RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BSN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032589

Ensembl transcript IDs: ENSMUST00000035208.14, ENSMUST00000124763.2

Found 1310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTaGCGAGGGCAAGGCCTTATGGCCACACAGGGATCCGGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: AGHVDVCSSVTPRAG*RGQGLMATQGSGPA
Trigger: AGCTGGCCCGGATCCCTGTGTGGCCATAAGGCCTTGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp GGGCAAGGCCTTATGGCCACACAGGGATCCGGGCCAGCTGGAATGTaGAGGAATCGGAGCCCAGGGCCCCAGCCCTCAGTCAAAGCCCCT +
Preference number: 1 (lower is better)
Translates to: GQGLMATQGSGPAGM*RNRSPGPQPSVKAP
Trigger: AGGGGCTTTGACTGAGGGCTGGGGCCCTGGGCTCCGATTCCTTCACATTCCAGCTGGCCCGGATCCCTGTGTGGCCATAAGGCCTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp GTGACGAGGGCAAGGCCTTATGGCCACACAGGGATCCGGGCCAGCTaGAATGTGAAGGAATCGGAGCCCAGGGCCCCAGCCCTCAGTCAA +
Preference number: 1 (lower is better)
Translates to: VTRARPYGHTGIRAS*NVKESEPRAPALSQ
Trigger: TTGACTGAGGGCTGGGGCCCTGGGCTCCGATTCCTTCACATTCCAGCTGGCCCGGATCCCTGTGTGGCCATAAGGCCTTGCCCTCGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp CGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGCTaGGTTTCGGTGCTATGGCCTCTTGTTTCAGCGATGAGACAGTGT +
Preference number: 1 (lower is better)
Translates to: RCHPRAGRSLSRCPR*VSVLWPLVSAMRQC
Trigger: ACACTGTCTCATCGCTGAAACAAGAGGCCATAGCACCGAAACGCAGCGTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp GCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAAGGCCTTATaGCCACACAGGGATCCGGGCCAGCTGGAATGTGAAGGAATCGGA +
Preference number: 1 (lower is better)
Translates to: APVSPPEQGDEGKAL*PHRDPGQLECEGIG
Trigger: TCCGATTCCTTCACATTCCAGCTGGCCCGGATCCCTGTGTGGCCATAAGGCCTTGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp CTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTaGCAAGCAGCGAGTCCTGCCACAGGTCAAACATGCCACAGACTT +
Preference number: 1 (lower is better)
Translates to: LRAVHAPVPDRRRLT*QAASPATGQTCHRL
Trigger: AAGTCTGTGGCATGTTTGACCTGTGGCAGGACTCGCTGCTTGCCAGGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp GGCTGGTCGAGACAATGGCGGTGCTGCTGGGGTGCTCACAATGGCTaGGGGGATGGCTTTAAGGTGATGGCAGGCATGCCTAGTTACGCT +
Preference number: 1 (lower is better)
Translates to: GWSRQWRCCWGAHNG*GDGFKVMAGMPSYA
Trigger: AGCGTAACTAGGCATGCCTGCCATCACCTTAAAGCCATCCCCCCAGCCATTGTGAGCACCCCAGCAGCACCGCCATTGTCTCGACCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp GGGGCCTCACTGCCTGCTCCCTGGCCTGGCAAATGTAGGCAGTTCTaGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTC +
Preference number: 1 (lower is better)
Translates to: GASLPAPWPGKCRQF*QVFTSVSQSQGEAL
Trigger: GAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTGCCTACATTTGCCAGGCCAGGGAGCAGGCAGTGAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp CAAAAGAAATCCTCAGGTGTAGAGATGAGGAGCCGAGGAGCCGGCTaGTCGAGACAATGGCGGTGCTGCTGGGGTGCTCACAATGGCTGG +
Preference number: 1 (lower is better)
Translates to: QKKSSGVEMRSRGAG*SRQWRCCWGAHNGW
Trigger: CCAGCCATTGTGAGCACCCCAGCAGCACCGCCATTGTCTCGACCAGCCGGCTCCTCGGCTCCTCATCTCTACACCTGAGGATTTCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp ATGAATGAAATCGTGCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTaGCAGACAGGCGGCGACTCACCTGGCAAGCAGCGAGTCCTGCCA +
Preference number: 1 (lower is better)
Translates to: MNEIVQRSFEPCMLQ*QTGGDSPGKQRVLP
Trigger: TGGCAGGACTCGCTGCTTGCCAGGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGCACGATTTCATTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp ACTTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTaGTGGCACCCAGGGAGACAGAGATGGCATCTCCAGAGAGTTTCA +
Preference number: 1 (lower is better)
Translates to: TSMALQCHPVHMVAG*WHPGRQRWHLQRVS
Trigger: TGAAACTCTCTGGAGATGCCATCTCTGTCTCCCTGGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp TGCTGTGAGAACACATGTCATTCTCATGCTTGGTTGAGGCCTGCCTaGTGGGGCCCGCCTGCTGGGAATCTTTGGGCCAAAGGTTTGCCA +
Preference number: 1 (lower is better)
Translates to: CCENTCHSHAWLRPA*WGPPAGNLWAKGLP
Trigger: TGGCAAACCTTTGGCCCAAAGATTCCCAGCAGGCGGGCCCCAGCAGGCAGGCCTCAACCAAGCATGAGAATGACATGTGTTCTCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp TGTGAGAACACATGTCATTCTCATGCTTGGTTGAGGCCTGCCTGCTaGGGCCCGCCTGCTGGGAATCTTTGGGCCAAAGGTTTGCCAGCT +
Preference number: 1 (lower is better)
Translates to: CENTCHSHAWLRPAC*GPPAGNLWAKGLPA
Trigger: AGCTGGCAAACCTTTGGCCCAAAGATTCCCAGCAGGCGGGCCCCAGCAGGCAGGCCTCAACCAAGCATGAGAATGACATGTGTTCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp TCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTaGCTCTCCACAGATGTGCCCCAAGCTTTGCCCTTGAGCAGTACC +
Preference number: 1 (lower is better)
Translates to: SRSGNHRAQPGSLGF*LSTDVPQALPLSST
Trigger: GGTACTGCTCAAGGGCAAAGCTTGGGGCACATCTGTGGAGAGGCAGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp GGAGAAGGGCTATTGGGCAGGACTGTACTCTCACGGACAAGGACCTaGCTGGAAAACTCCCCAGAGGCTCCAGCATACAGACCAGAATTG +
Preference number: 1 (lower is better)
Translates to: GEGLLGRTVLSRTRT*LENSPEAPAYRPEL
Trigger: CAATTCTGGTCTGTATGCTGGAGCCTCTGGGGAGTTTTCCAGGCAGGTCCTTGTCCGTGAGAGTACAGTCCTGCCCAATAGCCCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp AAGGGCTATTGGGCAGGACTGTACTCTCACGGACAAGGACCTGCCTaGAAAACTCCCCAGAGGCTCCAGCATACAGACCAGAATTGCTGC +
Preference number: 1 (lower is better)
Translates to: KGYWAGLYSHGQGPA*KTPQRLQHTDQNCC
Trigger: GCAGCAATTCTGGTCTGTATGCTGGAGCCTCTGGGGAGTTTTCCAGGCAGGTCCTTGTCCGTGAGAGTACAGTCCTGCCCAATAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp AATGGTCCCATTGGTCCGGCAGATGCTTCACCTAGGTCGCTGCTGTaGGAACACATGTCATTCTCATGCTTGGTTGAGGCCTGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: NGPIGPADASPRSLL*EHMSFSCLVEACLL
Trigger: CAGCAGGCAGGCCTCAACCAAGCATGAGAATGACATGTGTTCTCACAGCAGCGACCTAGGTGAAGCATCTGCCGGACCAATGGGACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp AAGCCAATGGTCCCATTGGTCCGGCAGATGCTTCACCTAGGTCGCTaGTGTGAGAACACATGTCATTCTCATGCTTGGTTGAGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: KPMVPLVRQMLHLGR*CENTCHSHAWLRPA
Trigger: GGCAGGCCTCAACCAAGCATGAGAATGACATGTGTTCTCACAGCAGCGACCTAGGTGAAGCATCTGCCGGACCAATGGGACCATTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp ATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTaGCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCAGGGAGA +
Preference number: 1 (lower is better)
Translates to: MCLHIQYLMTSMALQ*HPVHMVAGCWHPGR
Trigger: TCTCCCTGGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp TGCTATTGTACACAGATAAAAACTGCAAGGTGTCTGGGGCCTCACTaGCTGCTCCCTGGCCTGGCAAATGTAGGCAGTTCTGGCAGGTCT +
Preference number: 1 (lower is better)
Translates to: CYCTQIKTARCLGPH*LLPGLANVGSSGRS
Trigger: AGACCTGCCAGAACTGCCTACATTTGCCAGGCCAGGGAGCAGGCAGTGAGGCCCCAGACACCTTGCAGTTTTTATCTGTGTACAATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp TCTGAGAGGAAAGGAATACAGTCATGGTCCCAGGTATCTAGACCCTaGGCACATCCTGTACACACCTGGGCCTGGGAGTTCCTCAAAGAG +
Preference number: 1 (lower is better)
Translates to: SERKGIQSWSQVSRP*AHPVHTWAWEFLKE
Trigger: CTCTTTGAGGAACTCCCAGGCCCAGGTGTGTACAGGATGTGCCCAGGGTCTAGATACCTGGGACCATGACTGTATTCCTTTCCTCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp GGTGCCCACGCTGCGTTTCGGTGCTATGGCCTCTTGTTTCAGCGATaGGACAGTGTTAGGGTCCTAATGTTTGTAAAGTTCTCCCAAACC +
Preference number: 1 (lower is better)
Translates to: GAHAAFRCYGLLFQR*DSVRVLMFVKFSQT
Trigger: GGTTTGGGAGAACTTTACAAACATTAGGACCCTAACACTGTCTCATCGCTGAAACAAGAGGCCATAGCACCGAAACGCAGCGTGGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp TCTGATACCACAGAAATACCTTGTCACAGTACAGGGGAGGGACACTaGAGTACCACGAGTTCTCACAGAGCACAGGAGGACGGCACACAA +
Preference number: 1 (lower is better)
Translates to: SDTTEIPCHSTGEGH*STTSSHRAQEDGTQ
Trigger: TTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACTCGTGGTACTTCAGTGTCCCTCCCCTGTACTGTGACAAGGTATTTCTGTGGTATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp AGAGCTGCGCCCAGGCCTTTGACTCCAGAGATTTTTCCACAGCAATaGGATTGTCTTTCTTCAGGTCTTCAGGAGCCCTTCTGGACACAA +
Preference number: 1 (lower is better)
Translates to: RAAPRPLTPEIFPQQ*DCLSSGLQEPFWTQ
Trigger: TTGTGTCCAGAAGGGCTCCTGAAGACCTGAAGAAAGACAATCTCATTGCTGTGGAAAAATCTCTGGAGTCAAAGGCCTGGGCGCAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp AGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATaGGACTCGTGCACACACGCACAAACACACACACACACTCACACA +
Preference number: 1 (lower is better)
Translates to: RVPHLRGIDLTPEAE*DSCTHAQTHTHTHT
Trigger: TGTGTGAGTGTGTGTGTGTGTTTGTGCGTGTGTGCACGAGTCTCATTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp AAAGGTTTGCCAGCTTGTAGATGCGTTATACGCAGAGTCCAGAGCTaGGCCCAGGCCTTTGACTCCAGAGATTTTTCCACAGCAATGAGA +
Preference number: 1 (lower is better)
Translates to: KGLPACRCVIRRVQS*AQAFDSRDFSTAMR
Trigger: TCTCATTGCTGTGGAAAAATCTCTGGAGTCAAAGGCCTGGGCGCAGCTCTGGACTCTGCGTATAACGCATCTACAAGCTGGCAAACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 90 bp AGAGTCAACATAAGGGCCAGGGATACCTATGGCCTAGAAGACTCCTaGAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACA +
Preference number: 1 (lower is better)
Translates to: RVNIRARDTYGLEDS*SHIHRRAKICPVGT
Trigger: TGTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAGGCCATAGGTATCCCTGGCCCTTATGTTGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 90 bp GTCCATGATGACACATTATTTACAGCAAGGGAGGAGAAGGGCTATTaGGCAGGACTGTACTCTCACGGACAAGGACCTGCCTGGAAAACT +
Preference number: 1 (lower is better)
Translates to: VHDDTLFTAREEKGY*AGLYSHGQGPAWKT
Trigger: AGTTTTCCAGGCAGGTCCTTGTCCGTGAGAGTACAGTCCTGCCCAATAGCCCTTCTCCTCCCTTGCTGTAAATAATGTGTCATCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp CTGAATGATATTTTCAGCCATAGCCAGCTCCTTCTGGGTACCTTATaGCCCCTGGCTCCACTCCAGATAGATCTCTTGGCTCACAATCCT +
Preference number: 1 (lower is better)
Translates to: LNDIFSHSQLLLGTL*PLAPLQIDLLAHNP
Trigger: AGGATTGTGAGCCAAGAGATCTATCTGGAGTGGAGCCAGGGGTCATAAGGTACCCAGAAGGAGCTGGCTATGGCTGAAAATATCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp TCTCTCTCACACACACAGAATGTGGGGACAAGGATTGGGTTGGGGTaGTGGTATGAGCAGATAGAGCTATCCAGTTTCTCAACTGCATGT +
Preference number: 1 (lower is better)
Translates to: SLSHTQNVGTRIGLG*WYEQIELSSFSTAC
Trigger: ACATGCAGTTGAGAAACTGGATAGCTCTATCTGCTCATACCATCACCCCAACCCAATCCTTGTCCCCACATTCTGTGTGTGTGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 90 bp ACACACACAGAATGTGGGGACAAGGATTGGGTTGGGGTGATGGTATaGGCAGATAGAGCTATCCAGTTTCTCAACTGCATGTTTGCAATT +
Preference number: 1 (lower is better)
Translates to: THTECGDKDWVGVMV*ADRAIQFLNCMFAI
Trigger: AATTGCAAACATGCAGTTGAGAAACTGGATAGCTCTATCTGCTCATACCATCACCCCAACCCAATCCTTGTCCCCACATTCTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGGGCCAGCTGGAATGTaGAGGAATCGGAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHGPAGM*RNRSPG
Trigger: CCCTGGGCTCCGATTCCTTCACATTCCAGCTGGCCC...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACATTCTCATGCTTGGTTaGGGCCTGCCTGCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHILMLG*GLPAGA
Trigger: GGCCCCAGCAGGCAGGCCTCAACCAAGCATGAGAAT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACAAGGACGGCTGGCCTaGGTAAGGCAGGGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAQGRLA*VRQGLL
Trigger: CAAGAGACCCTGCCTTACTCAGGCCAGCCGTCCTTG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCAGCCGGTGCCCACGCTaGGTTTCGGTGCTATGGCCT +
Preference number: 2 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTSRCPR*VSVLWP
Trigger: AGGCCATAGCACCGAAACGCAGCGTGGGCACCGGCT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAAACGCATTGGAAGCCTaGTGGCCAGGCCACAGGAGG +
Preference number: 2 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRANALEA*WPGHRR
Trigger: CCTCCTGTGGCCTGGCCACCAGGCTTCCAATGCGTT...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCAACGCATTGGAAGCCTaGTGGCCAGGCCACAGGAGG +
Preference number: 2 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPNALEA*WPGHRR
Trigger: CCTCCTGTGGCCTGGCCACCAGGCTTCCAATGCGTT...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGGCTGGGCCCGAGATaGAGGGAGGCCTCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTWLGPR*REASQG
Trigger: TCCCTGGGAGGCCTCCCTTCATCTCGGGCCCAGCCA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCTCGCCCTGGGTTTGTaGTCTTGGTGGCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPLALGL*SWWPAA
Trigger: GGCAGCAGGCCACCAAGAGCACAAACCCAGGGCGAG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCTGGGTTTGTGCTCTTaGTGGCCTGCTGCCCGCTAT +
Preference number: 2 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPLGLCS*WPAARY
Trigger: ATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 90 bp GGCGGGCTGAGGAGCCTCCCTAGACCTCGCCCTGGGTTTGTGCTCTaGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: GGLRSLPRPRPGFVL*VACCPLLLLNQRFS
Trigger: GGAGAAACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGGGCGAGGTCTAGGGAGGCTCCTCAGCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACCTGCTGGGAATCTTTaGGCCAAAGGTTTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAPAGNL*AKGLPA
Trigger: AGCTGGCAAACCTTTGGCCCAAAGATTCCCAGCAGG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCCTGCCATCCACGGGCTaGGAGAAGCCTCAGCCGGTG +
Preference number: 2 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTLPSTG*EKPQPV
Trigger: CACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAG...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTCTGAAGCTCTCCCTTaGCTCCTCTGCTCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTSEALP*LLCSEH
Trigger: GTGCTCAGAGCAGAGGAGCCAAGGGAGAGCTTCAGA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATGGCTGGGCCCGAGATaGAGGGAGGCCTCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGWLGPR*REASQG
Trigger: TCCCTGGGAGGCCTCCCTTCATCTCGGGCCCAGCCA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCGCAGAGTCCAGAGCTaGGCCCAGGCCTTTGACTCC +
Preference number: 2 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLRRVQS*AQAFDS
Trigger: GGAGTCAAAGGCCTGGGCGCAGCTCTGGACTCTGCG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCCTGCTGGGGCCCGCCTaGTGGGAATCTTTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGLLGPA*WESLGQ
Trigger: TTGGCCCAAAGATTCCCAGCAGGCGGGCCCCAGCAG...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCACGCTGCGTTTCGGTaGTATGGCCTCTTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPHAAFR*YGLLFQ
Trigger: CTGAAACAAGAGGCCATAGCACCGAAACGCAGCGTG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCAGAAGCCTCAGCCGGTaGCCACGCTGCGTTTCGGTG +
Preference number: 2 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGRSLSR*PRCVSV
Trigger: CACCGAAACGCAGCGTGGGCACCGGCTGAGGCTTCT...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGCGTTTCGGTGCTATaGCCTCTTGTTTCAGCGATG +
Preference number: 2 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHCVSVL*PLVSAM
Trigger: CATCGCTGAAACAAGAGGCCATAGCACCGAAACGCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGATGAGACTTGTGGCTaGGCCCGAGATGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPDETCG*ARDEGR
Trigger: CCTCCCTTCATCTCGGGCCCAGCCACAAGTCTCATC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGGGCCAGCTGGAATGTaGAGGAATCGGAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLGPAGM*RNRSPG
Trigger: CCCTGGGCTCCGATTCCTTCACATTCCAGCTGGCCC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCACATGTCATTCTCATaGTTGGTTGAGGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPHMSFS*LVEACL
Trigger: CAGGCAGGCCTCAACCAAGCATGAGAATGACATGTG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGACCCGTGGACACCCTaGCTGCCCTCATCCCCTAGT +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWDPWTP*LPSSPS
Trigger: ACTAGGGGATGAGGGCAGGCAGGGTGTCCACGGGTC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCACAGCCAGGATCCCTTaGCTTCTGCCTCTCCACAGA +
Preference number: 2 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPTARIP*LLPLHR
Trigger: TCTGTGGAGAGGCAGAAGCCAAGGGATCCTGGCTGT...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAACCCCCAGAGCAGGGTaGCGAGGGCAAGGCCTTATG +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGTPRAG*RGQGLM
Trigger: CATAAGGCCTTGCCCTCGTCACCCTGCTCTGGGGGT...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTGGGGCCTCACTGCCTaGTCCCTGGCCTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASWGLTA*SLAWQM
Trigger: CATTTGCCAGGCCAGGGAGCAGGCAGTGAGGCCCCA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTACAATGGCGGTGCTGCTaGGGTGCTCACAATGGCTGG +
Preference number: 2 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLQWRCC*GAHNGW
Trigger: CCAGCCATTGTGAGCACCCCAGCAGCACCGCCATTG...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGGCTGGTCGAGACAATaGCGGTGCTGCTGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGGWSRQ*RCCWGA
Trigger: AGCACCCCAGCAGCACCGCCATTGTCTCGACCAGCC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAAGCCGAGGAGCCGGCTaGTCGAGACAATGGCGGTGC +
Preference number: 2 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAESRGAG*SRQWRC
Trigger: GCACCGCCATTGTCTCGACCAGCCGGCTCCTCGGCT...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCCTGGGTTTGTGCTCTTaGTGGCCTGCTGCCCGCTAT +
Preference number: 2 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGLGLCS*WPAARY
Trigger: ATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAG...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCAGGCGGCGACTCACCTaGCAAGCAGCGAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRRRLT*QAASPA
Trigger: GGCAGGACTCGCTGCTTGCCAGGTGAGTCGCCGCCT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACACCCCCAGAGCAGGGTaGCGAGGGCAAGGCCTTATG +
Preference number: 2 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHTPRAG*RGQGLM
Trigger: CATAAGGCCTTGCCCTCGTCACCCTGCTCTGGGGGT...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTTGGCTCCTCTGCTCTaGGCACACCCACTGCTGATG +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWLAPLL*AHPLLM
Trigger: CATCAGCAGTGGGTGTGCTCAGAGCAGAGGAGCCAA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTACCTCACAGGTCTCTaGAGCTCTCCCTTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTYLTGL*SSPLAP
Trigger: AGGAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTACCTCACAGGTCTCTaGAGCTCTCCCTTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGYLTGL*SSPLAP
Trigger: AGGAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCGCAGAGTCCAGAGCTaGGCCCAGGCCTTTGACTCC +
Preference number: 2 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHRRVQS*AQAFDS
Trigger: GGAGTCAAAGGCCTGGGCGCAGCTCTGGACTCTGCG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACAGAAGCCTCAGCCGGTaGCCACGCTGCGTTTCGGTG +
Preference number: 2 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHRSLSR*PRCVSV
Trigger: CACCGAAACGCAGCGTGGGCACCGGCTGAGGCTTCT...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCTCGAGACAATGGCGGTaGTGCTGGGGTGCTCACAAT +
Preference number: 2 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLSRQWR*CWGAHN
Trigger: ATTGTGAGCACCCCAGCAGCACCGCCATTGTCTCGA...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTCGAGACAATGGCGGTaGTGCTGGGGTGCTCACAAT +
Preference number: 2 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTSRQWR*CWGAHN
Trigger: ATTGTGAGCACCCCAGCAGCACCGCCATTGTCTCGA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCATGGGGCCTCACTGCCTaGTCCCTGGCCTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAWGLTA*SLAWQM
Trigger: CATTTGCCAGGCCAGGGAGCAGGCAGTGAGGCCCCA...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAGCATTGGAAGCCTGGTaGCCAGGCCACAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAALEAW*PGHRRL
Trigger: CAGCCTCCTGTGGCCTGGCCACCAGGCTTCCAATGC...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGAGGGCAAGGCCTTATaGCCACACAGGGATCCGGGC +
Preference number: 2 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHEGKAL*PHRDPG
Trigger: GCCCGGATCCCTGTGTGGCCATAAGGCCTTGCCCTC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGGTGCTCACAATGGCTaGGGGGATGGCTTTAAGGTG +
Preference number: 2 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGGAHNG*GDGFKV
Trigger: CACCTTAAAGCCATCCCCCCAGCCATTGTGAGCACC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGGACAAGGATTGGGTTaGGGTGATGGTATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPGQGLG*GDGMSR
Trigger: TCTGCTCATACCATCACCCCAACCCAATCCTTGTCC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGTACACACCTGGGCCTaGGAGTTCCTCAAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWVHTWA*EFLKEG
Trigger: GCCCTCTTTGAGGAACTCCCAGGCCCAGGTGTGTAC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 90 bp GGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCCATaGGTCCGGCAGATGCTTCACCTAGGTCGCTGCTGTGAGAACACA +
Preference number: 2 (lower is better)
Translates to: GSLERHERSPKPMVP*VRQMLHLGRCCENT
Trigger: TGTGTTCTCACAGCAGCGACCTAGGTGAAGCATCTGCCGGACCAATGGGACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAATTCTCATGCTTGGTTaGGGCCTGCCTGCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAILMLG*GLPAGA
Trigger: GGCCCCAGCAGGCAGGCCTCAACCAAGCATGAGAAT...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATTGGCTCCTCTGCTCTaGGCACACCCACTGCTGATG +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGLAPLL*AHPLLM
Trigger: CATCAGCAGTGGGTGTGCTCAGAGCAGAGGAGCCAA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATTTCAGTGTGGGCCCTaGGACTGTTCACCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGFQCGP*DCSPCP
Trigger: TGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAAA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGCCATGTGGACGTCTaGTCCAGTGTCACCCCCAGA +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGHVDV*SSVTPR
Trigger: TCTGGGGGTGACACTGGAGCAGACGTCCACATGGCC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGTTCTCCCAAACCCATaGTGGCCATGTGGACGTCTG +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWVLPNP*WPCGRL
Trigger: CAGACGTCCACATGGCCAGCATGGGTTTGGGAGAAC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCTGTCATTCTCATGCTTaGTTGAGGCCTGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLCHSHA*LRPACW
Trigger: CCAGCAGGCAGGCCTCAACCAAGCATGAGAATGACA...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAGCCAATGGTCCCATTaGTCCGGCAGATGCTTCACC +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSQWSH*SGRCFT
Trigger: GGTGAAGCATCTGCCGGACCAATGGGACCATTGGCT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGTACACACCTGGGCCTaGGAGTTCCTCAAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGVHTWA*EFLKEG
Trigger: GCCCTCTTTGAGGAACTCCCAGGCCCAGGTGTGTAC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGTTGGGGTGATGGTATaGGCAGATAGAGCTATCCAG +
Preference number: 2 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGVGVMV*ADRAIQ
Trigger: CTGGATAGCTCTATCTGCTCATACCATCACCCCAAC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCAGGATTGGGTTGGGGTaGTGGTATGAGCAGATAGAG +
Preference number: 2 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTRIGLG*WYEQIE
Trigger: CTCTATCTGCTCATACCATCACCCCAACCCAATCCT...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGTGCTCTTGGTGGCCTaGTGCCCGCTATTGCTTCTA +
Preference number: 2 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASVLLVA*CPLLLL
Trigger: TAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCAC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGGATCCCTTGGCTTCTaGCTCTCCACAGATGTGCCC +
Preference number: 2 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEGSLGF*LSTDVP
Trigger: GGGCACATCTGTGGAGAGGCAGAAGCCAAGGGATCC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTATGTCATTCTCATGCTTaGTTGAGGCCTGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLCHSHA*LRPACW
Trigger: CCAGCAGGCAGGCCTCAACCAAGCATGAGAATGACA...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGACTGTGTATAACGCATTaGAAGCCTGGTGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGLCITH*KPGGQA
Trigger: GGCCTGGCCACCAGGCTTCCAATGCGTTATACACAG...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGGGATCCGGGCCAGCTaGAATGTGAAGGAATCGGAG +
Preference number: 2 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHGIRAS*NVKESE
Trigger: CTCCGATTCCTTCACATTCCAGCTGGCCCGGATCCC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGGATCCGGGCCAGCTaGAATGTGAAGGAATCGGAG +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGIRAS*NVKESE
Trigger: CTCCGATTCCTTCACATTCCAGCTGGCCCGGATCCC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGGTGCTCACAATGGCTaGGGGGATGGCTTTAAGGTG +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGGAHNG*GDGFKV
Trigger: CACCTTAAAGCCATCCCCCCAGCCATTGTGAGCACC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCTTTTGGCTCAGGCCTaGGATAGGAGGAAAAATGAT +
Preference number: 2 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPLLAQA*DRRKND
Trigger: ATCATTTTTCCTCCTATCCCAGGCCTGAGCCAAAAG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCAGAGGAGGCAAGTCCTaGGGCAGATGTGGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRGGKS*GRCGEG
Trigger: ACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTCACATGTCATTCTCATaGTTGGTTGAGGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRHMSFS*LVEACL
Trigger: CAGGCAGGCCTCAACCAAGCATGAGAATGACATGTG...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGTTCTCCCAAACCCATaGTGGCCATGTGGACGTCTG +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGVLPNP*WPCGRL
Trigger: CAGACGTCCACATGGCCAGCATGGGTTTGGGAGAAC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCTCTTGGTGGCCTGCTaGCCGCTATTGCTTCTAAAT +
Preference number: 2 (lower is better)
Translates to: KPTECPYTCILCGLPSLSLLVAC*PLLLLN
Trigger: ATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGCAAGCAGCGAGTCCTaGCACAGGTCAAACATGCCA +
Preference number: 2 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHASSES*HRSNMP
Trigger: TGGCATGTTTGACCTGTGGCAGGACTCGCTGCTTGC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGAATGTCCATACACATaGATCCTGTGCGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGECPYT*ILCGLP
Trigger: GGGGAGCCCGCACAGGATGCATGTGTATGGACATTC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGACCTGCTGGGAATCTTTaGGCCAAAGGTTTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGPAGNL*AKGLPA
Trigger: AGCTGGCAAACCTTTGGCCCAAAGATTCCCAGCAGG...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGAGGGCAAGGCCTTATaGCCACACAGGGATCCGGGC +
Preference number: 2 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDEGKAL*PHRDPG
Trigger: GCCCGGATCCCTGTGTGGCCATAAGGCCTTGCCCTC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCTGCCATCCACGGGCTaGGAGAAGCCTCAGCCGGTG +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQLPSTG*EKPQPV
Trigger: CACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGAGCCGAGGAGCCGGCTaGTCGAGACAATGGCGGTGC +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQSRGAG*SRQWRC
Trigger: GCACCGCCATTGTCTCGACCAGCCGGCTCCTCGGCT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGGACAAGGATTGGGTTaGGGTGATGGTATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWGQGLG*GDGMSR
Trigger: TCTGCTCATACCATCACCCCAACCCAATCCTTGTCC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGAGGCGGCGACTCACCTaGCAAGCAGCGAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQRRRLT*QAASPA
Trigger: GGCAGGACTCGCTGCTTGCCAGGTGAGTCGCCGCCT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCTCTTGTTTCAGCGATaGGACAGTGTTAGGGTCCTA +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWLLFQR*DSVRVL
Trigger: TAGGACCCTAACACTGTCTCATCGCTGAAACAAGAG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACACGCTGCGTTTCGGTaGTATGGCCTCTTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAHAAFR*YGLLFQ
Trigger: CTGAAACAAGAGGCCATAGCACCGAAACGCAGCGTG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTCTCTTGGTGGCCTGCTaGCCGCTATTGCTTCTAAAT +
Preference number: 2 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASLLVAC*PLLLLN
Trigger: ATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAG...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTGCGTTTCGGTGCTATaGCCTCTTGTTTCAGCGATG +
Preference number: 2 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASCVSVL*PLVSAM
Trigger: CATCGCTGAAACAAGAGGCCATAGCACCGAAACGCA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCAATGGCGGTGCTGCTaGGGTGCTCACAATGGCTGG +
Preference number: 2 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDQWRCC*GAHNGW
Trigger: CCAGCCATTGTGAGCACCCCAGCAGCACCGCCATTG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGGCTGGTCGAGACAATaGCGGTGCTGCTGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQGWSRQ*RCCWGA
Trigger: AGCACCCCAGCAGCACCGCCATTGTCTCGACCAGCC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGAGTAAACAGGCGGGCTaGGGAGCCTCCCTAGACCTC +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQSKQAG*GASLDL
Trigger: GAGGTCTAGGGAGGCTCCTCAGCCCGCCTGTTTACT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAGAAACGTGAACCCCTaGGAAATGCATGGTATACAC +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWRNVNP*EMHGIH
Trigger: GTGTATACCATGCATTTCTCAGGGGTTCACGTTTCT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGGATCCCTTGGCTTCTaGCTCTCCACAGATGTGCCC +
Preference number: 2 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDGSLGF*LSTDVP
Trigger: GGGCACATCTGTGGAGAGGCAGAAGCCAAGGGATCC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACACACACACAGAATGTaGGGACAAGGATTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEHTHRM*GQGLGW
Trigger: CCAACCCAATCCTTGTCCCCACATTCTGTGTGTGTG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCCTAAAGGAGAGGTTTaGAGGCGAAAAGAACTCCAA +
Preference number: 2 (lower is better)
Translates to: KPTECPYTCILCGLPSLSPKGEV*RRKELQ
Trigger: TTGGAGTTCTTTTCGCCTCCAAACCTCTCCTTTAGG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCCTAAAGGAGAGGTTTaGAGGCGAAAAGAACTCCAA +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWPKGEV*RRKELQ
Trigger: TTGGAGTTCTTTTCGCCTCCAAACCTCTCCTTTAGG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAAAGGAATACAGTCATaGTCCCAGGTATCTAGACCC +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWKGIQS*SQVSRP
Trigger: GGGTCTAGATACCTGGGACCATGACTGTATTCCTTT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAAGAACAGGAAGAAGATaGTGCGAGGACCATCCCTAT +
Preference number: 2 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGRTGRR*CEDHPY
Trigger: ATAGGGATGGTCCTCGCACCATCTTCTTCCTGTTCT...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGGACAAGGACCTGCCTaGAAAACTCCCCAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDGQGPA*KTPQRL
Trigger: GAGCCTCTGGGGAGTTTTCCAGGCAGGTCCTTGTCC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAACAGGAAGAAGATGGTaGGAGGACCATCCCTATGAA +
Preference number: 2 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAETGRRW*EDHPYE
Trigger: TTCATAGGGATGGTCCTCGCACCATCTTCTTCCTGT...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGATGGTAGCAGGGTGCTaGCACCCAGGGAGACAGAGA +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQMVAGC*HPGRQR
Trigger: TCTCTGTCTCCCTGGGTGCCAGCACCCTGCTACCAT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 90 bp GGGCCTTCTTCAGCCCTTTTAGCGATGGCCCCATATAGCCCAAGTTaGATCTCTGAGATATTCCATAGTGTGAAGAAAGCTAAATCCCGG +
Preference number: 2 (lower is better)
Translates to: GPSSALLAMAPYSPS*ISEIFHSVKKAKSR
Trigger: CCGGGATTTAGCTTTCTTCACACTATGGAATATCTCAGAGATCAAACTTGGGCTATATGGGGCCATCGCTAAAAGGGCTGAAGAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCATTTTTCCACAGCAATaGGATTGTCTTTCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLIFPQQ*DCLSSG
Trigger: ACCTGAAGAAAGACAATCTCATTGCTGTGGAAAAAT...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCTTCTGGGCTCAGTTTaGAGCTGTTATTTATGTGAA +
Preference number: 2 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWLLGSV*SCYLCE
Trigger: TTCACATAAATAACAGCTTCAAACTGAGCCCAGAAG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATTTGGGCCAAAGGTTTaGCAGCTTGTAGATGCGTTA +
Preference number: 2 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEFGPKV*QLVDAL
Trigger: TAACGCATCTACAAGCTGGCAAACCTTTGGCCCAAA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGAATGTCCATACACATaGATCCTGTGCGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQECPYT*ILCGLP
Trigger: GGGGAGCCCGCACAGGATGCATGTGTATGGACATTC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCTGTGTATAACGCATTaGAAGCCTGGTGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQLCITH*KPGGQA
Trigger: GGCCTGGCCACCAGGCTTCCAATGCGTTATACACAG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTCTGAAGCTCTCCCTTaGCTCCTCTGCTCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQSEALP*LLCSEH
Trigger: GTGCTCAGAGCAGAGGAGCCAAGGGAGAGCTTCAGA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCCTTAAAATTTACACATaGACACCTGCACACGCGCAT +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGLKIYT*TPAHAH
Trigger: ATGCGCGTGTGCAGGTGTGCATGTGTAAATTTTAAG...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGGCCTAGAAGACTCCTaGAGTCATATTCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDGLEDS*SHIHRR
Trigger: CCTTCTGTGAATATGACTGCAGGAGTCTTCTAGGCC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATAGAACAGGAAGAAGATaGTGCGAGGACCATCCCTAT +
Preference number: 2 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDRTGRR*CEDHPY
Trigger: ATAGGGATGGTCCTCGCACCATCTTCTTCCTGTTCT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCATTTTTCCACAGCAATaGGATTGTCTTTCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGIFPQQ*DCLSSG
Trigger: ACCTGAAGAAAGACAATCTCATTGCTGTGGAAAAAT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATTTTGGGCCAAAGGTTTaGCAGCTTGTAGATGCGTTA +
Preference number: 2 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDFGPKV*QLVDAL
Trigger: TAACGCATCTACAAGCTGGCAAACCTTTGGCCCAAA...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp GAGATGAGGAGCCGAGGAGCCGGCTGGTCGAGACAATaGCGGTGCTGCTGGGGTGCTCACAATGGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: EMRSRGAGWSRQ*RCCWGAHNGWG
Trigger: CCCCCAGCCATTGTGAGCACCCCAGCAGCACCGCCATTGTCTCGACCAGCCGGCTCCTCGGCTCCTCATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp GAGCAGCAGACAGCAACAGCAGCAACCGCGTTCTGGTaGGGAGGGCTCCTCGCTCCCAAGGACGGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: EQQTATAATAFW*GGLLAPKDGWP
Trigger: AGGCCAGCCGTCCTTGGGAGCGAGGAGCCCTCCTCACCAGAACGCGGTTGCTGCTGTTGCTGTCTGCTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp CGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTaGCCACGCTGCGTTTCGGTGCTATGGCCTCTTGTT +
Preference number: 3 (lower is better)
Translates to: RCHPRAGRSLSR*PRCVSVLWPLV
Trigger: AACAAGAGGCCATAGCACCGAAACGCAGCGTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp GCAAGGCCTTATGGCCACACAGGGATCCGGGCCAGCTaGAATGTGAAGGAATCGGAGCCCAGGGCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: ARPYGHTGIRAS*NVKESEPRAPA
Trigger: GGCTGGGGCCCTGGGCTCCGATTCCTTCACATTCCAGCTGGCCCGGATCCCTGTGTGGCCATAAGGCCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp TGGCAGGCATGCCTAGTTACGCTGCCATCCACGGGCTaGGAGAAGCCTCAGCCGGTGCCCACGCTGCGTTTC +
Preference number: 3 (lower is better)
Translates to: WQACLVTLPSTG*EKPQPVPTLRF
Trigger: GAAACGCAGCGTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCATGCCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp CCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGCTaGGTTTCGGTGCTATGGCCTCTTGTTTCAGCGATG +
Preference number: 3 (lower is better)
Translates to: PRAGRSLSRCPR*VSVLWPLVSAM
Trigger: CATCGCTGAAACAAGAGGCCATAGCACCGAAACGCAGCGTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp TCCTCAGGTGTAGAGATGAGGAGCCGAGGAGCCGGCTaGTCGAGACAATGGCGGTGCTGCTGGGGTGCTCAC +
Preference number: 3 (lower is better)
Translates to: SSGVEMRSRGAG*SRQWRCCWGAH
Trigger: GTGAGCACCCCAGCAGCACCGCCATTGTCTCGACCAGCCGGCTCCTCGGCTCCTCATCTCTACACCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp TCACCCCCAGAGCAGGGTGACGAGGGCAAGGCCTTATaGCCACACAGGGATCCGGGCCAGCTGGAATGTGAA +
Preference number: 3 (lower is better)
Translates to: SPPEQGDEGKAL*PHRDPGQLECE
Trigger: TTCACATTCCAGCTGGCCCGGATCCCTGTGTGGCCATAAGGCCTTGCCCTCGTCACCCTGCTCTGGGGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp GTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTaGCAAGCAGCGAGTCCTGCCACAGGTCAAACATGC +
Preference number: 3 (lower is better)
Translates to: VHAPVPDRRRLT*QAASPATGQTC
Trigger: GCATGTTTGACCTGTGGCAGGACTCGCTGCTTGCCAGGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp TCATGCTTGGTTGAGGCCTGCCTGCTGGGGCCCGCCTaGTGGGAATCTTTGGGCCAAAGGTTTGCCAGCTTG +
Preference number: 3 (lower is better)
Translates to: SCLVEACLLGPA*WESLGQRFASL
Trigger: CAAGCTGGCAAACCTTTGGCCCAAAGATTCCCAGCAGGCGGGCCCCAGCAGGCAGGCCTCAACCAAGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp ATCGTGCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTaGCAGACAGGCGGCGACTCACCTGGCAAGCAGCGA +
Preference number: 3 (lower is better)
Translates to: IVQRSFEPCMLQ*QTGGDSPGKQR
Trigger: TCGCTGCTTGCCAGGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGCACGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp GGCAGGCCAGACTTTAGGGGTCAGGCAGGTACTGTCTaGCCTACTCCTGGGCCAGTGAGGGAGATGCTGACA +
Preference number: 3 (lower is better)
Translates to: GRPDFRGQAGTV*PTPGPVREMLT
Trigger: TGTCAGCATCTCCCTCACTGGCCCAGGAGTAGGGCAGACAGTACCTGCCTGACCCCTAAAGTCTGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp ACTTTAGAGCCTAGGGGTCAGCCAGAGACTGACCCGTaGACACCCTGCCTGCCCTCATCCCCTAGTCTAGCC +
Preference number: 3 (lower is better)
Translates to: TLEPRGQPETDP*TPCLPSSPSLA
Trigger: GGCTAGACTAGGGGATGAGGGCAGGCAGGGTGTCCACGGGTCAGTCTCTGGCTGACCCCTAGGCTCTAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCAAGCCAATGGTCCCATaGGTCCGGCAGATGCTTCAC +
Preference number: 3 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPKPMVP*VRQMLH
Trigger: GTGAAGCATCTGCCGGACCAATGGGACCATTGGCTT...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCATGTGGGGACAAGGATaGGGTTGGGGTGATGGTATG +
Preference number: 3 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTMWGQG*GWGDGM
Trigger: CATACCATCACCCCAACCCAATCCTTGTCCCCACAT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGCCTGCTGCCCGCTATaGCTTCTAAATCAACGTTTC +
Preference number: 3 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTACCPL*LLNQRF
Trigger: GAAACGTTGATTTAGAAGCAATAGCGGGCAGCAGGC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTCCCAGGGAAGGGCTTaGGGGAGGCATGTAGCCCAG +
Preference number: 3 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSQGRA*GRHVAQ
Trigger: CTGGGCTACATGCCTCCCCAAAGCCCTTCCCTGGGA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTCCCAGGGAAGGGCTTaGGGGAGGCATGTAGCCCAG +
Preference number: 3 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSQGRA*GRHVAQ
Trigger: CTGGGCTACATGCCTCCCCAAAGCCCTTCCCTGGGA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp GTGAGGAGGGCTCCTCGCTCCCAAGGACGGCTGGCCTaGGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGT +
Preference number: 3 (lower is better)
Translates to: VRRAPRSQGRLA*VRQGLLKDMKG
Trigger: ACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAGGCCAGCCGTCCTTGGGAGCGAGGAGCCCTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp GGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTaGCTCTCCACAGATGTGCCCCAAGCTTTGCCCTTG +
Preference number: 3 (lower is better)
Translates to: GNHRAQPGSLGF*LSTDVPQALPL
Trigger: CAAGGGCAAAGCTTGGGGCACATCTGTGGAGAGGCAGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp TGGGCAGGACTGTACTCTCACGGACAAGGACCTGCCTaGAAAACTCCCCAGAGGCTCCAGCATACAGACCAG +
Preference number: 3 (lower is better)
Translates to: WAGLYSHGQGPA*KTPQRLQHTDQ
Trigger: CTGGTCTGTATGCTGGAGCCTCTGGGGAGTTTTCCAGGCAGGTCCTTGTCCGTGAGAGTACAGTCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCATGTCATTCTCATGCTaGGTTGAGGCCTGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPMSFSC*VEACLL
Trigger: CAGCAGGCAGGCCTCAACCAAGCATGAGAATGACAT...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGACCTCGCCCTGGGTTaGTGCTCTTGGTGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASDLALG*CSWWPA
Trigger: AGCAGGCCACCAAGAGCACAAACCCAGGGCGAGGTC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGAGTGTGTTGAGGCCTaGCGTGGGCAGAGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGECVEA*RGQRRV
Trigger: CACCCTCCTCTGCCCACGCAAGGCCTCAACACACTC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp ATCCCGGGAACTCGGGCTCTTAAGTCCAACACAGCTTaGAGTGTCCCAACCACAGCTGCCGATGGTGGGACA +
Preference number: 3 (lower is better)
Translates to: IPGTRALKSNTA*SVPTTAADGGT
Trigger: TGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGGACTTAAGAGCCCGAGTTCCCGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp GGGGCCCGCCTGCTGGGAATCTTTGGGCCAAAGGTTTaGCAGCTTGTAGATGCGTTATACGCAGAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: GARLLGIFGPKV*QLVDALYAESR
Trigger: TCTGGACTCTGCGTATAACGCATCTACAAGCTGGCAAACCTTTGGCCCAAAGATTCCCAGCAGGCGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp AACACATGTCATTCTCATGCTTGGTTGAGGCCTGCCTaGTGGGGCCCGCCTGCTGGGAATCTTTGGGCCAAA +
Preference number: 3 (lower is better)
Translates to: NTCHSHAWLRPA*WGPPAGNLWAK
Trigger: TTTGGCCCAAAGATTCCCAGCAGGCGGGCCCCAGCAGGCAGGCCTCAACCAAGCATGAGAATGACATGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp CTGCCTGCTCCCTGGCCTGGCAAATGTAGGCAGTTCTaGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: LPAPWPGKCRQF*QVFTSVSQSQG
Trigger: TCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTGCCTACATTTGCCAGGCCAGGGAGCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp TCTAGACCCTGGGCACATCCTGTACACACCTGGGCCTaGGAGTTCCTCAAAGAGGGCCTTCTTCAGCCCTTT +
Preference number: 3 (lower is better)
Translates to: SRPWAHPVHTWA*EFLKEGLLQPF
Trigger: AAAGGGCTGAAGAAGGCCCTCTTTGAGGAACTCCCAGGCCCAGGTGTGTACAGGATGTGCCCAGGGTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp AGACCTCGCCCTGGGTTTGTGCTCTTGGTGGCCTGCTaGCCGCTATTGCTTCTAAATCAACGTTTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: RPRPGFVLLVAC*PLLLLNQRFSL
Trigger: CAGGGAGAAACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGGGCGAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp CCTAGACCTCGCCCTGGGTTTGTGCTCTTGGTGGCCTaGTGCCCGCTATTGCTTCTAAATCAACGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: PRPRPGFVLLVA*CPLLLLNQRFS
Trigger: GGAGAAACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGGGCGAGGTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp AAAACTCCCCAGAGGCTCCAGCATACAGACCAGAATTaGTGCCCTGGCTGTTCTTTCAGTGTGGGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: KTPQRLQHTDQN*CPGCSFSVGPE
Trigger: CTCAGGGCCCACACTGAAAGAACAGCCAGGGCAGCAATTCTGGTCTGTATGCTGGAGCCTCTGGGGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp CTATTGGGCAGGACTGTACTCTCACGGACAAGGACCTaGCTGGAAAACTCCCCAGAGGCTCCAGCATACAGA +
Preference number: 3 (lower is better)
Translates to: LLGRTVLSRTRT*LENSPEAPAYR
Trigger: TCTGTATGCTGGAGCCTCTGGGGAGTTTTCCAGGCAGGTCCTTGTCCGTGAGAGTACAGTCCTGCCCAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp CACATACAGTATCTCATGACTTCTATGGCTCTCCAGTaGCACCCGGTGCACATGGTAGCAGGGTGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: HIQYLMTSMALQ*HPVHMVAGCWH
Trigger: GTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCTCCACAGCAATGAGATaGTCTTTCTTCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPSTAMR*SFFRSS
Trigger: TGAAGACCTGAAGAAAGACAATCTCATTGCTGTGGA...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTGTGACCAGTTTCTTTaGGCTCAGGCCTGGGATAGG +
Preference number: 3 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGCDQFL*AQAWDR
Trigger: CCTATCCCAGGCCTGAGCCAAAAGAAACTGGTCACA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp GAATTGCTGCCCTGGCTGTTCTTTCAGTGTGGGCCCTaGGACTGTTCACCCTGCCCAAAGAACAGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: ELLPWLFFQCGP*DCSPCPKNRKK
Trigger: CTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAAAGAACAGCCAGGGCAGCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp GGTCCTAATGTTTGTAAAGTTCTCCCAAACCCATGCTaGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAG +
Preference number: 3 (lower is better)
Translates to: GPNVCKVLPNPC*PCGRLLQCHPQ
Trigger: CTGGGGGTGACACTGGAGCAGACGTCCACATGGCCAGCATGGGTTTGGGAGAACTTTACAAACATTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp CCAAAGTCAGGGAGAAGCGCTCCTAAAGGAGAGGTTTaGAGGCGAAAAGAACTCCAAGCAAGAGGTCGGGCA +
Preference number: 3 (lower is better)
Translates to: PKSGRSAPKGEV*RRKELQARGRA
Trigger: TGCCCGACCTCTTGCTTGGAGTTCTTTTCGCCTCCAAACCTCTCCTTTAGGAGCGCTTCTCCCTGACTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp AAAGGAATACAGTCATGGTCCCAGGTATCTAGACCCTaGGCACATCCTGTACACACCTGGGCCTGGGAGTTC +
Preference number: 3 (lower is better)
Translates to: KGIQSWSQVSRP*AHPVHTWAWEF
Trigger: GAACTCCCAGGCCCAGGTGTGTACAGGATGTGCCCAGGGTCTAGATACCTGGGACCATGACTGTATTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGTAAGGCAGGGTCTCTaGAAAGACATGAAAGGTCCC +
Preference number: 3 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLVRQGL*KDMKGP
Trigger: GGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTAC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTATGTGGGGACAAGGATaGGGTTGGGGTGATGGTATG +
Preference number: 3 (lower is better)
Translates to: KPTECPYTCILCGLPSLSMWGQG*GWGDGM
Trigger: CATACCATCACCCCAACCCAATCCTTGTCCCCACAT...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTGTGACCAGTTTCTTTaGGCTCAGGCCTGGGATAGG +
Preference number: 3 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWCDQFL*AQAWDR
Trigger: CCTATCCCAGGCCTGAGCCAAAAGAAACTGGTCACA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp ATTGGTCCGGCAGATGCTTCACCTAGGTCGCTGCTGTaGGAACACATGTCATTCTCATGCTTGGTTGAGGCC +
Preference number: 3 (lower is better)
Translates to: IGPADASPRSLL*EHMSFSCLVEA
Trigger: GGCCTCAACCAAGCATGAGAATGACATGTGTTCTCACAGCAGCGACCTAGGTGAAGCATCTGCCGGACCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp GTCCCATTGGTCCGGCAGATGCTTCACCTAGGTCGCTaGTGTGAGAACACATGTCATTCTCATGCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: VPLVRQMLHLGR*CENTCHSHAWL
Trigger: CAACCAAGCATGAGAATGACATGTGTTCTCACAGCAGCGACCTAGGTGAAGCATCTGCCGGACCAATGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp CTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTaGAGAGGGTTACACCAACCCTTCAGTAAGTTTTGC +
Preference number: 3 (lower is better)
Translates to: LMPQRRQVLGQM*RGLHQPFSKFC
Trigger: GCAAAACTTACTGAAGGGTTGGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp GACACATTATTTACAGCAAGGGAGGAGAAGGGCTATTaGGCAGGACTGTACTCTCACGGACAAGGACCTGCC +
Preference number: 3 (lower is better)
Translates to: DTLFTAREEKGY*AGLYSHGQGPA
Trigger: GGCAGGTCCTTGTCCGTGAGAGTACAGTCCTGCCCAATAGCCCTTCTCCTCCCTTGCTGTAAATAATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGCTGCGCCCAGGCCTTaGACTCCAGAGATTTTTCCA +
Preference number: 3 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGAAPRP*TPEIFP
Trigger: TGGAAAAATCTCTGGAGTCAAAGGCCTGGGCGCAGC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTATGTCATTCTCATGCTaGGTTGAGGCCTGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASMSFSC*VEACLL
Trigger: CAGCAGGCAGGCCTCAACCAAGCATGAGAATGACAT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATCTGTGTATAACGCATaGGAAGCCTGGTGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAESVYNA*EAWWPG
Trigger: GCCTGGCCACCAGGCTTCCAATGCGTTATACACAGA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGCCTGCTGCCCGCTATaGCTTCTAAATCAACGTTTC +
Preference number: 3 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLACCPL*LLNQRF
Trigger: GAAACGTTGATTTAGAAGCAATAGCGGGCAGCAGGC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp CGTTATACGCAGAGTCCAGAGCTGCGCCCAGGCCTTTaGCTCCAGAGATTTTTCCACAGCAATGAGATTGTC +
Preference number: 3 (lower is better)
Translates to: RYTQSPELRPGL*LQRFFHSNEIV
Trigger: GACAATCTCATTGCTGTGGAAAAATCTCTGGAGTCAAAGGCCTGGGCGCAGCTCTGGACTCTGCGTATAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp ATTTTCAGCCATAGCCAGCTCCTTCTGGGTACCTTATaGCCCCTGGCTCCACTCCAGATAGATCTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: IFSHSQLLLGTL*PLAPLQIDLLA
Trigger: AGCCAAGAGATCTATCTGGAGTGGAGCCAGGGGTCATAAGGTACCCAGAAGGAGCTGGCTATGGCTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp ACAGAAATACCTTGTCACAGTACAGGGGAGGGACACTaGAGTACCACGAGTTCTCACAGAGCACAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: TEIPCHSTGEGH*STTSSHRAQED
Trigger: GTCCTCCTGTGCTCTGTGAGAACTCGTGGTACTTCAGTGTCCCTCCCCTGTACTGTGACAAGGTATTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp ACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTaGGAGGACCATCCCTATGAAGTGAGTGTGTTGAGG +
Preference number: 3 (lower is better)
Translates to: TVHPAQRTGRRW*EDHPYEVSVLR
Trigger: CCTCAACACACTCACTTCATAGGGATGGTCCTCGCACCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp GAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATaGTGCGAGGACCATCCCTATGAAGTGAGTGTGTTG +
Preference number: 3 (lower is better)
Translates to: ETVHPAQRTGRR*CEDHPYEVSVL
Trigger: CAACACACTCACTTCATAGGGATGGTCCTCGCACCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGTAAGGCAGGGTCTCTaGAAAGACATGAAAGGTCCC +
Preference number: 3 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEVRQGL*KDMKGP
Trigger: GGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTAC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp AGCAAACCCACAGAATGTCCATACACATGCATCCTGTaGGGGCTCCCCTCTCTGTCTAGTCTAAGGTTTGTT +
Preference number: 3 (lower is better)
Translates to: SKPTECPYTCIL*GLPSLSSLRFV
Trigger: AACAAACCTTAGACTAGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp AAATCCTACAGCAAACCCACAGAATGTCCATACACATaGATCCTGTGCGGGCTCCCCTCTCTGTCTAGTCTA +
Preference number: 3 (lower is better)
Translates to: KSYSKPTECPYT*ILCGLPSLSSL
Trigger: TAGACTAGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTTGCTGTAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGCTGCGCCCAGGCCTTaGACTCCAGAGATTTTTCCA +
Preference number: 3 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDAAPRP*TPEIFP
Trigger: TGGAAAAATCTCTGGAGTCAAAGGCCTGGGCGCAGC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp GAATGTGGGGACAAGGATTGGGTTGGGGTGATGGTATaGGCAGATAGAGCTATCCAGTTTCTCAACTGCATG +
Preference number: 3 (lower is better)
Translates to: ECGDKDWVGVMV*ADRAIQFLNCM
Trigger: CATGCAGTTGAGAAACTGGATAGCTCTATCTGCTCATACCATCACCCCAACCCAATCCTTGTCCCCACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp CACACACAGAATGTGGGGACAAGGATTGGGTTGGGGTaGTGGTATGAGCAGATAGAGCTATCCAGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: HTQNVGTRIGLG*WYEQIELSSFS
Trigger: TGAGAAACTGGATAGCTCTATCTGCTCATACCATCACCCCAACCCAATCCTTGTCCCCACATTCTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR GCA 72 bp ATAAGGGCCAGGGATACCTATGGCCTAGAAGACTCCTaGAGTCATATTCACAGAAGGGCAAAGATCTGTCCT +
Preference number: 3 (lower is better)
Translates to: IRARDTYGLEDS*SHIHRRAKICP
Trigger: AGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAGGCCATAGGTATCCCTGGCCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp AAAATGCATGAGAAACGTGAACCCCTGAGAAATGCATaGTATACACCAAAGCTCTCTGGAGGCAGGCCAGAC +
Preference number: 3 (lower is better)
Translates to: KMHEKREPLRNA*YTPKLSGGRPD
Trigger: GTCTGGCCTGCCTCCAGAGAGCTTTGGTGTATACCATGCATTTCTCAGGGGTTCACGTTTCTCATGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCTCCACAGCAATGAGATaGTCTTTCTTCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LSKAGSLERHERSPKPMVSTAMR*SFFRSS
Trigger: TGAAGACCTGAAGAAAGACAATCTCATTGCTGTGGA...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTCTGTGTATAACGCATaGGAAGCCTGGTGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQSVYNA*EAWWPG
Trigger: GCCTGGCCACCAGGCTTCCAATGCGTTATACACAGA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCTTTGGGCCAAAGGTTaGCCAGCTTGTAGATGCGTT +
Preference number: 3 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDLWAKG*PACRCV
Trigger: AACGCATCTACAAGCTGGCAAACCTTTGGCCCAAAG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCCCATATAGCCCAAGTTaGATCTCTGAGATATTCCAT +
Preference number: 3 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGPYSPS*ISEIFH
Trigger: ATGGAATATCTCAGAGATCAAACTTGGGCTATATGG...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR-3UTR CAA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCATCCAGAGAGTTTCATTaGATTATATATGTCCCTCCG +
Preference number: 3 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGASREFH*IIYVPP
Trigger: CGGAGGGACATATATAATCAAATGAAACTCTCTGGA...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp AAACAAGACATAGAAGCTAGAGGGAGAAAATGTAGATaGCCACCACTCTCTAGGGTACCACACTTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: KQDIEARGRKCR*PPLSRVPHLRG
Trigger: TCCTCTCAAGTGTGGTACCCTAGAGAGTGGTGGCCATCTACATTTTCTCCCTCTAGCTTCTATGTCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR TCA 72 bp AGAGGGTTACACCAACCCTTCAGTAAGTTTTGCTCTTaGGAGACCTTCTGGGCTCAGTTTGAAGCTGTTATT +
Preference number: 3 (lower is better)
Translates to: RGLHQPFSKFCS*ETFWAQFEAVI
Trigger: AATAACAGCTTCAAACTGAGCCCAGAAGGTCTCTCAAGAGCAAAACTTACTGAAGGGTTGGTGTAACCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CCA 72 bp CTGGGAAGATGTGACCAGTTTCTTTTGGCTCAGGCCTaGGATAGGAGGAAAAATGATATACAAGTAGAAATC +
Preference number: 3 (lower is better)
Translates to: LGRCDQFLLAQA*DRRKNDIQVEI
Trigger: GATTTCTACTTGTATATCATTTTTCCTCCTATCCCAGGCCTGAGCCAAAAGAAACTGGTCACATCTTCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGCTGCGGGGGCCCGTaGGCTGAGAGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGCGGP*AERGHH
Trigger: ATGGTGGCCCCTCTCAGCCCACGGGCCCCCGCAGCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACACGGGGGCAGCAAGCTaGGTGGGGCTGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHTGAAS*VGLVPG
Trigger: CCCTGGGACCAGCCCCACCCAGCTTGCTGCCCCCGT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACACCAGCGTGGCGGCCTaGGTGCCTCCCGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHTSVAA*VPPVVT
Trigger: AGTGACCACGGGAGGCACTCAGGCCGCCACGCTGGT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACCCATGTCCCGAGCGTaGGGTTTGGCAGCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAPMSRA*GLAARR
Trigger: ACGGCGGGCTGCCAAACCGCACGCTCGGGACATGGG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTGGCAGCAGGGGCTGTaGCCCGGGTGGTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTWQQGL*PGWLAG
Trigger: GCCAGCCAACCACCCGGGGCACAGCCCCTGCTGCCA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGCGCTGCCGGCGGCTaGGGCTGCTGTCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGAAGG*GCCHCP
Trigger: AGGACAGTGACAGCAGCCCCAGCCGCCGGCAGCGCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACAGGAGTCCTCGATGGTaGGCAGCAGGGGCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHRSPRW*AAGARG
Trigger: CCCACGGGCCCCTGCTGCCCACCATCGAGGACTCCT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGTCCAGGAGCCGGTGTaGGGACAGGGGCGACACTGG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAVQEPV*GQGRHW
Trigger: CCAGTGTCGCCCCTGTCCCCACACCGGCTCCTGGAC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGGCCGTGCCCGGCCATaGGCCATGCTCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHGRARP*AMLRDE
Trigger: CTCATCCCTGAGCATGGCCCATGGCCGGGCACGGCC...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGCTCCTCACCAGCGTaGCGGCCTGAGTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGSSPA*RPECLP
Trigger: CGGGAGGCACTCAGGCCGCCACGCTGGTGAGGAGCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCACTAGCGGGAGCCCCTaGGGTCCCTCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTTSGSP*GPSRPG
Trigger: GCCAGGCCTGGAGGGACCCCAGGGGCTCCCGCTAGT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCCGGTGTTCCTTGGCTaGGGTATGCCGGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHPVFLG*GMPAWT
Trigger: GGTCCAGGCCGGCATACCTCAGCCAAGGAACACCGG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCTCTGGAGGGGCAGTTaGCTGGGTAGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHLWRGS*LGRPRH
Trigger: GTGCCTGGGCCTACCCAGGCAACTGCCCCTCCAGAG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGTATGGCCCCCATGGTaGCTGAACCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAVWPPW*LNRSER
Trigger: CCGCTCCGACCGGTTCAGGCACCATGGGGGCCATAC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGCACTGAGGTGGCCCTaGCTGCTTCAGCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPALRWP*LLQPGG
Trigger: CCCGCCAGGCTGAAGCAGCCAGGGCCACCTCAGTGC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTGGTGGCCTGAGGGCTaGCCTTGGTGGCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTWWPEG*PWWPEG
Trigger: GCCCTCAGGCCACCAAGGCCAGCCCTCAGGCCACCA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACACTGGCCAGCGGGTGTaGTGCAACCCTGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHTGQRV*CNPGAA
Trigger: TGCGGCTCCAGGGTTGCACCACACCCGCTGGCCAGT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCTCTCCTTCTGCCCCTaGCTGACTAGCGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHLSFCP*LTSGSP
Trigger: GGGGCTCCCGCTAGTCAGCCAGGGGCAGAAGGAGAG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCAGCACACATGCGGCTaGTCTCTCGGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHQHTCG*SLGLWW
Trigger: CCACCACAGCCCGAGAGATCAGCCGCATGTGTGCTG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGGACGGAGCAGTCGCTaGTGGTCTGTATGCCCACGC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHGRSSR*WSVCPR
Trigger: GCGTGGGCATACAGACCATCAGCGACTGCTCCGTCC...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGGCCATGCTCAGGGATaGGGGCTTGGAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTGHAQG*GLGARL
Trigger: AAGGCGGGCTCCAAGCCCTCATCCCTGAGCATGGCC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGTGGTTGGCTGGCTCTaGGGCTGTAGCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTVVGWL*GCSRAW
Trigger: CCAGGCTCGGCTACAGCCTCAGAGCCAGCCAACCAC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACTACCTGCAGCGTCCTaGGGGGACTTTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRALPAAS*GDFRPP
Trigger: AGGAGGCCGAAAGTCCCCGCAGGACGCTGCAGGTAG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGGGAAAGACGAGACCTaGGGCGGCGGACGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTGKDET*GGGRVA
Trigger: AGCAACCCGTCCGCCGCCGCAGGTCTCGTCTTTCCC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACCGAGGCAGTGGGGGTaGTGTCCTTCGTCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAPRQWG*CPSSVR
Trigger: GCGAACTGACGAAGGACAGCACCCCCACTGCCTCGG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCTGGCCCAGCCCCTGTaGCCCTTTCTGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHLAQPL*PFLLQR
Trigger: CCTCTGAAGCAGAAAGGGCCACAGGGGCTGGGCCAG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGCTTGGCCTGAGGGCTaGCCTTGGTGGTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTAWPEG*PWWSEG
Trigger: GCCCTCAGACCACCAAGGCCAGCCCTCAGGCCAAGC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCTGCCACCACGCACCATaGGCCGCAGTACCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPCHHAP*AAVPRQ
Trigger: CTGCCTCGGTACTGCGGCCCATGGTGCGTGGTGGCA...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGACGGCCTCTCCTGCTaGCTTCTGGCCAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTDGLSC*LLARWW
Trigger: CCACCACCTGGCCAGAAGCCAGCAGGAGAGGCCGTC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGGGTGGAAAGCCGGTTaGCTTGGCAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAGWKAG*LGRPGS
Trigger: TGAGCCTGGCCTGCCAAGCCAACCGGCTTTCCACCC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGGATACGTGGGGGCTaGGCTCTGGCTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGIRGG*ALAHAA
Trigger: AGCAGCGTGAGCCAGAGCCCAGCCCCCACGTATCCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACAGCAGCAGGGCAGAGTaGGTCCCTCAAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHSSRAE*VPQGRL
Trigger: CAGCCGTCCTTGAGGGACCCACTCTGCCCTGCTGCT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGCTGGAGCAGAACTGTaGGCAGGTGTCCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPAGAEL*AGVPGR
Trigger: CCTCCCGGGGACACCTGCCCACAGTTCTGCTCCAGC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGACCCTTCTTCTGCATaGCAGGGGCAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRADPSSA*QGQGWP
Trigger: AGGCCAGCCCTGCCCCTGCCATGCAGAAGAAGGGTC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGCAGAAGGCCCAGTGTaGGCCTGCCGGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPAEGPV*ACREPF
Trigger: AAAGGGCTCCCGGCAGGCCCACACTGGGCCTTCTGC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCCTGAGGTTTCCCCGCTaGTTGGCTGGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTLRFPR*LAGSRG
Trigger: GCCCCTGCTGCCAGCCAACCAGCGGGGAAACCTCAG...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCCAGGGCTCCAGGCCCTaGTCCAGGACCCATTCTAGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTQGSRP*SRTHSS
Trigger: GCTAGAATGGGTCCTGGATCAGGGCCTGGAGCCCTG...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACAGTGCTTCAGTGAGCTaGGGTCCACTGCCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHSASVS*GPLPSP
Trigger: GGGACTCGGCAGTGGACCTCAGCTCACTGAAGCACT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATGTCTGTGGCTGACGTaGTGCTGTGCCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRACLWLT*CCARGC
Trigger: ACACCCTCGGGCACAGCATCACGTCAGCCACAGACA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGCCGGGGAGTGTAGCTaGTGCTGGCTCTTGGACCGA +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTAGECS*CWLLDR
Trigger: TCGGTCCAAGAGCCAGCAGCAGCTACACTCCCCGGC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACAGCGGTGCCGCGCCTTaGGCTGCTGCTTTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHSGAAP*AAALLL
Trigger: AAGAAGCAAAGCAGCAGCGCAAGGCGCGGCACCGCT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATGCTCCTCCTCACGATaGCTCTGCAGCTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRACSSSR*LCSSTL
Trigger: GAGGGTGGAGCTGCAGAGGCATCGTGAGGAGGAGCA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGTGTCCGCTTCACCTTaGGGACCAGGCCGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTVSASP*GPGRWV
Trigger: CACCCAACGGCCTGGTCCGCAAGGTGAAGCGGACAC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACAGCTTGGTGGACTCATaGTCCACCAGCCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHSLVDS*STSRRS
Trigger: GGACCTGCGGCTGGTGGAGCATGAGTCCACCAAGCT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCCGAGGCAGTGGGGGTaGTGTCCTTCGTCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPPRQWG*CPSSVR
Trigger: GCGAACTGACGAAGGACAGCACCCCCACTGCCTCGG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACCGTGGTCACTGTGGTaGCGGTGTTCCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAPWSLW*RCSLAE
Trigger: CTCAGCCAAGGAACACCGGCACCACAGTGACCACGG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACTGGATGATGGTGGCTaGGACTGCTGCGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRALDDGG*DCCGPG
Trigger: TCCAGGACCGCAGCAGTCGCAGCCACCATCATCCAG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGTGCCCGAGGGTGTCTaGCTGGATGATGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTVPEGV*LDDGGC
Trigger: GCAGCCACCATCATCCAGGCAGACACCCTCGGGCAC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCTGGCTGCTTCAGCCTaGCGGGGACCAGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPLAASA*RGPDCV
Trigger: CACACAGTCTGGTCCCCGCCAGGCTGAAGCAGCCAG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACTGTGGAAGGCTTGGTaGAGAGAGGGGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRALWKAW*REGAEE
Trigger: CTCCTCAGCCCCCTCTCTCCACCAAGCCTTCCACAG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACAGCTGTGGAAGGCTTaGTGGAGAGAGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAQLWKA*WREGAE
Trigger: CTCAGCCCCCTCTCTCCACCAAGCCTTCCACAGCTG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCAGAGGGCACTGTGGTaGCACTTTTGCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHQRALW*HFCPGP
Trigger: AGGCCCAGGGCAAAAGTGCCACCACAGTGCCCTCTG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGCCCAGAGGGCACTGTaGTGGCACTTTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTAQRAL*WHFCPG
Trigger: CCCAGGGCAAAAGTGCCACCACAGTGCCCTCTGGGC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAAAGGGGCCACTGCTTTaGCCAGGCAGGGCTGTATCG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAKGPLL*PGRAVS
Trigger: CGATACAGCCCTGCCTGGCCAAAGCAGTGGCCCCTT...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGCCGCCCACCGTACTaGTCCATGGAGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHCRPPY*SMELRA
Trigger: TGCCCTCAACTCCATGGACCAGTACGGTGGGCGGCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATGGTCCTATGAGCTGTaGCCCAGCCACACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAWSYEL*PSHTLS
Trigger: GCTCAGGGTGTGGCTGGGCCACAGCTCATAGGACCA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGGGTGGAAAGCCGGTTaGCTTGGCAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTGWKAG*LGRPGS
Trigger: TGAGCCTGGCCTGCCAAGCCAACCGGCTTTCCACCC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGCTCTCCGAGGCAGTaGGGGTGCTGTCCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGSPRQ*GCCPSS
Trigger: TGACGAAGGACAGCACCCCCACTGCCTCGGAGAGCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACTGGGTGTCTGCCTTTaGCTGCAGTGCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRALGVCL*LQCRRP
Trigger: GGGCCTTCTGCACTGCAGCCAAAGGCAGACACCCAG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACCGACCTTGCATCTGTaGCTGAGCCTGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAPTLHL*LSLGVC
Trigger: GCAGACACCCAGGCTCAGCCACAGATGCAAGGTCGG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCGACTGCTGCGGTCCTaGAGCCGCCTGCCGACCTTG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPRLLRS*SRLPTL
Trigger: CAAGGTCGGCAGGCGGCTCCAGGACCGCAGCAGTCG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGCTGCCTCTGTCCGGTaGCACCGAGGGGGACCGTCC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLAASVR*HRGGPS
Trigger: GGACGGTCCCCCTCGGTGTCACCGGACAGAGGCAGC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCCCTGCTACCCATGTTaGGCTCGGCTTGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPPCYPC*ARLGTV
Trigger: CACTGTGCCAAGCCGAGCTCAACATGGGTAGCAGGG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGCTGTACAACACCTGTaGTCTCGCTCTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAAVQHL*SRSGSW
Trigger: CCAGCTCCCAGAGCGAGATCACAGGTGTTGTACAGC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCCTTCGGGTGAGCCTGTaGGGCTCTCCATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTLRVSL*GSPSPA
Trigger: AGCTGGAGATGGAGAGCCTCACAGGCTCACCCGAAG...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCCGGGCCTCATTCCGGTaGGGTCCAGGGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTRASFR*GPGHLP
Trigger: CGGCAGGTGCCCTGGACCTCACCGGAATGAGGCCCG...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGCGCTGAAGACATGGTaGCAGCAGGGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHALKTW*QQGCQS
Trigger: TGATTGGCAGCCCTGCTGTCACCATGTCTTCAGCGC...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCCGGTGTTCCTTGGCTaGGGTATGCCGGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPPVFLG*GMPAWT
Trigger: GGTCCAGGCCGGCATACCTCAGCCAAGGAACACCGG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGGGCCTGTCACCCCTaGACTGTCAAGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHWACHP*TVKLFH
Trigger: GTGGAACAGCTTGACAGTGCAGGGGTGACAGGCCCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATCTGGGCCTGGCACTTaGCTTCTGGGCGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRASGPGT*LLGAVF
Trigger: AAACACAGCGCCCAGAAGGCAAGTGCCAGGCCCAGA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCAGCGACGGCCTCTCCTaGTGGCTTCTGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSDGLS*WLLARW
Trigger: CCACCTGGCCAGAAGCCAGCAGGAGAGGCCGTCGCT...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTCCTCCAGCTGCAGCTaGAGCTGCTGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTSSSCS*SCCCSC
Trigger: GCAACTGCAGCAGCAGCTGCAGCTGCAGCTGGAGGA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCCATCTGTCTGCACACTaGAGTCAGCACTGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTHLSAH*SQHCAA
Trigger: CGCGGCGCAGTGCTGACTGCAGTGTGCAGACAGATG...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACAGGAGGGTAGGTAGGTaGTGGGTATGTGCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHRRVGR*WVCARA
Trigger: GGCCCTAGCACATACCCAGCACCTACCTACCCTCCT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTCCTTGGCTGAGGTATaGCGGCCTGGACCACCCTCA +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTSLAEV*RPGPPS
Trigger: TGAGGGTGGTCCAGGCCGGCATACCTCAGCCAAGGA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGCAGGTGTTGTAGTTaGCTGGGCCCCTGCTACCCA +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHCRCCS*LGPCYP
Trigger: TGGGTAGCAGGGGCCCAGCCAACTACAACACCTGCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCCTGTGGTGGCATTATaGGGAAGGCGCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHPVVAL*GRRLLG
Trigger: ACCCAAGAGGCGCCTTCCCCATAATGCCACCACAGG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTCACCGTGGTGGCAGTaGCCAGGAAGGTATGGGTCT +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHSPWWQ*PGRYGS
Trigger: AGACCCATACCTTCCTGGCCACTGCCACCACGGTGA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGCTTGGCTGCCCTTCTaGGTAGGTGGGGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPAWLPF*VGGVAK
Trigger: CTTGGCAACCCCACCTACCCAGAAGGGCAGCCAAGC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTGCCCACGCTGCTCATaGCCCTCGCAGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGCPRCS*PSQWRR
Trigger: CCGCCGCCACTGCGAGGGCCATGAGCAGCGTGGGCA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTGGTCCTATGAGCTGTaGCCCAGCCACACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTWSYEL*PSHTLS
Trigger: GCTCAGGGTGTGGCTGGGCCACAGCTCATAGGACCA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGAGACTTAGGAGGCTaGCGGCTCACAAGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGDLGG*RLTSCD
Trigger: GTCGCAGCTTGTGAGCCGCCAGCCTCCTAAGTCTCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGGAGACTTAGGAGGCTaGCGGCTCACAAGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTGDLGG*RLTSCD
Trigger: GTCGCAGCTTGTGAGCCGCCAGCCTCCTAAGTCTCC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTCTTGCGCAGCTTGGTaGACTCATGCTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHSCAAW*THAPPA
Trigger: GGCTGGTGGAGCATGAGTCCACCAAGCTGCGCAAGA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCCCACTGACTCCACCTaGCCCCAAAGGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPPTDST*PQRLQP
Trigger: CGGCTGGAGCCTTTGGGGCCAGGTGGAGTCAGTGGG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTGCGCTTTGAGGAGATaGCAGCTGGGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTCALRR*QLGPGS
Trigger: AGAGCCTGGCCCCAGCTGCCATCTCCTCAAAGCGCA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGGCAGCCCGCCGTCCTaGCTCCTCACCAGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLGSPPS*LLTSVA
Trigger: CGCCACGCTGGTGAGGAGCCAGGACGGCGGGCTGCC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATCTTTTTGTCCTCAGTaGAGCCCAGATCCCGCGAGG +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRASFCPQ*SPDPAR
Trigger: CCTCGCGGGATCTGGGCTTCACTGAGGACAAAAAGA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGAGAGCTGTGCAGCTTaGGAGGATCCTGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHESCAA*EDPEAL
Trigger: AAGAGCCTCAGGATCCTCTCAAGCTGCACAGCTCTC...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCAAAAGGTCTGTGGGGTaGCGCAGGTCCGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTKRSVG*RRSVKE
Trigger: CTCCTTCACGGACCTGCGTCACCCCACAGACCTTTT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGCTGCAGGCCCATACTaGGCAAGGTTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPAAGPY*ARFPGL
Trigger: AAGCCCTGGAAACCTTGCTCAGTATGGGCCTGCAGC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGCAGCACATGCTGCTTaGTGGTCTGCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTAAHAA*WSAAPA
Trigger: TGCAGGAGCTGCAGACCATCAAGCAGCATGTGCTGC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCAGCAGCCTTGGATGCTaGCTGGTGTTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTSSLGC*LVFCSA
Trigger: GGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTCGGTGAGGGACTCCTaGAGGAGGCTGCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSVRDS*RRLLWG
Trigger: ACCCCACAGCAGCCTCCTGCAGGAGTCCCTCACCGA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGCTTCTTCTAGGCGCTaGCGGCGGCTGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGASSRR*RRLGLL
Trigger: CAGCAGCCCCAGCCGCCGGCAGCGCCTAGAAGAAGC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGGGTCCCCGGGCCCCTaGCACCTGGCCCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASGSPGP*HLALLS
Trigger: AGACAGCAGGGCCAGGTGGCAGGGGCCCGGGGACCC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGGCCAGCGGGTGTGGTaGAACCCTGGAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGGQRVW*NPGAAA
Trigger: AGCTGCGGCTCCAGGGTTGCACCACACCCGCTGGCC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGCTTCCGGTGCTTGCTaGGCTTTGAGGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTASGAC*ALRRWQ
Trigger: CTGCCATCTCCTCAAAGCGCAGCAAGCACCGGAAGC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGGTGGCTGCGACTGCTaGGGTCCTGGAGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLGGCDC*GPGAAC
Trigger: GCAGGCGGCTCCAGGACCGCAGCAGTCGCAGCCACC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGATGGTGGCTGCGACTaGTGCGGTCCTGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLDGGCD*CGPGAA
Trigger: GGCGGCTCCAGGACCGCAGCAGTCGCAGCCACCATC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGTGCCCGAGGGTGTCTaGCTGGATGATGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPVPEGV*LDDGGC
Trigger: GCAGCCACCATCATCCAGGCAGACACCCTCGGGCAC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCTTCGGCATGGTCTTTaGCTTGGCAGCAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHLRHGL*LGSSLG
Trigger: TCCAAGGCTGCTGCCAAGCCAAAGACCATGCCGAAG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATCTGGGCCAGCTCGGTaGCAGCCGGGGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGSGPAR*QPGEAL
Trigger: GAGGGCCTCCCCCGGCTGCCACCGAGCTGGCCCAGA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGGAGAATCTCTCTTTaGCAGACTCCTCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGRISL*QTPRRW
Trigger: CCACCGCCGAGGAGTCTGCCAAAGAGAGATTCTCCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGAAAGCCGGTTGGCTTaGCAGGCCAGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPESRLA*QARLSW
Trigger: CCAGCTGAGCCTGGCCTGCCAAGCCAACCGGCTTTC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAGGCCTGGCTCCTCATaGGGGGCCGTGCCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWRPGSS*GAVPGH
Trigger: ATGGCCGGGCACGGCCCCCCATGAGGAGCCAGGCCT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACACGTCAGGCATGGAATaGCTGGAGCAGAACTGTGGG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHTSGME*LEQNCG
Trigger: CCCACAGTTCTGCTCCAGCCATTCCATGCCTGACGT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGGTGCCGGTGTTCCTTaGCTGAGGTATGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPGAGVP*LRYAGL
Trigger: CAGGCCGGCATACCTCAGCCAAGGAACACCGGCACC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGGCTGTAGCCGAGCCTaGGATGGAGCCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGGCSRA*DGACWG
Trigger: CCCCCAGCAGGCTCCATCCCAGGCTCGGCTACAGCC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAACTAGCGGGAGCCCCTaGGGTCCCTCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLTSGSP*GPSRPG
Trigger: GCCAGGCCTGGAGGGACCCCAGGGGCTCCCGCTAGT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 72 bp GAGGGCAGTGTGCACCCAAACTCTGTGTATAACGCATaGGAAGCCTGGTGGCCAGGCCACAGGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: EGSVHPNSVYNA*EAWWPGHRRLR
Trigger: CCGCAGCCTCCTGTGGCCTGGCCACCAGGCTTCCAATGCGTTATACACAGAGTTTGGGTGCACACTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCCTGAGAGGCTTGGCCTaGGGGCTGGCCTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTLRGLA*GLALVV
Trigger: GACCACCAAGGCCAGCCCTCAGGCCAAGCCTCTCAG...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTCCTGCTGTTCCCTCTaGCGTCCCCATGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSCCSL*RPHAKE
Trigger: CTCCTTGGCATGGGGACGTCAGAGGGAACAGCAGGA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCTGAGAGTCTGTAGGTaGGCACAGAGGGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPLRVCR*AQRGSR
Trigger: TCGACTTCCCCTCTGTGCTCACCTACAGACTCTCAG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGGCTGCATACAGCTGTaGGGGCACCTGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLGCIQL*GHLASQ
Trigger: CTGGCTGGCCAGGTGCCCTCACAGCTGTATGCAGCC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCGGCTGCATACAGCTGTaGGGGCACCTGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTGCIQL*GHLASQ
Trigger: CTGGCTGGCCAGGTGCCCTCACAGCTGTATGCAGCC...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGGCAGGCACAGCAGCTaGGGCAGGGTAGTCCACATA +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPGRHSS*GRVVHI
Trigger: TATGTGGACTACCCTGCCTCAGCTGCTGTGCCTGCC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCAGGTCAGACTGCTGCTaGCGGTGGGCGGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGRSDCC*RWAGDR
Trigger: CCTATCCCCCGCCCACCGTCAGCAGCAGTCTGACCT...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCGGCCATGCTCAGGGATaGGGGCTTGGAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTGHAQG*GLGARL
Trigger: AAGGCGGGCTCCAAGCCCTCATCCCTGAGCATGGCC...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTGTCTGTGGCTGACGTaGTGCTGTGCCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPCLWLT*CCARGC
Trigger: ACACCCTCGGGCACAGCATCACGTCAGCCACAGACA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCAAGTTGTTCTCTGGCTaGCCAGGGGCTCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPKLFSG*PGALWG
Trigger: ACCCCAAAGAGCCCCTGGGCAGCCAGAGAACAACTT...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCACTCCTGCAGGAGGCTaGTGTGGGGTGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTTPAGG*CGVGRG
Trigger: GCCTCTGCCCACCCCACAGCAGCCTCCTGCAGGAGT...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGTTGCTTGGCTTGCTaGAGGCCCATACTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHCCLAC*RPILSK
Trigger: CTTGCTCAGTATGGGCCTGCAGCAAGCCAAGCAACA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTCTGTATGCCCACGCTaGTCATGGCCCTCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSVCPR*SWPSQW
Trigger: CCACTGCGAGGGCCATGAGCAGCGTGGGCATACAGA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTCGGACAGAGACCGCTaGAGGGTCTTCATGGGGCGA +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSDRDR*RVFMGR
Trigger: TCGCCCCATGAAGACCCTGCAGCGGTCTCTGTCCGA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGTATGGCCCCCATGGTaGCTGAACCGGTCGGAGCGG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGVWPPW*LNRSER
Trigger: CCGCTCCGACCGGTTCAGGCACCATGGGGGCCATAC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGCGTGGCGGCCTGAGTaGCTCCCGTGGTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLAWRPE*LPWSLW
Trigger: CCACAGTGACCACGGGAGGCACTCAGGCCGCCACGC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGGCCCAGTGTGGGCCTaGCGGGAGCCCTTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLGPVWA*REPFLL
Trigger: GAGCAAAAAGGGCTCCCGGCAGGCCCACACTGGGCC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCTGGATGATGGTGGCTaGGACTGCTGCGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPLDDGG*DCCGPG
Trigger: TCCAGGACCGCAGCAGTCGCAGCCACCATCATCCAG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGAGTGTAGCTGCTGCTaGCTCTTGGACCGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPECSCC*LLDRGA
Trigger: TGCGCCTCGGTCCAAGAGCCAGCAGCAGCTACACTC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGCTCCCGGTCCAGGTTaGGATCAGGACCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPAPGPG*DQDLGQ
Trigger: TTGGCCAAGGTCCTGATCCCAACCTGGACCGGGAGC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTCGTGGAAAGCCAGGTaGCCCAGCCGGTTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTSWKAR*PSRFRG
Trigger: CCCTCGGAACCGGCTGGGCCACCTGGCTTTCCACGA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTCTCCTGCTGGCTTCTaGCCAGGTGGTGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSPAGF*PGGGAG
Trigger: CCCGGCCCCACCACCTGGCCAGAAGCCAGCAGGAGA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGTCCAGGAGCCGGTGTaGGGACAGGGGCGACACTGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWVQEPV*GQGRHW
Trigger: CCAGTGTCGCCCCTGTCCCCACACCGGCTCCTGGAC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGCTTCTTGCGCAGCTTaGTGGACTCATGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTASCAA*WTHAPP
Trigger: TGGTGGAGCATGAGTCCACCAAGCTGCGCAAGAAGC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCACTGGCCAGCGGGTGTaGTGCAACCCTGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTTGQRV*CNPGAA
Trigger: TGCGGCTCCAGGGTTGCACCACACCCGCTGGCCAGT...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGGGGCCAGAGGGAGTaGCAGGCACAGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTWGQRE*QAQQLR
Trigger: CCTCAGCTGCTGTGCCTGCCACTCCCTCTGGCCCCA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGGGAACCGGGGCTGTTaGAAGGCAGTGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLGNRGC*KAVGPE
Trigger: CTCTGGCCCCACTGCCTTCCAACAGCCCCGGTTCCC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCAGGGTAGGTAGGTGCTaGGTATGTGCTAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTRVGRC*VCARAS
Trigger: ACTGGCCCTAGCACATACCCAGCACCTACCTACCCT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCGGGATACGTGGGGGCTaGGCTCTGGCTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTGIRGG*ALAHAA
Trigger: AGCAGCGTGAGCCAGAGCCCAGCCCCCACGTATCCC...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCAAAGGCTCCAGCCGCTaGCTCTCCGAGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLKGSSR*LSEAVG
Trigger: CCCCACTGCCTCGGAGAGCCAGCGGCTGGAGCCTTT...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTAGGCCTGGCTCCTCATaGGGGGCCGTGCCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASRPGSS*GAVPGH
Trigger: ATGGCCGGGCACGGCCCCCCATGAGGAGCCAGGCCT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCACGTCAGGCATGGAATaGCTGGAGCAGAACTGTGGG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTTSGME*LEQNCG
Trigger: CCCACAGTTCTGCTCCAGCCATTCCATGCCTGACGT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTGGCTGTAGCCGAGCCTaGGATGGAGCCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSGCSRA*DGACWG
Trigger: CCCCCAGCAGGCTCCATCCCAGGCTCGGCTACAGCC...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 72 bp AGATGGTGCGAGGACCATCCCTATGAAGTGAGTGTGTaGAGGCCTTGCGTGGGCAGAGGAGGGTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RWCEDHPYEVSV*RPCVGRGGCPC
Trigger: GCAAGGGCACCCTCCTCTGCCCACGCAAGGCCTCAACACACTCACTTCATAGGGATGGTCCTCGCACCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTTTCGGCCTCCTGGCCTaGTGGGCCTTGGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRFGLLA*WALGPC
Trigger: ACAAGGGCCCAAGGCCCATCAGGCCAGGAGGCCGAA...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCCGAGGGGGACCGTCCTaGTCTCTGTGTCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTRGGPS*SLCPAV
Trigger: GACAGCAGGACACAGAGATCAGGACGGTCCCCCTCG...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCGCACACGGGGCTACCTaGACCCTGGCCAAAGTCGAG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTAHGAT*TLAKVE
Trigger: CTCGACTTTGGCCAGGGTTCAGGTAGCCCCGTGTGC...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCCGCTGCAGTGCAAACTaGGCCTGGCGCTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGRCSAN*AWRSSC
Trigger: GCAGGAAGAGCGCCAGGCTCAGTTTGCACTGCAGCG...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGGTCGGTGGCAGCCGTaGTGTGGATGGCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGGRWQP*CGWLER
Trigger: TCTCTCCAGCCATCCACATCACGGCTGCCACCGACC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTTCTGGGGACTCACATaGGCCTTGTTCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTFWGLT*ALFSLS
Trigger: TGAGAGGCTGAACAAGGCTCATGTGAGTCCCCAGAA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCCCCGCGGTCCGTCCTTaGCATGTTCCTGGACGTCAG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGPAVRP*HVPGRQ
Trigger: CTGACGTCCAGGAACATGTCAAGGACGGACCGCGGG...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCCCGCGGTCCGTCCTTaGCATGTTCCTGGACGTCAG +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLPAVRP*HVPGRQ
Trigger: CTGACGTCCAGGAACATGTCAAGGACGGACCGCGGG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCCCGCACTGCTGCTGCTaGGGGGTGGCTTGCTCCATT +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTPHCCC*GVACSI
Trigger: AATGGAGCAAGCCACCCCGCAGCAGCAGCAGTGCGG...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCATGCCTCAGCTGGCTaGCAAAGTCATCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHHASAG*QSHLKT
Trigger: AGTCTTCAGATGACTTTGGCAGCCAGCTGAGGCATG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTCTACTTGCTTGACCTaGGCCAGGCACACGGGGCTA +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSTCLT*ARHTGL
Trigger: TAGCCCCGTGTGCCTGGCGCAGGTCAAGCAAGTAGA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCATAAGGCCTGTACATaGCACCACGCACCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPHKACT*HHAPWA
Trigger: GGCCCATGGTGCGTGGTGGCATGTACAGGCCTTATG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTGCTGCTTGATGGTCTaGAGCTCCTGCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPCCLMV*SSCSSR
Trigger: GCGAGAGCTGCAGGAGCTGCAGACCATCAAGCAGCA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCGTGTCCGCTTCACCTTaGGGACCAGGCCGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTVSASP*GPGRWV
Trigger: CACCCAACGGCCTGGTCCGCAAGGTGAAGCGGACAC...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCCCGCCAACCCTCGCTaGAGCAGACTGGCTGCATAC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLPANPR*SRLAAY
Trigger: GTATGCAGCCAGTCTGCTGCAGCGAGGGTTGGCGGG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCATTCTTCCTCACCTCTaGCATAGCAGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTILPHL*HSSRAE
Trigger: CTCTGCCCTGCTGCTATGGCAGAGGTGAGGAAGAAT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCCCGGCCATGGGCCATaGTCAGGGATGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWPGHGP*SGMRAW
Trigger: CCAAGCCCTCATCCCTGAGCATGGCCCATGGCCGGG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTACCCGGCCATGGGCCATaGTCAGGGATGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLPGHGP*SGMRAW
Trigger: CCAAGCCCTCATCCCTGAGCATGGCCCATGGCCGGG...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCGCGTGGCGGCCTGAGTaGCTCCCGTGGTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVAWRPE*LPWSLW
Trigger: CCACAGTGACCACGGGAGGCACTCAGGCCGCCACGC...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTCCCATGTCCCGAGCGTaGGGTTTGGCAGCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASPMSRA*GLAARR
Trigger: ACGGCGGGCTGCCAAACCGCACGCTCGGGACATGGG...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGGCCCAGTGTGGGCCTaGCGGGAGCCCTTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWGPVWA*REPFLL
Trigger: GAGCAAAAAGGGCTCCCGGCAGGCCCACACTGGGCC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTGGTCCTGGAGCCGCCTaGCGACCTTGCATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSGPGAA*RPCICG
Trigger: GCCACAGATGCAAGGTCGGCAGGCGGCTCCAGGACC...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGATGGTGGCTGCGACTaGTGCGGTCCTGGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASDGGCD*CGPGAA
Trigger: GGCGGCTCCAGGACCGCAGCAGTCGCAGCCACCATC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGTGTTGAAGTTTGGCTaGCTGGGGGTTGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPVLKFG*LGVDVR
Trigger: CCTCACATCAACCCCCAGCCAGCCAAACTTCAACAC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTACTCGGCTTGGCACAGTaGGCAGGCGGAGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLLGLAQ*AGGGPF
Trigger: GAAAGGGCCTCCGCCTGCCCACTGTGCCAAGCCGAG...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCTGGTGGCCTGGGGGCTaGCCTTGGCAGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGWWPGG*PWQAGS
Trigger: GCTCCCTGCCTGCCAAGGCCAGCCCCCAGGCCACCA...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTCGGACTGGCTGTGGTaGCTGGTGACCCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTSDWLW*LVTQDP
Trigger: AGGGTCCTGGGTCACCAGCCACCACAGCCAGTCCGA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTATTCCAGGAGGGCCACTaGGAGCGTGGGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLFQEGH*ERGAAP
Trigger: AGGAGCTGCCCCACGCTCCCAGTGGCCCTCCTGGAA...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACCCTGGGTCTTCCCCTaGGCCCACCTCGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAPWVFP*AHLGTG
Trigger: CCCCGTACCGAGGTGGGCCCAGGGGAAGACCCAGGG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTCTCTCGGGCTGTGGTaGCACTGTACTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGSLGLW*HCTGPG
Trigger: GCCTGGCCCAGTACAGTGCCACCACAGCCCGAGAGA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTATGTCTGAGGCGGAGCTaGGGAGGCCCCTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLCLRRS*GGPCAA
Trigger: TGCTGCACAGGGGCCTCCCCAGCTCCGCCTCAGACA...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCAGAGTAGAGCACTTGTaGAGACTTAGGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTRVEHL*RLRRLA
Trigger: CGCCAGCCTCCTAAGTCTCCACAAGTGCTCTACTCT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGACCAGGCCGTTGGGTaGCAGCGCCGACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASDQAVG*QRRHLA
Trigger: AGCCAGGTGTCGGCGCTGCCACCCAACGGCCTGGTC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCCCTGGAGCCGCAGCTaGTTGAGCTCGCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLPWSRS*LSSLSD
Trigger: GTCTGACAGCGAGCTCAACCAGCTGCGGCTCCAGGG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAAAGGGGCGCTCTGCGTaGTTGGCATGGGCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLKGRSA*LAWALG
Trigger: CCCCAACGCCCATGCCAACCACGCAGAGCGCCCCTT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTAAGGGGCGCTCTGCGTaGTTGGCATGGGCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSKGRSA*LAWALG
Trigger: CCCCAACGCCCATGCCAACCACGCAGAGCGCCCCTT...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCTTAGAGGGATGCTTTaGCCCCATGGGTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPLRGML*PHGSWT
Trigger: GGTCCAGGACCCATGGGGCCAAAGCATCCCTCTAAG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCCCTTGGCCTCCTCGATaGGTGAGAACTTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTPWPPR*VRTWRS
Trigger: AGATCTCCAAGTTCTCACCCATCGAGGAGGCCAAGG...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATGCTATAGTCATGGCTaGACAGCTTCTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRACYSHG*TASPHC
Trigger: ACAGTGGGGAGAAGCTGTCCAGCCATGACTATAGCA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCTGGAGCAGAACTGTaGGCAGGTGTCCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWAGAEL*AGVPGR
Trigger: CCTCCCGGGGACACCTGCCCACAGTTCTGCTCCAGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCAGGCATGGAATGGCTaGAGCAGAACTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPQAWNG*SRTVGR
Trigger: CCTGCCCACAGTTCTGCTCCAGCCATTCCATGCCTG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCATGGTAGCTGTGCCTaGCAGGGCCTCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLHGSCA*QGLASG
Trigger: CCCAGAAGCGAGGCCCTGCCAGGCACAGCTACCATG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGGCTCCTCACCAGCGTaGCGGCCTGAGTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHGSSPA*RPECLP
Trigger: CGGGAGGCACTCAGGCCGCCACGCTGGTGAGGAGCC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGACCCTTCTTCTGCATaGCAGGGGCAGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLDPSSA*QGQGWP
Trigger: AGGCCAGCCCTGCCCCTGCCATGCAGAAGAAGGGTC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACACGTGGCGGTCCTGCTaGCTGGGGCCCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHTWRSC*LGPWGC
Trigger: ACAGCCCCAGGGCCCCAGCCAGCAGGACCGCCACGT...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTGGGGACAGAGTAGGGTaGCGTGGGAGTGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRGDRVG*RGSAAS
Trigger: AGAGGCAGCACTCCCACGTCACCCTACTCTGTCCCC...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGCTCCAGCTGCTCGGTaGGGGACTCCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGAPAAR*GTPAGG
Trigger: GCCTCCTGCAGGAGTCCCTCACCGAGCAGCTGGAGC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTACCTGCTCTACTTGCTTaGCCTGCGCCAGGCACACGG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLPALLA*PAPGTR
Trigger: CCGTGTGCCTGGCGCAGGTCAAGCAAGTAGAGCAGG...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTAGGCAGGCTGGGTGGTaGTGGGCAGCGTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSRQAGW*WAALQQ
Trigger: TTGCTGCAACGCTGCCCATCACCACCCAGCCTGCCT...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCAGGTCAGACTGCTGCTaGCGGTGGGCGGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVRSDCC*RWAGDR
Trigger: CCTATCCCCCGCCCACCGTCAGCAGCAGTCTGACCT...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAACCAGCGTGGCGGCCTaGGTGCCTCCCGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAETSVAA*VPPVVT
Trigger: AGTGACCACGGGAGGCACTCAGGCCGCCACGCTGGT...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGTCCTGCTGTCTACCTaGAGCGTCCTGCGGGGACTT +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLVLLST*SVLRGL
Trigger: AAGTCCCCGCAGGACGCTGCAGGTAGACAGCAGGAC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCTGCTTCAGAGGGGCTaGTCCAGCTGCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWLLQRG*SSCSVR
Trigger: CCTCACCGAGCAGCTGGAGCAGCCCCTCTGAAGCAG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGTGCTTCGAATTCGCTaGTGTTCCACCTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPVLRIR*CSTSRI
Trigger: GATGCGGGAGGTGGAACAGCAGCGAATTCGAAGCAC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCGATGGAAGGTGCCAGTaGAGCTACTGCCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTDGRCQ*SYCQKE
Trigger: TTCCTTTTGGCAGTAGCTGCACTGGCACCTTCCATC...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGTAGAAGGGGCCACTaGTTTGGCCAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTCRRGH*FGQAGL
Trigger: CAGCCCTGCCTGGCCAAAGCAGTGGCCCCTTCTACA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGCCCACCACTCCCGCTaGCATGCCGCCCACCGTACT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEAHHSR*HAAHRT
Trigger: AGTACGGTGGGCGGCATGGCAGCGGGAGTGGTGGGC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAAGCAGCTGCTCCTGTTaGTTCCGCTGCCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLSSCSC*FRCRSS
Trigger: GGAGGACCGGCAGCGGAAGCAACAGGAGCAGCTGCT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTCCTGCAGCTCTCGCTaGACCAGCAGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSCSSR*TSSCSS
Trigger: GGAGGAGCAGCTGCTGGTGCAGCGAGAGCTGCAGGA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGCCTGGCGCTCTTCCTaGTGCTGCTGCAGCACATGC +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLAWRSS*CCCSTC
Trigger: GCATGTGCTGCAGCAGCAGCAGGAAGAGCGCCAGGC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCCCGCCAACCCTCGCTaGAGCAGACTGGCTGCATAC +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSPANPR*SRLAAY
Trigger: GTATGCAGCCAGTCTGCTGCAGCGAGGGTTGGCGGG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAGGCCAGCGGGTGTGGTaGAACCCTGGAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAGQRVW*NPGAAA
Trigger: AGCTGCGGCTCCAGGGTTGCACCACACCCGCTGGCC...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCAGATCTTTTGCTCCATaGCTTGCTTCCGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTRSFAP*LASGAC
Trigger: GCAAGCACCGGAAGCAAGGCATGGAGCAAAAGATCT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCTGACGTGATGCTGTaGCCGAGGGTGTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWADVML*PRVSAW
Trigger: CCAGGCAGACACCCTCGGGCACAGCATCACGTCAGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCGAGGTCTTGCATATTaGACACAGGGTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPRGLAY*TQGAAG
Trigger: CCCAGCAGCACCCTGTGTCCAATATGCAAGACCTCG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTCCCCAGAGGCTGTTTaGCTGGGGAGTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSPEAV*LGSGQE
Trigger: CTCCTGCCCACTCCCCAGCCAAACAGCCTCTGGGGA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGGGAAGGCTGGCCCTaGGTGTCAGCCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGEGWP*VSASGC
Trigger: GCAGCCAGAGGCTGACACCCAGGGCCAGCCTTCCCC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGCATGGTCTTTGGCTTaGCAGCAGCCTTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPAWSLA*QQPWML
Trigger: CAGCATCCAAGGCTGCTGCCAAGCCAAAGACCATGC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGGGGCTGGGTGGACGTaGGCCTGTCACCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHGAGWT*ACHPCT
Trigger: AGTGCAGGGGTGACAGGCCCACGTCCACCCAGCCCC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTAGCACTGGGTGCTCGTaGAAAGCCAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSTGCS*KARWPS
Trigger: GCTGGGCCACCTGGCTTTCCACGAGCACCCAGTGCT...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTTCAGGCCCACACCCTaGGCGGTGCCCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASFRPTP*AVPIWV
Trigger: CACCCAGATGGGCACCGCCCAGGGTGTGGGCCTGAA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGCGCTAGGGGCAGGATaGAAGGTGCCAGTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGALGAG*KVPVQL
Trigger: TAGCTGCACTGGCACCTTCCATCCTGCCCCTAGCGC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGTGGTGGCACTGTACTaGGCCAGGCTGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASVVALY*ARLASW
Trigger: CCAGGAGGCCAGCCTGGCCCAGTACAGTGCCACCAC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTTGCTCGGGCTCGGTCTaGACGGAGCAGTCGCTGATG +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRCSGSV*TEQSLM
Trigger: CATCAGCGACTGCTCCGTCCAGACCGAGCCCGAGCA...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGTGGCAGCCGTGATGTaGATGGCTGGAGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGVAAVM*MAGETL
Trigger: CAGGGTCTCTCCAGCCATCCACATCACGGCTGCCAC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCTCTGCCCAGGGCTCCTaGGGTGACTATCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLSAQGS*GDYLDA
Trigger: GGCATCCAGATAGTCACCCCAGGAGCCCTGGGCAGA...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCCTGCAGTGTACTGTaGGGCTGCAGGTGGGAACCG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWACSVL*GCRWEP
Trigger: CGGTTCCCACCTGCAGCCCCACAGTACACTGCAGGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAAAAGGCTCCAGCCGCTaGCTCTCCGAGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGKGSSR*LSEAVG
Trigger: CCCCACTGCCTCGGAGAGCCAGCGGCTGGAGCCTTT...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCCCACTGACTCCACCTaGCCCCAAAGGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVPTDST*PQRLQP
Trigger: CGGCTGGAGCCTTTGGGGCCAGGTGGAGTCAGTGGG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCTGCTATAGTCATGGCTaGACAGCTTCTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPCYSHG*TASPHC
Trigger: ACAGTGGGGAGAAGCTGTCCAGCCATGACTATAGCA...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTCAGGGATGAGGGCTTaGAGCCCGCCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSGMRA*SPPFEV
Trigger: GACTTCAAAAGGCGGGCTCCAAGCCCTCATCCCTGA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTCACGCTTATACGCGTaGGCCCGCGGTCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSRLYA*ARGPSL
Trigger: CAAGGACGGACCGCGGGCCCACGCGTATAAGCGTGA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCATGGTAGCTGTGCCTaGCAGGGCCTCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSHGSCA*QGLASG
Trigger: CCCAGAAGCGAGGCCCTGCCAGGCACAGCTACCATG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTGGTGCCGGTGTTCCTTaGCTGAGGTATGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSGAGVP*LRYAGL
Trigger: CAGGCCGGCATACCTCAGCCAAGGAACACCGGCACC...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTCCTGAGTGCCTCCCGTaGTCACTGTGGTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRPECLP*SLWCRC
Trigger: ACACCGGCACCACAGTGACCACGGGAGGCACTCAGG...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGGTTTCCCCGCTGGTTaGCTGGCAGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGGFPAG*LAAGAV
Trigger: CACAGCCCCTGCTGCCAGCCAACCAGCGGGGAAACC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCTCTCCTTCTGCCCCTaGCTGACTAGCGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVLSFCP*LTSGSP
Trigger: GGGGCTCCCGCTAGTCAGCCAGGGGCAGAAGGAGAG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCCGAAGGCCTCGGGCGTaGTGGACAGGGAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRRPRA*WTGSED
Trigger: GTCCTCACTCCCTGTCCATCACGCCCGAGGCCTTCG...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCCAGTTCCAGGTACTTaGGCTTGGCGTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPPVPGT*AWRQSP
Trigger: AGGAGATTGACGCCAAGCTCAAGTACCTGGAACTGG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGGCAGGCACAGCAGCTaGGGCAGGGTAGTCCACATA +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWGRHSS*GRVVHI
Trigger: TATGTGGACTACCCTGCCTCAGCTGCTGTGCCTGCC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGCGCTGAAGACATGGTaGCAGCAGGGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGALKTW*QQGCQS
Trigger: TGATTGGCAGCCCTGCTGTCACCATGTCTTCAGCGC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTCCTCCTGGCCCAGGTaGTACGCTTCGCTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGSSWPR*YASLSE
Trigger: TTCTGACAGCGAAGCGTATCACCTGGGCCAGGAGGA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTGGACCACCCTCATCATaGGGCCATAGGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSGPPSS*GHRPSS
Trigger: TGAGGAGGGCCTATGGCCTCATGATGAGGGTGGTCC...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGACTGGGGTACCCGGGCTaGCCCTTCTTCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGLGYPG*PFFCMA
Trigger: TGCCATGCAGAAGAAGGGTCAGCCCGGGTACCCCAG...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCAGCCCGGGACGACTGTaGATAATCAGCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLSPGRL*IISRAG
Trigger: CCCAGCTCTGCTGATTATTCACAGTCGTCCCGGGCT...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGTGGTTGGCTGGCTCTaGGGCTGTAGCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHVVGWL*GCSRAW
Trigger: CCAGGCTCGGCTACAGCCTCAGAGCCAGCCAACCAC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGGCAGCGCCGACACATaGGCCTTGTTCAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWGSADT*ALFSLS
Trigger: TGAGAGGCTGAACAAGGCTCATGTGTCGGCGCTGCC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACAGCTGTTCCACTTCTTaGTGTACAACACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHSCSTS*CTTPVI
Trigger: GATCACAGGTGTTGTACAGCAAGAAGTGGAACAGCT...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCGCGCCTTGCGCTGCTaGTTTGCTTCTTCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWRALRC*FASSRR
Trigger: GCGCCTAGAAGAAGCAAAGCAGCAGCGCAAGGCGCG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGCCGCGCCTTGCGCTaGTGCTTTGCTTCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTCRALR*CFASSR
Trigger: CCTAGAAGAAGCAAAGCAGCAGCGCAAGGCGCGGCA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTCCATCTCCGCTGCCTaGCTCAGCTCCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSISAA*LSSSVG
Trigger: CCCTACAGAGGAGCTGAGGCAGGCAGCGGAGATGGA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCCCGGCTGAGAAGCCCTaGCGCCATAGTCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTPAEKP*RHSHGL
Trigger: AAGACCATGACTATGGCGGCAGGGCTTCTCAGCCGG...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACCCTGGGGCCCAGCTTaGCTGGTGAGAATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEPWGPA*LVRMWG
Trigger: GCCCCACATTCTCACCAGGCAAGCTGGGCCCCAGGG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCTGTGTAGAGAACTCTaGTGTGGCCCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWLCREL*CGPGAQ
Trigger: CTGGGCCCCAGGGCCACAGCAGAGTTCTCTACACAG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGTACCAGCACTGGGTaGTCGTGGAAAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTCTSTG*SWKARW
Trigger: CCACCTGGCTTTCCACGAGCACCCAGTGCTGGTACA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCTCCTGGAAGCCAACTaGATCTCCCCGTGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSLLEAN*ISPWAV
Trigger: TACGGCCCACGGGGAGATGCAGTTGGCTTCCAGGAG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATCCTCACGATGCCTCTaGAGCTCCACCCTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGSSRCL*SSTLSR
Trigger: GCGGGAGAGGGTGGAGCTGCAGAGGCATCGTGAGGA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGATGCCACTACGGCCTaGCTCCCACTGCTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGDATTA*LPLLLG
Trigger: ACCGAGGAGCAGTGGGAGGCAGGCCGTAGTGGCATC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCGGGCGAGGCAGAGTCTaGTGGCGAAGGGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVGRGRV*WRRVLS
Trigger: TGACAGCACCCTTCGCCAGCAGACTCTGCCTCGCCC...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAGCTTGGTGGACTCATaGTCCACCAGCCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSLVDS*STSRRS
Trigger: GGACCTGCGGCTGGTGGAGCATGAGTCCACCAAGCT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTGGTCCACTACTGCCTaGAGTGTACTGTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGWSTTA*SVLWGC
Trigger: GCAGCCCCACAGTACACTGCAGGCAGTAGTGGACCA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGGTCCACTACTGCCTaGAGTGTACTGTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTWSTTA*SVLWGC
Trigger: GCAGCCCCACAGTACACTGCAGGCAGTAGTGGACCA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCGCCAGTGTAGGTAGGTaGCTGGTGGGCTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTASVGR*LVGWKS
Trigger: GGATTTCCAGCCCACCAGGCACCTACCTACACTGGC...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCATTCTTCCTCACCTCTaGCATAGCAGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPILPHL*HSSRAE
Trigger: CTCTGCCCTGCTGCTATGGCAGAGGTGAGGAAGAAT...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGCTTCCGGTGCTTGCTaGGCTTTGAGGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGASGAC*ALRRWQ
Trigger: CTGCCATCTCCTCAAAGCGCAGCAAGCACCGGAAGC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCAACTTGGAGATCTTTTaGTCCATGCCTTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTNLEIF*SMPCFR
Trigger: CCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTATCCTTGGCTGAGGTATaGCGGCCTGGACCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLSLAEV*RPGPPS
Trigger: TGAGGGTGGTCCAGGCCGGCATACCTCAGCCAAGGA...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGTCCTGGAGCCGCCTaGCGACCTTGCATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGPGAA*RPCICG
Trigger: GCCACAGATGCAAGGTCGGCAGGCGGCTCCAGGACC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTGGCCTGATGGGCCTTaGGCCCTTGTCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHWPDGP*ALVSRG
Trigger: CCCCCGAGAGACAAGGGCCCAAGGCCCATCAGGCCA...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGGTTGCCCCTTGCTTaGGGAAGGCTGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGLPLA*GRLALG
Trigger: ACCCAGGGCCAGCCTTCCCCAAGCAAGGGGCAACCC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAATGTTGAGCTCGGCTTaGCACAGTGGGCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLMLSSA*HSGQAE
Trigger: CTCCGCCTGCCCACTGTGCCAAGCCGAGCTCAACAT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCATATTCAAAGGAGCCCTaGCTGCGGGGGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAYSKEP*LRGPVG
Trigger: GCCCACGGGCCCCCGCAGCCAGGGCTCCTTTGAATA...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGGAGTCTGTGTGCCTTaGGCTACCATGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGGVCVP*ATMGEG
Trigger: CCCCTCCCCCATGGTAGCCCAAGGCACACAGACTCC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGTATGGGTCTGCTCTTaGGCATTGAGGTTGATAACC +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPVWVCS*ALRLIT
Trigger: GGTTATCAACCTCAATGCCCAAGAGCAGACCCATAC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTCTCTGGCACTGGTCCTaGCTTCAGGCCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASLWHWS*LQAHTL
Trigger: CAGGGTGTGGGCCTGAAGCCAGGACCAGTGCCAGAG...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGCCCTTCTGGGTAGGTaGGGTTGCCAAGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGALLGR*GCQGGR
Trigger: CCGGCCTCCTTGGCAACCCCACCTACCCAGAAGGGC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAGTACCGAGGCAGGCTaGGTGGTGATGGGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSTEAG*VVMGSV
Trigger: AACGCTGCCCATCACCACCCAGCCTGCCTCGGTACT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTAGCGGTGGCCAGTACTaGCCATTCTGGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASSGGQY*PFWASS
Trigger: CGAGCTGGCCCAGAATGGCCAGTACTGGCCACCGCT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGGGGCTGATGGCAGTTaGTCCTATGAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLGADGS*SYELWP
Trigger: GGGCCACAGCTCATAGGACCAACTGCCATCAGCCCC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTCTGCCCAGGGCTCCTaGGGTGACTATCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSAQGS*GDYLDA
Trigger: GGCATCCAGATAGTCACCCCAGGAGCCCTGGGCAGA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCAGAGTAGAGCACTTGTaGAGACTTAGGAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPRVEHL*RLRRLA
Trigger: CGCCAGCCTCCTAAGTCTCCACAAGTGCTCTACTCT...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCTGCAGGGTCTTCATaGGGCGAGGCAGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWAAGSS*GEAESA
Trigger: AGCAGACTCTGCCTCGCCCCATGAAGACCCTGCAGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCCTCGCTGCAGCAGACTaGCTGCATACAGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGLAAAD*LHTAVR
Trigger: CCTCACAGCTGTATGCAGCCAGTCTGCTGCAGCGAG...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGGCCACCCCGGTCTTTaGCCAACGACTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGGHPGL*PTTPCA
Trigger: AGCGCAAGGAGTCGTTGGCCAAAGACCGGGGTGGCC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAGGGAACCGGGGCTGTTaGAAGGCAGTGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAGNRGC*KAVGPE
Trigger: CTCTGGCCCCACTGCCTTCCAACAGCCCCGGTTCCC...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCGCCTGCAGTGTACTGTaGGGCTGCAGGTGGGAACCG +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVACSVL*GCRWEP
Trigger: CGGTTCCCACCTGCAGCCCCACAGTACACTGCAGGC...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGAAAGCCGGTTGGCTTaGCAGGCCAGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASESRLA*QARLSW
Trigger: CCAGCTGAGCCTGGCCTGCCAAGCCAACCGGCTTTC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGGTTGGCATGGGCGTTaGGGCTGCGTAATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLGWHGR*GCVMAC
Trigger: ACAGGCCATTACGCAGCCCCAACGCCCATGCCAACC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGACTGTATGGCCCCCATaGTGCCTGAACCGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWTVWPP*CLNRSE
Trigger: CTCCGACCGGTTCAGGCACCATGGGGGCCATACAGT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTCTCTCAGAGGCATGGTaGTATGCTGACGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRLSEAW*YADGAR
Trigger: CCGGGCTCCGTCAGCATACCACCATGCCTCTGAGAG...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGCAGAAGGCCCAGTGTaGGCCTGCCGGGAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGAEGPV*ACREPF
Trigger: AAAGGGCTCCCGGCAGGCCCACACTGGGCCTTCTGC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCCGACCTTGCATCTGTaGCTGAGCCTGGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSPTLHL*LSLGVC
Trigger: GCAGACACCCAGGCTCAGCCACAGATGCAAGGTCGG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGGTTTCCCCGCTGGTTaGCTGGCAGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHGFPAG*LAAGAV
Trigger: CACAGCCCCTGCTGCCAGCCAACCAGCGGGGAAACC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 72 bp TGGGGCCCGCCTGCTGGGAATCTTTGGGCCAAAGGTTaGCCAGCTTGTAGATGCGTTATACGCAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WGPPAGNLWAKG*PACRCVIRRVQ
Trigger: CTGGACTCTGCGTATAACGCATCTACAAGCTGGCAAACCTTTGGCCCAAAGATTCCCAGCAGGCGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCCGCCTGGGTCAGCAGTaGTGCTCCAAGGCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRLGQQ*CSKAEE
Trigger: CTCTTCGGCCTTGGAGCATCACTGCTGACCCAGGCG...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAGGAGCCGCAGCTGGTTaGGCTCGCTGTCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAGAAAG*ARCQTG
Trigger: ACCTGTCTGACAGCGAGCTCAACCAGCTGCGGCTCC...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGGAGCCGCAGCTGGTTaGGCTCGCTGTCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEGAAAG*ARCQTG
Trigger: ACCTGTCTGACAGCGAGCTCAACCAGCTGCGGCTCC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCTGGGGTACCCGGGCTaGCCCTTCTTCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHLGYPG*PFFCMA
Trigger: TGCCATGCAGAAGAAGGGTCAGCCCGGGTACCCCAG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAAGCCCGGGACGACTGTaGATAATCAGCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLSPGRL*IISRAG
Trigger: CCCAGCTCTGCTGATTATTCACAGTCGTCCCGGGCT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTGTTGTGTCTGTGGCTaGCGTGATGCTGTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWCCVCG*RDAVPE
Trigger: CTCGGGCACAGCATCACGTCAGCCACAGACACAACA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCTGATCTCTGTGTCCTaGTGTCTACCTGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLLISVS*CLPAAS
Trigger: GGACGCTGCAGGTAGACAGCAGGACACAGAGATCAG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAGTGACGTGGGAGTGCTaGCTCTGTCCGGTGACACCG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAVTWEC*LCPVTP
Trigger: CGGTGTCACCGGACAGAGGCAGCACTCCCACGTCAC...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGGAGCTTGCAGGCAGTaGAGGTGTTGTAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGGACRQ*RCCSWL
Trigger: CAGCCAACTACAACACCTGCACTGCCTGCAAGCTCC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGCACACCTGGAGCTTaGAGGCAGTGCAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTCTPGA*RQCRCC
Trigger: ACAACACCTGCACTGCCTGCAAGCTCCAGGTGTGCA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCTTCACCCCACTTTTTaGTTTAGGAGTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPLHPTF*FRSPRR
Trigger: CCTCCTGGGACTCCTAAAGCAAAAAGTGGGGTGAAG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCCTCTGACGTCCCCATaGCAAGGAGTCGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVPLTSP*QGVVLL
Trigger: GAGGAGGACGACTCCTTGGCATGGGGACGTCAGAGG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCCTGCCACCTGGCCCTaGTGTCTCTGGAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVPATWP*CLWSIS
Trigger: TGAGATGCTCCAGAGACAGCAGGGCCAGGTGGCAGG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCCGCATCCGGGCTATaGTCTGGGATGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWAASGL*SGMSEG
Trigger: TCCTTCAGACATCCCAGAGCATAGCCCGGATGCGGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGGGCAGGATGGAAGGTaGCAGTGCAGCTACTGCCAA +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWGQDGR*QCSYCQ
Trigger: TTGGCAGTAGCTGCACTGGCACCTTCCATCCTGCCC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCGCTGCACCAGCAGCTaGTCCTCCTCACGATGCCTC +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHRCTSS*SSSRCL
Trigger: GAGGCATCGTGAGGAGGAGCAGCTGCTGGTGCAGCG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCTGCTCACGCTGCAGTaGAAACTGAGCCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVLLTLQ*KLSLAL
Trigger: GAGCGCCAGGCTCAGTTTGCACTGCAGCGTGAGCAG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCGCTGCTGTGCCAGCTaGTCACGCTGCAGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVRCCAS*SRCSAN
Trigger: GTTTGCACTGCAGCGTGAGCAGCTGGCACAGCAGCG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCACTCCGCCTGCTTCTTaGGCAGCTTGGTGGACTCAT +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTTPPAS*AAWWTH
Trigger: ATGAGTCCACCAAGCTGCGCAAGAAGCAGGCGGAGT...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTCGTCCAACTCCGCCTaGTTCTTGCGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSSNSA*FLRSLV
Trigger: CACCAAGCTGCGCAAGAAGCAGGCGGAGTTGGACGA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTGCCAGTGTAGGTAGGTaGCTGGTGGGCTGGAAATCC +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRASVGR*LVGWKS
Trigger: GGATTTCCAGCCCACCAGGCACCTACCTACACTGGC...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGCACGACTGTCAGCTTaGACTGGGAAAGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASARLSA*TGKGAL
Trigger: GAGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTACCCTGCTCATAGCTaGCGCTCACAGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWYPAHS*RSQLDH
Trigger: GTGGTCCAGCTGTGAGCGGCAGCTATGAGCAGGGTA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTTACCCTGCTCATAGCTaGCGCTCACAGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRYPAHS*RSQLDH
Trigger: GTGGTCCAGCTGTGAGCGGCAGCTATGAGCAGGGTA...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCAGATCTTTTGCTCCATaGCTTGCTTCCGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPRSFAP*LASGAC
Trigger: GCAAGCACCGGAAGCAAGGCATGGAGCAAAAGATCT...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCCATCCTGGAACTTTCTaGCCCGAGAGGTCAGACTGC +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGHPGTF*PERSDC
Trigger: GCAGTCTGACCTCTCGGGGCAGAAAGTTCCAGGATG...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGCTGACGTGATGCTGTaGCCGAGGGTGTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEADVML*PRVSAW
Trigger: CCAGGCAGACACCCTCGGGCACAGCATCACGTCAGC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGCCTGGGCTCAGCTGTaGAAGGCTTGGTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGAWAQL*KAWWRE
Trigger: CTCTCTCCACCAAGCCTTCCACAGCTGAGCCCAGGC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCGCCTTGGATGCTGCCTaGTGTTCTGCTCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVALDAA*CSALPC
Trigger: GCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGC...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTACACAGGTTGCACACCTaGAGCTTGCAGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLHRLHT*SLQAVQ
Trigger: CTGCACTGCCTGCAAGCTCCAGGTGTGCAACCTGTG...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTCTCGCTCTGGGAGCTaGAGACACCGTCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASSRSGS*RHRRRS
Trigger: ACTCCTCCGACGGTGTCTCCAGCTCCCAGAGCGAGA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCAGAACTGGGCGTGGTaGAACTGCCCGAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVQNWAW*NCPKGS
Trigger: AGACCCCTTCGGGCAGTTCCACCACGCCCAGTTCTG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGGTGACCCAGGACCCTaGGAGAAGGTCATGCCTACC +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGGDPGP*EKVMPT
Trigger: GGTAGGCATGACCTTCTCCCAGGGTCCTGGGTCACC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCCTCGTGTCGGACTaGCTGTGGTGGCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGTLVSD*LWWLVT
Trigger: GGTCACCAGCCACCACAGCCAGTCCGACACGAGGGT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCGTCTGTACCAGCACTaGGTGCTCGTGGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWRLYQH*VLVESQ
Trigger: CTGGCTTTCCACGAGCACCCAGTGCTGGTACAGACG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGAGGTGTTACTTGGTTaGGAAGGTTATACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPEVLLG*EGYTWQ
Trigger: TTGCCAGGTATAACCTTCCCAACCAAGTAACACCTC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCTGGGCGGTGCCCATCTaGGTGATCAGAATGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLWAVPI*VIRMSL
Trigger: AAGGGACATTCTGATCACCCAGATGGGCACCGCCCA...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGGGGCTGATGGCAGTTaGTCCTATGAGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASGADGS*SYELWP
Trigger: GGGCCACAGCTCATAGGACCAACTGCCATCAGCCCC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCTCGCTGCAGCAGACTaGCTGCATACAGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWLAAAD*LHTAVR
Trigger: CCTCACAGCTGTATGCAGCCAGTCTGCTGCAGCGAG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTAACGACTCCTTGCGCTaGGTGATGCCCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSNDSLR*VMPSSR
Trigger: CCTGGAACTGGGCATCACCCAGCGCAAGGAGTCGTT...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGCCACCCCGGTCTTTaGCCAACGACTCCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGHPGL*PTTPCA
Trigger: AGCGCAAGGAGTCGTTGGCCAAAGACCGGGGTGGCC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCCCTGGAGCCGCAGCTaGTTGAGCTCGCTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHPWSRS*LSSLSD
Trigger: GTCTGACAGCGAGCTCAACCAGCTGCGGCTCCAGGG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTTCTGCGTGGTTGGCATaGGCGTTGGGGCTGCGTAAT +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRSAWLA*ALGLRN
Trigger: ATTACGCAGCCCCAACGCCCATGCCAACCACGCAGA...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTCTGCGTGGTTGGCATaGGCGTTGGGGCTGCGTAAT +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSAWLA*ALGLRN
Trigger: ATTACGCAGCCCCAACGCCCATGCCAACCACGCAGA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGTCTGCCGTGGCTTCTaGTGGGCAGCACGACTGTCA +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASVCRGF*WAARLS
Trigger: TGACAGTCGTGCTGCCCACCAGAAGCCACGGCAGAC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGCTCTCCGAGGCAGTaGGGGTGCTGTCCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGSPRQ*GCCPSS
Trigger: TGACGAAGGACAGCACCCCCACTGCCTCGGAGAGCC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATGGCCCCATGGGTCCTaGACCGTACTTGTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGWPHGS*TVLVCS
Trigger: CGAGCAGACAAGTACGGTCCAGGACCCATGGGGCCA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTGGCCCCATGGGTCCTaGACCGTACTTGTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASWPHGS*TVLVCS
Trigger: CGAGCAGACAAGTACGGTCCAGGACCCATGGGGCCA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCTTAGAGGGATGCTTTaGCCCCATGGGTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSLRGML*PHGSWT
Trigger: GGTCCAGGACCCATGGGGCCAAAGCATCCCTCTAAG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATGCGCTTTGAGGAGATaGCAGCTGGGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGCALRR*QLGPGS
Trigger: AGAGCCTGGCCCCAGCTGCCATCTCCTCAAAGCGCA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCAGGCATGGAATGGCTaGAGCAGAACTGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWQAWNG*SRTVGR
Trigger: CCTGCCCACAGTTCTGCTCCAGCCATTCCATGCCTG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCTCCTTGACATGTTCCTaGACGTCAGGCATGGAATGG +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPSLTCS*TSGMEW
Trigger: CCATTCCATGCCTGACGTCCAGGAACATGTCAAGGA...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTCACGCTTATACGCGTaGGCCCGCGGTCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHSRLYA*ARGPSL
Trigger: CAAGGACGGACCGCGGGCCCACGCGTATAAGCGTGA...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCTCCCGTGGTCACTGTaGTGCCGGTGTTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVLPWSL*CRCSLA
Trigger: AGCCAAGGAACACCGGCACCACAGTGACCACGGGAG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGGCAGCCCGCCGTCCTaGCTCCTCACCAGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQGSPPS*LLTSVA
Trigger: CGCCACGCTGGTGAGGAGCCAGGACGGCGGGCTGCC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 72 bp GAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCCATaGGTCCGGCAGATGCTTCACCTAGGTCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERHERSPKPMVP*VRQMLHLGRCC
Trigger: ACAGCAGCGACCTAGGTGAAGCATCTGCCGGACCAATGGGACCATTGGCTTGGGGGACCTTTCATGTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 72 bp CAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTaGGCTTCTGCCTCTCCACAGATGTGCCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QDLGIIGHSQDP*ASASPQMCPKL
Trigger: AAGCTTGGGGCACATCTGTGGAGAGGCAGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATGGCTGGCTGGGGGTTaGTGTGAGGTCCGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEWLAGG*CEVRGL
Trigger: AAGACCTCGGACCTCACATCAACCCCCAGCCAGCCA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCCTTGCTGGCATCACTaGAGACAATCTTGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLPCWHH*RQSWVA
Trigger: GGCAACCCAAGATTGTCTTCAGTGATGCCAGCAAGG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCAGAGCGGTCTTCGGGTaGGCCTGTGAGGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRAVFG*ACEALH
Trigger: ATGGAGAGCCTCACAGGCTCACCCGAAGACCGCTCT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCGGTTCCGAGGGCATTTaGGATGCACTTGGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGGSEGI*DALGGV
Trigger: AACACCTCCAAGTGCATCTCAAATGCCCTCGGAACC...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCAGCCATGAGCACAGATaGGGCCATTGTGATGCTCAC +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGSHEHR*GHCDAH
Trigger: GTGAGCATCACAATGGCCTCATCTGTGCTCATGGCT...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGACGGTGCCCATCTGGGTaGTCAGAATGTCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGRCPSG*SECPFW
Trigger: CCAGAAGGGACATTCTGATCACCCAGATGGGCACCG...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAACGGGAGTAGCTGTCTaGCTGCTGTTGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLTGVAV*LLLLGL
Trigger: CAAGCCAAGCAACAGCAGTCAGACAGCTACTCCCGT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTACCCACGGGGGTCATATaGGTCCTCCTCAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLPTGVI*VLLRFF
Trigger: GAAGAATCTGAGGAGGACTCATATGACCCCCGTGGG...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTCCCACGGGGGTCATATaGGTCCTCCTCAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRPTGVI*VLLRFF
Trigger: GAAGAATCTGAGGAGGACTCATATGACCCCCGTGGG...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGGACCACCCTCATCATaGGGCCATAGGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHGPPSS*GHRPSS
Trigger: TGAGGAGGGCCTATGGCCTCATGATGAGGGTGGTCC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTGTTGTGTCTGTGGCTaGCGTGATGCTGTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASCCVCG*RDAVPE
Trigger: CTCGGGCACAGCATCACGTCAGCCACAGACACAACA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTATTGGACACAGGGTGCTaGTGGGAAGAGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLLDTGC*WEEGQS
Trigger: AGATTGCCCCTCTTCCCAGCAGCACCCTGTGTCCAA...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACGAGGAGATCGCTCTTaGTCTGGCTTCCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAERGDRS*SGFPRG
Trigger: GCCTCTGGGGAAGCCAGAGCAAGAGCGATCTCCTCG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTGTTCTGCTCTGCCGTaGTTTGGACTGGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWCSALP*FGLAVP
Trigger: AGGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACCTGGTGTTCTGCTCTaGCGTGCTTTGGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAPGVLL*RALDWR
Trigger: CCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCTTCATCAGTCATGTCTaGCCGGGCTGGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGFISHV*PGWGLR
Trigger: CCTCAGCCCCCAGCCCGGGCAGACATGACTGATGAA...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTGGGTCTTGCGGGCTGTaGTTCGAATTCGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRGSCGL*FEFAAV
Trigger: AACAGCAGCGAATTCGAAGCACAGCCCGCAAGACCC...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCTGTCTGGACAGCCTaGTCTACTTGCTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWAVWTA*STCLTC
Trigger: GCAGGTCAAGCAAGTAGAGCAGGCTGTCCAGACAGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAGACCATGTCACAGCATaGCAGCTGGCTCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGADHVTA*QLALGP
Trigger: AGGCCCGAGAGCCAGCTGGCATGCTGTGACATGGTC...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACCCCGAGGCCTTGGCTaGAGCAGGCTTCCCCAAATA +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAPRGLG*SRLPQI
Trigger: TATTTGGGGAAGCCTGCTGCAGCCAAGGCCTCGGGG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCGCTCCAGCTCCTCCTaGAGCCGCAACTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDRSSSS*SRNCRS
Trigger: GCTGCGGCAGTTGCGGCTGCAGGAGGAGCTGGAGCG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTGCTGCAGCACATGCTaGTTGATGGTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWCCSTC*LMVCSS
Trigger: GGAGCTGCAGACCATCAAGCAGCATGTGCTGCAGCA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATGGCGCTCTTCCTGCTaGTGCTGCAGCACATGCTGC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEWRSSC*CCSTCC
Trigger: GCAGCATGTGCTGCAGCAGCAGCAGGAAGAGCGCCA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTGCAGTTGCTGGATCTaGTCTAGTTGCAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGCSCWI*SSCSRC
Trigger: GCAGCGACTGCAACTAGAGCAGATCCAGCAACTGCA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGAGACCCTGGGCAGCTaGTCGGGCTCGGTCTGGACG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDETLGS*SGSVWT
Trigger: CGTCCAGACCGAGCCCGAGCAGCTGCCCAGGGTCTC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTAGGCTCTTAGAGGGATaGTTTGGCCCCATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRRLLEG*FGPMGP
Trigger: AGGACCCATGGGGCCAAAGCATCCCTCTAAGAGCCT...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACCGTGGTCACTGTGGTaGCGGTGTTCCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEPWSLW*RCSLAE
Trigger: CTCAGCCAAGGAACACCGGCACCACAGTGACCACGG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGCCGGGAGCCCTTTTTaGTCTCAGAGGCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASAGSPF*SQRHGG
Trigger: ACCACCATGCCTCTGAGAGCAAAAAGGGCTCCCGGC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGACACAGGGTGCTGCTaGGAAGAGGGGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGDTGCC*EEGQSG
Trigger: CCCAGATTGCCCCTCTTCCCAGCAGCACCCTGTGTC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCTGGACCGAGGCGCAGTaGTCATGTCCATTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVWTEAQ*SCPFLG
Trigger: CCCTAGGAATGGACATGACCACTGCGCCTCGGTCCA...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCAGGCACAGTAGTCTCTaGAGGTGGCTTCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVRHSSL*RWLRHR
Trigger: CCTGTGCCGAAGCCACCTCCAGAGACTACTGTGCCT...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGACTACTACCCACTTTGTaGAGCTCCGAGGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGLLPTL*SSEGLG
Trigger: ACCCAGCCCCTCGGAGCTCCACAAAGTGGGTAGTAG...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACTGGCACTTGCCTTCTaGGCGCTGTGTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGALALAF*ALCLAR
Trigger: CCTGGCCAAACACAGCGCCCAGAAGGCAAGTGCCAG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGTGAAGACAGGGAGGTaGGTGAGGTGCCAGATGTAT +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLVKTGR*VRCQMY
Trigger: ATACATCTGGCACCTCACCCACCTCCCTGTCTTCAC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGTGGCCAGGAAGGTATaGGTCTGCTCTTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWVARKV*VCSWAL
Trigger: CAATGCCCAAGAGCAGACCCATACCTTCCTGGCCAC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCTGTGTGTGGCTTCCTaGTACCTGGAGGAGCATGTG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSLCVAS*YLEEHV
Trigger: CACATGCTCCTCCAGGTACCAGGAAGCCACACACAG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCTCACAGCATGCCAGCTaGCTCTCGGGCCTCATTCCG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGSQHAS*LSGLIP
Trigger: CGGAATGAGGCCCGAGAGCCAGCTGGCATGCTGTGA...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTGTACTGGGCCAGGCTaGCCTCCTGGAAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHCTGPG*PPGSQL
Trigger: CAGTTGGCTTCCAGGAGGCCAGCCTGGCCCAGTACA...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAGGTCCTTCAGCAGGTaGAACGCTGGAAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWRSFSR*NAGSNG
Trigger: CCCATTGCTTCCAGCGTTCCACCTGCTGAAGGACCT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCTGCCCCCGAGGCCTTaGCTGCAGCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDLPPRP*LQQASP
Trigger: TGGGGAAGCCTGCTGCAGCCAAGGCCTCGGGGGCAG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACGAGGCAGAGTCTGCTaGCGAAGGGTGCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAERGRVC*RRVLSA
Trigger: AGCTGACAGCACCCTTCGCCAGCAGACTCTGCCTCG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGTTGGCATGGGCGTTaGGGCTGCGTAATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGWHGR*GCVMAC
Trigger: ACAGGCCATTACGCAGCCCCAACGCCCATGCCAACC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGTCTGCCGTGGCTTCTaGTGGGCAGCACGACTGTCA +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGVCRGF*WAARLS
Trigger: TGACAGTCGTGCTGCCCACCAGAAGCCACGGCAGAC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGGCCGTGCCCGGCCATaGGCCATGCTCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDGRARP*AMLRDE
Trigger: CTCATCCCTGAGCATGGCCCATGGCCGGGCACGGCC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACTCCCGTGGTCACTGTaGTGCCGGTGTTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAELPWSL*CRCSLA
Trigger: AGCCAAGGAACACCGGCACCACAGTGACCACGGGAG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACTGGGTGTCTGCCTTTaGCTGCAGTGCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGALGVCL*LQCRRP
Trigger: GGGCCTTCTGCACTGCAGCCAAAGGCAGACACCCAG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGACGTGGCGGTCCTGCTaGCTGGGGCCCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQTWRSC*LGPWGC
Trigger: ACAGCCCCAGGGCCCCAGCCAGCAGGACCGCCACGT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTTGCAGACCTTGTTGTaGCACTGGGTGCAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSLQTLL*HWVQVL
Trigger: CAACACCTGCACCCAGTGTCACAACAAGGTCTGCAA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCAGTAGCCTGTGTCACTaGGGCTCTGTGGGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGSSLCH*GSVGFE
Trigger: CTCGAAGCCCACAGAGCCTCAGTGACACAGGCTACT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTGCTTTTGCTGAGCCATaGGCACAGATGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRAFAEP*AQMRPL
Trigger: CAATGGCCTCATCTGTGCTCATGGCTCAGCAAAAGC...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTAGGCGTGGCATGGAGTaGCGTTTCTTGATGCCACTA +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRRRGME*RFLMPL
Trigger: TAGTGGCATCAAGAAACGTCACTCCATGCCACGCCT...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGAGCCTGAGTCTGAGTaGCGGGAAAGACGAGACCTG +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEEPESE*RERRDL
Trigger: CAGGTCTCGTCTTTCCCGTCACTCAGACTCAGGCTC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAGGGTGCTGTCAGCTATaGATTGCTTCTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLGCCQL*IASGDS
Trigger: TGAGTCCCCAGAAGCAATTCATAGCTGACAGCACCC...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTGCTGCCTGGTGTTCTaGTCTGCCGTGCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASCCLVF*SAVLWT
Trigger: AGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTCCCGCATCTTCTCCTaGTCACGCAGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHSRIFS*SRSSSS
Trigger: AGAGGAGCTGCTGCGTGAGCAGGAGAAGATGCGGGA...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATGTCACGCCGGGTCTTaGGGGCTGTGCTTCGAATTC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAECHAGS*GLCFEF
Trigger: GAATTCGAAGCACAGCCCGCAAGACCCGGCGTGACA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGTCGAGGCACTGGCATaGACCATTCTGGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEVEALA*TILVWL
Trigger: GAGCCAGACCAGAATGGTGCATGCCAGTGCCTCGAC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTGATAACCAAAGGCTaGACAGCGGTTGACTGGCGT +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGLITKG*TAVDWR
Trigger: ACGCCAGTCAACCGCTGTGCAGCCTTTGGTTATCAA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCGGTGATGGGCAGCGTTaGAGCAATTGGGGTATTGAT +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLGDGQR*SNWGID
Trigger: ATCAATACCCCAATTGCTGCAACGCTGCCCATCACC...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCTGCTGCTGCAGCACATaGTGCTTGATGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVCCCST*CLMVCS
Trigger: GCTGCAGACCATCAAGCAGCATGTGCTGCAGCAGCA...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCCGCTCTTCCTGCTGCTaGTGCAGCACATGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRSSCC*CSTCCL
Trigger: CAAGCAGCATGTGCTGCAGCAGCAGCAGGAAGAGCG...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCAGCTGCAGCTGCTGCTaGAGTTGCTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVSCSCC*SCWICS
Trigger: AGAGCAGATCCAGCAACTGCAGCAGCAGCTGCAGCT...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTCACTGCTCCTCGGTTTaGAGTGACATGTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASHCSSV*SDMSEA
Trigger: CGCCTCAGACATGTCACTGCAAACCGAGGAGCAGTG...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCTCGTCCAACTCCGCCTaGTTCTTGCGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGSSNSA*FLRSLV
Trigger: CACCAAGCTGCGCAAGAAGCAGGCGGAGTTGGACGA...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACAGGAGGGTAGGTAGGTaGTGGGTATGTGCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHRRVGR*WVCARA
Trigger: GGCCCTAGCACATACCCAGCACCTACCTACCCTCCT...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGACTTGCTTCCGGTGCTTaGTGCGCTTTGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGLASGA*CALRRW
Trigger: CCATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAG...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAATGCCTTGCTTCCGGTaGTTGCTGCGCTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGMPCFR*LLRFEE
Trigger: CTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGGCAT...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTATGCCTTGCTTCCGGTaGTTGCTGCGCTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASMPCFR*LLRFEE
Trigger: CTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGGCAT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCTTTTGCTCCATGCCTTaGTTCCGGTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVFCSMP*FRCLLR
Trigger: GCGCAGCAAGCACCGGAAGCAAGGCATGGAGCAAAA...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCTTTTGAAGTCGCTCTaGAGTGTCCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWLLKSL*SVPFPF
Trigger: GAACGGGAACGGGACACTGCAGAGCGACTTCAAAAG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATGTTGCCCAAGACCCTaGTGTTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGCCPRP*CCCCCC
Trigger: ACAGCAGCAGCAGCAACAGCAGGGTCTTGGGCAACA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCTGTTGCCCAAGACCCTaGTGTTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVCCPRP*CCCCCC
Trigger: ACAGCAGCAGCAGCAACAGCAGGGTCTTGGGCAACA...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCTTTCCAGCTTGTTCTaGTGCCCCACCAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVLSSLF*CPTRED
Trigger: ATCCTCCCTGGTGGGGCAGCAGAACAAGCTGGAAAG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCGGAGAAGTTGTTCTCTaGCTGCCCAGGGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVGEVVL*LPRGSL
Trigger: CAAAGAGCCCCTGGGCAGCCAGAGAACAACTTCTCC...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTATAAGGGTGCTCGCCTaGGTCAGCAGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASIRVLA*VSSDAP
Trigger: TGGAGCATCACTGCTGACCCAGGCGAGCACCCTTAT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCTGGGTGTCAGCCTCTaGCTGCACAGACATAAGGGT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVLGVSL*LHRHKG
Trigger: ACCCTTATGTCTGTGCAGCCAGAGGCTGACACCCAG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCAACAGGCTTGACAACTaGGGTGGCAGGGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVNRLDN*GGRVSP
Trigger: AGGACTGACCCTGCCACCCCAGTTGTCAAGCCTGTT...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAACCCTTGGGAGCTTCTaGAACAGGCTTGACAACTGG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLTLGSF*NRLDNW
Trigger: CCAGTTGTCAAGCCTGTTCCAGAAGCTCCCAAGGGT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAGTCACTGAGGCTCTGTaGGCTTCGAGACAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAVTEAL*ASRQVL
Trigger: CAGGACCTGTCTCGAAGCCCACAGAGCCTCAGTGAC...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAATAGTTAGCAGTGGTTaGGGGCTGCCCATAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLIVSSG*GLPIAV
Trigger: CACAGCTATGGGCAGCCCCCAACCACTGCTAACTAT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTAAGGTTTCCAGGGCTTaGCTGCCCTTCTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASKVSRA*LPFWVG
Trigger: ACCTACCCAGAAGGGCAGCCAAGCCCTGGAAACCTT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCTGCTGCTGCAGTTGCTaGATCTGCTCTAGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLCCCSC*ICSSCS
Trigger: ACTGCAACTAGAGCAGATCCAGCAACTGCAGCAGCA...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGGCTGGAGAGACCCTaGGCAGCTGCTCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQWLERP*AAARAR
Trigger: CCGAGCCCGAGCAGCTGCCCAGGGTCTCTCCAGCCA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATCTTGCGCAGCTTGGTaGACTCATGCTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAESCAAW*THAPPA
Trigger: GGCTGGTGGAGCATGAGTCCACCAAGCTGCGCAAGA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGCTTCTTGCGCAGCTTaGTGGACTCATGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASASCAA*WTHAPP
Trigger: TGGTGGAGCATGAGTCCACCAAGCTGCGCAAGAAGC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACAACGACTCCTTGCGCTaGGTGATGCCCAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHNDSLR*VMPSSR
Trigger: CCTGGAACTGGGCATCACCCAGCGCAAGGAGTCGTT...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCAGGGTAGGTAGGTGCTaGGTATGTGCTAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVRVGRC*VCARAS
Trigger: ACTGGCCCTAGCACATACCCAGCACCTACCTACCCT...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCCATTCTGTTCCAGACTaGTGTAGTGGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGHSVPD*CSGSQR
Trigger: CCTCTGACTCCCACTACACCAGTCTGGAACAGAATG...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTCAGGGATGAGGGCTTaGAGCCCGCCTTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASSGMRA*SPPFEV
Trigger: GACTTCAAAAGGCGGGCTCCAAGCCCTCATCCCTGA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTCCTTGACATGTTCCTaGACGTCAGGCATGGAATGG +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTSLTCS*TSGMEW
Trigger: CCATTCCATGCCTGACGTCCAGGAACATGTCAAGGA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCGACTGCTGCGGTCCTaGAGCCGCCTGCCGACCTTG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQRLLRS*SRLPTL
Trigger: CAAGGTCGGCAGGCGGCTCCAGGACCGCAGCAGTCG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGGTGAGGGTTGGGGTTaGACCCACATTGGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGGEGWG*THIGCR
Trigger: TCTGCAACCAATGTGGGTTCAACCCCAACCCTCACC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGTGGAGAGAGGGGGCTaGGGAGACACCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQVERGG*GDTLPT
Trigger: GGTGGGAAGGGTGTCTCCTCAGCCCCCTCTCTCCAC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCATCTGGGCATGGTAGTTaGGGCCAGCTTCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGASGHGS*GQLRPN
Trigger: ATTTGGCCGAAGCTGGCCTCAACTACCATGCCCAGA...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCTGGAGTGACGTTTCTTaGTGCCACTACGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGWSDVS*CHYGLP
Trigger: AGGCAGGCCGTAGTGGCATCAAGAAACGTCACTCCA...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGTGTCAGCCTCTGGCTaGACAGACATAAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGVSASG*TDIRVL
Trigger: GAGCACCCTTATGTCTGTGCAGCCAGAGGCTGACAC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGCAGGTTGTACTCGCTaGCAGACTTGTAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHAGCTR*QTCRAE
Trigger: CTCGGCTCTACAAGTCTGGCAGCGAGTACAACCTGC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCAGGCCATACTTCCTTaGTTCCACAGCAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWQAILP*FHSKRG
Trigger: ACCTCTCTTGCTGTGGAAGCAAGGAAGTATGGCCTG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGACCTAAGCTGTACGAGTaGTTCAGTGAGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGPKLYE*FSELRS
Trigger: GGACCTCAGCTCACTGAAGCACTCGTACAGCTTAGG...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCTGGGGAGGCCCCTGTaGAGCACAGGCTCACGAGGT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQLGRPL*STGSRG
Trigger: ACCTCGTGAGCCTGTGCTGCACAGGGGCCTCCCCAG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCGAAGCAGTGGCATCGTaGTTGCTGTCAGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGEAVAS*LLSEPE
Trigger: CTCAGGCTCTGACAGCAAGCACGATGCCACTGCTTC...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCAGGCTCTTAGAGGGATaGTTTGGCCCCATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRLLEG*FGPMGP
Trigger: AGGACCCATGGGGCCAAAGCATCCCTCTAAGAGCCT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCTTGCTTCCGGTGCTTaGTGCGCTTTGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHLASGA*CALRRW
Trigger: CCATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACATCCTGGAACTTTCTaGCCCGAGAGGTCAGACTGC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEHPGTF*PERSDC
Trigger: GCAGTCTGACCTCTCGGGGCAGAAAGTTCCAGGATG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACTTTCCAGCTTGTTCTaGTGCCCCACCAGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAELSSLF*CPTRED
Trigger: ATCCTCCCTGGTGGGGCAGCAGAACAAGCTGGAAAG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGCTGCTGCTGGCTCTTaGACCGAGGCGCAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDAAAGS*TEAQWS
Trigger: TGACCACTGCGCCTCGGTCCAAGAGCCAGCAGCAGC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTAGCAGCCGCTTAGTTTaGCAGTTCAGACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASSSRLV*QFRQSH
Trigger: GTGGCTCTGTCTGAACTGCCAAACTAAGCGGCTGCT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGGTCCCAGGGGTAAGTaGGCCACCATTTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASGPRGK*ATILLH
Trigger: ATGAAGCAAAATGGTGGCCCACTTACCCCTGGGACC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGGGAAGTCGAGGCACTaGCATGCACCATTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHGKSRH*HAPFWS
Trigger: AGACCAGAATGGTGCATGCCAGTGCCTCGACTTCCC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATACCACCACTGTGTGTaGCTTCCTGGTACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEYHHCV*LPGTWR
Trigger: CCTCCAGGTACCAGGAAGCCACACACAGTGGTGGTA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACTGACTGCTGTTGCTTaGCTTGCTGCAGGCCCATAC +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAELTAVA*LAAGPY
Trigger: GTATGGGCCTGCAGCAAGCCAAGCAACAGCAGTCAG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCAGCGTTGCAGCAATTaGGGTATTGATAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPQRCSN*GIDSRI
Trigger: TATTCGACTATCAATACCCCAATTGCTGCAACGCTG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTGAACGCTGGAAGCAATaGGGAATCTTGGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRERWKQ*GILVQD
Trigger: ATCCTGCACCAAGATTCCCCATTGCTTCCAGCGTTC...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGACAATCTCCACCTTTaGGTCGGTGGCAGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHDNLHL*VGGSRD
Trigger: ATCACGGCTGCCACCGACCCAAAGGTGGAGATTGTC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCTGTTCAGCCTCTCACTaGAAGCAAACGAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLCSASH*KQTKCP
Trigger: TGGACACTTCGTTTGCTTCCAGTGAGAGGCTGAACA...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTGTTCAGCCTCTCACTaGAAGCAAACGAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGCSASH*KQTKCP
Trigger: TGGACACTTCGTTTGCTTCCAGTGAGAGGCTGAACA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGGGGCCAGAGGGAGTaGCAGGCACAGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQWGQRE*QAQQLR
Trigger: CCTCAGCTGCTGTGCCTGCCACTCCCTCTGGCCCCA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACCTGGACGTCAGGCATaGAATGGCTGGAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEPGRQA*NGWSRT
Trigger: AGTTCTGCTCCAGCCATTCCATGCCTGACGTCCAGG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCTGAGGTTTCCCCGCTaGTTGGCTGGCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQLRFPR*LAGSRG
Trigger: GCCCCTGCTGCCAGCCAACCAGCGGGGAAACCTCAG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATACCTGGAGGAGCATGTaGCCGGAGCTCTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDTWRSM*PELCRS
Trigger: ACTCCTGCAGAGCTCCGGTCACATGCTCCTCCAGGT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATACTGGTCCATGGAGTTaGGGGCAGCACACATGCGGC +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDTGPWS*GQHTCG
Trigger: GCCGCATGTGTGCTGCCCTCAACTCCATGGACCAGT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACCAGTTCCAGGTACTTaGGCTTGGCGTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEPVPGT*AWRQSP
Trigger: AGGAGATTGACGCCAAGCTCAAGTACCTGGAACTGG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATAGGGTGACGTGGGAGTaGTGCCTCTGTCCGGTGACA +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDRVTWE*CLCPVT
Trigger: TGTCACCGGACAGAGGCAGCACTCCCACGTCACCCT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGGTGTGGAGTCTGTGTaGCTTGGGCTACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDGVESV*LGLPWG
Trigger: CCCCCATGGTAGCCCAAGGCACACAGACTCCACACC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGCCAGTGCAGCTACTaGCAAAAGGAAACTTGTAGA +
Preference number: 4 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTCQCSY*QKETCR
Trigger: TCTACAAGTTTCCTTTTGGCAGTAGCTGCACTGGCA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATCTTCCTGCTGCTGCTaGAGCACATGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAESSCCC*STCCLM
Trigger: CATCAAGCAGCATGTGCTGCAGCAGCAGCAGGAAGA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATCCTCATCATCTGTCTaGACACTGCAGTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGSSSSV*TLQSAL
Trigger: CAGTGCTGACTGCAGTGTGCAGACAGATGATGAGGA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCCAGGGGCTCTTTaGGGTCCAGTCTCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQCPGAL*GPVSGE
Trigger: TTCCCCGGAGACTGGACCCCAAAGAGCCCCTGGGCA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTGCCGTGCTTTGGACTaGCGGTTCCTCCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHCRALD*RFLQFL
Trigger: CAAAAACTGGAGGAACCGCCAGTCCAAAGCACGGCA...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCCTGAGAATAAGGCTTaGGGACTGGTTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHPENKA*GLVPQP
Trigger: AGGCTGAGGAACCAGTCCCCAAGCCTTATTCTCAGG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATTACTGGGTGGTGTCTTaGAGCGTTCACGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDYWVVS*SVHAAA
Trigger: AGCGGCGGCGTGAACGCTCCAAGACACCACCCAGTA...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCCAGAGGTGTTACTTaGTTGGGAAGGTTATACCTG +
Preference number: 4 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWARGVT*LGRLYL
Trigger: CAGGTATAACCTTCCCAACCAAGTAACACCTCTGGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACAGCAGGTGGAACGCTaGAAGCAATGGGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAQQVER*KQWGIL
Trigger: CAAGATTCCCCATTGCTTCCAGCGTTCCACCTGCTG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTGGATGAGGAAGCAGTaGCATCGTGCTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHWMRKQ*HRACCQ
Trigger: CTGACAGCAAGCACGATGCCACTGCTTCCTCATCCA...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGAGCAGCAGGGCAGAGTaGGTCCCTCAAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQSSRAE*VPQGRL
Trigger: CAGCCGTCCTTGAGGGACCCACTCTGCCCTGCTGCT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACCTTGGCCTCCTCGATaGGTGAGAACTTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAPWPPR*VRTWRS
Trigger: AGATCTCCAAGTTCTCACCCATCGAGGAGGCCAAGG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGCAGGGCCTCGCTTCTaGGAGGAGGAGACTGTATGG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDAGPRF*EEETVW
Trigger: CCATACAGTCTCCTCCTCCCAGAAGCGAGGCCCTGC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCCTGAGTGCCTCCCGTaGTCACTGTGGTGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQPECLP*SLWCRC
Trigger: ACACCGGCACCACAGTGACCACGGGAGGCACTCAGG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCTCTCAGAGGCATGGTaGTATGCTGACGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDLSEAW*YADGAR
Trigger: CCGGGCTCCGTCAGCATACCACCATGCCTCTGAGAG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATCTTTTGCAAAATGCTaGGTGACTCGGACATCGGGG +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAESFAKC*VTRTSG
Trigger: CCCCGATGTCCGAGTCACTCAGCATTTTGCAAAAGA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCAGATGAGGCCATTGTaGTGCTCACCGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDQMRPL*CSPWWQ
Trigger: CTGCCACCACGGTGAGCATCACAATGGCCTCATCTG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCGCAGGGGAAGTGGGTaGGACAAAAGGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQRRGSG*DKRSVG
Trigger: CCCCACAGACCTTTTGTCTCACCCACTTCCCCTGCG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAGCAGTAGCAGATGCTTaGTTTGGGGTTGGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGAVADA*FGVGEV
Trigger: AACTTCTCCAACCCCAAAGCAAGCATCTGCTACTGC...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTAGTGGGCCACCATTTTaGTTCATTGGGTCCATGTAT +
Preference number: 4 (lower is better)
Translates to: KPTECPYTCILCGLPSLSSGPPF*FIGSMY
Trigger: ATACATGGACCCAATGAAGCAAAATGGTGGCCCACT...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCCGAGGGCATTTGAGATaGACTTGGAGGTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGRGHLR*TWRCCL
Trigger: CAGACAACACCTCCAAGTGCATCTCAAATGCCCTCG...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTTGCAGTCGCTGCTGTaGCAGCTGCTCACGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQLQSLL*QLLTLQ
Trigger: CTGCAGCGTGAGCAGCTGGCACAGCAGCGACTGCAA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATAGCTGCAGCTGCAGCTaGTGCTGCAGTTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDSCSCS*CCSCWI
Trigger: GATCCAGCAACTGCAGCAGCAGCTGCAGCTGCAGCT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACTGAACACTGCTGTCTaGAATTCTCCTGACCGTGCT +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAELNTAV*NSPDRA
Trigger: AGCACGGTCAGGAGAATTGCAGACAGCAGTGTTCAG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGCACGACTGTCAGCTTaGACTGGGAAAGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQARLSA*TGKGAL
Trigger: GAGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTAACTTGGAGATCTTTTaGTCCATGCCTTGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASNLEIF*SMPCFR
Trigger: CCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGCCGGGAGCCCTTTTTaGTCTCAGAGGCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDAGSPF*SQRHGG
Trigger: ACCACCATGCCTCTGAGAGCAAAAAGGGCTCCCGGC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCACCAGATGCGGTGTTaGGTTAAAGCCACACAGGTT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHHQMRC*VKATQV
Trigger: AACCTGTGTGGCTTTAACCCAACACCGCATCTGGTG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTGTCTTCTTTTCCTaGGCGCTGCTAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGTVFFS*ALLEVL
Trigger: CAAGACCTCTAGCAGCGCCCAGGAAAAGAAGACAGT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCAGCCTCCCCACCCTTaGGAGCTTCTGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQQPPHP*ELLEQA
Trigger: AGCCTGTTCCAGAAGCTCCCAAGGGTGGGGAGGCTG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACATTCTGTTCCAGACTaGTGTAGTGGGAGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEHSVPD*CSGSQR
Trigger: CCTCTGACTCCCACTACACCAGTCTGGAACAGAATG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGACTGTATGGCCCCCATaGTGCCTGAACCGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQTVWPP*CLNRSE
Trigger: CTCCGACCGGTTCAGGCACCATGGGGGCCATACAGT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGCAGGGCCTCGCTTCTaGGAGGAGGAGACTGTATGG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQAGPRF*EEETVW
Trigger: CCATACAGTCTCCTCCTCCCAGAAGCGAGGCCCTGC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCTTCTGGAACAGGCTTaGCAACTGGGGTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQLLEQA*QLGWQG
Trigger: ACCCTGCCACCCCAGTTGTCAAGCCTGTTCCAGAAG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATAGACAGGGAGGTGGGTaGGGTGCCAGATGTATAGCT +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDRQGGG*GARCIA
Trigger: AGCTATACATCTGGCACCTCACCCACCTCCCTGTCT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACAGCTTGAGAGGATCCTaGGGCTCTTTTGCAAAATGC +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHSLRGS*GSFAKC
Trigger: GCATTTTGCAAAAGAGCCTCAGGATCCTCTCAAGCT...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGGTGACGCAGGTCCGTaGAGGAGCCATACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQGDAGP*RSHTVS
Trigger: GCTTACAGTATGGCTCCTTCACGGACCTGCGTCACC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGGCAGCAGCCTTGGATaGTGCCTGGTGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQGSSLG*CLVFCS
Trigger: AGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACATTGGGTCCATGTATaGGCTCTCGGCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAHWVHV*ALGIQK
Trigger: TTTCTGAATGCCGAGAGCGCATACATGGACCCAATG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCAGCAGATGCTTGCTTTaGGGTTGGAGAAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSKAGSLERHERSPKPMVSRCLL*GWRSCS
Trigger: AGAACAACTTCTCCAACCCCAAAGCAAGCATCTGCT...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGGCGCCGCAGGGGAAGTaGGTGAGACAAAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQAPQGK*VRQKVC
Trigger: ACAGACCTTTTGTCTCACCCACTTCCCCTGCGGCGC...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATAATAATCAGCAGAGCTaGGGTACCCGGGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDNNQQS*GTRADP
Trigger: AGGGTCAGCCCGGGTACCCCAGCTCTGCTGATTATT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGCTGCCAAAGTCATCTaGAGACTCAGCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDAAKVI*RLSCVL
Trigger: CAGGACACAGCTGAGTCTTCAGATGACTTTGGCAGC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR TCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAAGTCTTTTCTGGTGCTaGTATGTACCTGACAATCTC +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGSLFWC*YVPDNL
Trigger: GAGATTGTCAGGTACATATCAGCACCAGAAAAGACT...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCTGTTGCTTGGCTTaGTGCAGGCCCATACTGAGC +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQCCCLA*CRPILS
Trigger: GCTCAGTATGGGCCTGCAGCAAGCCAAGCAACAGCA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR GCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTTTTGCTCCATGCCTTaGTTCCGGTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQFCSMP*FRCLLR
Trigger: GCGCAGCAAGCACCGGAAGCAAGGCATGGAGCAAAA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR GCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCTTTTGAAGTCGCTCTaGAGTGTCCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDLLKSL*SVPFPF
Trigger: GAACGGGAACGGGACACTGCAGAGCGACTTCAAAAG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGCTCAGAGGGGGTAGATaGAGAGAGAGGTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQLRGGR*RERWAR
Trigger: TCTAGCCCACCTCTCTCTCCATCTACCCCCTCTGAG...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACATTTGAGATGCACTTaGAGGTGTTGTCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEHLRCT*RCCLAV
Trigger: TACAGCCAGACAACACCTCCAAGTGCATCTCAAATG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAAATTGGTGTCAGACATaGAGGAGTATAGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGANWCQT*RSIAFQ
Trigger: CTGGAAGGCTATACTCCTCCATGTCTGACACCAATT...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAAAATCCATTTTGAGTTaGTCCACTACTGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGKSILS*STTACS
Trigger: ACTGCAGGCAGTAGTGGACCAACTCAAAATGGATTT...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGAATAATCAGCAGAGCTaGGGTACCCGGGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQNNQQS*GTRADP
Trigger: AGGGTCAGCCCGGGTACCCCAGCTCTGCTGATTATT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACAAATCCATTTTGAGTTaGTCCACTACTGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHKSILS*STTACS
Trigger: ACTGCAGGCAGTAGTGGACCAACTCAAAATGGATTT...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATAGGTGCCTGGTGGGCTaGAAATCCATTTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDRCLVG*KSILSW
Trigger: CCAACTCAAAATGGATTTCCAGCCCACCAGGCACCT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 72 bp AGCAGTACCCCACTGGGAAGATGTGACCAGTTTCTTTaGGCTCAGGCCTGGGATAGGAGGAAAAATGATATA +
Preference number: 4 (lower is better)
Translates to: SSTPLGRCDQFL*AQAWDRRKNDI
Trigger: TATATCATTTTTCCTCCTATCCCAGGCCTGAGCCAAAAGAAACTGGTCACATCTTCCCAGTGGGGTACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATGTGCTGATATGTACCTaGCAATCTCCACCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDVLICT*QSPPLG
Trigger: ACCCAAAGGTGGAGATTGTCAGGTACATATCAGCAC...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGAGGTGCCTGGTGGGCTaGAAATCCATTTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQRCLVG*KSILSW
Trigger: CCAACTCAAAATGGATTTCCAGCCCACCAGGCACCT...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
3UTR CAA 72 bp TCAGCCCTTTTAGCGATGGCCCCATATAGCCCAAGTTaGATCTCTGAGATATTCCATAGTGTGAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SALLAMAPYSPS*ISEIFHSVKKA
Trigger: AGCTTTCTTCACACTATGGAATATCTCAGAGATCAAACTTGGGCTATATGGGGCCATCGCTAAAAGGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR TCA 90 bp CTCATGTACATGTGCTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTCCTCATCATCTGTCTaGACACTGCTGTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: LMYMCLHIQYLMTSMALQSSSSV*TLLSAI
Trigger: AATTGCAGACAGCAGTGTTCAGACAGATGATGAGGA...CTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAGCACATGTACATGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TGGTGGCCTGAGGGCTGGCCTTGGTGGCCTGAGGGCTGGCCTTGGTaGCCTGGGGGCTGGCCTTGGCAGGCAGGGAGCCTGAGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: WWPEGWPWWPEGWPW*PGGWPWQAGSLRAG
Trigger: GCCAGCCCTCAGGCTCCCTGCCTGCCAAGGCCAGCCCCCAGGCCACCAAGGCCAGCCCTCAGGCCACCAAGGCCAGCCCTCAGGCCACCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GGCTGGCCTTGGTGGTCTGAGGGCTGGCCTTGGTGGCCTGAGGGCTaGCCTTGGTGGCCTGAGGGCTGGCCTTGGTGGCCTGGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GWPWWSEGWPWWPEG*PWWPEGWPWWPGGW
Trigger: CCAGCCCCCAGGCCACCAAGGCCAGCCCTCAGGCCACCAAGGCCAGCCCTCAGGCCACCAAGGCCAGCCCTCAGACCACCAAGGCCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CCCGCCACAGCAATGAAGGCCGCGTGGGTCAGCGGTGGCCAGTACTaGCCATTCTGGGCCAGCTCGGTGGCAGCCGGGGGAGGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: PATAMKAAWVSGGQY*PFWASSVAAGGGPR
Trigger: CCGAGGGCCTCCCCCGGCTGCCACCGAGCTGGCCCAGAATGGCCAGTACTGGCCACCGCTGACCCACGCGGCCTTCATTGCTGTGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GGTGAGGTCGGGCCTCGTGGCGACCCATGTCCCGAGCGTGCGGTTTaGCAGCCCGCCGTCCTGGCTCCTCACCAGCGTGGCGGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GEVGPRGDPCPERAV*QPAVLAPHQRGGLS
Trigger: ACTCAGGCCGCCACGCTGGTGAGGAGCCAGGACGGCGGGCTGCCAAACCGCACGCTCGGGACATGGGTCGCCACGAGGCCCGACCTCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GGCCTGGCTGAGGTTTCCCCGCTGGTTGGCTGGCAGCAGGGGCTGTaGCCCGGGTGGTTGGCTGGCTCTGAGGCTGTAGCCGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GLAEVSPLVGWQQGL*PGWLAGSEAVAEPG
Trigger: CCCAGGCTCGGCTACAGCCTCAGAGCCAGCCAACCACCCGGGGCACAGCCCCTGCTGCCAGCCAACCAGCGGGGAAACCTCAGCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp GCAATGAAGGCCGCGTGGGTCAGCGGTGGCCAGTACTGGCCATTCTaGGCCAGCTCGGTGGCAGCCGGGGGAGGCCCTCGGCTAGGTGCC +
Preference number: 5 (lower is better)
Translates to: AMKAAWVSGGQYWPF*ASSVAAGGGPRLGA
Trigger: GGCACCTAGCCGAGGGCCTCCCCCGGCTGCCACCGAGCTGGCCCAGAATGGCCAGTACTGGCCACCGCTGACCCACGCGGCCTTCATTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CGAGCGTGCGGTTTGGCAGCCCGCCGTCCTGGCTCCTCACCAGCGTaGCGGCCTGAGTGCCTCCCGTGGTCACTGTGGTGCCGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: RACGLAARRPGSSPA*RPECLPWSLWCRCS
Trigger: GGAACACCGGCACCACAGTGACCACGGGAGGCACTCAGGCCGCCACGCTGGTGAGGAGCCAGGACGGCGGGCTGCCAAACCGCACGCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GCCGGTCCTCCTGAGACGCTTCCTCCTTCTCCGACGCAGGCCGGCTaGGGACCCCACTGCCACTCCCAGCGACGGCCTCTCCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: AGPPETLPPSPTQAG*GPHCHSQRRPLLLA
Trigger: AGCCAGCAGGAGAGGCCGTCGCTGGGAGTGGCAGTGGGGTCCTCAGCCGGCCTGCGTCGGAGAAGGAGGAAGCGTCTCAGGAGGACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CCCTTCAGTCCCCGCCACAGCAATGAAGGCCGCGTGGGTCAGCGGTaGCCAGTACTGGCCATTCTGGGCCAGCTCGGTGGCAGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: PFSPRHSNEGRVGQR*PVLAILGQLGGSRG
Trigger: CCCCCGGCTGCCACCGAGCTGGCCCAGAATGGCCAGTACTGGCCACCGCTGACCCACGCGGCCTTCATTGCTGTGGCGGGGACTGAAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CTGCGCCTGAGGAGCCCGTCCCTGCTGGGGCGCTTTGGCTGCGGGTaGTTTAGAGCTGCTGGCCTGCTCTGCACGTGGCGGTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LRLRSPSLLGRFGCG*FRAAGLLCTWRSCW
Trigger: CCAGCAGGACCGCCACGTGCAGAGCAGGCCAGCAGCTCTAAACCACCCGCAGCCAAAGCGCCCCAGCAGGGACGGGCTCCTCAGGCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GCTGTCTACCTGCAGCGTCCTGCGGGGACTTTCGGCCTCCTGGCCTaGTGGGCCTTGGGCCCTTGTCTCTCGGGGGCTCTCTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AVYLQRPAGTFGLLA*WALGPCLSGALSAR
Trigger: CCTGGCCGAGAGAGCCCCCGAGAGACAAGGGCCCAAGGCCCATCAGGCCAGGAGGCCGAAAGTCCCCGCAGGACGCTGCAGGTAGACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CCTCAAGGACGGCTGGTTCCCCAGGATCCTTCCCGGGACGCCCACTaGCTCCACCTGGCCCCAAAGGCTCCAGCCGCTGGCTCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: PQGRLVPQDPSRDAH*LHLAPKAPAAGSPR
Trigger: CCTCGGAGAGCCAGCGGCTGGAGCCTTTGGGGCCAGGTGGAGTCAGTGGGCGTCCCGGGAAGGATCCTGGGGAACCAGCCGTCCTTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp CTGGCCTTGGTAGCAGGGACGGTGGTGGGCCCCGCCAACCCTCGCTaGAGCAGACTGGCTGCATACAGCTGTGAGGGCACCTGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LALVAGTVVGPANPR*SRLAAYSCEGTWPA
Trigger: GGCTGGCCAGGTGCCCTCACAGCTGTATGCAGCCAGTCTGCTGCAGCGAGGGTTGGCGGGGCCCACCACCGTCCCTGCTACCAAGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CTCTGCAGGAGTAGCCCGGTGGGGTTCAGCACCGGGCTCTGGCACTaGTCCTGGCTTCAGGCCCACACCCTGGGCGGTGCCCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: LCRSSPVGFSTGLWH*SWLQAHTLGGAHLG
Trigger: ACCCAGATGGGCACCGCCCAGGGTGTGGGCCTGAAGCCAGGACCAGTGCCAGAGCCCGGTGCTGAACCCCACCGGGCTACTCCTGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GGTTGCCCGGGCCCTTCAGTCCCCGCCACAGCAATGAAGGCCGCGTaGGTCAGCGGTGGCCAGTACTGGCCATTCTGGGCCAGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GCPGPSVPATAMKAA*VSGGQYWPFWASSV
Trigger: CACCGAGCTGGCCCAGAATGGCCAGTACTGGCCACCGCTGACCCACGCGGCCTTCATTGCTGTGGCGGGGACTGAAGGGCCCGGGCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CCGGGACGCCCACTGACTCCACCTGGCCCCAAAGGCTCCAGCCGCTaGCTCTCCGAGGCAGTGGGGGTGCTGTCCTTCGTCAGTTCGCTG +
Preference number: 5 (lower is better)
Translates to: PGRPLTPPGPKGSSR*LSEAVGVLSFVSSL
Trigger: CAGCGAACTGACGAAGGACAGCACCCCCACTGCCTCGGAGAGCCAGCGGCTGGAGCCTTTGGGGCCAGGTGGAGTCAGTGGGCGTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp GGCTCCTCACCAGCGTGGCGGCCTGAGTGCCTCCCGTGGTCACTGTaGTGCCGGTGTTCCTTGGCTGAGGTATGCCGGCCTGGACCACCC +
Preference number: 5 (lower is better)
Translates to: GSSPAWRPECLPWSL*CRCSLAEVCRPGPP
Trigger: GGGTGGTCCAGGCCGGCATACCTCAGCCAAGGAACACCGGCACCACAGTGACCACGGGAGGCACTCAGGCCGCCACGCTGGTGAGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CGCCGTCCTGGCTCCTCACCAGCGTGGCGGCCTGAGTGCCTCCCGTaGTCACTGTGGTGCCGGTGTTCCTTGGCTGAGGTATGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: RRPGSSPAWRPECLP*SLWCRCSLAEVCRP
Trigger: AGGCCGGCATACCTCAGCCAAGGAACACCGGCACCACAGTGACCACGGGAGGCACTCAGGCCGCCACGCTGGTGAGGAGCCAGGACGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp CCTTCCCACCTCTGGAGGGGCAGTTGCCTGGGTAGGCCCAGGCACTaGGGTGGCCCTGGCTGCTTCAGCCTGGCGGGGACCAGACTGTGT +
Preference number: 5 (lower is better)
Translates to: PSHLWRGSCLGRPRH*GGPGCFSLAGTRLC
Trigger: ACACAGTCTGGTCCCCGCCAGGCTGAAGCAGCCAGGGCCACCTCAGTGCCTGGGCCTACCCAGGCAACTGCCCCTCCAGAGGTGGGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp TCCCGCGAGGAGGCCTGCCGCATCCGGGCTATGCTCTGGGATGTCTaGAGGATCTCCTCGTACACGGCCGCTCCAAGGCCTGCGGGCGTG +
Preference number: 5 (lower is better)
Translates to: SREEACRIRAMLWDV*RISSYTAAPRPAGV
Trigger: CACGCCCGCAGGCCTTGGAGCGGCCGTGTACGAGGAGATCCTTCAGACATCCCAGAGCATAGCCCGGATGCGGCAGGCCTCCTCGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CAGGCTCACGAGGTTGCCCGGGCCCTTCAGTCCCCGCCACAGCAATaGAGGCCGCGTGGGTCAGCGGTGGCCAGTACTGGCCATTCTGGG +
Preference number: 5 (lower is better)
Translates to: QAHEVARALQSPPQQ*RPRGSAVASTGHSG
Trigger: CCCAGAATGGCCAGTACTGGCCACCGCTGACCCACGCGGCCTTCATTGCTGTGGCGGGGACTGAAGGGCCCGGGCAACCTCGTGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TGCCAGCTGGCTCTCGGGCCTCATTCCGGTGAGGTCCAGGGCACCTaGCGGCTCTTCTGGGAGCAGGGTAGTCACTGTGCCGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CQLALGPHSGEVQGT*RLFWEQGSHCAGCA
Trigger: GGCACAGCCGGCACAGTGACTACCCTGCTCCCAGAAGAGCCGGCAGGTGCCCTGGACCTCACCGGAATGAGGCCCGAGAGCCAGCTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TTGGCAGCCCGCCGTCCTGGCTCCTCACCAGCGTGGCGGCCTGAGTaGCTCCCGTGGTCACTGTGGTGCCGGTGTTCCTTGGCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: LAARRPGSSPAWRPE*LPWSLWCRCSLAEV
Trigger: TACCTCAGCCAAGGAACACCGGCACCACAGTGACCACGGGAGGCACTCAGGCCGCCACGCTGGTGAGGAGCCAGGACGGCGGGCTGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp AGTTGTCTGCGCCTGAGGAGCCCGTCCCTGCTGGGGCGCTTTGGCTaGGGGTGGTTTAGAGCTGCTGGCCTGCTCTGCACGTGGCGGTCC +
Preference number: 5 (lower is better)
Translates to: SCLRLRSPSLLGRFG*GWFRAAGLLCTWRS
Trigger: GGACCGCCACGTGCAGAGCAGGCCAGCAGCTCTAAACCACCCGCAGCCAAAGCGCCCCAGCAGGGACGGGCTCCTCAGGCGCAGACAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp TGCAGCGTCCTGCGGGGACTTTCGGCCTCCTGGCCTGATGGGCCTTaGGCCCTTGTCTCTCGGGGGCTCTCTCGGCCAGGAGCAGTAGCA +
Preference number: 5 (lower is better)
Translates to: CSVLRGLSASWPDGP*ALVSRGLSRPGAVA
Trigger: TGCTACTGCTCCTGGCCGAGAGAGCCCCCGAGAGACAAGGGCCCAAGGCCCATCAGGCCAGGAGGCCGAAAGTCCCCGCAGGACGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GTCCTGCTGTCTACCTGCAGCGTCCTGCGGGGACTTTCGGCCTCCTaGCCTGATGGGCCTTGGGCCCTTGTCTCTCGGGGGCTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: VLLSTCSVLRGLSAS*PDGPWALVSRGLSR
Trigger: CCGAGAGAGCCCCCGAGAGACAAGGGCCCAAGGCCCATCAGGCCAGGAGGCCGAAAGTCCCCGCAGGACGCTGCAGGTAGACAGCAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TCCTCCTCCTCGGAGGAGTCCTCGATGGTGGGCAGCAGGGGCCCGTaGGAGCGGTGCCGCGCCTTGCGCTGCTGCTTTGCTTCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: SSSSEESSMVGSRGP*ERCRALRCCFASSR
Trigger: CCTAGAAGAAGCAAAGCAGCAGCGCAAGGCGCGGCACCGCTCCCACGGGCCCCTGCTGCCCACCATCGAGGACTCCTCCGAGGAGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp AGGAGTAGCCCGGTGGGGTTCAGCACCGGGCTCTGGCACTGGTCCTaGCTTCAGGCCCACACCCTGGGCGGTGCCCATCTGGGTGATCAG +
Preference number: 5 (lower is better)
Translates to: RSSPVGFSTGLWHWS*LQAHTLGGAHLGDQ
Trigger: CTGATCACCCAGATGGGCACCGCCCAGGGTGTGGGCCTGAAGCCAGGACCAGTGCCAGAGCCCGGTGCTGAACCCCACCGGGCTACTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CCTCCCACTGCTCCTCGGTTTGCAGTGACATGTCTGAGGCGGAGCTaGGGAGGCCCCTGTGCAGCACAGGCTCACGAGGTTGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PPTAPRFAVTCLRRS*GGPCAAQAHEVARA
Trigger: GGCCCGGGCAACCTCGTGAGCCTGTGCTGCACAGGGGCCTCCCCAGCTCCGCCTCAGACATGTCACTGCAAACCGAGGAGCAGTGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTCCCGAGCGTGCGGTTaGGCAGCCCGCCGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTSRACG*AARRPG
Trigger: GCCAGGACGGCGGGCTGCCAAACCGCACGCTCGGGA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GGCCGGCAACGTAGAGGAGTGCTCCCCACGAGAGCGGTCTTCGGGTaGGCCTGTGAGGCTCTCCATCTCCAGCTCAGGCTCCCGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GRQRRGVLPTRAVFG*ACEALHLQLRLPVQ
Trigger: CTGGACCGGGAGCCTGAGCTGGAGATGGAGAGCCTCACAGGCTCACCCGAAGACCGCTCTCGTGGGGAGCACTCCTCTACGTTGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CTGGGCCCACCTCGGTACGGGGCTGTCTGGACAGCCTGCTCTACTTaGTTGACCTGCGCCAGGCACACGGGGCTACCTGAACCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LGPPRYGAVWTACST*LTCARHTGLPEPWP
Trigger: TGGCCAGGGTTCAGGTAGCCCCGTGTGCCTGGCGCAGGTCAAGCAAGTAGAGCAGGCTGTCCAGACAGCCCCGTACCGAGGTGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCCTCGTCCAACTCCGCCTGCTTCTTGCGCAGCTTGGTGGACTCATaGTCCACCAGCCGCAGGTCCCGGTCCAGCTCCCGGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSSNSACFLRSLVDS*STSRRSRSSSRSRL
Trigger: CAGCCTGCTCCGGGAGCTGGACCGGGACCTGCGGCTGGTGGAGCATGAGTCCACCAAGCTGCGCAAGAAGCAGGCGGAGTTGGACGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp TGGAGCCGCCTGCCGACCTTGCATCTGTGGCTGAGCCTGGGTGTCTaGCTTTGGCTGCAGTGCAGAAGGCCCAGTGTGGGCCTGCCGGGA +
Preference number: 5 (lower is better)
Translates to: WSRLPTLHLWLSLGV*LWLQCRRPSVGLPG
Trigger: TCCCGGCAGGCCCACACTGGGCCTTCTGCACTGCAGCCAAAGGCAGACACCCAGGCTCAGCCACAGATGCAAGGTCGGCAGGCGGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp GTACCTGGAGGAGCATGTGACCGGAGCTCTGCAGGAGTAGCCCGGTaGGGTTCAGCACCGGGCTCTGGCACTGGTCCTGGCTTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VPGGACDRSSAGVAR*GSAPGSGTGPGFRP
Trigger: GGGCCTGAAGCCAGGACCAGTGCCAGAGCCCGGTGCTGAACCCCACCGGGCTACTCCTGCAGAGCTCCGGTCACATGCTCCTCCAGGTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CTCGGGCCTCATTCCGGTGAGGTCCAGGGCACCTGCCGGCTCTTCTaGGAGCAGGGTAGTCACTGTGCCGGCTGTGCCCTCTCCCATCTG +
Preference number: 5 (lower is better)
Translates to: LGPHSGEVQGTCRLF*EQGSHCAGCALSHL
Trigger: CAGATGGGAGAGGGCACAGCCGGCACAGTGACTACCCTGCTCCCAGAAGAGCCGGCAGGTGCCCTGGACCTCACCGGAATGAGGCCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CTGCGACTGCTGCGGTCCTGGAGCCGCCTGCCGACCTTGCATCTGTaGCTGAGCCTGGGTGTCTGCCTTTGGCTGCAGTGCAGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: LRLLRSWSRLPTLHL*LSLGVCLWLQCRRP
Trigger: GGGCCTTCTGCACTGCAGCCAAAGGCAGACACCCAGGCTCAGCCACAGATGCAAGGTCGGCAGGCGGCTCCAGGACCGCAGCAGTCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACCGGCCACCCCGGTCTTaGGCCAACGACTCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHRPPRS*ANDSLR
Trigger: GCGCAAGGAGTCGTTGGCCAAAGACCGGGGTGGCCG...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GGGCTGATGGCAGTTGGTCCTATGAGCTGTGGCCCAGCCACACCCTaGGCCTGTCCATCCGGTTCTGTCTGGCAGGCCAGGCTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GLMAVGPMSCGPATP*ACPSGSVWQARLSP
Trigger: CGGGGAGAGCCTGGCCTGCCAGACAGAACCGGATGGACAGGCTCAGGGTGTGGCTGGGCCACAGCTCATAGGACCAACTGCCATCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GACACCGAGGGGGACCGTCCTGATCTCTGTGTCCTGCTGTCTACCTaGAGCGTCCTGCGGGGACTTTCGGCCTCCTGGCCTGATGGGCCT +
Preference number: 5 (lower is better)
Translates to: DTEGDRPDLCVLLST*SVLRGLSASWPDGP
Trigger: AGGCCCATCAGGCCAGGAGGCCGAAAGTCCCCGCAGGACGCTGCAGGTAGACAGCAGGACACAGAGATCAGGACGGTCCCCCTCGGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CTCTGTCCGGTGACACCGAGGGGGACCGTCCTGATCTCTGTGTCCTaGTGTCTACCTGCAGCGTCCTGCGGGGACTTTCGGCCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LCPVTPRGTVLISVS*CLPAASCGDFRPPG
Trigger: GCCAGGAGGCCGAAAGTCCCCGCAGGACGCTGCAGGTAGACAGCAGGACACAGAGATCAGGACGGTCCCCCTCGGTGTCACCGGACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp ACCCCAGCCGTACAGTGCCAGGGGTCCGTCTGTACCAGCACTGGGTaGTCGTGGAAAGCCAGGTGGCCCAGCCGGTTCCGAGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: TPAVQCQGSVCTSTG*SWKARWPSRFRGHL
Trigger: CAAATGCCCTCGGAACCGGCTGGGCCACCTGGCTTTCCACGAGCACCCAGTGCTGGTACAGACGGACCCCTGGCACTGTACGGCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CACTGTATGCCGACGCCATTCGGGACCGGCTGCTGCTACCGTACATaGGCTCATCCTCCTCTGCCGCGTCGCGGCTGGACACCCCGTAGT +
Preference number: 5 (lower is better)
Translates to: HCMPTPFGTGCCYRT*AHPPLPRRGWTPRS
Trigger: ACTACGGGGTGTCCAGCCGCGACGCGGCAGAGGAGGATGAGCGCATGTACGGTAGCAGCAGCCGGTCCCGAATGGCGTCGGCATACAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp ACAGCTTCTCCCCACTGTATGCCGACGCCATTCGGGACCGGCTGCTaGTACCGTACATGCGCTCATCCTCCTCTGCCGCGTCGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: TASPHCMPTPFGTGC*YRTCAHPPLPRRGW
Trigger: CCAGCCGCGACGCGGCAGAGGAGGATGAGCGCATGTACGGTAGCAGCAGCCGGTCCCGAATGGCGTCGGCATACAGTGGGGAGAAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp TGGACAGCTTCTCCCCACTGTATGCCGACGCCATTCGGGACCGGCTaGTGCTACCGTACATGCGCTCATCCTCCTCTGCCGCGTCGCGGC +
Preference number: 5 (lower is better)
Translates to: WTASPHCMPTPFGTG*CYRTCAHPPLPRRG
Trigger: GCCGCGACGCGGCAGAGGAGGATGAGCGCATGTACGGTAGCAGCAGCCGGTCCCGAATGGCGTCGGCATACAGTGGGGAGAAGCTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp ACAGCCTGGGCCTCCAGTGAAGGGCGCAAGCTACTACCCACTTTGTaGAGCTCCGAGGGGCTGGGTGGACGTGGGCCTGTCACCCCTGCA +
Preference number: 5 (lower is better)
Translates to: TAWASSEGRKLLPTL*SSEGLGGRGPVTPA
Trigger: TGCAGGGGTGACAGGCCCACGTCCACCCAGCCCCTCGGAGCTCCACAAAGTGGGTAGTAGCTTGCGCCCTTCACTGGAGGCCCAGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CGCTCTGCGTGGTTGGCATGGGCGTTGGGGCTGCGTAATGGCCTGTaGGGTGGAAAGCCGGTTGGCTTGGCAGGCCAGGCTCAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: RSAWLAWALGLRNGL*GGKPVGLAGQAQLD
Trigger: ATCCAGCTGAGCCTGGCCTGCCAAGCCAACCGGCTTTCCACCCCACAGGCCATTACGCAGCCCCAACGCCCATGCCAACCACGCAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp AGTCTGCCGTGGCTTCTGGTGGGCAGCACGACTGTCAGCTTGCACTaGGAAAGGGGCGCTCTGCGTGGTTGGCATGGGCGTTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLPWLLVGSTTVSLH*ERGALRGWHGRWGC
Trigger: GCAGCCCCAACGCCCATGCCAACCACGCAGAGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGCTGCCCACCAGAAGCCACGGCAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp ACCTCTGCCATAGCAGCAGGGCAGAGTGGGTCCCTCAAGGACGGCTaGTTCCCCAGGATCCTTCCCGGGACGCCCACTGACTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: TSAIAAGQSGSLKDG*FPRILPGTPTDSTW
Trigger: CCAGGTGGAGTCAGTGGGCGTCCCGGGAAGGATCCTGGGGAACCAGCCGTCCTTGAGGGACCCACTCTGCCCTGCTGCTATGGCAGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp GTTGTGTCTGTGGCTGACGTGATGCTGTGCCCGAGGGTGTCTGCCTaGATGATGGTGGCTGCGACTGCTGCGGTCCTGGAGCCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: VVSVADVMLCPRVSA*MMVAATAAVLEPPA
Trigger: GGCAGGCGGCTCCAGGACCGCAGCAGTCGCAGCCACCATCATCCAGGCAGACACCCTCGGGCACAGCATCACGTCAGCCACAGACACAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTGGGTTGCCCCTTGCTaGGGGAAGGCTGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTWVAPC*GKAGPG
Trigger: CCCAGGGCCAGCCTTCCCCAAGCAAGGGGCAACCCA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGGGAACCGGGGCTGTaGGAAGGCAGTGGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHWEPGL*EGSGAR
Trigger: TCTGGCCCCACTGCCTTCCAACAGCCCCGGTTCCCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCGGGGTGGAAAGCCGGTaGGCTTGGCAGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPGVESR*AWQARL
Trigger: GAGCCTGGCCTGCCAAGCCAACCGGCTTTCCACCCC...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GCCCACCTCGGTACGGGGCTGTCTGGACAGCCTGCTCTACTTGCTTaGCCTGCGCCAGGCACACGGGGCTACCTGAACCCTGGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: AHLGTGLSGQPALLA*PAPGTRGYLNPGQS
Trigger: ACTTTGGCCAGGGTTCAGGTAGCCCCGTGTGCCTGGCGCAGGTCAAGCAAGTAGAGCAGGCTGTCCAGACAGCCCCGTACCGAGGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GGGAGTGAGGACGCCGTTTCTGGTCTTCAACCGCACTGCTGCTGCTaGGGGGTGGCTTGCTCCATTCCGCACTGGGAGCTACAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GSEDAVSGLQPHCCC*GVACSIPHWELQPG
Trigger: CCCAGGCTGTAGCTCCCAGTGCGGAATGGAGCAAGCCACCCCGCAGCAGCAGCAGTGCGGTTGAAGACCAGAAACGGCGTCCTCACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GATCTCCTCGTACACGGCCGCTCCAAGGCCTGCGGGCGTGCTTTCTaGCACCGGCTGAGAAGCCCTGCCGCCATAGTCATGGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: DLLVHGRSKACGRAF*HRLRSPAAIVMVLG
Trigger: ACCCAAGACCATGACTATGGCGGCAGGGCTTCTCAGCCGGTGGCAGAAAGCACGCCCGCAGGCCTTGGAGCGGCCGTGTACGAGGAGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CTGGGATGTCTGAAGGATCTCCTCGTACACGGCCGCTCCAAGGCCTaGGGGCGTGCTTTCTGCCACCGGCTGAGAAGCCCTGCCGCCATA +
Preference number: 5 (lower is better)
Translates to: LGCLKDLLVHGRSKA*GRAFCHRLRSPAAI
Trigger: TATGGCGGCAGGGCTTCTCAGCCGGTGGCAGAAAGCACGCCCGCAGGCCTTGGAGCGGCCGTGTACGAGGAGATCCTTCAGACATCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CCTCGGTACGGGGCTGTCTGGACAGCCTGCTCTACTTGCTTGACCTaGGCCAGGCACACGGGGCTACCTGAACCCTGGCCAAAGTCGAGG +
Preference number: 5 (lower is better)
Translates to: PRYGAVWTACSTCLT*ARHTGLPEPWPKSR
Trigger: CCTCGACTTTGGCCAGGGTTCAGGTAGCCCCGTGTGCCTGGCGCAGGTCAAGCAAGTAGAGCAGGCTGTCCAGACAGCCCCGTACCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCGGTGGCAGCCGTGATGTGGATGGCTGGAGAGACCCTGGGCAGCTaGTCGGGCTCGGTCTGGACGGAGCAGTCGCTGATGGTCTGTATG +
Preference number: 5 (lower is better)
Translates to: SVAAVMWMAGETLGS*SGSVWTEQSLMVCM
Trigger: CATACAGACCATCAGCGACTGCTCCGTCCAGACCGAGCCCGAGCAGCTGCCCAGGGTCTCTCCAGCCATCCACATCACGGCTGCCACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CATTCGGGACCGGCTGCTGCTACCGTACATGCGCTCATCCTCCTCTaGCGCGTCGCGGCTGGACACCCCGTAGTACCGCTGCTGTTCGTA +
Preference number: 5 (lower is better)
Translates to: HSGPAAATVHALILL*RVAAGHPVVPLLFV
Trigger: TACGAACAGCAGCGGTACTACGGGGTGTCCAGCCGCGACGCGGCAGAGGAGGATGAGCGCATGTACGGTAGCAGCAGCCGGTCCCGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GCAGGGCCTCGCTTCTGGGAGGAGGAGACTGTATGGCCCCCATGGTaGCTGAACCGGTCGGAGCGGGCATCTCGGGGCTTATCAAACCAG +
Preference number: 5 (lower is better)
Translates to: AGPRFWEEETVWPPW*LNRSERASRGLSNQ
Trigger: CTGGTTTGATAAGCCCCGAGATGCCCGCTCCGACCGGTTCAGGCACCATGGGGGCCATACAGTCTCCTCCTCCCAGAAGCGAGGCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp AGTGGGCAGGAGACAGGGCCGGGGAGTGTAGCTGCTGCTGGCTCTTaGACCGAGGCGCAGTGGTCATGTCCATTCCTAGGGCCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SGQETGPGSVAAAGS*TEAQWSCPFLGPSA
Trigger: TGCAGAGGGCCCTAGGAATGGACATGACCACTGCGCCTCGGTCCAAGAGCCAGCAGCAGCTACACTCCCCGGCCCTGTCTCCTGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp AGGACGCCGTTTCTGGTCTTCAACCGCACTGCTGCTGCTGCGGGGTaGCTTGCTCCATTCCGCACTGGGAGCTACAGCCTGGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RTPFLVFNRTAAAAG*LAPFRTGSYSLGLQ
Trigger: CTGGAGGCCCAGGCTGTAGCTCCCAGTGCGGAATGGAGCAAGCCACCCCGCAGCAGCAGCAGTGCGGTTGAAGACCAGAAACGGCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GCCGTACAGTGCCAGGGGTCCGTCTGTACCAGCACTGGGTGCTCGTaGAAAGCCAGGTGGCCCAGCCGGTTCCGAGGGCATTTGAGATGC +
Preference number: 5 (lower is better)
Translates to: AVQCQGSVCTSTGCS*KARWPSRFRGHLRC
Trigger: GCATCTCAAATGCCCTCGGAACCGGCTGGGCCACCTGGCTTTCCACGAGCACCCAGTGCTGGTACAGACGGACCCCTGGCACTGTACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TCAGCACCGGGCTCTGGCACTGGTCCTGGCTTCAGGCCCACACCCTaGGCGGTGCCCATCTGGGTGATCAGAATGTCCCTTCTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: SAPGSGTGPGFRPTP*AVPIWVIRMSLLAR
Trigger: TCTGGCCAGAAGGGACATTCTGATCACCCAGATGGGCACCGCCCAGGGTGTGGGCCTGAAGCCAGGACCAGTGCCAGAGCCCGGTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp ACAAGGTCAGGCCCACCACTCCCGCTGCCATGCCGCCCACCGTACTaGTCCATGGAGTTGAGGGCAGCACACATGCGGCTGATCTCTCGG +
Preference number: 5 (lower is better)
Translates to: TRSGPPLPLPCRPPY*SMELRAAHMRLISR
Trigger: CCGAGAGATCAGCCGCATGTGTGCTGCCCTCAACTCCATGGACCAGTACGGTGGGCGGCATGGCAGCGGGAGTGGTGGGCCTGACCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CTGCTGGTAGCTCAGGCCTTGGCGGACCTCCTGCCCCCGAGGCCTTaGCTGCAGCAGGCTTCCCCAAATAGACAGGTCCTTCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLVAQALADLLPPRP*LQQASPNRQVLQQV
Trigger: CACCTGCTGAAGGACCTGTCTATTTGGGGAAGCCTGCTGCAGCCAAGGCCTCGGGGGCAGGAGGTCCGCCAAGGCCTGAGCTACCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp AGCTTGCACTGGGAAAGGGGCGCTCTGCGTGGTTGGCATGGGCGTTaGGGCTGCGTAATGGCCTGTGGGGTGGAAAGCCGGTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SLHWERGALRGWHGR*GCVMACGVESRLAW
Trigger: CCAAGCCAACCGGCTTTCCACCCCACAGGCCATTACGCAGCCCCAACGCCCATGCCAACCACGCAGAGCGCCCCTTTCCCAGTGCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp GCCCGCGGTCCGTCCTTGACATGTTCCTGGACGTCAGGCATGGAATaGCTGGAGCAGAACTGTGGGCAGGTGTCCCCGGGAGGAAGAGCG +
Preference number: 5 (lower is better)
Translates to: ARGPSLTCSWTSGME*LEQNCGQVSPGGRA
Trigger: CGCTCTTCCTCCCGGGGACACCTGCCCACAGTTCTGCTCCAGCCATTCCATGCCTGACGTCCAGGAACATGTCAAGGACGGACCGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGCCACGGGGGCTTCCTaGATGACAGCAGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAATGAS*MTAGAV
Trigger: AACTGCCCCTGCTGTCATCAAGGAAGCCCCCGTGGC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGGTGCCGGTGTTCCTaGGCTGAGGTATGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHWCRCS*AEVCRP
Trigger: AGGCCGGCATACCTCAGCCAAGGAACACCGGCACCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp TCGCCTGGGTCAGCAGTGATGCTCCAAGGCCGAAGAGCTTCCCGGTaGGGCCTTCCTGGGTCTGTTCACCAGCACCAAGCCCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: SPGSAVMLQGRRASR*GLPGSVHQHQAQRA
Trigger: TGCCCTCTGGGCTTGGTGCTGGTGAACAGACCCAGGAAGGCCTCACCGGGAAGCTCTTCGGCCTTGGAGCATCACTGCTGACCCAGGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp AGGCAGTGCAGGTGTTGTAGTTGGCTGGGCCCCTGCTACCCATGTTaGGCTCGGCTTGGCACAGTGGGCAGGCGGAGGCCCTTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: RQCRCCSWLGPCYPC*ARLGTVGRRRPFPS
Trigger: CGAAGGAAAGGGCCTCCGCCTGCCCACTGTGCCAAGCCGAGCTCAACATGGGTAGCAGGGGCCCAGCCAACTACAACACCTGCACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp GGTGACAGGTTACTGGGTGGTGTCTTGGAGCGTTCACGCCGCCGCTaGGCTCGAAGCTCTTCCTTGTCACGCCGGGTCTTGCGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GDRLLGGVLERSRRR*ARSSSLSRRVLRAV
Trigger: CACAGCCCGCAAGACCCGGCGTGACAAGGAAGAGCTTCGAGCTCAGCGGCGGCGTGAACGCTCCAAGACACCACCCAGTAACCTGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GCCGTTTCTGGTCTTCAACCGCACTGCTGCTGCTGCGGGGTGGCTTaGTCCATTCCGCACTGGGAGCTACAGCCTGGGCCTCCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: AVSGLQPHCCCCGVA*SIPHWELQPGPPVK
Trigger: CTTCACTGGAGGCCCAGGCTGTAGCTCCCAGTGCGGAATGGAGCAAGCCACCCCGCAGCAGCAGCAGTGCGGTTGAAGACCAGAAACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GCGCCTCTTGGGTTCTTGGCTAGATTCCGGTCTGGGCCTGGCACTTaGCTTCTGGGCGCTGTGTTTGGCCAGGCCTCGTCCAGAGACAGC +
Preference number: 5 (lower is better)
Translates to: APLGFLARFRSGPGT*LLGAVFGQASSRDS
Trigger: GCTGTCTCTGGACGAGGCCTGGCCAAACACAGCGCCCAGAAGGCAAGTGCCAGGCCCAGACCGGAATCTAGCCAAGAACCCAAGAGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CACGCCGCCGCTGAGCTCGAAGCTCTTCCTTGTCACGCCGGGTCTTaGGGGCTGTGCTTCGAATTCGCTGCTGTTCCACCTCCCGCATCT +
Preference number: 5 (lower is better)
Translates to: HAAAELEALPCHAGS*GLCFEFAAVPPPAS
Trigger: AGATGCGGGAGGTGGAACAGCAGCGAATTCGAAGCACAGCCCGCAAGACCCGGCGTGACAAGGAAGAGCTTCGAGCTCAGCGGCGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCTGAAGGATCTCCTCGTACACGGCCGCTCCAAGGCCTGCGGGCGTaGTTTCTGCCACCGGCTGAGAAGCCCTGCCGCCATAGTCATGGT +
Preference number: 5 (lower is better)
Translates to: SEGSPRTRPLQGLRA*FLPPAEKPCRHSHG
Trigger: ACCATGACTATGGCGGCAGGGCTTCTCAGCCGGTGGCAGAAAGCACGCCCGCAGGCCTTGGAGCGGCCGTGTACGAGGAGATCCTTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp AGTGAAGTCTGCCGTGGCTTCTGGTGGGCAGCACGACTGTCAGCTTaGACTGGGAAAGGGGCGCTCTGCGTGGTTGGCATGGGCGTTGGG +
Preference number: 5 (lower is better)
Translates to: SEVCRGFWWAARLSA*TGKGALCVVGMGVG
Trigger: CCCAACGCCCATGCCAACCACGCAGAGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGCTGCCCACCAGAAGCCACGGCAGACTTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CCCTGGGTGTCAGCCTCTGGCTGCACAGACATAAGGGTGCTCGCCTaGGTCAGCAGTGATGCTCCAAGGCCGAAGAGCTTCCCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: PWVSASGCTDIRVLA*VSSDAPRPKSFPVR
Trigger: CCTCACCGGGAAGCTCTTCGGCCTTGGAGCATCACTGCTGACCCAGGCGAGCACCCTTATGTCTGTGCAGCCAGAGGCTGACACCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GCTCGGCTTGGCACAGTGGGCAGGCGGAGGCCCTTTCCTTCGGCATaGTCTTTGGCTTGGCAGCAGCCTTGGATGCTGCCTGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: ARLGTVGRRRPFPSA*SLAWQQPWMLPGVL
Trigger: CAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCCAAAGACCATGCCGAAGGAAAGGGCCTCCGCCTGCCCACTGTGCCAAGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp ATGTGGATGGCTGGAGAGACCCTGGGCAGCTGCTCGGGCTCGGTCTaGACGGAGCAGTCGCTGATGGTCTGTATGCCCACGCTGCTCATG +
Preference number: 5 (lower is better)
Translates to: MWMAGETLGSCSGSV*TEQSLMVCMPTLLM
Trigger: CATGAGCAGCGTGGGCATACAGACCATCAGCGACTGCTCCGTCCAGACCGAGCCCGAGCAGCTGCCCAGGGTCTCTCCAGCCATCCACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GAGCCGGTGTGGGGACAGGGGCGACACTGGAGAGTAGAGCACTTGTaGAGACTTAGGAGGCTGGCGGCTCACAAGCTGCGACAGGGACTC +
Preference number: 5 (lower is better)
Translates to: EPVWGQGRHWRVEHL*RLRRLAAHKLRQGL
Trigger: GAGTCCCTGTCGCAGCTTGTGAGCCGCCAGCCTCCTAAGTCTCCACAAGTGCTCTACTCTCCAGTGTCGCCCCTGTCCCCACACCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp GGTATGCTGACGGAGCCCGGGACGACTGTGAATAATCAGCAGAGCTaGGGTACCCGGGCTGACCCTTCTTCTGCATGGCAGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GMLTEPGTTVNNQQS*GTRADPSSAWQGQG
Trigger: GCCCTGCCCCTGCCATGCAGAAGAAGGGTCAGCCCGGGTACCCCAGCTCTGCTGATTATTCACAGTCGTCCCGGGCTCCGTCAGCATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CGTTGGGTGGCAGCGCCGACACATGAGCCTTGTTCAGCCTCTCACTaGAAGCAAACGAAGTGTCCAGGAGCCGGTGTGGGGACAGGGGCG +
Preference number: 5 (lower is better)
Translates to: RWVAAPTHEPCSASH*KQTKCPGAGVGTGA
Trigger: CGCCCCTGTCCCCACACCGGCTCCTGGACACTTCGTTTGCTTCCAGTGAGAGGCTGAACAAGGCTCATGTGTCGGCGCTGCCACCCAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCATCTTGGGTTGCCCCTaGCTTGGGGAAGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTILGCP*LGEGWP
Trigger: GGGCCAGCCTTCCCCAAGCAAGGGGCAACCCAAGAT...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGCGCTGCTAGAGGTCTaGCTGGGTTCAGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAALLEV*LGSVAL
Trigger: CAGGGCTACTGAACCCAGCAAGACCTCTAGCAGCGC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCTCAGCCTCCCCACCCTaGGGAGCTTCTGGAACAGGC +
Preference number: 5 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPSASPP*GASGTG
Trigger: GCCTGTTCCAGAAGCTCCCAAGGGTGGGGAGGCTGA...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCCGGAGCAGGCTGGCCTaGGTAGCAGGGACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPRSRLA*VAGTVV
Trigger: CACCACCGTCCCTGCTACCAAGGCCAGCCTGCTCCG...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGGGGTGGAAAGCCGGTaGGCTTGGCAGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPGVESR*AWQARL
Trigger: GAGCCTGGCCTGCCAAGCCAACCGGCTTTCCACCCC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAAGCACGACTGTCAGCTaGCACTGGGAAAGGGGCGCT +
Preference number: 5 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRASTTVS*HWERGA
Trigger: AGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGCT...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGCCGGGAGCCCTTTTaGCTCTCAGAGGCATGGTGG +
Preference number: 5 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHCREPF*LSEAWW
Trigger: CCACCATGCCTCTGAGAGCAAAAAGGGCTCCCGGCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATGCCGGGAGCCCTTTTaGCTCTCAGAGGCATGGTGG +
Preference number: 5 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRACREPF*LSEAWW
Trigger: CCACCATGCCTCTGAGAGCAAAAAGGGCTCCCGGCA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp AGCCTCTGGCTGCACAGACATAAGGGTGCTCGCCTGGGTCAGCAGTaGTGCTCCAAGGCCGAAGAGCTTCCCGGTGAGGCCTTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SLWLHRHKGARLGQQ*CSKAEELPGEAFLG
Trigger: ACCCAGGAAGGCCTCACCGGGAAGCTCTTCGGCCTTGGAGCATCACTGCTGACCCAGGCGAGCACCCTTATGTCTGTGCAGCCAGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp AGTTCCTCATCCGAGTCGAAGGCCTCGGGCGTGATGGACAGGGAGTaGGGACGCCGTTTCTGGTCTTCAACCGCACTGCTGCTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSSSESKASGVMDRE*GRRFWSSTALLLLR
Trigger: CCGCAGCAGCAGCAGTGCGGTTGAAGACCAGAAACGGCGTCCTCACTCCCTGTCCATCACGCCCGAGGCCTTCGACTCGGATGAGGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp GGTCCCGACTCTGGCTCACAGGCATCTCTCAGGCGTGGCATGGAGTaGCGTTTCTTGATGCCACTACGGCCTGCCTCCCACTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GPDSGSQASLRRGME*RFLMPLRPASHCSS
Trigger: CGAGGAGCAGTGGGAGGCAGGCCGTAGTGGCATCAAGAAACGTCACTCCATGCCACGCCTGAGAGATGCCTGTGAGCCAGAGTCGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CATACTGGCCAGCGGGTGTGGTGCAACCCTGGAGCCGCAGCTGGTTaGGCTCGCTGTCAGACAGGTAGTCACGATGCTCACCAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: HTGQRVWCNPGAAAG*ARCQTGSHDAHQGH
Trigger: GTGGCCTTGGTGAGCATCGTGACTACCTGTCTGACAGCGAGCTCAACCAGCTGCGGCTCCAGGGTTGCACCACACCCGCTGGCCAGTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GGCTTGGCAGCAGCCTTGGATGCTGCCTGGTGTTCTGCTCTGCCGTaGTTTGGACTGGCGGTTCCTCCAGTTTTTGCCAGGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GLAAALDAAWCSALP*FGLAVPPVFARAPG
Trigger: GCCTGGAGCCCTGGCAAAAACTGGAGGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CATCTGTCTGCACACTGCAGTCAGCACTGCGCCGCGTCCTGCGCCTaGGAGTCACAAGGTAGCGGCCCTCACCCTCCTCATCATCTGTCT +
Preference number: 5 (lower is better)
Translates to: HLSAHCSQHCAASCA*ESQGSGPHPPHHLS
Trigger: AGACAGATGATGAGGAGGGTGAGGGCCGCTACCTTGTGACTCGCAGGCGCAGGACGCGGCGCAGTGCTGACTGCAGTGTGCAGACAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CGGGTTGCTCCCAGTCGGCATTGTCCTCATCATCTGTCTGCACACTaGAGTCAGCACTGCGCCGCGTCCTGCGCCTGCGAGTCACAAGGT +
Preference number: 5 (lower is better)
Translates to: RVAPSRHCPHHLSAH*SQHCAASCACESQG
Trigger: ACCTTGTGACTCGCAGGCGCAGGACGCGGCGCAGTGCTGACTGCAGTGTGCAGACAGATGATGAGGACAATGCCGACTGGGAGCAACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CTGCGCTTTGAGGAGATGGCAGCTGGGGCCAGGCTCTTAGAGGGATaGTTTGGCCCCATGGGTCCTGGACCGTACTTGTCTGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: LRFEEMAAGARLLEG*FGPMGPGPYLSARA
Trigger: GGCTCGAGCAGACAAGTACGGTCCAGGACCCATGGGGCCAAAGCATCCCTCTAAGAGCCTGGCCCCAGCTGCCATCTCCTCAAAGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GCCTCGGCTGCTATAGTCATGGCTGGACAGCTTCTCCCCACTGTATaGCGACGCCATTCGGGACCGGCTGCTGCTACCGTACATGCGCTC +
Preference number: 5 (lower is better)
Translates to: ASAAIVMAGQLLPTV*RRHSGPAAATVHAL
Trigger: GAGCGCATGTACGGTAGCAGCAGCCGGTCCCGAATGGCGTCGGCATACAGTGGGGAGAAGCTGTCCAGCCATGACTATAGCAGCCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp TTGGCACAGTGGGCAGGCGGAGGCCCTTTCCTTCGGCATGGTCTTTaGCTTGGCAGCAGCCTTGGATGCTGCCTGGTGTTCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LAQWAGGGPFLRHGL*LGSSLGCCLVFCSA
Trigger: GGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCCAAAGACCATGCCGAAGGAAAGGGCCTCCGCCTGCCCACTGTGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp AGGGCGCAAGCTACTACCCACTTTGTGGAGCTCCGAGGGGCTGGGTaGACGTGGGCCTGTCACCCCTGCACTGTCAAGCTGTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: RAQATTHFVELRGAG*TWACHPCTVKLFHF
Trigger: GAAGTGGAACAGCTTGACAGTGCAGGGGTGACAGGCCCACGTCCACCCAGCCCCTCGGAGCTCCACAAAGTGGGTAGTAGCTTGCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GTGAAGGGCGCAAGCTACTACCCACTTTGTGGAGCTCCGAGGGGCTaGGTGGACGTGGGCCTGTCACCCCTGCACTGTCAAGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: VKGASYYPLCGAPRG*VDVGLSPLHCQAVP
Trigger: TGGAACAGCTTGACAGTGCAGGGGTGACAGGCCCACGTCCACCCAGCCCCTCGGAGCTCCACAAAGTGGGTAGTAGCTTGCGCCCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CAGAGCCAGCTGGGGAGGTTGGAGTCATATACCCTCGTGTCGGACTaGCTGTGGTGGCTGGTGACCCAGGACCCTGGGAGAAGGTCATGC +
Preference number: 5 (lower is better)
Translates to: QSQLGRLESYTLVSD*LWWLVTQDPGRRSC
Trigger: GCATGACCTTCTCCCAGGGTCCTGGGTCACCAGCCACCACAGCCAGTCCGACACGAGGGTATATGACTCCAACCTCCCCAGCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CAGGGGTCCGTCTGTACCAGCACTGGGTGCTCGTGGAAAGCCAGGTaGCCCAGCCGGTTCCGAGGGCATTTGAGATGCACTTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: QGSVCTSTGCSWKAR*PSRFRGHLRCTWRC
Trigger: ACACCTCCAAGTGCATCTCAAATGCCCTCGGAACCGGCTGGGCCACCTGGCTTTCCACGAGCACCCAGTGCTGGTACAGACGGACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TCATGGCCCTCGCAGTGGCGGCGGCCGTGGTGGATGAGGAAGCAGTaGCATCGTGCTTGCTGTCAGAGCCTGAGTCTGAGTGACGGGAAA +
Preference number: 5 (lower is better)
Translates to: SWPSQWRRPWWMRKQ*HRACCQSLSLSDGK
Trigger: TTTCCCGTCACTCAGACTCAGGCTCTGACAGCAAGCACGATGCCACTGCTTCCTCATCCACCACGGCCGCCGCCACTGCGAGGGCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GCCTGTGGGGTGGAAAGCCGGTTGGCTTGGCAGGCCAGGCTCAGCTaGATAACCAGTCCCAGGAGGGTAGGTAGGTGCTGGGTATGTGCT +
Preference number: 5 (lower is better)
Translates to: ACGVESRLAWQARLS*ITSPRRVGRCWVCA
Trigger: AGCACATACCCAGCACCTACCTACCCTCCTGGGACTGGTTATCCAGCTGAGCCTGGCCTGCCAAGCCAACCGGCTTTCCACCCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CCTCCTCAGATTCTTCCTCACCTCTGCCATAGCAGCAGGGCAGAGTaGGTCCCTCAAGGACGGCTGGTTCCCCAGGATCCTTCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: PPQILPHLCHSSRAE*VPQGRLVPQDPSRD
Trigger: GTCCCGGGAAGGATCCTGGGGAACCAGCCGTCCTTGAGGGACCCACTCTGCCCTGCTGCTATGGCAGAGGTGAGGAAGAATCTGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp ATAGGCCCTCCTCAGGGGGCTCATCGTAGTCATGGTAGCTGTGCCTaGCAGGGCCTCGCTTCTGGGAGGAGGAGACTGTATGGCCCCCAT +
Preference number: 5 (lower is better)
Translates to: IGPPQGAHRSHGSCA*QGLASGRRRLYGPH
Trigger: ATGGGGGCCATACAGTCTCCTCCTCCCAGAAGCGAGGCCCTGCCAGGCACAGCTACCATGACTACGATGAGCCCCCTGAGGAGGGCCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCCCTTCGGCATGGTCTTaGGCTTGGCAGCAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTPSAWS*AWQQPW
Trigger: CCAAGGCTGCTGCCAAGCCAAAGACCATGCCGAAGG...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACTGCAGCACATGCTGCTaGATGGTCTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHCSTCC*MVCSSC
Trigger: GCAGGAGCTGCAGACCATCAAGCAGCATGTGCTGCA...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTTGCGGACCAGGCCGTaGGGTGGCAGCGCCGACACC +
Preference number: 5 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTLRTRP*GGSADT
Trigger: GGTGTCGGCGCTGCCACCCAACGGCCTGGTCCGCAA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCACCTTGCTTCCGGTGCTaGCTGCGCTTTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAPCFRC*LRFEEM
Trigger: CATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGG...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp AGCCTGCTCTACTTGCTTGACCTGCGCCAGGCACACGGGGCTACCTaGACCCTGGCCAAAGTCGAGGCGGCTCTGGAAAGGATCTCCGTA +
Preference number: 5 (lower is better)
Translates to: SLLYLLDLRQAHGAT*TLAKVEAALERISV
Trigger: TACGGAGATCCTTTCCAGAGCCGCCTCGACTTTGGCCAGGGTTCAGGTAGCCCCGTGTGCCTGGCGCAGGTCAAGCAAGTAGAGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CGGCCATGGGCCATGCTCAGGGATGAGGGCTTGGAGCCCGCCTTTTaGAGTCGCTCTGCAGTGTCCCGTTCCCGTTCATACCCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RPWAMLRDEGLEPAF*SRSAVSRSRSYPLP
Trigger: AGGCAAAGGGTATGAACGGGAACGGGACACTGCAGAGCGACTTCAAAAGGCGGGCTCCAAGCCCTCATCCCTGAGCATGGCCCATGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp CCCTGCTGTTGCTGCTGCTGCTGTTGCTGCTGTTGTGTCTGTGGCTaGCGTGATGCTGTGCCCGAGGGTGTCTGCCTGGATGATGGTGGC +
Preference number: 5 (lower is better)
Translates to: PCCCCCCCCCCCVCG*RDAVPEGVCLDDGG
Trigger: GCCACCATCATCCAGGCAGACACCCTCGGGCACAGCATCACGTCAGCCACAGACACAACAGCAGCAACAGCAGCAGCAGCAACAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GGCCCTTTCCTTCGGCATGGTCTTTGGCTTGGCAGCAGCCTTGGATaGTGCCTGGTGTTCTGCTCTGCCGTGCTTTGGACTGGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: GPFLRHGLWLGSSLG*CLVFCSAVLWTGGS
Trigger: GGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCCAAAGACCATGCCGAAGGAAAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GTGGCAGGAAAGGGGGCCTTCTGCCTCTGCTTCTGCTCCTCCAGCTaGAGCTGCAGCTGCTGCTGCAGTTGCTGGATCTGCTCTAGTTGC +
Preference number: 5 (lower is better)
Translates to: VAGKGAFCLCFCSSS*SCSCCCSCWICSSC
Trigger: GCAACTAGAGCAGATCCAGCAACTGCAGCAGCAGCTGCAGCTGCAGCTGGAGGAGCAGAAGCAGAGGCAGAAGGCCCCCTTTCCTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GCTTGCTGTCAGAGCCTGAGTCTGAGTGACGGGAAAGACGAGACCTaGGGCGGCGGACGGGTTGCTCCCAGTCGGCATTGTCCTCATCAT +
Preference number: 5 (lower is better)
Translates to: ACCQSLSLSDGKDET*GGGRVAPSRHCPHH
Trigger: ATGATGAGGACAATGCCGACTGGGAGCAACCCGTCCGCCGCCGCAGGTCTCGTCTTTCCCGTCACTCAGACTCAGGCTCTGACAGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TGGGTGTCTGCCTTTGGCTGCAGTGCAGAAGGCCCAGTGTGGGCCTaGCGGGAGCCCTTTTTGCTCTCAGAGGCATGGTGGTATGCTGAC +
Preference number: 5 (lower is better)
Translates to: WVSAFGCSAEGPVWA*REPFLLSEAWWYAD
Trigger: GTCAGCATACCACCATGCCTCTGAGAGCAAAAAGGGCTCCCGGCAGGCCCACACTGGGCCTTCTGCACTGCAGCCAAAGGCAGACACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CTCTCGGGGGCTCTCTCGGCCAGGAGCAGTAGCAGATGCTTGCTTTaGGGTTGGAGAAGTTGTTCTCTGGCTGCCCAGGGGCTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: LSGALSARSSSRCLL*GWRSCSLAAQGLFG
Trigger: CCCAAAGAGCCCCTGGGCAGCCAGAGAACAACTTCTCCAACCCCAAAGCAAGCATCTGCTACTGCTCCTGGCCGAGAGAGCCCCCGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GGGCCGGGGAGTGTAGCTGCTGCTGGCTCTTGGACCGAGGCGCAGTaGTCATGTCCATTCCTAGGGCCCTCTGCATCTGACAGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: GPGSVAAAGSWTEAQ*SCPFLGPSASDSSN
Trigger: GTTTGAACTGTCAGATGCAGAGGGCCCTAGGAATGGACATGACCACTGCGCCTCGGTCCAAGAGCCAGCAGCAGCTACACTCCCCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CTGAAGACAATCTTGGGTTGCCCCTTGCTTGGGGAAGGCTGGCCCTaGGTGTCAGCCTCTGGCTGCACAGACATAAGGGTGCTCGCCTGG +
Preference number: 5 (lower is better)
Translates to: LKTILGCPLLGEGWP*VSASGCTDIRVLAW
Trigger: CCAGGCGAGCACCCTTATGTCTGTGCAGCCAGAGGCTGACACCCAGGGCCAGCCTTCCCCAAGCAAGGGGCAACCCAAGATTGTCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CAGCCTTGGATGCTGCCTGGTGTTCTGCTCTGCCGTGCTTTGGACTaGCGGTTCCTCCAGTTTTTGCCAGGGCTCCAGGCCCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: QPWMLPGVLLCRALD*RFLQFLPGLQALIQ
Trigger: CTGGATCAGGGCCTGGAGCCCTGGCAAAAACTGGAGGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GTTGCACACCTGGAGCTTGCAGGCAGTGCAGGTGTTGTAGTTGGCTaGGCCCCTGCTACCCATGTTGAGCTCGGCTTGGCACAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: VAHLELAGSAGVVVG*APATHVELGLAQWA
Trigger: TGCCCACTGTGCCAAGCCGAGCTCAACATGGGTAGCAGGGGCCCAGCCAACTACAACACCTGCACTGCCTGCAAGCTCCAGGTGTGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TTGGGTTCTTGGCTAGATTCCGGTCTGGGCCTGGCACTTGCCTTCTaGGCGCTGTGTTTGGCCAGGCCTCGTCCAGAGACAGCAGTGTCG +
Preference number: 5 (lower is better)
Translates to: LGSWLDSGLGLALAF*ALCLARPRPETAVS
Trigger: CGACACTGCTGTCTCTGGACGAGGCCTGGCCAAACACAGCGCCCAGAAGGCAAGTGCCAGGCCCAGACCGGAATCTAGCCAAGAACCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CAGCTGGGGAGGTTGGAGTCATATACCCTCGTGTCGGACTGGCTGTaGTGGCTGGTGACCCAGGACCCTGGGAGAAGGTCATGCCTACCT +
Preference number: 5 (lower is better)
Translates to: QLGRLESYTLVSDWL*WLVTQDPGRRSCLP
Trigger: AGGTAGGCATGACCTTCTCCCAGGGTCCTGGGTCACCAGCCACCACAGCCAGTCCGACACGAGGGTATATGACTCCAACCTCCCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GGCACTGGTCCTGGCTTCAGGCCCACACCCTGGGCGGTGCCCATCTaGGTGATCAGAATGTCCCTTCTGGCCAGAGGTGTTACTTGGTTG +
Preference number: 5 (lower is better)
Translates to: GTGPGFRPTPWAVPI*VIRMSLLARGVTWL
Trigger: CAACCAAGTAACACCTCTGGCCAGAAGGGACATTCTGATCACCCAGATGGGCACCGCCCAGGGTGTGGGCCTGAAGCCAGGACCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GCTGGGATCAGGTCCCGACTCTGGCTCACAGGCATCTCTCAGGCGTaGCATGGAGTGACGTTTCTTGATGCCACTACGGCCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: AGIRSRLWLTGISQA*HGVTFLDATTACLP
Trigger: TGGGAGGCAGGCCGTAGTGGCATCAAGAAACGTCACTCCATGCCACGCCTGAGAGATGCCTGTGAGCCAGAGTCGGGACCTGATCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp AGCAAACGAAGTGTCCAGGAGCCGGTGTGGGGACAGGGGCGACACTaGAGAGTAGAGCACTTGTGGAGACTTAGGAGGCTGGCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: SKRSVQEPVWGQGRH*RVEHLWRLRRLAAH
Trigger: GTGAGCCGCCAGCCTCCTAAGTCTCCACAAGTGCTCTACTCTCCAGTGTCGCCCCTGTCCCCACACCGGCTCCTGGACACTTCGTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CCCGTTCCCGTTCATACCCTTTGCCTCGGCTGCTATAGTCATGGCTaGACAGCTTCTCCCCACTGTATGCCGACGCCATTCGGGACCGGC +
Preference number: 5 (lower is better)
Translates to: PVPVHTLCLGCYSHG*TASPHCMPTPFGTG
Trigger: GCCGGTCCCGAATGGCGTCGGCATACAGTGGGGAGAAGCTGTCCAGCCATGACTATAGCAGCCGAGGCAAAGGGTATGAACGGGAACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp TCACGCTTATACGCGTGGGCCCGCGGTCCGTCCTTGACATGTTCCTaGACGTCAGGCATGGAATGGCTGGAGCAGAACTGTGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SRLYAWARGPSLTCS*TSGMEWLEQNCGQV
Trigger: CACCTGCCCACAGTTCTGCTCCAGCCATTCCATGCCTGACGTCCAGGAACATGTCAAGGACGGACCGCGGGCCCACGCGTATAAGCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp ATGCCTAGTTACGCTGCCATCCACGGGCTGGGAGAAGCCTCAGCCGGTGCCCACGCCCATAGCTGTGGATaGTGGAAGACGTTGATGGGC +
Preference number: 5 (lower is better)
Translates to: MPSYAAIHGLGEASAGAHAHSCG*WKTLMG
Trigger: GCCCATCAACGTCTTCCACAATCCACAGCTATGGGC...GTGGGCACCGGCTGAGGCTTCTCCCAGCCCGTGGATGGCAGCGTAACTAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCATGCTCCCAGTCGGCATaGTCCTCATCATCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRACSQSA*SSSSVC
Trigger: GCAGACAGATGATGAGGACAATGCCGACTGGGAGCA...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCCGGAGCAGGCTGGCCTaGGTAGCAGGGACGGTGGTG +
Preference number: 5 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTRSRLA*VAGTVV
Trigger: CACCACCGTCCCTGCTACCAAGGCCAGCCTGCTCCG...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATCCCGAGCGTGCGGTTaGGCAGCCCGCCGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGSRACG*AARRPG
Trigger: GCCAGGACGGCGGGCTGCCAAACCGCACGCTCGGGA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp CTGGTCCTGGCTTCAGGCCCACACCCTGGGCGGTGCCCATCTGGGTaGTCAGAATGTCCCTTCTGGCCAGAGGTGTTACTTGGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: LVLASGPHPGRCPSG*SECPFWPEVLLGWE
Trigger: TTCCCAACCAAGTAACACCTCTGGCCAGAAGGGACATTCTGATCACCCAGATGGGCACCGCCCAGGGTGTGGGCCTGAAGCCAGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp AGCGTCCATCAGCAAAGCCTAAGCTGTACGAGTGCTTCAGTGAGCTaGGGTCCACTGCCGAGTCCCTCCCAGGTCCCTGGAAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SVHQQSLSCTSASVS*GPLPSPSQVPGRAA
Trigger: GGCAGCTCTTCCAGGGACCTGGGAGGGACTCGGCAGTGGACCTCAGCTCACTGAAGCACTCGTACAGCTTAGGCTTTGCTGATGGACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CTGGCTCACAGGCATCTCTCAGGCGTGGCATGGAGTGACGTTTCTTaGTGCCACTACGGCCTGCCTCCCACTGCTCCTCGGTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LAHRHLSGVAWSDVS*CHYGLPPTAPRFAV
Trigger: CACTGCAAACCGAGGAGCAGTGGGAGGCAGGCCGTAGTGGCATCAAGAAACGTCACTCCATGCCACGCCTGAGAGATGCCTGTGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp TGTCTGGCAGGCCAGGCTCTCCCCGCGCCCAGTCTTTTCTGGTGCTaGTATGTACCTGACAATCTCCACCTTTGGGTCGGTGGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: CLAGQALPAPSLFWC*YVPDNLHLWVGGSR
Trigger: ACGGCTGCCACCGACCCAAAGGTGGAGATTGTCAGGTACATATCAGCACCAGAAAAGACTGGGCGCGGGGAGAGCCTGGCCTGCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp TGTAGCCCTCCTCACGCTTATACGCGTGGGCCCGCGGTCCGTCCTTaGCATGTTCCTGGACGTCAGGCATGGAATGGCTGGAGCAGAACT +
Preference number: 5 (lower is better)
Translates to: CSPPHAYTRGPAVRP*HVPGRQAWNGWSRT
Trigger: AGTTCTGCTCCAGCCATTCCATGCCTGACGTCCAGGAACATGTCAAGGACGGACCGCGGGCCCACGCGTATAAGCGTGAGGAGGGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp CCTTTCCTTCGGCATGGTCTTTGGCTTGGCAGCAGCCTTGGATGCTaGCTGGTGTTCTGCTCTGCCGTGCTTTGGACTGGCGGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PFLRHGLWLGSSLGC*LVFCSAVLWTGGSS
Trigger: GGAGGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCCAAAGACCATGCCGAAGGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GCTGAGCTCGAAGCTCTTCCTTGTCACGCCGGGTCTTGCGGGCTGTaGTTCGAATTCGCTGCTGTTCCACCTCCCGCATCTTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: AELEALPCHAGSCGL*FEFAAVPPPASSPA
Trigger: AGCAGGAGAAGATGCGGGAGGTGGAACAGCAGCGAATTCGAAGCACAGCCCGCAAGACCCGGCGTGACAAGGAAGAGCTTCGAGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp ACTGCTTTGGCCAGGCAGGGCTGTATCGGTCACACTCTTGTCGGGTaGGCTAGGGGCAGGATGGAAGGTGCCAGTGCAGCTACTGCCAAA +
Preference number: 5 (lower is better)
Translates to: TALARQGCIGHTLVG*ARGRMEGASAATAK
Trigger: TTTGGCAGTAGCTGCACTGGCACCTTCCATCCTGCCCCTAGCGCACCCGACAAGAGTGTGACCGATACAGCCCTGCCTGGCCAAAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCGGACAGAGACCGCTGCAGGGTCTTCATGGGGCGAGGCAGAGTCTaGTGGCGAAGGGTGCTGTCAGCTATGAATTGCTTCTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: SDRDRCRVFMGRGRV*WRRVLSAMNCFWGL
Trigger: GAGTCCCCAGAAGCAATTCATAGCTGACAGCACCCTTCGCCAGCAGACTCTGCCTCGCCCCATGAAGACCCTGCAGCGGTCTCTGTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CAAGCTACTACCCACTTTGTGGAGCTCCGAGGGGCTGGGTGGACGTaGGCCTGTCACCCCTGCACTGTCAAGCTGTTCCACTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QATTHFVELRGAGWT*ACHPCTVKLFHFLL
Trigger: CAGCAAGAAGTGGAACAGCTTGACAGTGCAGGGGTGACAGGCCCACGTCCACCCAGCCCCTCGGAGCTCCACAAAGTGGGTAGTAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TACCCTCGTGTCGGACTGGCTGTGGTGGCTGGTGACCCAGGACCCTaGGAGAAGGTCATGCCTACCTCCTTAGAGGTCAAAGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: YPRVGLAVVAGDPGP*EKVMPTSLEVKVEE
Trigger: CTCCTCCACTTTGACCTCTAAGGAGGTAGGCATGACCTTCTCCCAGGGTCCTGGGTCACCAGCCACCACAGCCAGTCCGACACGAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CTGTACATGCCACCACGCACCATGGGCCGCAGTACCGAGGCAGGCTaGGTGGTGATGGGCAGCGTTGCAGCAATTGGGGTATTGATAGTC +
Preference number: 5 (lower is better)
Translates to: LYMPPRTMGRSTEAG*VVMGSVAAIGVLIV
Trigger: GACTATCAATACCCCAATTGCTGCAACGCTGCCCATCACCACCCAGCCTGCCTCGGTACTGCGGCCCATGGTGCGTGGTGGCATGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp ACTTTCTGCTCCAGATCAGCCAGTGAAGTCTGCCGTGGCTTCTGGTaGGCAGCACGACTGTCAGCTTGCACTGGGAAAGGGGCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TFCSRSASEVCRGFW*AARLSACTGKGALC
Trigger: GCAGAGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGCTGCCCACCAGAAGCCACGGCAGACTTCACTGGCTGATCTGGAGCAGAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp GGAACTTTCTGCTCCAGATCAGCCAGTGAAGTCTGCCGTGGCTTCTaGTGGGCAGCACGACTGTCAGCTTGCACTGGGAAAGGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: GTFCSRSASEVCRGF*WAARLSACTGKGAL
Trigger: GAGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGCTGCCCACCAGAAGCCACGGCAGACTTCACTGGCTGATCTGGAGCAGAAAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTCGGCCACCCCGGTCTTaGGCCAACGACTCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRRPPRS*ANDSLR
Trigger: GCGCAAGGAGTCGTTGGCCAAAGACCGGGGTGGCCG...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCAGCCGCCTGCCGACCTaGCATCTGTGGCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLSRLPT*HLWLSL
Trigger: CAGGCTCAGCCACAGATGCAAGGTCGGCAGGCGGCT...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp TCCAGAACTGGGCGTGGTGGAACTGCCCGAAGGGGTCTCAGTCGGTaGGTAGAGAGACATAAAGGCCGGCAGGTTGTACTCGCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: SRTGRGGTARRGLSR*VERHKGRQVVLAAR
Trigger: TCTGGCAGCGAGTACAACCTGCCGGCCTTTATGTCTCTCTACTCACCGACTGAGACCCCTTCGGGCAGTTCCACCACGCCCAGTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CGCTCTCGGCATTCAGAAACTGCTTCTCCTTCTTTTTGTCCTCAGTaGAGCCCAGATCCCGCGAGGAGGCCTGCCGCATCCGGGCTATGC +
Preference number: 5 (lower is better)
Translates to: RSRHSETASPSFCPQ*SPDPARRPAASGLC
Trigger: GCATAGCCCGGATGCGGCAGGCCTCCTCGCGGGATCTGGGCTTCACTGAGGACAAAAAGAAGGAGAAGCAGTTTCTGAATGCCGAGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp GGTTGGAGTCATATACCCTCGTGTCGGACTGGCTGTGGTGGCTGGTaGCCCAGGACCCTGGGAGAAGGTCATGCCTACCTCCTTAGAGGT +
Preference number: 5 (lower is better)
Translates to: GWSHIPSCRTGCGGW*PRTLGEGHAYLLRG
Trigger: ACCTCTAAGGAGGTAGGCATGACCTTCTCCCAGGGTCCTGGGTCACCAGCCACCACAGCCAGTCCGACACGAGGGTATATGACTCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCTTTGGCTTGGCAGCAGCCTTGGATGCTGCCTGGTGTTCTGCTCTaGCGTGCTTTGGACTGGCGGTTCCTCCAGTTTTTGCCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SLAWQQPWMLPGVLL*RALDWRFLQFLPGL
Trigger: GAGCCCTGGCAAAAACTGGAGGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCCAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CTCCAAGGCCTGCGGGCGTGCTTTCTGCCACCGGCTGAGAAGCCCTaGCGCCATAGTCATGGTCTTGGGTGTCTTGATATTCAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: LQGLRACFLPPAEKP*RHSHGLGCLDIQRS
Trigger: GCTCCTTTGAATATCAAGACACCCAAGACCATGACTATGGCGGCAGGGCTTCTCAGCCGGTGGCAGAAAGCACGCCCGCAGGCCTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCCCACGGGGGTCATATGAGTCCTCCTCAGATTCTTCCTCACCTCTaGCATAGCAGCAGGGCAGAGTGGGTCCCTCAAGGACGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: SHGGHMSPPQILPHL*HSSRAEWVPQGRLV
Trigger: AACCAGCCGTCCTTGAGGGACCCACTCTGCCCTGCTGCTATGGCAGAGGTGAGGAAGAATCTGAGGAGGACTCATATGACCCCCGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GCCTCCTCGATGGGTGAGAACTTGGAGATCTTTTGCTCCATGCCTTaGTTCCGGTGCTTGCTGCGCTTTGAGGAGATGGCAGCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: ASSMGENLEIFCSMP*FRCLLRFEEMAAGA
Trigger: GGCCCCAGCTGCCATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTTCTCACCCATCGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp GTCGCTCTGCAGTGTCCCGTTCCCGTTCATACCCTTTGCCTCGGCTaGTATAGTCATGGCTGGACAGCTTCTCCCCACTGTATGCCGACG +
Preference number: 5 (lower is better)
Translates to: VALQCPVPVHTLCLG*YSHGWTASPHCMPT
Trigger: CGTCGGCATACAGTGGGGAGAAGCTGTCCAGCCATGACTATAGCAGCCGAGGCAAAGGGTATGAACGGGAACGGGACACTGCAGAGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CTCCTTGCTGGCATCACTGAAGACAATCTTGGGTTGCCCCTTGCTTaGGGAAGGCTGGCCCTGGGTGTCAGCCTCTGGCTGCACAGACAT +
Preference number: 5 (lower is better)
Translates to: LLAGITEDNLGLPLA*GRLALGVSLWLHRH
Trigger: ATGTCTGTGCAGCCAGAGGCTGACACCCAGGGCCAGCCTTCCCCAAGCAAGGGGCAACCCAAGATTGTCTTCAGTGATGCCAGCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TCCTTCGGCATGGTCTTTGGCTTGGCAGCAGCCTTGGATGCTGCCTaGTGTTCTGCTCTGCCGTGCTTTGGACTGGCGGTTCCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SFGMVFGLAAALDAA*CSALPCFGLAVPPV
Trigger: AACTGGAGGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCCAAAGACCATGCCGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GCTGGAGACACCGTCGGAGGAGTAGCCTGTGTCACTGAGGCTCTGTaGGCTTCGAGACAGGTCCTGAGAATAAGGCTTGGGGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: AGDTVGGVACVTEAL*ASRQVLRIRLGDWF
Trigger: GAACCAGTCCCCAAGCCTTATTCTCAGGACCTGTCTCGAAGCCCACAGAGCCTCAGTGACACAGGCTACTCCTCCGACGGTGTCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TCTACTTGCTTGACCTGCGCCAGGCACACGGGGCTACCTGAACCCTaGCCAAAGTCGAGGCGGCTCTGGAAAGGATCTCCGTATACCACT +
Preference number: 5 (lower is better)
Translates to: STCLTCARHTGLPEP*PKSRRLWKGSPYTT
Trigger: AGTGGTATACGGAGATCCTTTCCAGAGCCGCCTCGACTTTGGCCAGGGTTCAGGTAGCCCCGTGTGCCTGGCGCAGGTCAAGCAAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GACAGAGACCGCTGCAGGGTCTTCATGGGGCGAGGCAGAGTCTGCTaGCGAAGGGTGCTGTCAGCTATGAATTGCTTCTGGGGACTCACA +
Preference number: 5 (lower is better)
Translates to: DRDRCRVFMGRGRVC*RRVLSAMNCFWGLT
Trigger: TGTGAGTCCCCAGAAGCAATTCATAGCTGACAGCACCCTTCGCCAGCAGACTCTGCCTCGCCCCATGAAGACCCTGCAGCGGTCTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTGGCTCCCGGTCCAGGTaGGGATCAGGACCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRGSRSR*GSGPWP
Trigger: TGGCCAAGGTCCTGATCCCAACCTGGACCGGGAGCC...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TGGCCATGTGGACGTCTGCTCCAGTGTCACCCCCAGAGCAGGGTGACGAGGGCAGTCTGCTCTTGGGCATaGAGGTTGATAACCAAAGGC +
Preference number: 5 (lower is better)
Translates to: WPCGRLLQCHPQSRVTRAVCSWA*RLITKG
Trigger: GCCTTTGGTTATCAACCTCAATGCCCAAGAGCAGAC...TGCCCTCGTCACCCTGCTCTGGGGGTGACACTGGAGCAGACGTCCACATGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCAGTGTCCGCTTCACCTaGCGGACCAGGCCGTTGGGT +
Preference number: 5 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLSVRFT*RTRPLG
Trigger: ACCCAACGGCCTGGTCCGCAAGGTGAAGCGGACACT...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp GAGCAGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTGGTTGGCATGGGCGTaGGGGCTGCGTAATGGCCTG +
Preference number: 5 (lower is better)
Translates to: EQSQSRSGNHRAQPGSLGWLAWA*GLRNGL
Trigger: CAGGCCATTACGCAGCCCCAACGCCCATGCCAACCA...GCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCGCCCGCGGTCCGTCCTaGACATGTTCCTGGACGTCA +
Preference number: 5 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTARGPS*TCSWTS
Trigger: TGACGTCCAGGAACATGTCAAGGACGGACCGCGGGC...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCTGGTGCCGGTGTTCCTaGGCTGAGGTATGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTWCRCS*AEVCRP
Trigger: AGGCCGGCATACCTCAGCCAAGGAACACCGGCACCA...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTCCCTGCTGGGGCGCTTaGGCTGCGGGTGGTTTAGAG +
Preference number: 5 (lower is better)
Translates to: KPTECPYTCILCGLPSLSPCWGA*AAGGLE
Trigger: CTCTAAACCACCCGCAGCCAAAGCGCCCCAGCAGGG...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp CCCCTGCACTGTCAAGCTGTTCCACTTCTTGCTGTACAACACCTGTaGTCTCGCTCTGGGAGCTGGAGACACCGTCGGAGGAGTAGCCTG +
Preference number: 5 (lower is better)
Translates to: PLHCQAVPLLAVQHL*SRSGSWRHRRRSSL
Trigger: CAGGCTACTCCTCCGACGGTGTCTCCAGCTCCCAGAGCGAGATCACAGGTGTTGTACAGCAAGAAGTGGAACAGCTTGACAGTGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp GGAGATCTTTTGCTCCATGCCTTGCTTCCGGTGCTTGCTGCGCTTTaGGGAGATGGCAGCTGGGGCCAGGCTCTTAGAGGGATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: GDLLLHALLPVLAAL*GDGSWGQALRGMLW
Trigger: CCAAAGCATCCCTCTAAGAGCCTGGCCCCAGCTGCCATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGGCATGGAGCAAAAGATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp CATGGTCTTTGGCTTGGCAGCAGCCTTGGATGCTGCCTGGTGTTCTaGTCTGCCGTGCTTTGGACTGGCGGTTCCTCCAGTTTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: HGLWLGSSLGCCLVF*SAVLWTGGSSSFCQ
Trigger: CTGGCAAAAACTGGAGGAACCGCCAGTCCAAAGCACGGCAGAGCAGAACACCAGGCAGCATCCAAGGCTGCTGCCAAGCCAAAGACCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TTTGTGGAGCTCCGAGGGGCTGGGTGGACGTGGGCCTGTCACCCCTaGACTGTCAAGCTGTTCCACTTCTTGCTGTACAACACCTGTGAT +
Preference number: 5 (lower is better)
Translates to: FVELRGAGWTWACHP*TVKLFHFLLYNTCD
Trigger: ATCACAGGTGTTGTACAGCAAGAAGTGGAACAGCTTGACAGTGCAGGGGTGACAGGCCCACGTCCACCCAGCCCCTCGGAGCTCCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GACGCCAGAGTGATGACCATAATAGGGGCCTCCTGGGAAGACTGCTaGCACACCAATCGAGGAGTGCTAGGTCGGTGTGGAGTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: DARVMTIIGASWEDC*HTNRGVLGRCGVCV
Trigger: CACACAGACTCCACACCGACCTAGCACTCCTCGATTGGTGTGGCAGCAGTCTTCCCAGGAGGCCCCTATTATGGTCATCACTCTGGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCCGACGCCAGAGTGATGACCATAATAGGGGCCTCCTGGGAAGACTaGTGCCACACCAATCGAGGAGTGCTAGGTCGGTGTGGAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SDARVMTIIGASWED*CHTNRGVLGRCGVC
Trigger: ACAGACTCCACACCGACCTAGCACTCCTCGATTGGTGTGGCAGCAGTCTTCCCAGGAGGCCCCTATTATGGTCATCACTCTGGCGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp AGTGCAGCTACTGCCAAAAGGAAACTTGTAGACCATGTCACAGCATaGCAGCTGGCTCTCGGGCCTCATTCCGGTGAGGTCCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: SAATAKRKLVDHVTA*QLALGPHSGEVQGT
Trigger: GGTGCCCTGGACCTCACCGGAATGAGGCCCGAGAGCCAGCTGGCATGCTGTGACATGGTCTACAAGTTTCCTTTTGGCAGTAGCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CATGGGCCGCAGTACCGAGGCAGGCTGGGTGGTGATGGGCAGCGTTaGAGCAATTGGGGTATTGATAGTCGAATAGATCATGCCATCGGC +
Preference number: 5 (lower is better)
Translates to: HGPQYRGRLGGDGQR*SNWGIDSRIDHAIG
Trigger: GCCGATGGCATGATCTATTCGACTATCAATACCCCAATTGCTGCAACGCTGCCCATCACCACCCAGCCTGCCTCGGTACTGCGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp CACTGTCACCGTAATAGTGGGTGCTTGGCCGGCCGTTGCTCTCCATaGTCCGGTGATGACCAGATTTCCCACGGGGGTCATATGAGTCCT +
Preference number: 5 (lower is better)
Translates to: HCHRNSGCLAGRCSP*SGDDQISHGGHMSP
Trigger: AGGACTCATATGACCCCCGTGGGAAATCTGGTCATCACCGGAGCATGGAGAGCAACGGCCGGCCAAGCACCCACTATTACGGTGACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp CTGCTCGAGCCCCGTGTCTATAGTCACTGTCACCGTAATAGTGGGTaGTTGGCCGGCCGTTGCTCTCCATGCTCCGGTGATGACCAGATT +
Preference number: 5 (lower is better)
Translates to: LLEPRVYSHCHRNSG*LAGRCSPCSGDDQI
Trigger: AATCTGGTCATCACCGGAGCATGGAGAGCAACGGCCGGCCAAGCACCCACTATTACGGTGACAGTGACTATAGACACGGGGCTCGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CAGTACCGAGGCAGGCTGGGTGGTGATGGGCAGCGTTGCAGCAATTaGGGTATTGATAGTCGAATAGATCATGCCATCGGCTGCGCGCAC +
Preference number: 5 (lower is better)
Translates to: QYRGRLGGDGQRCSN*GIDSRIDHAIGCAH
Trigger: GTGCGCGCAGCCGATGGCATGATCTATTCGACTATCAATACCCCAATTGCTGCAACGCTGCCCATCACCACCCAGCCTGCCTCGGTACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GCTGTCTGCAATTCTCCTGACCGTGCTGGGATCAGGTCCCGACTCTaGCTCACAGGCATCTCTCAGGCGTGGCATGGAGTGACGTTTCTT +
Preference number: 5 (lower is better)
Translates to: AVCNSPDRAGIRSRL*LTGISQAWHGVTFL
Trigger: AAGAAACGTCACTCCATGCCACGCCTGAGAGATGCCTGTGAGCCAGAGTCGGGACCTGATCCCAGCACGGTCAGGAGAATTGCAGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GTTCAGCCTCTCACTGGAAGCAAACGAAGTGTCCAGGAGCCGGTGTaGGGACAGGGGCGACACTGGAGAGTAGAGCACTTGTGGAGACTT +
Preference number: 5 (lower is better)
Translates to: VQPLTGSKRSVQEPV*GQGRHWRVEHLWRL
Trigger: AAGTCTCCACAAGTGCTCTACTCTCCAGTGTCGCCCCTGTCCCCACACCGGCTCCTGGACACTTCGTTTGCTTCCAGTGAGAGGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp TCGAGCCCCGTGTCTATAGTCACTGTCACCGTAATAGTGGGTGCTTaGCCGGCCGTTGCTCTCCATGCTCCGGTGATGACCAGATTTCCC +
Preference number: 5 (lower is better)
Translates to: SSPVSIVTVTVIVGA*PAVALHAPVMTRFP
Trigger: GGGAAATCTGGTCATCACCGGAGCATGGAGAGCAACGGCCGGCCAAGCACCCACTATTACGGTGACAGTGACTATAGACACGGGGCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACCTGAGCCTGGGGGTCTaGGACCCGCCTCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHLSLGV*DPPPCW
Trigger: CCAGCAAGGAGGCGGGTCCAAGACCCCCAGGCTCAG...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTGTCTGGGCCTGGCACTaGCCTTCTGGGCGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRVWAWH*PSGRCV
Trigger: AACACAGCGCCCAGAAGGCAAGTGCCAGGCCCAGAC...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCAACACAGCTTGAAGTGTCCCAACCACAGCTGCCGATGGTGGGACAGGATCCCGGGCAGCTCCTCCGTTaGAGACCCATAGTTAGCAGT +
Preference number: 5 (lower is better)
Translates to: PTQLEVSQPQLPMVGQDPGQLLR*RPIVSS
Trigger: ACTGCTAACTATGGGTCTCAAACGGAGGAGCTGCCC...GGGATCCTGTCCCACCATCGGCAGCTGTGGTTGGGACACTTCAAGCTGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACACAGGCTCACGAGGTaGCCCGGGCCCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEHRLTR*PGPFSP
Trigger: GGGACTGAAGGGCCCGGGCAACCTCGTGAGCCTGTG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TACTTATGCCTCAGAGGAGGCAAGTCCTGGGGCAGATGTGGAGAGGGTTACACCAGCACGACTGTCAGCTaGCACTGGGAAAGGGGCGCT +
Preference number: 5 (lower is better)
Translates to: YLCLRGGKSWGRCGEGYTSTTVS*HWERGA
Trigger: AGCGCCCCTTTCCCAGTGCAAGCTGACAGTCGTGCT...GGTGTAACCCTCTCCACATCTGCCCCAGGACTTGCCTCCTCTGAGGCATAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGTCCAGGTCCTGGAGTaGTCTGCGCCTGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASVQVLE*SAPEEP
Trigger: GGGCTCCTCAGGCGCAGACAACTCCAGGACCTGGAC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp AGCAGTGGTTGGGGGCTGCCCATAGCTGTGGATTGTGGAAGACGTTaGTGGGCTACGCTCAGAGCCAGCTGGGGAGGTTGGAGTCATATA +
Preference number: 5 (lower is better)
Translates to: SSGWGLPIAVDCGRR*WATLRASWGGWSHI
Trigger: TATATGACTCCAACCTCCCCAGCTGGCTCTGAGCGTAGCCCATCAACGTCTTCCACAATCCACAGCTATGGGCAGCCCCCAACCACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CACCCTCCTCATCATCTGTCTGAACACTGCTGTCTGCAATTCTCCTaGCCGTGCTGGGATCAGGTCCCGACTCTGGCTCACAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: HPPHHLSEHCCLQFS*PCWDQVPTLAHRHL
Trigger: GAGATGCCTGTGAGCCAGAGTCGGGACCTGATCCCAGCACGGTCAGGAGAATTGCAGACAGCAGTGTTCAGACAGATGATGAGGAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CAGCTGGACCACTGTAGCCGGTTTCAGGGGGCGCTGAAGACATGGTaGCAGCAGGGCTGCCAATCACCTCGTAATTGGTGGGAACTTTCT +
Preference number: 5 (lower is better)
Translates to: QLDHCSRFQGALKTW*QQGCQSPRNWWELS
Trigger: AGAAAGTTCCCACCAATTACGAGGTGATTGGCAGCCCTGCTGTCACCATGTCTTCAGCGCCCCCTGAAACCGGCTACAGTGGTCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GCTCTCCATGCTCCGGTGATGACCAGATTTCCCACGGGGGTCATATaGGTCCTCCTCAGATTCTTCCTCACCTCTGCCATAGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: ALHAPVMTRFPTGVI*VLLRFFLTSAIAAG
Trigger: CCCTGCTGCTATGGCAGAGGTGAGGAAGAATCTGAGGAGGACTCATATGACCCCCGTGGGAAATCTGGTCATCACCGGAGCATGGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp AAGGTATGGGTCTGCTCTTGGGCATTGAGGTTGATAACCAAAGGCTaGACAGCGGTTGACTGGCGTCCTGAGACTGGATCCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KVWVCSWALRLITKG*TAVDWRPETGSRAR
Trigger: CCTGGCCCTGGATCCAGTCTCAGGACGCCAGTCAACCGCTGTGCAGCCTTTGGTTATCAACCTCAATGCCCAAGAGCAGACCCATACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp GTCTATAGTCACTGTCACCGTAATAGTGGGTGCTTGGCCGGCCGTTaGTCTCCATGCTCCGGTGATGACCAGATTTCCCACGGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: VYSHCHRNSGCLAGR*SPCSGDDQISHGGH
Trigger: ATGACCCCCGTGGGAAATCTGGTCATCACCGGAGCATGGAGAGCAACGGCCGGCCAAGCACCCACTATTACGGTGACAGTGACTATAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp CCTTGGCCTCCTCGATGGGTGAGAACTTGGAGATCTTTTGCTCCATaGCTTGCTTCCGGTGCTTGCTGCGCTTTGAGGAGATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PWPPRWVRTWRSFAP*LASGACCALRRWQL
Trigger: CAGCTGCCATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTTCTCACCCATCGAGGAGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp TTCGGCACAGGCTCAGCTTTAGCAGAGGTCACTGTCTTCTTTTCCTaGGCGCTGCTAGAGGTCTTGCTGGGTTCAGTAGCCCTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: FGTGSALAEVTVFFS*ALLEVLLGSVALRG
Trigger: GCCTCTCAGGGCTACTGAACCCAGCAAGACCTCTAGCAGCGCCCAGGAAAAGAAGACAGTGACCTCTGCTAAAGCTGAGCCTGTGCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CCATACTTCCTTGCTTCCACAGCAAGAGAGGTCAGATCCATACCCTaGTCGGTAAGGATAATGGGGGTGGGCTTGACGGCTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: PYFLASTAREVRSIP*SVRIMGVGLTAVRR
Trigger: CCTCCGCACAGCCGTCAAGCCCACCCCCATTATCCTTACCGACCAGGGTATGGATCTGACCTCTCTTGCTGTGGAAGCAAGGAAGTATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp ATGCTCACCGTGGTGGCAGTGGCCAGGAAGGTATGGGTCTGCTCTTaGGCATTGAGGTTGATAACCAAAGGCTGCACAGCGGTTGACTGG +
Preference number: 5 (lower is better)
Translates to: MLTVVAVARKVWVCS*ALRLITKGCTAVDW
Trigger: CCAGTCAACCGCTGTGCAGCCTTTGGTTATCAACCTCAATGCCCAAGAGCAGACCCATACCTTCCTGGCCACTGCCACCACGGTGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp GGGGATAGGAGGCCAGGTCGGATTCCACATCCTTGGCCTCCTCGATaGGTGAGAACTTGGAGATCTTTTGCTCCATGCCTTGCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: GDRRPGRIPHPWPPR*VRTWRSFAPCLASG
Trigger: ACCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTTCTCACCCATCGAGGAGGCCAAGGATGTGGAATCCGACCTGGCCTCCTATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCAAGCTGCTGCTGGCTCTaGGACCGAGGCGCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGASCCWL*DRGAVV
Trigger: GACCACTGCGCCTCGGTCCAAGAGCCAGCAGCAGCT...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCGGTTCCTCCAGTTTTaGCCAGGGCTCCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LSKAGSLERHERSPKPMVRFLQF*PGLQAL
Trigger: CAGGGCCTGGAGCCCTGGCAAAAACTGGAGGAACCG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTCCCCTGCTACCCATGTaGAGCTCGGCTTGGCACAGT +
Preference number: 5 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRPLLPM*SSAWHS
Trigger: ACTGTGCCAAGCCGAGCTCAACATGGGTAGCAGGGG...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TTCTATGGCTCTCCAGTGCCACCCGGTGCACATGGTAGCAGGGTGCTGGCACCCCACCATTTTGCTTCATaGGGTCCATGTATGCGCTCT +
Preference number: 5 (lower is better)
Translates to: FYGSPVPPGAHGSRVLAPHHFAS*GPCMRS
Trigger: AGAGCGCATACATGGACCCAATGAAGCAAAATGGTG...GGGTGCCAGCACCCTGCTACCATGTGCACCGGGTGGCACTGGAGAGCCATAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTTGGAGTCTGTGTGCCTaGGGCTACCATGGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASWSLCA*GYHGGG
Trigger: CCCTCCCCCATGGTAGCCCAAGGCACACAGACTCCA...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTAGTGTCCGCTTCACCTaGCGGACCAGGCCGTTGGGT +
Preference number: 5 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASSVRFT*RTRPLG
Trigger: ACCCAACGGCCTGGTCCGCAAGGTGAAGCGGACACT...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGAGTCAGTCAAGATCTGGGAATCATAGGGCACAGCCAGGATCCCTTGGCTTCTGGTGCTTGCTGCGCTTaGAGGAGATGGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RVSQDLGIIGHSQDPLASGACCA*RRWQLG
Trigger: CCCCAGCTGCCATCTCCTCAAAGCGCAGCAAGCACC...AGAAGCCAAGGGATCCTGGCTGTGCCCTATGATTCCCAGATCTTGACTGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp GCAAAGAAGCTTCGAGCCGTGCATGCTCCAGTGCCAGACAGGCGGCGACTCACCTCGATGGGTGAGAACTaGGAGATCTTTTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: AKKLRAVHAPVPDRRRLTSMGEN*EIFCSM
Trigger: CATGGAGCAAAAGATCTCCAAGTTCTCACCCATCGA...GGTGAGTCGCCGCCTGTCTGGCACTGGAGCATGCACGGCTCGAAGCTTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACCCTGCTGGGGCGCTTaGGCTGCGGGTGGTTTAGAG +
Preference number: 5 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEPCWGA*AAGGLE
Trigger: CTCTAAACCACCCGCAGCCAAAGCGCCCCAGCAGGG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGTCCAGGTCCTGGAGTaGTCTGCGCCTGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHVQVLE*SAPEEP
Trigger: GGGCTCCTCAGGCGCAGACAACTCCAGGACCTGGAC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GTTGTGACACTGGGTGCAGGTGTTGAAGTTTGGCTGGCTGGGGGTTaGTGTGAGGTCCGAGGTCTTGCATATTGGACACAGGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VVTLGAGVEVWLAGG*CEVRGLAYWTQGAA
Trigger: AGCAGCACCCTGTGTCCAATATGCAAGACCTCGGACCTCACATCAACCCCCAGCCAGCCAAACTTCAACACCTGCACCCAGTGTCACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp CCAAGTTGTCTTCCTCGGCACTCATTTCTAGGATCTGTCGCCGCATaGATTCTTCATCAGTCATGTCTGCCCGGGCTGGGGGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: PSCLPRHSFLGSVAA*ILHQSCLPGLGAEV
Trigger: CACCTCAGCCCCCAGCCCGGGCAGACATGACTGATGAAGAATTCATGCGGCGACAGATCCTAGAAATGAGTGCCGAGGAAGACAACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp ATCTCCGTATACCACTGGCTGCTTTTGCTGAGCCATGAGCACAGATaGGGCCATTGTGATGCTCACCGTGGTGGCAGTGGCCAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: ISVYHWLLLLSHEHR*GHCDAHRGGSGQEG
Trigger: ACCTTCCTGGCCACTGCCACCACGGTGAGCATCACAATGGCCTCATCTGTGCTCATGGCTCAGCAAAAGCAGCCAGTGGTATACGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS TCA 90 bp AGGCGGCTCTGGAAAGGATCTCCGTATACCACTGGCTGCTTTTGCTaGGCCATGAGCACAGATGAGGCCATTGTGATGCTCACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: RRLWKGSPYTTGCFC*AMSTDEAIVMLTVV
Trigger: CACCACGGTGAGCATCACAATGGCCTCATCTGTGCTCATGGCTCAGCAAAAGCAGCCAGTGGTATACGGAGATCCTTTCCAGAGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp AGGGTAGGTAGGTGCTGGGTATGTGCTAGGGCCAGTGTAGGTAGGTaGCTGGTGGGCTGGAAATCCATTTTGAGTTGGTCCACTACTGCC +
Preference number: 5 (lower is better)
Translates to: RVGRCWVCARASVGR*LVGWKSILSWSTTA
Trigger: GGCAGTAGTGGACCAACTCAAAATGGATTTCCAGCCCACCAGGCACCTACCTACACTGGCCCTAGCACATACCCAGCACCTACCTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp CTTAGAGGGATGCTTTGGCCCCATGGGTCCTGGACCGTACTTGTCTaGTCGAGCCCCGTGTCTATAGTCACTGTCACCGTAATAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LRGMLWPHGSWTVLV*SSPVSIVTVTVIVG
Trigger: ACCCACTATTACGGTGACAGTGACTATAGACACGGGGCTCGAGCAGACAAGTACGGTCCAGGACCCATGGGGCCAAAGCATCCCTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp ATGGGTGAGAACTTGGAGATCTTTTGCTCCATGCCTTGCTTCCGGTaGTTGCTGCGCTTTGAGGAGATGGCAGCTGGGGCCAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: MGENLEIFCSMPCFR*LLRFEEMAAGARLL
Trigger: TAAGAGCCTGGCCCCAGCTGCCATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTTCTCACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp CCTTTTGAAGTCGCTCTGCAGTGTCCCGTTCCCGTTCATACCCTTTaGCTCGGCTGCTATAGTCATGGCTGGACAGCTTCTCCCCACTGT +
Preference number: 5 (lower is better)
Translates to: PFEVALQCPVPVHTL*LGCYSHGWTASPHC
Trigger: ACAGTGGGGAGAAGCTGTCCAGCCATGACTATAGCAGCCGAGGCAAAGGGTATGAACGGGAACGGGACACTGCAGAGCGACTTCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp CACCCCACTTTTTGCTTTAGGAGTCCCAGGAGGCACAGTAGTCTCTaGAGGTGGCTTCGGCACAGGCTCAGCTTTAGCAGAGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: HPTFCFRSPRRHSSL*RWLRHRLSFSRGHC
Trigger: ACAGTGACCTCTGCTAAAGCTGAGCCTGTGCCGAAGCCACCTCCAGAGACTACTGTGCCTCCTGGGACTCCTAAAGCAAAAAGTGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TCTTGGGCATTGAGGTTGATAACCAAAGGCTGCACAGCGGTTGACTaGCGTCCTGAGACTGGATCCAGGGCCAGGCCATACTTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: SWALRLITKGCTAVD*RPETGSRARPYFLA
Trigger: AGCAAGGAAGTATGGCCTGGCCCTGGATCCAGTCTCAGGACGCCAGTCAACCGCTGTGCAGCCTTTGGTTATCAACCTCAATGCCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CAGCAGGCTTCCCCAAATAGACAGGTCCTTCAGCAGGTGGAACGCTaGAAGCAATGGGGAATCTTGGTGCAGGATAGCGGTATAGCCCTG +
Preference number: 5 (lower is better)
Translates to: QQASPNRQVLQQVER*KQWGILVQDSGIAL
Trigger: CAGGGCTATACCGCTATCCTGCACCAAGATTCCCCATTGCTTCCAGCGTTCCACCTGCTGAAGGACCTGTCTATTTGGGGAAGCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTCCGAGGTCTTGCATATaGGACACAGGGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRPRSCI*DTGCCW
Trigger: CCAGCAGCACCCTGTGTCCAATATGCAAGACCTCGG...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAACCGAGGAGATCGCTCTaGCTCTGGCTTCCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEPRRSL*LWLPQR
Trigger: CCTCTGGGGAAGCCAGAGCAAGAGCGATCTCCTCGG...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACATGTTGAGCTCGGCTaGGCACAGTGGGCAGGCGGA +
Preference number: 5 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAHVELG*AQWAGG
Trigger: TCCGCCTGCCCACTGTGCCAAGCCGAGCTCAACATG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCCAGCAGCCGCTTAGTTaGGCAGTTCAGACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLQQPLS*AVQTEP
Trigger: TGGCTCTGTCTGAACTGCCAAACTAAGCGGCTGCTG...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTTGGGGAAGGCGCCTCTaGGGTTCTTGGCTAGATTCC +
Preference number: 5 (lower is better)
Translates to: KPTECPYTCILCGLPSLSWGRRL*GSWLDS
Trigger: GGAATCTAGCCAAGAACCCAAGAGGCGCCTTCCCCA...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGCTCGAAGCTCTTCCTaGTCACGCCGGGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHARSSS*SRRVLR
Trigger: CCGCAAGACCCGGCGTGACAAGGAAGAGCTTCGAGC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATTACTGGGTGGTGTCTaGGAGCGTTCACGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAELLGGV*ERSRRR
Trigger: GCGGCGGCGTGAACGCTCCAAGACACCACCCAGTAA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCATGCACTTGGAGGTGTaGTCTGGCTGTAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLMHLEV*SGCSCG
Trigger: CCCACAGCTACAGCCAGACAACACCTCCAAGTGCAT...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGGCAGTGGCATCGTGCTaGCTGTCAGAGCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWAVASC*LSEPES
Trigger: AGACTCAGGCTCTGACAGCAAGCACGATGCCACTGC...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGAGGGAGAATCTCTCTTaGGCAGACTCCTCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWRENLS*ADSSAV
Trigger: CACCGCCGAGGAGTCTGCCAAAGAGAGATTCTCCCT...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTATGCTTCTTGCGCAGCTaGGTGGACTCATGCTCCACC +
Preference number: 5 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLCFLRS*VDSCST
Trigger: GGTGGAGCATGAGTCCACCAAGCTGCGCAAGAAGCA...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CCTGGGTTTGTGCTCTTGGTGGCCTGCTGCCCGCTATTGCTTCTAAATCAACGTTGCTTCTTGCGCAGCTaGGTGGACTCATGCTCCACC +
Preference number: 5 (lower is better)
Translates to: PGFVLLVACCPLLLLNQRCFLRS*VDSCST
Trigger: GGTGGAGCATGAGTCCACCAAGCTGCGCAAGAAGCA...ACGTTGATTTAGAAGCAATAGCGGGCAGCAGGCCACCAAGAGCACAAACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CAGTTCTGGCAGGTCTTTACTAGCGTGTCCCAAAGTCAGGGAGAAGCGCTCCTAAACTCCGCCTGCTTCTaGCGCAGCTTGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: QFWQVFTSVSQSQGEALLNSACF*RSLVDS
Trigger: TGAGTCCACCAAGCTGCGCAAGAAGCAGGCGGAGTT...TAGGAGCGCTTCTCCCTGACTTTGGGACACGCTAGTAAAGACCTGCCAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCTGGAGCCGCAGCTGGTaGAGCTCGCTGTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGWSRSW*SSLSDR
Trigger: CCTGTCTGACAGCGAGCTCAACCAGCTGCGGCTCCA...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATGGAGCCGCAGCTGGTaGAGCTCGCTGTCAGACAGG +
Preference number: 5 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEWSRSW*SSLSDR
Trigger: CCTGTCTGACAGCGAGCTCAACCAGCTGCGGCTCCA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCATGGTTGGCATGGGCGTaGGGGCTGCGTAATGGCCTG +
Preference number: 5 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAWLAWA*GLRNGL
Trigger: CAGGCCATTACGCAGCCCCAACGCCCATGCCAACCA...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGGTGCTTGCTGCGCTTaGAGGAGATGGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHGACCA*RRWQLG
Trigger: CCCCAGCTGCCATCTCCTCAAAGCGCAGCAAGCACC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGCCTTGCTTCCGGTGCTaGCTGCGCTTTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWPCFRC*LRFEEM
Trigger: CATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGG...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAAGCCCGCGGTCCGTCCTaGACATGTTCCTGGACGTCA +
Preference number: 5 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAEARGPS*TCSWTS
Trigger: TGACGTCCAGGAACATGTCAAGGACGGACCGCGGGC...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp AATCACCTCGTAATTGGTGGGAACTTTCTGCTCCAGATCAGCCAGTaGAGTCTGCCGTGGCTTCTGGTGGGCAGCACGACTGTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: NHLVIGGNFLLQISQ*SLPWLLVGSTTVSL
Trigger: CAAGCTGACAGTCGTGCTGCCCACCAGAAGCCACGGCAGACTTCACTGGCTGATCTGGAGCAGAAAGTTCCCACCAATTACGAGGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp GCTGGCTCTCCGAGGCAGTGGGGGTGCTGTCCTTCGTCAGTTCGCTaGTGTCGTCGATCATCACATAGTTTCGAGGAACATTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: AGSPRQWGCCPSSVR*CRRSSHSFEEHSVP
Trigger: TGGAACAGAATGTTCCTCGAAACTATGTGATGATCGACGACATCAGCGAACTGACGAAGGACAGCACCCCCACTGCCTCGGAGAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS TCA 90 bp ATAGGAGGCCAGGTCGGATTCCACATCCTTGGCCTCCTCGATGGGTaGGAACTTGGAGATCTTTTGCTCCATGCCTTGCTTCCGGTGCTT +
Preference number: 5 (lower is better)
Translates to: IGGQVGFHILGLLDG*ELGDLLLHALLPVL
Trigger: AAGCACCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTTCTCACCCATCGAGGAGGCCAAGGATGTGGAATCCGACCTGGCCTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS GCA 90 bp ATTGTGATGCTCACCGTGGTGGCAGTGGCCAGGAAGGTATGGGTCTaGTCTTGGGCATTGAGGTTGATAACCAAAGGCTGCACAGCGGTT +
Preference number: 5 (lower is better)
Translates to: IVMLTVVAVARKVWV*SWALRLITKGCTAV
Trigger: AACCGCTGTGCAGCCTTTGGTTATCAACCTCAATGCCCAAGAGCAGACCCATACCTTCCTGGCCACTGCCACCACGGTGAGCATCACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS GCA 90 bp TCCACATCCTTGGCCTCCTCGATGGGTGAGAACTTGGAGATCTTTTaGTCCATGCCTTGCTTCCGGTGCTTGCTGCGCTTTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: STSLASSMGENLEIF*SMPCFRCLLRFEEM
Trigger: CATCTCCTCAAAGCGCAGCAAGCACCGGAAGCAAGGCATGGAGCAAAAGATCTCCAAGTTCTCACCCATCGAGGAGGCCAAGGATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp TCCCCAAATAGACAGGTCCTTCAGCAGGTGGAACGCTGGAAGCAATaGGGAATCTTGGTGCAGGATAGCGGTATAGCCCTGCTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: SPNRQVLQQVERWKQ*GILVQDSGIALLVQ
Trigger: TTGGACCAGCAGGGCTATACCGCTATCCTGCACCAAGATTCCCCATTGCTTCCAGCGTTCCACCTGCTGAAGGACCTGTCTATTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp TGCTGGGTATGTGCTAGGGCCAGTGTAGGTAGGTGCCTGGTGGGCTaGAAATCCATTTTGAGTTGGTCCACTACTGCCTGCAGTGTACTG +
Preference number: 5 (lower is better)
Translates to: CWVCARASVGRCLVG*KSILSWSTTACSVL
Trigger: CAGTACACTGCAGGCAGTAGTGGACCAACTCAAAATGGATTTCCAGCCCACCAGGCACCTACCTACACTGGCCCTAGCACATACCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp TGTCGTCGATCATCACATAGTTTCGAGGAACATTCTGTTCCAGACTaGTGTAGTGGGAGTCAGAGGGATACGTGGGGGCTGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: CRRSSHSFEEHSVPD*CSGSQRDTWGLGSG
Trigger: GCCAGAGCCCAGCCCCCACGTATCCCTCTGACTCCCACTACACCAGTCTGGAACAGAATGTTCCTCGAAACTATGTGATGATCGACGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACTGTGGTGGCACTTTaGCCCTGGGCCTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGTVVAL*PWASPA
Trigger: TGCAGGAGAGGCCCAGGGCAAAAGTGCCACCACAGT...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp AGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCACGCTTCTGGAACAGGCTaGACAACTGGGGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RRLLQSYSQKGKDLSCGHASGTG*TTGVAG
Trigger: CCCTGCCACCCCAGTTGTCAAGCCTGTTCCAGAAGC...GTGCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCACAAGGTTTCCAGGGCTaGGCTGCCCTTCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGAQGFQG*AALLGR
Trigger: CCTACCCAGAAGGGCAGCCAAGCCCTGGAAACCTTG...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGAAACTCCGCCTGCTTCTaGCGCAGCTTGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGNSACF*RSLVDS
Trigger: TGAGTCCACCAAGCTGCGCAAGAAGCAGGCGGAGTT...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATTTGCGGACCAGGCCGTaGGGTGGCAGCGCCGACACA +
Preference number: 5 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDLRTRP*GGSADT
Trigger: TGTGTCGGCGCTGCCACCCAACGGCCTGGTCCGCAA...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124763.2
CDS TCA 90 bp TGGCGAAGGGTGCTGTCAGCTATGAATTGCTTCTGGGGACTCACATaGGCCTTGTTCAGCCTCTCACTGGAAGCAAACGAAGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: WRRVLSAMNCFWGLT*ALFSLSLEANEVSR
Trigger: CCTGGACACTTCGTTTGCTTCCAGTGAGAGGCTGAACAAGGCTCATGTGAGTCCCCAGAAGCAATTCATAGCTGACAGCACCCTTCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CTTACACATACAGTATCTCATGACTTCTATGGCTCTCCAGTGCCACCCGGTGCATTGGGGTTGGAGAAGTaGTTCTCTGGCTGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LTHTVSHDFYGSPVPPGALGLEK*FSGCPG
Trigger: CCCTGGGCAGCCAGAGAACAACTTCTCCAACCCCAA...TGCACCGGGTGGCACTGGAGAGCCATAGAAGTCATGAGATACTGTATGTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATATGGGCCTTGGGCCCTaGTCTCTCGGGGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDMGLGP*SLGGSL
Trigger: GAGAGAGCCCCCGAGAGACAAGGGCCCAAGGCCCAT...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCGTGAGGTCCGAGGTCTaGCATATTGGACACAGGGTG +
Preference number: 5 (lower is better)
Translates to: LSKAGSLERHERSPKPMVVRSEV*HIGHRV
Trigger: CACCCTGTGTCCAATATGCAAGACCTCGGACCTCAC...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTACCACTGGCTGCTTTaGCTGAGCCATGAGCACAGA +
Preference number: 5 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWYHWLL*LSHEHR
Trigger: TCTGTGCTCATGGCTCAGCAAAAGCAGCCAGTGGTA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CAGAGAGTTTCATTTGATTATATATGTCCCTCCGGCCCTGATGGAGTCCATGATCGGCTGCGCGCACTGTaGCTGTGGACGGGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: QRVSFDYICPSGPDGVHDRLRAL*LWTGVA
Trigger: AGCTACTCCCGTCCACAGCAACAGTGCGCGCAGCCG...ATCATGGACTCCATCAGGGCCGGAGGGACATATATAATCAAATGAAACTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTCCAGGTACTTGAGCTaGGCGTCAATCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSRYLS*ASISFS
Trigger: GGAGAAGGAGATTGACGCCAAGCTCAAGTACCTGGA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCCCCAGTTCCAGGTACTaGAGCTTGGCGTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: LSKAGSLERHERSPKPMVPSSRY*SLASIS
Trigger: GGAGATTGACGCCAAGCTCAAGTACCTGGAACTGGG...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp CTAGAAGACTCCTGCAGTCATATTCACAGAAGGGCAAAGATCTGTCCTGTGGGCTGTCAGCTTTCCAGCTaGTTCTGCTGCCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: LEDSCSHIHRRAKICPVGCQLSS*FCCPTR
Trigger: CCTGGTGGGGCAGCAGAACAAGCTGGAAAGCTGACA...GCCCACAGGACAGATCTTTGCCCTTCTGTGAATATGACTGCAGGAGTCTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS CCA 90 bp ACTTTTTGCTTTAGGAGTCCCAGGAGGCACAGTAGTCTCTGGAGGTaGCTTCGGCACAGGCTCAGCTTTAGCAGAGGTCACTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: TFCFRSPRRHSSLWR*LRHRLSFSRGHCLL
Trigger: AAGAAGACAGTGACCTCTGCTAAAGCTGAGCCTGTGCCGAAGCCACCTCCAGAGACTACTGTGCCTCCTGGGACTCCTAAAGCAAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS CCA 90 bp CCCATCTGGGTGATCAGAATGTCCCTTCTGGCCAGAGGTGTTACTTaGTTGGGAAGGTTATACCTGGCAAACTTAGCCTCCCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: PIWVIRMSLLARGVT*LGRLYLANLASLGL
Trigger: AAGACCCAGGGAGGCTAAGTTTGCCAGGTATAACCTTCCCAACCAAGTAACACCTCTGGCCAGAAGGGACATTCTGATCACCCAGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp AAACCCACAGAATGTCCATACACATGCATCCTGTGCGGGCTCCCCTCTCTGTCTATGCTTGCTTTGGGGTaGGAGAAGTTGTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: KPTECPYTCILCGLPSLSMLALG*EKLFSG
Trigger: GCCAGAGAACAACTTCTCCAACCCCAAAGCAAGCAT...AGACAGAGAGGGGAGCCCGCACAGGATGCATGTGTATGGACATTCTGTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCGGGGTTGAACCCACATaGGTTGCAGACCTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: LSKAGSLERHERSPKPMVGVEPT*VADLVV
Trigger: CACAACAAGGTCTGCAACCAATGTGGGTTCAACCCC...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp TTCAGTGTGGGCCCTGAGACTGTTCACCCTGCCCAAAGAACAGGAAGAAGATGGTCGTCTTCCTCCAAGTaGTCTTCCTCGGCACTCATT +
Preference number: 5 (lower is better)
Translates to: FSVGPETVHPAQRTGRRWSSSSK*SSSALI
Trigger: AATGAGTGCCGAGGAAGACAACTTGGAGGAAGACGA...CCATCTTCTTCCTGTTCTTTGGGCAGGGTGAACAGTCTCAGGGCCCACACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp GGACGGTGTTATACTCCCCTTACCTCACAGGTCTCTGAAGCTCTCCCTTGGCTCTGCTTCTCCTTCTTTTaGTCCTCAGTGAAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: GRCYTPLTSQVSEALPWLCFSFF*SSVKPR
Trigger: TCTGGGCTTCACTGAGGACAAAAAGAAGGAGAAGCA...GAGCCAAGGGAGAGCTTCAGAGACCTGTGAGGTAAGGGGAGTATAACACCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CCACTCTCTAGGGTACCACACTTGAGAGGAATTGATTTGACCCCAGAGGCTGAATCTGACTGCTGTTGCTaGGCTTGCTGCAGGCCCATA +
Preference number: 5 (lower is better)
Translates to: PLSRVPHLRGIDLTPEAESDCCC*ACCRPI
Trigger: TATGGGCCTGCAGCAAGCCAAGCAACAGCAGTCAGA...TTCAGCCTCTGGGGTCAAATCAATTCCTCTCAAGTGTGGTACCCTAGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035208.14
CDS-3UTR CAA 90 bp CTGAGTAAGGCAGGGTCTCTTGAAAGACATGAAAGGTCCCCCAAGCCAATGGTCTGGAGAGTAGAGCACTaGTGGAGACTTAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSKAGSLERHERSPKPMVWRVEH*WRLRRL
Trigger: CAGCCTCCTAAGTCTCCACAAGTGCTCTACTCTCCA...GACCATTGGCTTGGGGGACCTTTCATGTCTTTCAAGAGACCCTGCCTTACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATGGAGAGTAGAGCACTaGTGGAGACTTAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGWRVEH*WRLRRL
Trigger: CAGCCTCCTAAGTCTCCACAAGTGCTCTACTCTCCA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14
ENSMUST00000124763.2
CDS-3UTR CAA 90 bp AGTTCTCACAGAGCACAGGAGGACGGCACACAATTCACAAGGTCATGTGGAGGATCCAGGTACTTGAGCTaGGCGTCAATCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSHRAQEDGTQFTRSCGGSRYLS*ASISFS
Trigger: GGAGAAGGAGATTGACGCCAAGCTCAAGTACCTGGA...TCCTCCACATGACCTTGTGAATTGTGTGCCGTCCTCCTGTGCTCTGTGAGAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035208.14