Pregenerated sensors for BSND (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025418Ensembl transcript IDs: ENSMUST00000054472.4
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCACCTCACCCTTGGCTGAGACAGGAGCAGGGACACCTGGTCTGTaGCCTATCAGCAGAGAGGAGGTGCCTGGTGGAGGCGTCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: VTSPLAETGAGTPGL*PISREEVPGGGVFT Trigger: AGTGAAGACGCCTCCACCAGGCACCTCCTCTCTGCTGATAGGTCACAGACCAGGTGTCCCTGCTCCTGTCTCAGCCAAGGGTGAGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | GTGCGTGAGTCCAACACCCATCAGAGGACCAAAACACAGTGGACATaGGGTTCTCAGAGGCCCTGGGTAGCACCACAGGAGGCCCAATCA | + |
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Preference number: 1 (lower is better) Translates to: VRESNTHQRTKTQWT*GSQRPWVAPQEAQS Trigger: TGATTGGGCCTCCTGTGGTGCTACCCAGGGCCTCTGAGAACCCCATGTCCACTGTGTTTTGGTCCTCTGATGGGTGTTGGACTCACGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR GCA 90 bp | TGGCTCCTTCCATGCTGGGCTGAGAACAGAGGGTTCTGCAAGACCTaGAGACAGGAGAGTGACTCTGCTCCCATCCACCTTCCATGCTGT | + |
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Preference number: 1 (lower is better) Translates to: WLLPCWAENRGFCKT*RQESDSAPIHLPCC Trigger: ACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTCTCAGCCCAGCATGGAAGGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | TGGGTAGCACCACAGGAGGCCCAATCAGAAGCTAGCATTAGGAGATaGAGAAGGGCTTCTGGGGGTCTGGCTGTCACACAGGACCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: WVAPQEAQSEASIRR*RRASGGLAVTQDLR Trigger: TCTGAGGTCCTGTGTGACAGCCAGACCCCCAGAAGCCCTTCTCCATCTCCTAATGCTAGCTTCTGATTGGGCCTCCTGTGGTGCTACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR TCA 90 bp | GCTGAGATCTGCATACGCCAAAGGTCTCCTGGGAACTCTGGTGAATaGAGTCAAGATGCTGTCCCTGGGCAGTGGCAAGCACCAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: AEICIRQRSPGNSGE*SQDAVPGQWQAPAR Trigger: TCTGGCTGGTGCTTGCCACTGCCCAGGGACAGCATCTTGACTTCATTCACCAGAGTTCCCAGGAGACCTTTGGCGTATGCAGATCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | CATCAGAGGACCAAAACACAGTGGACATGGGGTTCTCAGAGGCCCTaGGTAGCACCACAGGAGGCCCAATCAGAAGCTAGCATTAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: HQRTKTQWTWGSQRP*VAPQEAQSEASIRR Trigger: TCTCCTAATGCTAGCTTCTGATTGGGCCTCCTGTGGTGCTACCCAGGGCCTCTGAGAACCCCATGTCCACTGTGTTTTGGTCCTCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | CTAGGGGTTGGGATGCCAGGAAAACTAGCAGGAGAAAGGTCACTTTaGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAGCACAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LGVGMPGKLAGERSL*WVYRNGWEFTQHKG Trigger: CCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAAGTGACCTTTCTCCTGCTAGTTTTCCTGGCATCCCAACCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | CTGGAGAAAGCAGCAACACCTTTCTCCTTATGGCTCCTTCCATGCTaGGCTGAGAACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LEKAATPFSLWLLPC*AENRGFCKTCRQES Trigger: ACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTCTCAGCCCAGCATGGAAGGAGCCATAAGGAGAAAGGTGTTGCTGCTTTCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | AAACTAGCAGGAGAAAGGTCACTTTGGTGGGTGTATAGGAATGGGTaGGAGTTCACTCAGCACAAGGGGCCCTGGAAGAACACAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: KLAGERSLWWVYRNG*EFTQHKGPWKNTAQ Trigger: TTGAGCTGTGTTCTTCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAAGTGACCTTTCTCCTGCTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | AGCCTGGCACATAGCAGATGCTCAGTAAGTGCCAAGGGCACCAAGTaGAATTACTTCAGCAGCTGGATTTTGTCCATTCCAAACCAATGC | + |
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Preference number: 1 (lower is better) Translates to: SLAHSRCSVSAKGTK*NYFSSWILSIPNQC Trigger: GCATTGGTTTGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACTTACTGAGCATCTGCTATGTGCCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 90 bp | TGTGTTCCTTTCAGTTCCCAAGATGCTTCAGTTCACTGCCTCACTTaGTCCTCCATACAATCCTGTTTGGGACTTGGAAAACTGAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: CVPFSSQDASVHCLT*SSIQSCLGLGKLSP Trigger: AGGGCTCAGTTTTCCAAGTCCCAAACAGGATTGTATGGAGGACCAAGTGAGGCAGTGAACTGAAGCATCTTGGGAACTGAAAGGAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTAGACAGCATCGGCTCTaGGAGGGGTGCGTGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RGFCKTCRQESDSAPIHLRQHRL*EGCVSP Trigger: TGGACTCACGCACCCCTCTCAGAGCCGATGCTGTCT...AAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTGGGCTTCTGGGGGTCTaGCTGTCACACAGGACCTCA | + |
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Preference number: 2 (lower is better) Translates to: RGFCKTCRQESDSAPIHLGLLGV*LSHRTS Trigger: TGAGGTCCTGTGTGACAGCCAGACCCCCAGAAGCCC...AAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCTGAGACAGGAGCAGGGACACCTGGTCTGTGACCTATCAGCAGAGAGGCAGCACAAGGGGCCCTaGAAGAACACAGCTCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PWLRQEQGHLVCDLSAERQHKGP*KNTAQA Trigger: TGCTTGAGCTGTGTTCTTCCAGGGCCCCTTGTGCTG...CCTCTCTGCTGATAGGTCACAGACCAGGTGTCCCTGCTCCTGTCTCAGCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGAGGAGGTGCCTGGTGGAGGCGTCTTCACTGAAGAGGTAGAAATGCCCTGGCTCCTTCCATGCTaGGCTGAGAACAGAGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SREEVPGGGVFTEEVEMPWLLPC*AENRGF Trigger: GAACCCTCTGTTCTCAGCCCAGCATGGAAGGAGCCA...GGGCATTTCTACCTCTTCAGTGAAGACGCCTCCACCAGGCACCTCCTCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR GCA 90 bp | GACAGCAGCTACATGTCACCTCACCCTTGGCTGAGACAGGAGCAGGGACACCTGCTAACCTTCTCCCAGTaGCCTGCTCTTAGACATCTC | + |
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Preference number: 2 (lower is better) Translates to: DSSYMSPHPWLRQEQGHLLTFSQ*PALRHL Trigger: GAGATGTCTAAGAGCAGGGCACTGGGAGAAGGTTAG...CAGGTGTCCCTGCTCCTGTCTCAGCCAAGGGTGAGGTGACATGTAGCTGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAGCACAAGGGGCCCTGGATGGGACTTGGAAAACTaGGCCCTTGAGGGGTCACAT | + |
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Preference number: 2 (lower is better) Translates to: FGGCIGMGGSSLSTRGPGWDLEN*ALEGSH Trigger: ATGTGACCCCTCAAGGGCTCAGTTTTCCAAGTCCCA...TCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR TCA 90 bp | TTATTTCATCCCCTGGTGCTGACTTTGCTCTGTCTGATGTGGGTCACAGTCAGTCACCTCACCCTTGGCTaGGACAGGAGCAGGGACACC | + |
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Preference number: 2 (lower is better) Translates to: LFHPLVLTLLCLMWVTVSHLTLG*DRSRDT Trigger: GGTGTCCCTGCTCCTGTCTCAGCCAAGGGTGAGGTG...ACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCACCAGGGGATGAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAGAGGAGGTGCCTGGTGGAGGCGTCTTCACTGAAGAGGTAGAAATGCCCCCCATCCACCTTCCATaGTGTGTTCCCAGCTTACAA | + |
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Preference number: 2 (lower is better) Translates to: SREEVPGGGVFTEEVEMPPIHLP*CVPSLQ Trigger: TTGTAAGCTGGGAACACAGCATGGAAGGTGGATGGG...GGGCATTTCTACCTCTTCAGTGAAGACGCCTCCACCAGGCACCTCCTCTCTGCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAGCACAAGGGGCCCTGGAGCTAGCATTAGGAGATaGAGAAGGGCTTCTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FGGCIGMGGSSLSTRGPGASIRR*RRASGG Trigger: ACCCCCAGAAGCCCTTCTCCATCTCCTAATGCTAGC...TCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTAAAACACAGTGGACATaGGGTTCTCAGAGGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RGFCKTCRQESDSAPIHLKTQWT*GSQRPW Trigger: CCAGGGCCTCTGAGAACCCCATGTCCACTGTGTTTT...AAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCTGAGACAGGAGCAGGGACACCTGGTCTGTGACCTATCAGCAGAGAGGGAAAGGTCACTTTGGTaGGTGTATAGGAATGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PWLRQEQGHLVCDLSAERERSLW*VYRNGW Trigger: CCACCCATTCCTATACACCCACCAAAGTGACCTTTC...CCTCTCTGCTGATAGGTCACAGACCAGGTGTCCCTGCTCCTGTCTCAGCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR TCA 90 bp | TTATTTCATCCCCTGGTGCTGACTTTGCTCTGTCTGATGTGGGTCACAGTCAGTGTGGTGTGTTCTCAGTaGGCACCGGTGGGCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: LFHPLVLTLLCLMWVTVSVVCSQ*APVGIS Trigger: GGAGATGCCCACCGGTGCTCACTGAGAACACACCAC...ACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCACCAGGGGATGAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCATCCTGTTTGGGACTTaGAAAACTGAGCCCTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ENRGFCKTCRQESDSAPIILFGT*KTEPLR Trigger: CCTCAAGGGCTCAGTTTTCCAAGTCCCAAACAGGAT...GATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAGCACAAGGGGCCCTGGAGTTCACTGCCTCACTTaGTCCTCCATACAATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: FGGCIGMGGSSLSTRGPGVHCLT*SSIQSC Trigger: ACAGGATTGTATGGAGGACCAAGTGAGGCAGTGAAC...TCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTTTACAGGGTCAGGGACCAATGACTGTTTTCCAAGCTGAGCCTGGCACAAGGACCAAAACACAGTaGACATGGGGTTCTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SPLQGQGPMTVFQAEPGTRTKTQ*TWGSQR Trigger: CCTCTGAGAACCCCATGTCCACTGTGTTTTGGTCCT...TGTGCCAGGCTCAGCTTGGAAAACAGTCATTGGTCCCTGACCCTGTAAAGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTCCATGCTGTGTTCCCAGCTTTCGCCTGGTTTTTATaGCTGTCTAGAAGCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: ADRRVTLLPSTFHAVFPAFAWFL*LSRSHF Trigger: AAAATGGCTTCTAGACAGTCATAAAAACCAGGCGAA...AGCTGGGAACACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGCCAAGGGCACCAAGTGGAATTACTTCAGCAGCTGGATTTTGTCCATTCCAAAACCCCACTGTCCCTaGAGGTCAGCAGAACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SAKGTKWNYFSSWILSIPKPHCP*RSAEQA Trigger: AGCTTGTTCTGCTGACCTGCAGGGACAGTGGGGTTT...TGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CAA 90 bp | GTGTGTTCCTTTCAGTTCCCAAGATGCTTCAGTTCACTGCCTCACTaGGTCCTCCATACAATCCTGTTTGGGACTTGGAAAACTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: VCSFQFPRCFSSLPH*VLHTILFGTWKTEP Trigger: GGGCTCAGTTTTCCAAGTCCCAAACAGGATTGTATGGAGGACCAAGTGAGGCAGTGAACTGAAGCATCTTGGGAACTGAAAGGAACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGACTCTGCTCCCATCCACCTTCCATGCTGTGTTCCCAGCTTACAAGACATTTCAGTTCCCAAGATaGTTCAGTTCACTGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RVTLLPSTFHAVFPAYKTFQFPR*FSSLPH Trigger: GTGAGGCAGTGAACTGAAGCATCTTGGGAACTGAAA...TGTCTTGTAAGCTGGGAACACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCATTTTGAAAAGTGGGTaGCAGAGACTAAGAGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: ENRGFCKTCRQESDSAPIILKSG*QRLRVH Trigger: ATGGACTCTTAGTCTCTGGCACCCACTTTTCAAAAT...GATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTTTACAGGGTCAGGGACCAATGACTGTTTTCCAAGCTGAGCCTGGCACAAAACCAATGCAAGTGTaGTTTGTGAGTTGTTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: SPLQGQGPMTVFQAEPGTKPMQV*FVSCCW Trigger: CCAACAACAACTCACAAAGCACACTTGCATTGGTTT...TGTGCCAGGCTCAGCTTGGAAAACAGTCATTGGTCCCTGACCCTGTAAAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTTCATCCCCTGGTGCTGACTTTGCTCTGTCTGATGTGGGTCACAGTCAGTGTGTATAGGAATGGGTaGGAGTTCACTCAGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LFHPLVLTLLCLMWVTVSVYRNG*EFTQHK Trigger: CTTGTGCTGAGTGAACTCCCACCCATTCCTATACAC...ACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCACCAGGGGATGAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCAAGGGCACCAAGTGGAATTACTTCAGCAGCTGGATTTTGTCCATTCCATTCTCATCTAGGGGTTaGGATGCCAGGAAAACTAGC | + |
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Preference number: 2 (lower is better) Translates to: SAKGTKWNYFSSWILSIPFSSRG*DARKTS Trigger: GCTAGTTTTCCTGGCATCCCAACCCCTAGATGAGAA...TGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCAATTACTTCAGCAGCTaGATTTTGTCCATTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: ENRGFCKTCRQESDSAPINYFSS*ILSIPN Trigger: GTTTGGAATGGACAAAATCCAGCTGCTGAAGTAATT...GATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAAGGGCACCAAGTGGAATTACTTCAGCAGCTGGATTTTGTCCATTCCATGCAAGTGTGCTTTGTaGGTTGTTGTTGGGTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SAKGTKWNYFSSWILSIPCKCAL*VVVGFS Trigger: AGAGAACCCAACAACAACTCACAAAGCACACTTGCA...TGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR TCA 72 bp | CCCTTGGCTGAGACAGGAGCAGGGACACCTGGTCTGTaGCCTATCAGCAGAGAGGAGGTGCCTGGTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PLAETGAGTPGL*PISREEVPGGG Trigger: GCCTCCACCAGGCACCTCCTCTCTGCTGATAGGTCACAGACCAGGTGTCCCTGCTCCTGTCTCAGCCAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR TCA 72 bp | CAGCAGAGAGGAGGTGCCTGGTGGAGGCGTCTTCACTaGAGAGGTAGAAATGCCCCAGACATGGGGAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: QQRGGAWWRRLH*RGRNAPDMGRV Trigger: AACCCTCCCCATGTCTGGGGCATTTCTACCTCTTCAGTGAAGACGCCTCCACCAGGCACCTCCTCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR GCA 72 bp | CCATGCTGGGCTGAGAACAGAGGGTTCTGCAAGACCTaGAGACAGGAGAGTGACTCTGCTCCCATCCACCTT | + |
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Preference number: 3 (lower is better) Translates to: PCWAENRGFCKT*RQESDSAPIHL Trigger: AAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTCTCAGCCCAGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 72 bp | ACCAAAACACAGTGGACATGGGGTTCTCAGAGGCCCTaGGTAGCACCACAGGAGGCCCAATCAGAAGCTAGC | + |
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Preference number: 3 (lower is better) Translates to: TKTQWTWGSQRP*VAPQEAQSEAS Trigger: GCTAGCTTCTGATTGGGCCTCCTGTGGTGCTACCCAGGGCCTCTGAGAACCCCATGTCCACTGTGTTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 72 bp | TCCAACACCCATCAGAGGACCAAAACACAGTGGACATaGGGTTCTCAGAGGCCCTGGGTAGCACCACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SNTHQRTKTQWT*GSQRPWVAPQE Trigger: CTCCTGTGGTGCTACCCAGGGCCTCTGAGAACCCCATGTCCACTGTGTTTTGGTCCTCTGATGGGTGTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 72 bp | GGCGTCTTCACTGAAGAGGTAGAAATGCCCCAGACATaGGGAGGGTTGTGGTGTGTTCTCAGTGAGCACCGG | + |
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Preference number: 3 (lower is better) Translates to: GVFTEEVEMPQT*GGLWCVLSEHR Trigger: CCGGTGCTCACTGAGAACACACCACAACCCTCCCCATGTCTGGGGCATTTCTACCTCTTCAGTGAAGACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 72 bp | CAGTACACAGACAGCAGCTACATGTCACCTCACCCTTaGCTGAGACAGGAGCAGGGACACCTGGTCTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: QYTDSSYMSPHP*LRQEQGHLVCD Trigger: GTCACAGACCAGGTGTCCCTGCTCCTGTCTCAGCCAAGGGTGAGGTGACATGTAGCTGCTGTCTGTGTACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR TCA 72 bp | GAACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTaGCTCTGCTCCCATCCACCTTCCATGCTGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: EQRVLQDLQTGE*LCSHPPSMLCS Trigger: GGAACACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR TCA 72 bp | ACACAGACAGCAGCTACATGTCACCTCACCCTTGGCTaGGACAGGAGCAGGGACACCTGGTCTGTGACCTAT | + |
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Preference number: 3 (lower is better) Translates to: TQTAATCHLTLG*DRSRDTWSVTY Trigger: ATAGGTCACAGACCAGGTGTCCCTGCTCCTGTCTCAGCCAAGGGTGAGGTGACATGTAGCTGCTGTCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR GCA 72 bp | GCTGTCACACAGGACCTCAGAAAACCCCACTGTCCCTaGAGGTCAGCAGAACAAGCTACAACCAGACGCATG | + |
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Preference number: 3 (lower is better) Translates to: AVTQDLRKPHCP*RSAEQATTRRM Trigger: CATGCGTCTGGTTGTAGCTTGTTCTGCTGACCTGCAGGGACAGTGGGGTTTTCTGAGGTCCTGTGTGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR CCA 72 bp | TTTCATCCCCTGGTGCTGACTTTGCTCTGTCTGATGTaGGTCACAGTCAGTCCTTGCCTGGGCCAGCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: FHPLVLTLLCLM*VTVSPCLGQQY Trigger: GTACTGCTGGCCCAGGCAAGGACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCACCAGGGGATGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| 3UTR TCA 72 bp | TGCATACGCCAAAGGTCTCCTGGGAACTCTGGTGAATaGAGTCAAGATGCTGTCCCTGGGCAGTGGCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CIRQRSPGNSGE*SQDAVPGQWQA Trigger: TGCTTGCCACTGCCCAGGGACAGCATCTTGACTTCATTCACCAGAGTTCCCAGGAGACCTTTGGCGTATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR TCA 72 bp | GATCTGCATACGCCAAAGGTCTCCTGGGAACTCTGGTaGATGAAGTCAAGATGCTGTCCCTGGGCAGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DLHTPKVSWELW*MKSRCCPWAVA Trigger: TGCCACTGCCCAGGGACAGCATCTTGACTTCATTCACCAGAGTTCCCAGGAGACCTTTGGCGTATGCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR GCA 72 bp | AGACAGGAGAGTGACTCTGCTCCCATCCACCTTCCATaGTGTGTTCCCAGCTTACAAGACAGCCAGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RQESDSAPIHLP*CVPSLQDSQLR Trigger: TCTGAGCTGGCTGTCTTGTAAGCTGGGAACACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCTCCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR GCA 72 bp | TCCTTCCCTCGGCTGAGACCCCTAACCTTCTCCCAGTaGCCTGCTCTTAGACATCTCAGAACAGGTCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SFPRLRPLTFSQ*PALRHLRTGLS Trigger: ACTTAGACCTGTTCTGAGATGTCTAAGAGCAGGGCACTGGGAGAAGGTTAGGGGTCTCAGCCGAGGGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | GGAGAAAGGTCACTTTGGTGGGTGTATAGGAATGGGTaGGAGTTCACTCAGCACAAGGGGCCCTGGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GERSLWWVYRNG*EFTQHKGPWKN Trigger: GTTCTTCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAAGTGACCTTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | GCAGCAACACCTTTCTCCTTATGGCTCCTTCCATGCTaGGCTGAGAACAGAGGGTTCTGCAAGACCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AATPFSLWLLPC*AENRGFCKTCR Trigger: TCTGCAGGTCTTGCAGAACCCTCTGTTCTCAGCCCAGCATGGAAGGAGCCATAAGGAGAAAGGTGTTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | ACCTGGCTGGAGAAAGCAGCAACACCTTTCTCCTTATaGCTCCTTCCATGCTGGGCTGAGAACAGAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TWLEKAATPFSL*LLPCWAENRGF Trigger: GAACCCTCTGTTCTCAGCCCAGCATGGAAGGAGCCATAAGGAGAAAGGTGTTGCTGCTTTCTCCAGCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR TCA 72 bp | AACACCTTTCTCCTTATGGCTCCTTCCATGCTGGGCTaGGAACAGAGGGTTCTGCAAGACCTGCAGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NTFLLMAPSMLG*EQRVLQDLQTG Trigger: TCCTGTCTGCAGGTCTTGCAGAACCCTCTGTTCTCAGCCCAGCATGGAAGGAGCCATAAGGAGAAAGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR GCA 72 bp | AAAGCAGCAACACCTTTCTCCTTATGGCTCCTTCCATaGTGGGCTGAGAACAGAGGGTTCTGCAAGACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KAATPFSLWLLP*WAENRGFCKTC Trigger: GCAGGTCTTGCAGAACCCTCTGTTCTCAGCCCAGCATGGAAGGAGCCATAAGGAGAAAGGTGTTGCTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR-3UTR CAA 90 bp | AACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACTGTCTAGAAGCCATTTaGAAAAGTGGGTGCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NRGFCKTCRQESDSAPIHCLEAI*KSGCQR Trigger: TCTCTGGCACCCACTTTTCAAAATGGCTTCTAGACA...GTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR-3UTR CAA 90 bp | AACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACGTGCTTTGTGAGTTGTaGTTGGGTTCTCTTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: NRGFCKTCRQESDSAPIHVLCEL*LGSLLV Trigger: TACCAGAAGAGAACCCAACAACAACTCACAAAGCAC...GTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR TCA 72 bp | GGTCCTCCATACAATCCTGTTTGGGACTTGGAAAACTaGGCCCTTGAGGGGTCACATGAAGACAGCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPPYNPVWDLEN*ALEGSHEDSSA Trigger: AGCACTGCTGTCTTCATGTGACCCCTCAAGGGCTCAGTTTTCCAAGTCCCAAACAGGATTGTATGGAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | GGGATGCCAGGAAAACTAGCAGGAGAAAGGTCACTTTaGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GMPGKLAGERSL*WVYRNGWEFTQ Trigger: CTGAGTGAACTCCCACCCATTCCTATACACCCACCAAAGTGACCTTTCTCCTGCTAGTTTTCCTGGCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | CCTCACTTGGTCCTCCATACAATCCTGTTTGGGACTTaGAAAACTGAGCCCTTGAGGGGTCACATGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PHLVLHTILFGT*KTEPLRGHMKT Trigger: TGTCTTCATGTGACCCCTCAAGGGCTCAGTTTTCCAAGTCCCAAACAGGATTGTATGGAGGACCAAGTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | ATGCCAGGAAAACTAGCAGGAGAAAGGTCACTTTGGTaGGTGTATAGGAATGGGTGGGAGTTCACTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MPGKLAGERSLW*VYRNGWEFTQH Trigger: GTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAAGTGACCTTTCTCCTGCTAGTTTTCCTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTCATCCCCTGGTGCTGACTTTGCTCTGTCTGATGTGGGTCACAGTCAGTTCCATACAATCCTGTTaGGGACTTGGAAAACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LFHPLVLTLLCLMWVTVSSIQSC*GLGKLS Trigger: GCTCAGTTTTCCAAGTCCCAAACAGGATTGTATGGA...ACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCACCAGGGGATGAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | AGTGCCAAGGGCACCAAGTGGAATTACTTCAGCAGCTaGATTTTGTCCATTCCAAACCAATGCAAGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAKGTKWNYFSS*ILSIPNQCKCA Trigger: AGCACACTTGCATTGGTTTGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | CATAGCAGATGCTCAGTAAGTGCCAAGGGCACCAAGTaGAATTACTTCAGCAGCTGGATTTTGTCCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HSRCSVSAKGTK*NYFSSWILSIP Trigger: TGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACTTACTGAGCATCTGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CCA 72 bp | TTCAGTTCCCAAGATGCTTCAGTTCACTGCCTCACTTaGTCCTCCATACAATCCTGTTTGGGACTTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSSQDASVHCLT*SSIQSCLGLGK Trigger: TTTTCCAAGTCCCAAACAGGATTGTATGGAGGACCAAGTGAGGCAGTGAACTGAAGCATCTTGGGAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | GACAGCAGCTACATGTCACCTCACCCTTGGCTGAGACAGGAGCAGGGACACCTGCCAGTGGACCCCTGCTaGCCCAGGGCACCTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSYMSPHPWLRQEQGHLPVDPC*PRAPAG Trigger: ACCGGCAGGTGCCCTGGGCCAGCAGGGGTCCACTGG...CAGGTGTCCCTGCTCCTGTCTCAGCCAAGGGTGAGGTGACATGTAGCTGCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | GTGCTGACTTTGCTCTGTCTGATGTGGGTCACAGTCAGTCCTTGCCTGGGCCAGGGCTGCTGCCTTCGCTaGAGCCCACGTCCAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLTLLCLMWVTVSPCLGQGCCLR*SPRPGR Trigger: ACGACCTGGACGTGGGCTCCAGCGAAGGCAGCAGCC...CTGGCCCAGGCAAGGACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR TCA 90 bp | GCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTCCATGCTGTGTTCCCAGCTCACCCCCGATCACCATaGCGCTGCCCATGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADRRVTLLPSTFHAVFPAHPRSP*RCPWHR Trigger: TCTATGCCATGGGCAGCGTCATGGTGATCGGGGGTG...AGCTGGGAACACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTCCATGCTGTGTTCCCAGCTGTGGCTCATCCCTGTTaGGGGATGGTTGCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADRRVTLLPSTFHAVFPAVAHPC*GMVAGC Trigger: GCAGCCTGCAACCATCCCCCAACAGGGATGAGCCAC...AGCTGGGAACACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR TCA 90 bp | TTTGGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAGCACAAGGGGCCCTGGAGCCTTGGGGACCCACTaGAGGGCTGCTCTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FGGCIGMGGSSLSTRGPGALGTH*RAALRM Trigger: CATTCTCAGAGCAGCCCTTCAGTGGGTCCCCAAGGC...TCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | GACAGCAGCTACATGTCACCTCACCCTTGGCTGAGACAGGAGCAGGGACACCTGGGGGACAAGATGCCTTaGAAGTCAGAGTCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSYMSPHPWLRQEQGHLGDKMP*KSESAG Trigger: GCCAGCAGACTCTGACTTCCAAGGCATCTTGTCCCC...CAGGTGTCCCTGCTCCTGTCTCAGCCAAGGGTGAGGTGACATGTAGCTGCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAGCACAAGGGGCCCTGGAAAGGGTGCAGAGCCTTaGGGACCCACTGAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGGCIGMGGSSLSTRGPGKGAEP*GPTEGL Trigger: CAGCCCTTCAGTGGGTCCCCAAGGCTCTGCACCCTT...TCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR GCA 90 bp | GTGCTGACTTTGCTCTGTCTGATGTGGGTCACAGTCAGTCCTTGCCTGGGCCAGCCATGGCATAGAAGGTaGCGTAGACCTGGGGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLTLLCLMWVTVSPCLGQPWHRR*RRPGVD Trigger: ATCGACCCCAGGTCTACGGCACCTTCTATGCCATGG...CTGGCCCAGGCAAGGACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR GCA 90 bp | ACATCTCAGAACAGGTCTAAGTTGTGTAGACCTGGCTGGAGAAAGCAGCAACACGATCCAGTGGACCCCTaGTGGCCCAGGGCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSQNRSKLCRPGWRKQQHDPVDP*WPRAPA Trigger: GGCAGGTGCCCTGGGCCAGCAGGGGTCCACTGGATC...GTGTTGCTGCTTTCTCCAGCCAGGTCTACACAACTTAGACCTGTTCTGAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | GCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTCCATGCTGTGTTCCCAGCTCAGGCTCAGGGCCTTTaGGGACAAGATGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ADRRVTLLPSTFHAVFPAQAQGL*GQDALE Trigger: TTCCAAGGCATCTTGTCCCCAAAGGCCCTGAGCCTG...AGCTGGGAACACAGCATGGAAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTATCCCTGTTGGGGGATaGTTGCAGGCTGCTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGFCKTCRQESDSAPIHLIPVGG*LQAAAF Trigger: GAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGAT...AAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGGGTGTATAGGAATGGGTGGGAGTTCACTCAGCACAAGGGGCCCTGGATCTTCTGCGCGTGCCTaGACAGTCTCCCCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FGGCIGMGGSSLSTRGPGSSARA*TVSPFI Trigger: GATGAAGGGGGAGACTGTCCAGGCACGCGCAGAAGA...TCCAGGGCCCCTTGTGCTGAGTGAACTCCCACCCATTCCTATACACCCACCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR GCA 90 bp | AACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACAGATCTTCCTCCTCCTaGTCCGGTTCTTCTGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NRGFCKTCRQESDSAPIHRSSSS*SGSSAR Trigger: ACGCGCAGAAGAACCGGAGCAGGAGGAGGAAGATCT...GTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCCAAGGGCACCAAGTGGAATTACTTCAGCAGCTGGATTTTGTCCATTCCACTCGGGGGCCAGCAGTaGCCTGGGGTCCTCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SAKGTKWNYFSSWILSIPLGGQQ*PGVLTV Trigger: TACAGTGAGGACCCCAGGCCACTGCTGGCCCCCGAG...TGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CAA 72 bp | ACTGAAGAGGTAGAAATGCCCCAGACATGGGGAGGGTaGTGGTGTGTTCTCAGTGAGCACCGGTGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TEEVEMPQTWGG*WCVLSEHRWAS Trigger: AGATGCCCACCGGTGCTCACTGAGAACACACCACAACCCTCCCCATGTCTGGGGCATTTCTACCTCTTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR TCA 90 bp | CCATCAGAGGACCAAAACACAGTGGACATGGGGTTCTCAGAGGCCCTGGGTAGCCCTCACTGTAGCCCATaGCCTTCATTTGGATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSEDQNTVDMGFSEALGSPHCSP*PSFGCE Trigger: CTCACATCCAAATGAAGGTCATGGGCTACAGTGAGG...GCTACCCAGGGCCTCTGAGAACCCCATGTCCACTGTGTTTTGGTCCTCTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | AACAGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACGATGTGAGTGAAGTCTaGGAGGCTCTGGTCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRGFCKTCRQESDSAPIHDVSEV*EALVIG Trigger: GCCTATGACCAGAGCCTCCCAGACTTCACTCACATC...GTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR GCA 90 bp | TCCCATCCACCTTCCATGCTGTGTTCCCAGCTTACAAGACAGCCAGCTCAGACCCCTTTGGGGACAAGATaGCTTGGAAGTCAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHPPSMLCSQLTRQPAQTPLGTR*LGSQSL Trigger: CAGACTCTGACTTCCAAGGCATCTTGTCCCCAAAGG...GGTCTGAGCTGGCTGTCTTGTAAGCTGGGAACACAGCATGGAAGGTGGATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR GCA 90 bp | AGAGGGTTCTGCAAGACCTGCAGACAGGAGAGTGACTCTGCTCCCATCCACCTTGACCCACTGAAGGGCTaGTCTGAGAATGGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGFCKTCRQESDSAPIHLDPLKG*SENGIS Trigger: AGAAATCCCATTCTCAGAGCAGCCCTTCAGTGGGTC...AAGGTGGATGGGAGCAGAGTCACTCTCCTGTCTGCAGGTCTTGCAGAACCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | AATGCAAGTGTGCTTTGTGAGTTGTTGTTGGGTTCTCTTCTGGTAGCTTTTCGCGGGCCAGCAGTGGCCTaGGGTCCTCACTGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NASVLCELLLGSLLVAFRGPAVA*GPHCSP Trigger: TGGGCTACAGTGAGGACCCCAGGCCACTGCTGGCCC...GCGAAAAGCTACCAGAAGAGAACCCAACAACAACTCACAAAGCACACTTGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR TCA 90 bp | ACATCTCAGAACAGGTCTAAGTTGTGTAGACCTGGCTGGAGAAAGCAGCAACACAGAGGCCCAGCACGATaGAGCCGATTCGGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQNRSKLCRPGWRKQQHRGPAR*SRFGRS Trigger: AGACCTTCCGAATCGGCTTCATCGTGCTGGGCCTCT...GTGTTGCTGCTTTCTCCAGCCAGGTCTACACAACTTAGACCTGTTCTGAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR TCA 90 bp | AATGCAAGTGTGCTTTGTGAGTTGTTGTTGGGTTCTCTTCTGGTAGCTTTTCGCGAGGCTCGCCTTCCCTaGCACTGCTGGCTCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NASVLCELLLGSLLVAFREARLP*HCWLLS Trigger: AGACAGGAGCCAGCAGTGTCAGGGAAGGCGAGCCTC...GCGAAAAGCTACCAGAAGAGAACCCAACAACAACTCACAAAGCACACTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCCAAGGGCACCAAGTGGAATTACTTCAGCAGCTGGATTTTGTCCATTCCAACCATTGCTGCTTTCTaGGTAGCGCTGCCTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAKGTKWNYFSSWILSIPTIAAF*VALPPV Trigger: CACGGGAGGCAGCGCTACCCAGAAAGCAGCAATGGT...TGGAATGGACAAAATCCAGCTGCTGAAGTAATTCCACTTGGTGCCCTTGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CAA 72 bp | CATACAATCCTGTTTGGGACTTGGAAAACTGAGCCCTaGAGGGGTCACATGAAGACAGCAGTGCTGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTILFGTWKTEP*RGHMKTAVLSG Trigger: GCCTGACAGCACTGCTGTCTTCATGTGACCCCTCAAGGGCTCAGTTTTCCAAGTCCCAAACAGGATTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CAA 72 bp | TTTCAGTTCCCAAGATGCTTCAGTTCACTGCCTCACTaGGTCCTCCATACAATCCTGTTTGGGACTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQFPRCFSSLPH*VLHTILFGTWK Trigger: TTTCCAAGTCCCAAACAGGATTGTATGGAGGACCAAGTGAGGCAGTGAACTGAAGCATCTTGGGAACTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CAA 72 bp | CCATTCCAAACCAATGCAAGTGTGCTTTGTGAGTTGTaGTTGGGTTCTCTTCTGGTAGCTTTTCGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PFQTNASVLCEL*LGSLLVAFRLV Trigger: AACCAGGCGAAAAGCTACCAGAAGAGAACCCAACAACAACTCACAAAGCACACTTGCATTGGTTTGGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CAA 72 bp | TGTCCATTCCAAACCAATGCAAGTGTGCTTTGTGAGTaGTTGTTGGGTTCTCTTCTGGTAGCTTTTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPFQTNASVLCE*LLGSLLVAFRL Trigger: CAGGCGAAAAGCTACCAGAAGAGAACCCAACAACAACTCACAAAGCACACTTGCATTGGTTTGGAATGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| 3UTR CAA 72 bp | TTCCAAACCAATGCAAGTGTGCTTTGTGAGTTGTTGTaGGGTTCTCTTCTGGTAGCTTTTCGCCTGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQTNASVLCELL*GSLLVAFRLVF Trigger: AAAAACCAGGCGAAAAGCTACCAGAAGAGAACCCAACAACAACTCACAAAGCACACTTGCATTGGTTTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS CCA 90 bp | GCTGGCCCAGGGCACCTGCCGGTGTGGCTCATCCCTGTTGGGGGATaGTTGCAGGCTGCTGCCTTCGCTGGAGCCCACGTCCAGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGPGHLPVWLIPVGG*LQAAAFAGAHVQVV Trigger: GACGACCTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCCTGGGCCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
||
| CDS CCA 90 bp | GACCCCTGCTGGCCCAGGGCACCTGCCGGTGTGGCTCATCCCTGTTaGGGGATGGTTGCAGGCTGCTGCCTTCGCTGGAGCCCACGTCCA | + |
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Preference number: 5 (lower is better) Translates to: DPCWPRAPAGVAHPC*GMVAGCCLRWSPRP Trigger: TGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCCTGGGCCAGCAGGGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS TCA 90 bp | CCGGAGCCTCCATCCAGGCCTGAGCAGTACGAGGCTCGCCTTCCCTaGCACTGCTGGCTCCTGTCTTCAGCTCGGGGGCCAGCAGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: PEPPSRPEQYEARLP*HCWLLSSARGPAVA Trigger: GGCCACTGCTGGCCCCCGAGCTGAAGACAGGAGCCAGCAGTGTCAGGGAAGGCGAGCCTCGTACTGCTCAGGCCTGGATGGAGGCTCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 90 bp | GCCCAGGGCACCTGCCGGTGTGGCTCATCCCTGTTGGGGGATGGTTaGAGGCTGCTGCCTTCGCTGGAGCCCACGTCCAGGTCGTCATGG | + |
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Preference number: 5 (lower is better) Translates to: AQGTCRCGSSLLGDG*RLLPSLEPTSRSSW Trigger: CCATGACGACCTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 90 bp | GCGCGTGCCTGGACAGTCTCCCCCTTCATCCTCAGGGACCATTGCTaGTTTCTGGGTAGCGCTGCCTCCCGTGCCTGCCCGTCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: ARAWTVSPFILRDHC*FLGSAASRACPSRT Trigger: GGTCCTGGACGGGCAGGCACGGGAGGCAGCGCTACCCAGAAAGCAGCAATGGTCCCTGAGGATGAAGGGGGAGACTGTCCAGGCACGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 90 bp | GAAGCGATCCAGTGGACCCCTGCTGGCCCAGGGCACCTGCCGGTGTaGCTCATCCCTGTTGGGGGATGGTTGCAGGCTGCTGCCTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: EAIQWTPAGPGHLPV*LIPVGGWLQAAAFA Trigger: AGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCCTGGGCCAGCAGGGGTCCACTGGATCGCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 90 bp | GCACCTGCCGGTGTGGCTCATCCCTGTTGGGGGATGGTTGCAGGCTaGTGCCTTCGCTGGAGCCCACGTCCAGGTCGTCATGGAATGAGG | + |
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Preference number: 5 (lower is better) Translates to: APAGVAHPCWGMVAG*CLRWSPRPGRHGMR Trigger: CCTCATTCCATGACGACCTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 90 bp | GTGGCTCATCCCTGTTGGGGGATGGTTGCAGGCTGCTGCCTTCGCTaGAGCCCACGTCCAGGTCGTCATGGAATGAGGCCAAGGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VAHPCWGMVAGCCLR*SPRPGRHGMRPRVQ Trigger: CTGCACCCTTGGCCTCATTCCATGACGACCTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 90 bp | TTCCCTGACACTGCTGGCTCCTGTCTTCAGCTCGGGGGCCAGCAGTaGCCTGGGGTCCTCACTGTAGCCCATGACCTTCATTTGGATGTG | + |
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Preference number: 5 (lower is better) Translates to: FPDTAGSCLQLGGQQ*PGVLTVAHDLHLDV Trigger: CACATCCAAATGAAGGTCATGGGCTACAGTGAGGACCCCAGGCCACTGCTGGCCCCCGAGCTGAAGACAGGAGCCAGCAGTGTCAGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTGAGACAGGAGCAGGGACACCTGGTCTGTGACCTATCAGCAGAGAGGTGGGGACAAGATGCCTaGGAAGTCAGAGTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PWLRQEQGHLVCDLSAERWGQDA*EVRVCW Trigger: CCAGCAGACTCTGACTTCCAAGGCATCTTGTCCCCA...CCTCTCTGCTGATAGGTCACAGACCAGGTGTCCCTGCTCCTGTCTCAGCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS-3UTR CAA 90 bp | AGCCCTTTACAGGGTCAGGGACCAATGACTGTTTTCCAAGCTGAGCCTGGCACAGCAGGCTCAGGGCCTTaGGGGACAAGATGCCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SPLQGQGPMTVFQAEPGTAGSGP*GTRCLG Trigger: TCCAAGGCATCTTGTCCCCAAAGGCCCTGAGCCTGC...TGTGCCAGGCTCAGCTTGGAAAACAGTCATTGGTCCCTGACCCTGTAAAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 90 bp | GTCCTCACTGTAGCCCATGACCTTCATTTGGATGTGAGTGAAGTCTaGGAGGCTCTGGTCATAGGCGGCTTCTTCCCACAGCCTGACGTA | + |
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Preference number: 5 (lower is better) Translates to: VLTVAHDLHLDVSEV*EALVIGGFFPQPDV Trigger: TACGTCAGGCTGTGGGAAGAAGCCGCCTATGACCAGAGCCTCCCAGACTTCACTCACATCCAAATGAAGGTCATGGGCTACAGTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 90 bp | CAGGCTCAGGGCCTTTGGGGACAAGATGCCTTGGAAGTCAGAGTCTaGTGGCACAAAGGTGATCTTAGGATAGCATTGGCACATGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QAQGLWGQDALEVRV*WHKGDLRIALAHAP Trigger: TGGAGCATGTGCCAATGCTATCCTAAGATCACCTTTGTGCCAGCAGACTCTGACTTCCAAGGCATCTTGTCCCCAAAGGCCCTGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CAA 90 bp | GGACCCCTGCTGGCCCAGGGCACCTGCCGGTGTGGCTCATCCCTGTaGGGGGATGGTTGCAGGCTGCTGCCTTCGCTGGAGCCCACGTCC | + |
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Preference number: 6 (lower is better) Translates to: GPLLAQGTCRCGSSL*GDGCRLLPSLEPTS Trigger: GGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCCTGGGCCAGCAGGGGTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CAA 90 bp | GGCCCAGGGCACCTGCCGGTGTGGCTCATCCCTGTTGGGGGATGGTaGCAGGCTGCTGCCTTCGCTGGAGCCCACGTCCAGGTCGTCATG | + |
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Preference number: 6 (lower is better) Translates to: GPGHLPVWLIPVGGW*QAAAFAGAHVQVVM Trigger: CATGACGACCTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCCTGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | GGGCACCTGCCGGTGTGGCTCATCCCTGTTGGGGGATaGTTGCAGGCTGCTGCCTTCGCTGGAGCCCACGTC | + |
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Preference number: 6 (lower is better) Translates to: GHLPVWLIPVGG*LQAAAFAGAHV Trigger: GACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | CAGTGGACCCCTGCTGGCCCAGGGCACCTGCCGGTGTaGCTCATCCCTGTTGGGGGATGGTTGCAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QWTPAGPGHLPV*LIPVGGWLQAA Trigger: AGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTGCCCTGGGCCAGCAGGGGTCCACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 72 bp | ACCTGCCGGTGTGGCTCATCCCTGTTGGGGGATGGTTaGAGGCTGCTGCCTTCGCTGGAGCCCACGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TCRCGSSLLGDG*RLLPSLEPTSR Trigger: CCTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CAA 72 bp | CACCTGCCGGTGTGGCTCATCCCTGTTGGGGGATGGTaGCAGGCTGCTGCCTTCGCTGGAGCCCACGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HLPVWLIPVGGW*QAAAFAGAHVQ Trigger: CTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGGATGAGCCACACCGGCAGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS TCA 72 bp | CCATCCAGGCCTGAGCAGTACGAGGCTCGCCTTCCCTaGCACTGCTGGCTCCTGTCTTCAGCTCGGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSRPEQYEARLP*HCWLLSSARGP Trigger: TGGCCCCCGAGCTGAAGACAGGAGCCAGCAGTGTCAGGGAAGGCGAGCCTCGTACTGCTCAGGCCTGGATGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS TCA 72 bp | CCTCTATGGACGACCACCGGAGCCTCCATCCAGGCCTaGGCAGTACGAGGCTCGCCTTCCCTGACACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PLWTTTGASIQA*AVRGSPSLTLL Trigger: CAGCAGTGTCAGGGAAGGCGAGCCTCGTACTGCTCAGGCCTGGATGGAGGCTCCGGTGGTCGTCCATAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 72 bp | CATTGCTGCTTTCTGGGTAGCGCTGCCTCCCGTGCCTaGCCGTCCAGGACCGTGTCCTCAGATGTAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: HCCFLGSAASRA*PSRTVSSDVGV Trigger: CACCCCTACATCTGAGGACACGGTCCTGGACGGGCAGGCACGGGAGGCAGCGCTACCCAGAAAGCAGCAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 72 bp | GCCTGGACAGTCTCCCCCTTCATCCTCAGGGACCATTaGTGCTTTCTGGGTAGCGCTGCCTCCCGTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AWTVSPFILRDH*CFLGSAASRAC Trigger: GCAGGCACGGGAGGCAGCGCTACCCAGAAAGCAGCAATGGTCCCTGAGGATGAAGGGGGAGACTGTCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | CCCTGTTGGGGGATGGTTGCAGGCTGCTGCCTTCGCTaGAGCCCACGTCCAGGTCGTCATGGAATGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PCWGMVAGCCLR*SPRPGRHGMRP Trigger: TGGCCTCATTCCATGACGACCTGGACGTGGGCTCCAGCGAAGGCAGCAGCCTGCAACCATCCCCCAACAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | TCTCCCCCTTCATCCTCAGGGACCATTGCTGCTTTCTaGGTAGCGCTGCCTCCCGTGCCTGCCCGTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPPSSSGTIAAF*VALPPVPARPG Trigger: TCCTGGACGGGCAGGCACGGGAGGCAGCGCTACCCAGAAAGCAGCAATGGTCCCTGAGGATGAAGGGGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | GTCGTCAATCAGAGCAAAGTCACTGAAGCGATCCAGTaGACCCCTGCTGGCCCAGGGCACCTGCCGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VVNQSKVTEAIQ*TPAGPGHLPVW Trigger: CCACACCGGCAGGTGCCCTGGGCCAGCAGGGGTCCACTGGATCGCTTCAGTGACTTTGCTCTGATTGACGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | TCTTCCTCCTCCTGCTCCGGTTCTTCTGCGCGTGCCTaGACAGTCTCCCCCTTCATCCTCAGGGACCATTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSSCSGSSARA*TVSPFILRDHC Trigger: GCAATGGTCCCTGAGGATGAAGGGGGAGACTGTCCAGGCACGCGCAGAAGAACCGGAGCAGGAGGAGGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CAA 72 bp | CCTCCGAAAGCCCGGTCTCCAGCAGGCTCAGGGCCTTaGGGGACAAGATGCCTTGGAAGTCAGAGTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PPKARSPAGSGP*GTRCLGSQSLL Trigger: CAGCAGACTCTGACTTCCAAGGCATCTTGTCCCCAAAGGCCCTGAGCCTGCTGGAGACCGGGCTTTCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CAA 90 bp | GGCTCTTTACCTCCGAAAGCCCGGTCTCCAGCAGGCTCAGGGCCTTaGGGGACAAGATGCCTTGGAAGTCAGAGTCTGCTGGCACAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSLPPKARSPAGSGP*GTRCLGSQSLLAQR Trigger: CCTTTGTGCCAGCAGACTCTGACTTCCAAGGCATCTTGTCCCCAAAGGCCCTGAGCCTGCTGGAGACCGGGCTTTCGGAGGTAAAGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS TCA 72 bp | GGTGCAGAGCCTTGGGGACCCACTGAAGGGCTGCTCTaGGAATGGGATTTCTCTCCCTCGTTCTCATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GAEPWGPTEGLL*EWDFSPSFSSD Trigger: GTCAGATGAGAACGAGGGAGAGAAATCCCATTCTCAGAGCAGCCCTTCAGTGGGTCCCCAAGGCTCTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS GCA 72 bp | CCAAGGGTGCAGAGCCTTGGGGACCCACTGAAGGGCTaGTCTGAGAATGGGATTTCTCTCCCTCGTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PRVQSLGDPLKG*SENGISLPRSH Trigger: ATGAGAACGAGGGAGAGAAATCCCATTCTCAGAGCAGCCCTTCAGTGGGTCCCCAAGGCTCTGCACCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CAA 90 bp | AAGCCCGGTCTCCAGCAGGCTCAGGGCCTTTGGGGACAAGATGCCTaGGAAGTCAGAGTCTGCTGGCACAAAGGTGATCTTAGGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: KPGLQQAQGLWGQDA*EVRVCWHKGDLRIA Trigger: TGCTATCCTAAGATCACCTTTGTGCCAGCAGACTCTGACTTCCAAGGCATCTTGTCCCCAAAGGCCCTGAGCCTGCTGGAGACCGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS TCA 72 bp | GCTCTGAGAATGGGATTTCTCTCCCTCGTTCTCATCTaGCCCTCTATGGACGACCACCGGAGCCTCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: ALRMGFLSLVLI*PSMDDHRSLHP Trigger: TGGATGGAGGCTCCGGTGGTCGTCCATAGAGGGTCAGATGAGAACGAGGGAGAGAAATCCCATTCTCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CAA 72 bp | CTCCAGCAGGCTCAGGGCCTTTGGGGACAAGATGCCTaGGAAGTCAGAGTCTGCTGGCACAAAGGTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: LQQAQGLWGQDA*EVRVCWHKGDL Trigger: AAGATCACCTTTGTGCCAGCAGACTCTGACTTCCAAGGCATCTTGTCCCCAAAGGCCCTGAGCCTGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | GTAGCCCATGACCTTCATTTGGATGTGAGTGAAGTCTaGGAGGCTCTGGTCATAGGCGGCTTCTTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: VAHDLHLDVSEV*EALVIGGFFPQ Trigger: CTGTGGGAAGAAGCCGCCTATGACCAGAGCCTCCCAGACTTCACTCACATCCAAATGAAGGTCATGGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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| CDS CCA 72 bp | CTTTGGGGACAAGATGCCTTGGAAGTCAGAGTCTGCTaGCACAAAGGTGATCTTAGGATAGCATTGGCACAT | + |
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Preference number: 6 (lower is better) Translates to: LWGQDALEVRVC*HKGDLRIALAH Trigger: ATGTGCCAATGCTATCCTAAGATCACCTTTGTGCCAGCAGACTCTGACTTCCAAGGCATCTTGTCCCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054472.4 |
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