWSTILFL Trigger: CAAGAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| 3UTR CCA 72 bp | TTCACATGGTGTATGATGCAAGAGACCAAGAACTACTaGACTGAGAGGCTAGAGAAGGCTCAGTCCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FTWCMMQETKNY*TERLEKAQSKL Trigger: CAGCTTGGACTGAGCCTTCTCTAGCCTCTCAGTCCAGTAGTTCTTGGTCTCTTGCATCATACACCATGTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR TCA 72 bp | CAGGTTAATGAGACCCTTGGAAGGGCACAAGCATGGTaGGTTTGGGAGACTAAGGCCAACAGAAAAGAAACA | + |
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Preference number: 3 (lower is better) Translates to: QVNETLGRAQAW*VWETKANRKET Trigger: TGTTTCTTTTCTGTTGGCCTTAGTCTCCCAAACTCACCATGCTTGTGCCCTTCCAAGGGTCTCATTAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| 3UTR TCA 72 bp | CTAAGGCCAACAGAAAAGAAACAGGATCCCCACAGATaGAACATTGAAAGGTTATGTCTGAGTCTGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: LRPTEKKQDPHR*NIERLCLSLKL Trigger: CAGCTTCAGACTCAGACATAACCTTTCAATGTTTCATCTGTGGGGATCCTGTTTCTTTTCTGTTGGCCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGACGGATGCGGTGCCGGTaGCAGCGGCCGCCAAACCCG | + |
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Preference number: 4 (lower is better) Translates to: ASGPGTDANKCAASRFPGRMRCR*QRPPNP Trigger: CGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCG...TCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR TCA 90 bp | CATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAACGGATGCGGTGCCGGTaGCAGCGGCCGCCAAACCCG | + |
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Preference number: 4 (lower is better) Translates to: HARAQPQGLGQMPTSVLQRMRCR*QRPPNP Trigger: CGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCG...TTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR TCA 90 bp | AGAGGAGGCGGGAGGAGGCTACCACACTCCCACGACGACGTTCTGGCCAACAGTACTGGGAAGAGCACCTaGGGGAAGGACGCACGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RGGGRRLPHSHDDVLANSTGKST*GKDARW Trigger: CCACCGTGCGTCCTTCCCTCAGGTGCTCTTCCCAGT...ACTGTTGGCCAGAACGTCGTCGTGGGAGTGTGGTAGCCTCCTCCCGCCTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGACCCTTTCGGGGCAGCTaGTCTGAGGCCACACCCACT | + |
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Preference number: 4 (lower is better) Translates to: ASGPGTDANKCAASRFPGPFRGS*SEATPT Trigger: AGTGGGTGTGGCCTCAGATCAGCTGCCCCGAAAGGG...TCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR GCA 90 bp | GGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGCAGGTCCAGCAGCATaGCCAGCTGTGCTGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: GTDANKCAASRFPGDRGGAGPAA*PAVLGT Trigger: GGTGCCCAGCACAGCTGGGCATGCTGCTGGACCTGC...GCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR GCA 90 bp | TCCATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCACCAGCTCTCCTGCCTaGAGGTCCAGCAGCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: SMLELSLRAWDRCQQVCCTSSPA*RSSSMP Trigger: GGGCATGCTGCTGGACCTGCAGGCAGGAGAGCTGGT...GCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR CCA 90 bp | GATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGGTCAGGATACTCTGGTaGGCCCGCTCCTCTTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: DANKCAASRFPGDRGGGRVRILW*ARSSSP Trigger: CGGCGAAGAGGAGCGGGCCCACCAGAGTATCCTGAC...CCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR TCA 90 bp | ATATACTTGGAGATGCCAGCACTCTGTAACTGCAGCCTCTCACACTGGTCCACACGGATGCGGTGCCGGTaGCAGCGGCCGCCAAACCCG | + |
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Preference number: 4 (lower is better) Translates to: IYLEMPALCNCSLSHWSTRMRCR*QRPPNP Trigger: CGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCG...TGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
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| CDS-3UTR TCA 90 bp | CATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAACACCTCCTCCACGCCTaGGAGAGACCCGAGAACCGA | + |
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Preference number: 4 (lower is better) Translates to: HARAQPQGLGQMPTSVLQHLLHA*ERPENR Trigger: TCGGTTCTCGGGTCTCTCTCAGGCGTGGAGGAGGTG...TTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR TCA 90 bp | GGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGCACCTCCTCCACGCCTaGGAGAGACCCGAGAACCGA | + |
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Preference number: 4 (lower is better) Translates to: GLGQMPTSVLQAGFLETEHLLHA*ERPENR Trigger: TCGGTTCTCGGGTCTCTCTCAGGCGTGGAGGAGGTG...CTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGCCTGGGGATCCAAAATaGCCTCTGCTTCCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLRAWDRCQQVCCKQVSWPGDPK*PLLPRP Trigger: GGGCCGAGGAAGCAGAGGGCATTTTGGATCCCCAGG...CCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGACCAGCTCTCCTGCCTaGAGGTCCAGCAGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AWDRCQQVCCKQVSWRQRTSSPA*RSSSMP Trigger: GGGCATGCTGCTGGACCTGCAGGCAGGAGAGCTGGT...CCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGGTCAGGATACTCTGGTaGGCCCGCTCCTCTTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MLELSLRAWDRCQQVCCKVRILW*ARSSSP Trigger: CGGCGAAGAGGAGCGGGCCCACCAGAGTATCCTGAC...CTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | CAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGACTCAGCCTCTGGATaGTCAGGTCCCTCGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGQMPTSVLQAGFLETDSASG*SGPSLH Trigger: GTGCAGCGAGGGACCTGATCATCCAGAGGCTGAGTC...TGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | ATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCCTGGGGATCCAAAATaGCCTCTGCTTCCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MLELSLRAWDRCQQVCCKPGDPK*PLLPRP Trigger: GGGCCGAGGAAGCAGAGGGCATTTTGGATCCCCAGG...CTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGTGGCAGCCAGGGCATTaGGCCAGTGGTCAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQMPTSVLQAGFLETEEAWQPGH*ASGQSA Trigger: AGCGCTTTGACCACTGGCCCAATGCCCTGGCTGCCA...CGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGGCGGGAGGAGGCTACCACACTCCCACGACGACGTTCTGGCCAACAGTTTCACTATCCAGGCATaGAGCCCAGTCTGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGGGRRLPHSHDDVLANSFTIQA*SPVWKA Trigger: TGCCTTCCAGACTGGGCTCCATGCCTGGATAGTGAA...ACTGTTGGCCAGAACGTCGTCGTGGGAGTGTGGTAGCCTCCTCCCGCCTCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGCAGGAGAAGGCATTGTaGCCCAGGCGGCAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRAWDRCQQVCCKQVSWQEKAL*PRRQSL Trigger: CAATGACTGCCGCCTGGGCCACAATGCCTTCTCCTG...CCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | CCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGACTCAGCCTCTGGATaGTCAGGTCCCTCGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGTDANKCAASRFPGDRGDSASG*SGPSLH Trigger: GTGCAGCGAGGGACCTGATCATCCAGAGGCTGAGTC...TCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGGGTCATCCAGGTGGGTaGTCATGTCCACCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQGLGQMPTSVLQAGFLEGHPGG*SCPPCW Trigger: CCAACATGGTGGACATGATCACCCACCTGGATGACC...CTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | TGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGAGGGTCATCCAGGTGGGTaGTCATGTCCACCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CQQVCCKQVSWRQRRREEGHPGG*SCPPCW Trigger: CCAACATGGTGGACATGATCACCCACCTGGATGACC...CTCCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | CATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAACGCGAACGATGGAGATaGGCTGGTCAGCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HARAQPQGLGQMPTSVLQRERWR*AGQPQQ Trigger: TTGCTGTGGCTGACCAGCTCATCTCCATCGTTCGCG...TTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | ACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGCGCGAACGATGGAGATaGGCTGGTCAGCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TDANKCAASRFPGDRGGGRERWR*AGQPQQ Trigger: TTGCTGTGGCTGACCAGCTCATCTCCATCGTTCGCG...CCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | TGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGAGGATGCTGCCCACAGTTaGGTCAGTAGTGGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQQVCCKQVSWRQRRREEDAAHS*VSSGLQ Trigger: TTGGAGCCCACTACTGACGCAACTGTGGGCAGCATC...CTCCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | TTAAGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCCTGCAGGTCCAGCAGCATaGCCAGCTGTGCTGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LRLALLCPQLFLLAALYPAGPAA*PAVLGT Trigger: GGTGCCCAGCACAGCTGGGCATGCTGCTGGACCTGC...AGGGTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAAGACCAGCTCTCCTaGCTGCAGGTCCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGQMPTSVLQAGFLETEEDQLS*LQVQQH Trigger: ATGCTGCTGGACCTGCAGGCAGGAGAGCTGGTCTTC...CTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | TGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGAGACCAGACTCAGCCTCTaGATGATCAGGTCCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQQVCCKQVSWRQRRREETRLSL*MIRSLA Trigger: AGCGAGGGACCTGATCATCCAGAGGCTGAGTCTGGT...CTCCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | CATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAACAGGAGAAGGCATTGTaGCCCAGGCGGCAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HARAQPQGLGQMPTSVLQQEKAL*PRRQSL Trigger: CAATGACTGCCGCCTGGGCCACAATGCCTTCTCCTG...TTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGGCGGGAGGAGGCTACCACACTCCCACGACGACGTTCTGGCCAACAGTACGATGGAGATGAGCTaGTCAGCCACAGCAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RGGGRRLPHSHDDVLANSTMEMS*SATAKT Trigger: AGTCTTTGCTGTGGCTGACCAGCTCATCTCCATCGT...ACTGTTGGCCAGAACGTCGTCGTGGGAGTGTGGTAGCCTCCTCCCGCCTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | ATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGTCGGGGCAGCTGATCTaGGGCCACACCCACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: MLELSLRAWDRCQQVCCKSGQLI*GHTHFI Trigger: TATAAAGTGGGTGTGGCCTCAGATCAGCTGCCCCGA...CTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | CAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGATCGGGGCAGCTGATCTaGGGCCACACCCACTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: QMPTSVLQAGFLETEEAGSGQLI*GHTHFI Trigger: TATAAAGTGGGTGTGGCCTCAGATCAGCTGCCCCGA...TCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGCCTGACCTGCAAGGGTaGTGGGGAGGTGAATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGQMPTSVLQAGFLETEPDLQG*WGGESS Trigger: ACTAGATTCACCTCCCCATCACCCTTGCAGGTCAGG...CTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | CAGTTACCTGCCTGCCCAGCCATTTGCCCCCACTGTACCTTGTTGTATACTAGCCCTAGAAGCATGGCCTaGCCTGCAAGGGTGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPACPAICPHCTLLYTSPRSMA*PARVMG Trigger: CCCCATCACCCTTGCAGGTCAGGCCATGCTTCTAGG...GCTAGTATACAACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGCAGGTAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | GACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGCCAGCACTCTGTAACTaGAGCCTCTCACACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRCQQVCCKQVSWRQRRRPALCN*SLSHWS Trigger: GGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGG...CCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | GGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGCCAGCACTCTGTAACTaGAGCCTCTCACACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQMPTSVLQAGFLETEEAPALCN*SLSHWS Trigger: GGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGG...CGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | GGTTTCCTGGAGACAGAGGAGGCGGGAGGAGGCTACCACACTCCCACGACGACGCCATATACTTGGAGATaGCAGCACTCTGTAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GFLETEEAGGGYHTPTTTPYTWR*QHSVTA Trigger: TGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGG...CGTCGTCGTGGGAGTGTGGTAGCCTCCTCCCGCCTCCTCTGTCTCCAGGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCCTACGGATCAGGTCCCTCGCTaGACTAGCCATGACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLALLCPQLFLLAALYPTDQVPR*TSHDHC Trigger: GCAGTGGTCATGGCTAGTGCAGCGAGGGACCTGATC...CGTAGGGTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | CGTAGGTCCATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGTCCACCATGTTGGTaGGGAGGGTGTCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSMLELSLRAWDRCQQVCPPCW*GGCPVS Trigger: AGAAACTGGACACCCTCCGCACCAACATGGTGGACA...CACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATGGACCTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGACCAGACTCAGCCTCTaGATGATCAGGTCCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DRCQQVCCKQVSWRQRRRTRLSL*MIRSLA Trigger: AGCGAGGGACCTGATCATCCAGAGGCTGAGTCTGGT...CCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGTGGAGGTCATCCAGGTaGGTGATCATGTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: DANKCAASRFPGDRGGGRWRSSR*VIMSTM Trigger: CATGGTGGACATGATCACCCACCTGGATGACCTCCA...CCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | CTCACACGTAGGTCCATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAATGGAGGTCATCCAGGTaGGTGATCATGTCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTRRSMLELSLRAWDRCQWRSSR*VIMSTM Trigger: CATGGTGGACATGATCACCCACCTGGATGACCTCCA...TTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATGGACCTACGTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGAGGGCATTGGGCCAGTaGTCAAAGCGCTCTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGQMPTSVLQAGFLETERALGQ*SKRSGS Trigger: TGAACCAGAGCGCTTTGACCACTGGCCCAATGCCCT...CTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | TACCTGCCTGCCCAGCCATTTGCCCCCACTGTACCTTGTTGTATACTAGCCATGTGGCAGCCAGGGCATTaGGCCAGTGGTCAAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLPAQPFAPTVPCCILAMWQPGH*ASGQSA Trigger: AGCGCTTTGACCACTGGCCCAATGCCCTGGCTGCCA...CATGGCTAGTATACAACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGCAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGAGCCACAGCAAAGACTaGGAAGAGCACCTGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DANKCAASRFPGDRGGGRSHSKD*EEHLRE Trigger: TTCCCTCAGGTGCTCTTCCCAGTCTTTGCTGTGGCT...CCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | TGTCTGAGTCTGAAGCTGCTATCCAGAAGTTGCCCTGGGGAACACTCATGTCATCCCTTTCGGGGCAGCTaGTCTGAGGCCACACCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLSLKLLSRSCPGEHSCHPFRGS*SEATPT Trigger: AGTGGGTGTGGCCTCAGATCAGCTGCCCCGAAAGGG...ATGACATGAGTGTTCCCCAGGGCAACTTCTGGATAGCAGCTTCAGACTCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | GGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCTGTCCACCATGTTGGTaGGGAGGGTGTCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDANKCAASRFPGDRGGCPPCW*GGCPVS Trigger: AGAAACTGGACACCCTCCGCACCAACATGGTGGACA...GCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGCGAGGCACTTTGAGGGACTACAGTACTTCTCCAGTTACCTGCCTGCCGATGCTGCCCACAGTTaGGTCAGTAGTGGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAARHFEGLQYFSSYLPADAAHS*VSSGLQ Trigger: TTGGAGCCCACTACTGACGCAACTGTGGGCAGCATC...GGCAGGCAGGTAACTGGAGAAGTACTGTAGTCCCTCAAAGTGCCTCGCTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | AGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCCTACGAGGGCATTGGGCCAGTaGTCAAAGCGCTCTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLALLCPQLFLLAALYPTRALGQ*SKRSGS Trigger: TGAACCAGAGCGCTTTGACCACTGGCCCAATGCCCT...CGTAGGGTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGTTCACTATCCAGGCATaGAGCCCAGTCTGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGQMPTSVLQAGFLETEFTIQA*SPVWKA Trigger: TGCCTTCCAGACTGGGCTCCATGCCTGGATAGTGAA...CTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTCACCCTTCTCACACGTAGGTCCATGCTAGAGCTCAGCCTCAGGGCCTGGAGCCACAGCAAAGACTaGGAAGAGCACCTGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVTLLTRRSMLELSLRAWSHSKD*EEHLRE Trigger: TTCCCTCAGGTGCTCTTCCCAGTCTTTGCTGTGGCT...CCAGGCCCTGAGGCTGAGCTCTAGCATGGACCTACGTGTGAGAAGGGTGACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | TCCATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCACGATGGAGATGAGCTaGTCAGCCACAGCAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SMLELSLRAWDRCQQVCCTMEMS*SATAKT Trigger: AGTCTTTGCTGTGGCTGACCAGCTCATCTCCATCGT...GCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| 3UTR CAA 72 bp | GAAGGCTCAGTCCAAGCTGCTCTGCAGCGAGGCACTTaGAGGGACTACAGTACTTCTCCAGTTACCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSVQAALQRGT*RDYSTSPVTCL Trigger: CAGGCAGGTAACTGGAGAAGTACTGTAGTCCCTCAAAGTGCCTCGCTGCAGAGCAGCTTGGACTGAGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS-3UTR TCA 90 bp | GATTTATTAAGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCACTGGGAAGAGCACCTaGGGGAAGGACGCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLRLALLCPQLFLLAALTGKST*GKDARW Trigger: CCACCGTGCGTCCTTCCCTCAGGTGCTCTTCCCAGT...GAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCTTAATAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | TTTGTCACCCTTCTCACACGTAGGTCCATGCTAGAGCTCAGCCTCAGGGCCTGGATCCAAAATGCCCTCTaGTTCCTCGGCCCTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FVTLLTRRSMLELSLRAWIQNAL*FLGPLK Trigger: TTTGAGAGGGCCGAGGAAGCAGAGGGCATTTTGGAT...CCAGGCCCTGAGGCTGAGCTCTAGCATGGACCTACGTGTGAGAAGGGTGACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | ATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCGATCTTCAGACAGATaGAGTAAGGGGCTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLELSLRAWDRCQQVCCKRSSDR*SKGLTV Trigger: GACTGTCAGCCCCTTACTGCATCTGTCTGAAGATCG...CTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGATGCAGCCTCTCACACTaGTCCACAATCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASGPGTDANKCAASRFPGCSLSH*STILFL Trigger: GAGAAACAAGATTGTGGACCAGTGTGAGAGGCTGCA...TCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGCCTCGGCCATATACTTaGAGATGCCAGCACTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLGQMPTSVLQAGFLETEPRPYT*RCQHSV Trigger: TACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGG...CTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | AGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCCTACGATGACCACTGCTTTCTaGTTCTTCCCCTGCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RLALLCPQLFLLAALYPTMTTAF*FFPCRT Trigger: GGTCCTGCAGGGGAAGAACCAGAAAGCAGTGGTCAT...CGTAGGGTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGTGGCCAACAGTATCCTaGCAGGTTGTCCTTCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: DRCQQVCCKQVSWRQRRRWPTVS*QVVLRM Trigger: CATACGAAGGACAACCTGCCAGGATACTGTTGGCCA...CCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030088.12 |
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| 3UTR CAA 72 bp | CCTGCCTGCCCAGCCATTTGCCCCCACTGTACCTTGTaGTATACTAGCCATGCACAAGGTACCACACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PACPAICPHCTL*YTSHAQGTTLD Trigger: ATCCAGTGTGGTACCTTGTGCATGGCTAGTATACAACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| 3UTR CAA 72 bp | TTCTGGTTCTTCCCCTGCAGGACCTCGGCCATATACTaGGAGATGCCAGCACTCTGTAACTGCAGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FWFFPCRTSAIY*EMPALCNCSLS Trigger: TGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGAACCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132237.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAATCCAAAATGCCCTCTaGTTCCTCGGCCCTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGTDANKCAASRFPGDRGIQNAL*FLGPLK Trigger: TTTGAGAGGGCCGAGGAAGCAGAGGGCATTTTGGAT...TCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR GCA 90 bp | CCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGACGATCTTCAGACAGATaGAGTAAGGGGCTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGTDANKCAASRFPGDRGRSSDR*SKGLTV Trigger: GACTGTCAGCCCCTTACTGCATCTGTCTGAAGATCG...TCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGTGCAGCCTCTCACACTaGTCCACAATCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQMPTSVLQAGFLETEEACSLSH*STILFL Trigger: GAGAAACAAGATTGTGGACCAGTGTGAGAGGCTGCA...CGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGACCTCGGCCATATACTTaGAGATGCCAGCACTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGTDANKCAASRFPGDRGPRPYT*RCQHSV Trigger: TACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGG...TCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | CTCACACGTAGGTCCATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAAAATTTCTCCGAATCCTaGGGATCCAAAATGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTRRSMLELSLRAWDRCQNFSES*GSKMPS Trigger: AGAGGGCATTTTGGATCCCCAGGATTCGGAGAAATT...TTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATGGACCTACGTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAAATTTCTCCGAATCCTaGGGATCCAAAATGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGPGTDANKCAASRFPGNFSES*GSKMPS Trigger: AGAGGGCATTTTGGATCCCCAGGATTCGGAGAAATT...TCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| 3UTR CAA 72 bp | CACACTGGATGCCAGAGGCACAGGTTAATGAGACCCTaGGAAGGGCACAAGCATGGTGAGTTTGGGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: HTGCQRHRLMRP*EGHKHGEFGRL Trigger: TAGTCTCCCAAACTCACCATGCTTGTGCCCTTCCAAGGGTCTCATTAACCTGTGCCTCTGGCATCCAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| 3UTR CAA 72 bp | TTACCTGCCTGCCCAGCCATTTGCCCCCACTGTACCTaGTTGTATACTAGCCATGCACAAGGTACCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LPACPAICPHCT*LYTSHAQGTTL Trigger: CAGTGTGGTACCTTGTGCATGGCTAGTATACAACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGCAGGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| CDS-3UTR GCA 90 bp | GGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCCCATATACTTGGAGATaGCAGCACTCTGTAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTDANKCAASRFPGDRGGPYTWR*QHSVTA Trigger: TGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGG...GCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| 3UTR CAA 72 bp | AAGGTTATGTCTGAGTCTGAAGCTGCTATCCAGAAGTaGCCCTGGGGAACACTCATGTCATTGAGGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVMSESEAAIQK*PWGTLMSLRKR Trigger: TCTTTTCCTCAATGACATGAGTGTTCCCCAGGGCAACTTCTGGATAGCAGCTTCAGACTCAGACATAACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
||
| CDS TCA 90 bp | CTCAGCTCCTCCGCGTGCTCCTCCGCTCGACGGATGCGGTGCCGGTaGCAGCGGCCGCCAAACCCGGCGCAGGTGGCGCATACCGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSACSSARRMRCR*QRPPNPAQVAHTGR Trigger: ACGGCCGGTATGCGCCACCTGCGCCGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCGTCGAGCGGAGGAGCACGCGGAGGAGCTGAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 ENSMUST00000132237.2 |
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| CDS CCA 90 bp | GACGGATGCGGTGCCGGTGACAGCGGCCGCCAAACCCGGCGCAGGTaGCGCATACCGGCCGTCGCTCCGAGAGGCAGAACCAGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DGCGAGDSGRQTRRR*RIPAVAPRGRTSSE Trigger: CTCTGAGCTGGTTCTGCCTCTCGGAGCGACGGCCGGTATGCGCCACCTGCGCCGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 ENSMUST00000132237.2 |
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| CDS GCA 90 bp | ACCGGCCGTCGCTCCGAGAGGCAGAACCAGCTCAGAGGCTCGAAGTaGTCGGGGCACAACTGGCTCCGCTCGGACCCCTGCTTCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGRRSERQNQLRGSK*SGHNWLRSDPCFGP Trigger: GGGACCGAAGCAGGGGTCCGAGCGGAGCCAGTTGTGCCCCGAGCACTTCGAGCCTCTGAGCTGGTTCTGCCTCTCGGAGCGACGGCCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 ENSMUST00000132237.2 |
||
| CDS GCA 90 bp | CAATCTTGTTTCTCAGCTCCTCCGCGTGCTCCTCCGCTCGACGGATaGGGTGCCGGTGACAGCGGCCGCCAAACCCGGCGCAGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QSCFSAPPRAPPLDG*GAGDSGRQTRRRWR Trigger: GCGCCACCTGCGCCGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCGTCGAGCGGAGGAGCACGCGGAGGAGCTGAGAAACAAGATTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS TCA 90 bp | CGGAGGGTGTCCAGTTTCTGGACTGCGTCCACCCAGTGTGCCCGCTaGGTCAGGATACTCTGGTGGGCCCGCTCCTCTTCGCCGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RRVSSFWTASTQCAR*VRILWWARSSSPCT Trigger: GGTGCACGGCGAAGAGGAGCGGGCCCACCAGAGTATCCTGACTCAGCGGGCACACTGGGTGGACGCAGTCCAGAAACTGGACACCCTCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS GCA 90 bp | GTTGGTGCGGAGGGTGTCCAGTTTCTGGACTGCGTCCACCCAGTGTaGCCGCTGAGTCAGGATACTCTGGTGGGCCCGCTCCTCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGAEGVQFLDCVHPV*PLSQDTLVGPLLFA Trigger: GGCGAAGAGGAGCGGGCCCACCAGAGTATCCTGACTCAGCGGGCACACTGGGTGGACGCAGTCCAGAAACTGGACACCCTCCGCACCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 90 bp | GAGCACCTGAGGGAAGGACGCACGGTGGATATGAAGCACCGTCCCTaGGGCAGGCTCGTAGAAGACCAGCTCTCCTGCCTGCAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EHLREGRTVDMKHRP*GRLVEDQLSCLQVQ Trigger: CTGGACCTGCAGGCAGGAGAGCTGGTCTTCTACGAGCCTGCCTCAGGGACGGTGCTTCATATCCACCGTGCGTCCTTCCCTCAGGTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 90 bp | GGGAGAAGACCCAGGAGAAGGCATTGTGGCCCAGGCGGCAGTCATTaGCAGAGCCCTTTCGGGGCAGCTGATCTGAGGCCACACCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GRRPRRRHCGPGGSH*QSPFGAADLRPHPL Trigger: AAGTGGGTGTGGCCTCAGATCAGCTGCCCCGAAAGGGCTCTGGCAATGACTGCCGCCTGGGCCACAATGCCTTCTCCTGGGTCTTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR CAA 90 bp | GGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGTGGCAGCCAGGGCATaGGGCCAGTGGTCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GQMPTSVLQAGFLETEEAVAARA*GQWSKR Trigger: GCGCTTTGACCACTGGCCCAATGCCCTGGCTGCCAC...CGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR CAA 90 bp | TGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAGAGGAGGCGGGAGGAGACCCAGGAGAAGGCATaGTGGCCCAGGCGGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CQQVCCKQVSWRQRRREETQEKA*WPRRQS Trigger: TGACTGCCGCCTGGGCCACAATGCCTTCTCCTGGGT...CTCCTCCCGCCTCCTCTGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 90 bp | CAGGCTCCGCACCAGACTCAGCCTCTGGATGATCAGGTCCCTCGCTaGACTAGCCATGACCACTGCTTTCTGGTTCTTCCCCTGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QAPHQTQPLDDQVPR*TSHDHCFLVLPLQD Trigger: GTCCTGCAGGGGAAGAACCAGAAAGCAGTGGTCATGGCTAGTGCAGCGAGGGACCTGATCATCCAGAGGCTGAGTCTGGTGCGGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR CAA 90 bp | CAGTTACCTGCCTGCCCAGCCATTTGCCCCCACTGTACCTTGTTGTATACTAGCGTGGCAGCCAGGGCATaGGGCCAGTGGTCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLPACPAICPHCTLLYTSVAARA*GQWSKR Trigger: GCGCTTTGACCACTGGCCCAATGCCCTGGCTGCCAC...GCTAGTATACAACAAGGTACAGTGGGGGCAAATGGCTGGGCAGGCAGGTAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107449.4 |
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| CDS CCA 90 bp | AGGTCCGCGAACGATGGAGATGAGCTGGTCAGCCACAGCAAAGACTaGGAAGAGCACCTGAGGGAAGGACGCACGGTGGATATGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSANDGDELVSHSKD*EEHLREGRTVDMKH Trigger: GTGCTTCATATCCACCGTGCGTCCTTCCCTCAGGTGCTCTTCCCAGTCTTTGCTGTGGCTGACCAGCTCATCTCCATCGTTCGCGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR CAA 90 bp | CGTAGGTCCATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGCACTGGTCCACAATCTaGTTTCTCAGCTCCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRSMLELSLRAWDRCQQVHWSTI*FLSSSA Trigger: CGCGGAGGAGCTGAGAAACAAGATTGTGGACCAGTG...CACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCATGGACCTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 90 bp | GTGAATCTAGTCTCACTGTGGCCAGAGGTCCGCGAACGATGGAGATaGGCTGGTCAGCCACAGCAAAGACTGGGAAGAGCACCTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VNLVSLWPEVRERWR*AGQPQQRLGRAPEG Trigger: TCCCTCAGGTGCTCTTCCCAGTCTTTGCTGTGGCTGACCAGCTCATCTCCATCGTTCGCGGACCTCTGGCCACAGTGAGACTAGATTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 90 bp | TGGCCAACAGTATCCTGGCAGGTTGTCCTTCGTATGCTGCAAGGGTaGTGGGGAGGTGAATCTAGTCTCACTGTGGCCAGAGGTCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WPTVSWQVVLRMLQG*WGGESSLTVARGPR Trigger: TCGCGGACCTCTGGCCACAGTGAGACTAGATTCACCTCCCCATCACCCTTGCAGCATACGAAGGACAACCTGCCAGGATACTGTTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030088.12 |
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| CDS GCA 90 bp | CAGCCTCTGGATGATCAGGTCCCTCGCTGCACTAGCCATGACCACTaGTTTCTGGTTCTTCCCCTGCAGGACCTCGGCCATATACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPLDDQVPRCTSHDH*FLVLPLQDLGHILG Trigger: TCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGAACCAGAAAGCAGTGGTCATGGCTAGTGCAGCGAGGGACCTGATCATCCAGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR CAA 90 bp | AGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGACCTCGGCCATATACTaGGAGATGCCAGCACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLRAWDRCQQVCCKQVSWTSAIY*EMPALC Trigger: ACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGT...CCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS-3UTR CAA 90 bp | ATGCTAGAGCTCAGCCTCAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGATCATGTCCACCATGTaGGTGCGGAGGGTGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MLELSLRAWDRCQQVCCKIMSTM*VRRVSS Trigger: ACTGGACACCCTCCGCACCAACATGGTGGACATGAT...CTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTGAGGCTGAGCTCTAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS CCA 90 bp | TGGATGATCAGGTCCCTCGCTGCACTAGCCATGACCACTGCTTTCTaGTTCTTCCCCTGCAGGACCTCGGCCATATACTTGGAGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WMIRSLAALAMTTAF*FFPCRTSAIYLEMP Trigger: TGGCATCTCCAAGTATATGGCCGAGGTCCTGCAGGGGAAGAACCAGAAAGCAGTGGTCATGGCTAGTGCAGCGAGGGACCTGATCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCTGGGACAGATGCCAACAAGTGTGCTGCAAGCAGGTTTCCTGGAGACAACCTCGGCCATATACTaGGAGATGCCAGCACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QGLGQMPTSVLQAGFLETTSAIY*EMPALC Trigger: ACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGT...TGTCTCCAGGAAACCTGCTTGCAGCACACTTGTTGGCATCTGTCCCAGGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CAA 90 bp | GATTTATTAAGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCACCCAGGAGAAGGCATaGTGGCCCAGGCGGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLLRLALLCPQLFLLAALTQEKA*WPRRQS Trigger: TGACTGCCGCCTGGGCCACAATGCCTTCTCCTGGGT...GAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCTTAATAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 90 bp | AAATCTCCTGTTCCCTCTGAATCAGCTGGAGGTCATCCAGGTGGGTaGTCATGTCCACCATGTTGGTGCGGAGGGTGTCCAGTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSPVPSESAGGHPGG*SCPPCWCGGCPVSG Trigger: TCCAGAAACTGGACACCCTCCGCACCAACATGGTGGACATGATCACCCACCTGGATGACCTCCAGCTGATTCAGAGGGAACAGGAGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS GCA 90 bp | TGCAGGACCTCGGCCATATACTTGGAGATGCCAGCACTCTGTAACTaGAGCCTCTCACACTGGTCCACAATCTTGTTTCTCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRTSAIYLEMPALCN*SLSHWSTILFLSSS Trigger: GGAGGAGCTGAGAAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGAGGTCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS GCA 90 bp | TCCTCCACGCCTGAGAGAGACCCGAGAACCGATGCTGCCCACAGTTaGGTCAGTAGTGGGCTCCAAGCACACTTCTCATTAAAGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSTPERDPRTDAAHS*VSSGLQAHFSLKLN Trigger: ATTAAGCTTTAATGAGAAGTGTGCTTGGAGCCCACTACTGACGCAACTGTGGGCAGCATCGGTTCTCGGGTCTCTCTCAGGCGTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS-3UTR CAA 90 bp | TTATTAAGGCTAGCTCTCCTTTGCCCTCAGCTTTTCTTGCTTGCCGCTCTCTACCACTGGTCCACAATCTaGTTTCTCAGCTCCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLRLALLCPQLFLLAALYHWSTI*FLSSSA Trigger: CGCGGAGGAGCTGAGAAACAAGATTGTGGACCAGTG...GTAGAGAGCGGCAAGCAAGAAAAGCTGAGGGCAAAGGAGAGCTAGCCTTAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
||
| CDS TCA 72 bp | TCCGCGTGCTCCTCCGCTCGACGGATGCGGTGCCGGTaGCAGCGGCCGCCAAACCCGGCGCAGGTGGCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SACSSARRMRCR*QRPPNPAQVAH Trigger: ATGCGCCACCTGCGCCGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCGTCGAGCGGAGGAGCACGCGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 ENSMUST00000132237.2 |
||
| CDS CCA 72 bp | GGTGCCGGTGACAGCGGCCGCCAAACCCGGCGCAGGTaGCGCATACCGGCCGTCGCTCCGAGAGGCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: GAGDSGRQTRRR*RIPAVAPRGRT Trigger: GGTTCTGCCTCTCGGAGCGACGGCCGGTATGCGCCACCTGCGCCGGGTTTGGCGGCCGCTGTCACCGGCACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 ENSMUST00000132237.2 |
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| CDS GCA 72 bp | TTCTCAGCTCCTCCGCGTGCTCCTCCGCTCGACGGATaGGGTGCCGGTGACAGCGGCCGCCAAACCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: FSAPPRAPPLDG*GAGDSGRQTRR Trigger: GCGCCGGGTTTGGCGGCCGCTGTCACCGGCACCGCATCCGTCGAGCGGAGGAGCACGCGGAGGAGCTGAGAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 ENSMUST00000132237.2 |
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| CDS GCA 72 bp | CGCTCCGAGAGGCAGAACCAGCTCAGAGGCTCGAAGTaGTCGGGGCACAACTGGCTCCGCTCGGACCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RSERQNQLRGSK*SGHNWLRSDPC Trigger: GCAGGGGTCCGAGCGGAGCCAGTTGTGCCCCGAGCACTTCGAGCCTCTGAGCTGGTTCTGCCTCTCGGAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 ENSMUST00000132237.2 |
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| CDS GCA 72 bp | GAGGGTGTCCAGTTTCTGGACTGCGTCCACCCAGTGTaGCCGCTGAGTCAGGATACTCTGGTGGGCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: EGVQFLDCVHPV*PLSQDTLVGPL Trigger: GAGCGGGCCCACCAGAGTATCCTGACTCAGCGGGCACACTGGGTGGACGCAGTCCAGAAACTGGACACCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 72 bp | TCCAGTTTCTGGACTGCGTCCACCCAGTGTGCCCGCTaGGTCAGGATACTCTGGTGGGCCCGCTCCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SSFWTASTQCAR*VRILWWARSSS Trigger: CGAAGAGGAGCGGGCCCACCAGAGTATCCTGACTCAGCGGGCACACTGGGTGGACGCAGTCCAGAAACTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 72 bp | AGGGAAGGACGCACGGTGGATATGAAGCACCGTCCCTaGGGCAGGCTCGTAGAAGACCAGCTCTCCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: REGRTVDMKHRP*GRLVEDQLSCL Trigger: CAGGCAGGAGAGCTGGTCTTCTACGAGCCTGCCTCAGGGACGGTGCTTCATATCCACCGTGCGTCCTTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | ATACTCTGGTGGGCCCGCTCCTCTTCGCCGTGCACCTaGTCCAATAACCGCTGTTCCTCACTCTCACACAGG | + |
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Preference number: 6 (lower is better) Translates to: ILWWARSSSPCT*SNNRCSSLSHR Trigger: CCTGTGTGAGAGTGAGGAACAGCGGTTATTGGAGCAGGTGCACGGCGAAGAGGAGCGGGCCCACCAGAGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | GTCAGGATACTCTGGTGGGCCCGCTCCTCTTCGCCGTaGACCTGCTCCAATAACCGCTGTTCCTCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VRILWWARSSSP*TCSNNRCSSLS Trigger: TGAGAGTGAGGAACAGCGGTTATTGGAGCAGGTGCACGGCGAAGAGGAGCGGGCCCACCAGAGTATCCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | CACCATGTTGGTGCGGAGGGTGTCCAGTTTCTGGACTaGGTCCACCCAGTGTGCCCGCTGAGTCAGGATACT | + |
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Preference number: 6 (lower is better) Translates to: HHVGAEGVQFLD*VHPVCPLSQDT Trigger: AGTATCCTGACTCAGCGGGCACACTGGGTGGACGCAGTCCAGAAACTGGACACCCTCCGCACCAACATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS CAA 90 bp | ATCCAGGCATGGAGCCCAGTCTGGAAGGCAGTGGCAGCCAGGGCATaGGGCCAGTGGTCAAAGCGCTCTGGTTCATCTGAGCAGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: IQAWSPVWKAVAARA*GQWSKRSGSSEQTL Trigger: TAAGGTCTGCTCAGATGAACCAGAGCGCTTTGACCACTGGCCCAATGCCCTGGCTGCCACTGCCTTCCAGACTGGGCTCCATGCCTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 72 bp | GTCTCACTGTGGCCAGAGGTCCGCGAACGATGGAGATaGGCTGGTCAGCCACAGCAAAGACTGGGAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VSLWPEVRERWR*AGQPQQRLGRA Trigger: TGCTCTTCCCAGTCTTTGCTGTGGCTGACCAGCTCATCTCCATCGTTCGCGGACCTCTGGCCACAGTGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | GATGATCAGGTCCCTCGCTGCACTAGCCATGACCACTaGTTTCTGGTTCTTCCCCTGCAGGACCTCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: DDQVPRCTSHDH*FLVLPLQDLGH Trigger: ATGGCCGAGGTCCTGCAGGGGAAGAACCAGAAAGCAGTGGTCATGGCTAGTGCAGCGAGGGACCTGATCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 72 bp | GTTCCCTCTGAATCAGCTGGAGGTCATCCAGGTGGGTaGTCATGTCCACCATGTTGGTGCGGAGGGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VPSESAGGHPGG*SCPPCWCGGCP Trigger: TGGACACCCTCCGCACCAACATGGTGGACATGATCACCCACCTGGATGACCTCCAGCTGATTCAGAGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 72 bp | GACAGTCCTTTCATCAATCAGCACCTCCTCCACGCCTaGGAGAGACCCGAGAACCGATGCTGCCCACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: DSPFINQHLLHA*ERPENRCCPQL Trigger: CAACTGTGGGCAGCATCGGTTCTCGGGTCTCTCTCAGGCGTGGAGGAGGTGCTGATTGATGAAAGGACTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | CACCAGACTCAGCCTCTGGATGATCAGGTCCCTCGCTaGACTAGCCATGACCACTGCTTTCTGGTTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HQTQPLDDQVPR*TSHDHCFLVLP Trigger: GGGAAGAACCAGAAAGCAGTGGTCATGGCTAGTGCAGCGAGGGACCTGATCATCCAGAGGCTGAGTCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | CCTGAGAGAGACCCGAGAACCGATGCTGCCCACAGTTaGGTCAGTAGTGGGCTCCAAGCACACTTCTCATTA | + |
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Preference number: 6 (lower is better) Translates to: PERDPRTDAAHS*VSSGLQAHFSL Trigger: TAATGAGAAGTGTGCTTGGAGCCCACTACTGACGCAACTGTGGGCAGCATCGGTTCTCGGGTCTCTCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS CCA 72 bp | GAGATGCCAGCACTCTGTAACTGCAGCCTCTCACACTaGTCCACAATCTTGTTTCTCAGCTCCTCCGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: EMPALCNCSLSH*STILFLSSSAC Trigger: GCACGCGGAGGAGCTGAGAAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 72 bp | GGGTCCTTCGATCTTCAGACAGATGCAGTAAGGGGCTaGCAGTCCTTTCATCAATCAGCACCTCCTCCACGC | + |
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Preference number: 6 (lower is better) Translates to: GSFDLQTDAVRG*QSFHQSAPPPR Trigger: GCGTGGAGGAGGTGCTGATTGATGAAAGGACTGTCAGCCCCTTACTGCATCTGTCTGAAGATCGAAGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS TCA 72 bp | GCAGTCATTGCCAGAGCCCTTTCGGGGCAGCTGATCTaGGGCCACACCCACTTTATAAGCACAACTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: AVIARALSGQLI*GHTHFISTTVF Trigger: AAACACAGTTGTGCTTATAAAGTGGGTGTGGCCTCAGATCAGCTGCCCCGAAAGGGCTCTGGCAATGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS CAA 90 bp | CAGTGGTCAAAGCGCTCTGGTTCATCTGAGCAGACCTTAGACTTCTaGGCAATGAAGGTCAGGGTCCTTCGATCTTCAGACAGATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QWSKRSGSSEQTLDF*AMKVRVLRSSDRCS Trigger: ACTGCATCTGTCTGAAGATCGAAGGACCCTGACCTTCATTGCCAAGAAGTCTAAGGTCTGCTCAGATGAACCAGAGCGCTTTGACCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | TCGGCCATATACTTGGAGATGCCAGCACTCTGTAACTaGAGCCTCTCACACTGGTCCACAATCTTGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAIYLEMPALCN*SLSHWSTILFL Trigger: GAGAAACAAGATTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGGCATCTCCAAGTATATGGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS GCA 72 bp | GCAATGAAGGTCAGGGTCCTTCGATCTTCAGACAGATaGAGTAAGGGGCTGACAGTCCTTTCATCAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: AMKVRVLRSSDR*SKGLTVLSSIS Trigger: GCTGATTGATGAAAGGACTGTCAGCCCCTTACTGCATCTGTCTGAAGATCGAAGGACCCTGACCTTCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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| CDS CAA 72 bp | AAGCGCTCTGGTTCATCTGAGCAGACCTTAGACTTCTaGGCAATGAAGGTCAGGGTCCTTCGATCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: KRSGSSEQTLDF*AMKVRVLRSSD Trigger: GTCTGAAGATCGAAGGACCCTGACCTTCATTGCCAAGAAGTCTAAGGTCTGCTCAGATGAACCAGAGCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030088.12 ENSMUST00000107449.4 |
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