Pregenerated sensors for BSG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023175Ensembl transcript IDs: ENSMUST00000067036.12, ENSMUST00000105381.5, ENSMUST00000178383.8, ENSMUST00000179781.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTAAGGTAAGGCTCTGTCTTCACTTGGGTTGGGATAGGTTGGGTTaGGTAGGTTCAAATCGGGACAGGATGGGATACTGGAGTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: CKVRLCLHLGWDRLG*VGSNRDRMGYWSGG Trigger: ACCTCCACTCCAGTATCCCATCCTGTCCCGATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACAGAGCCTTACCTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTCACCTCCCCTCCCCCGCCTaGCCCACCACTCAGGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: KWLASSRWVFCKVRLCLHLPSPA*PTTQVA Trigger: CGCCACCTGAGTGGTGGGGCAGGCGGGGGAGGGGAG...GTGAAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGCACTGGCCTTCCCTCCTGACCAAGGACAAGGCCCCATTCCCCCACTCCTTGCTTCTTCCAGGTaGGTTTTCTGTAAGGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: EHALAFPPDQGQGPIPPLLASSR*VFCKVR Trigger: CCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAG...GAGTGGGGGAATGGGGCCTTGTCCTTGGTCAGGAGGGAAGGCCAGTGCATGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGACAAGGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCATGGGATAGGTTGGGTTaGGTAGGTTCAAATCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PRTRPHSPTPQGCSDNTSWDRLG*VGSNRD Trigger: GTCCCGATTTGAACCTACCCAACCCAACCTATCCCA...TGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCCTTGTCCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGAAGGAATGGATTGTCTaGATAGAAACCTCATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: GPIPPLHRAVVTTLQKGRKEWIV*IETSFS Trigger: ACTAAATGAGGTTTCTATGCAGACAATCCATTCCTT...CCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| 3UTR-3UTR CCA 90 bp | GTAAGGCTCTGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATTGGGATAGGTTGGGTTaGGTAGGTTCAAATCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: VRLCLHLGWDRLGWVGSNWDRLG*VGSNRD Trigger: GTCCCGATTTGAACCTACCCAACCCAACCTATCCCA...ATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACAGAGCCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTTGGGATAGGTTGGGTTaGGTAGGTTCAAATCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: CKWLASSRWVFCKVRLCLWDRLG*VGSNRD Trigger: GTCCCGATTTGAACCTACCCAACCCAACCTATCCCA...AAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGAAACAGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGATTAGAAACAGGGGCTaGAAGTGGCTTGCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: IRNRGCKWLASSRWVFCKIRNRG*KWLASS Trigger: GGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAAT...CTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGAAGGAATGGATTGTCTaGATAGAAACCTCATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: RPHSPTPQGCSDNTSEGKKEWIV*IETSFS Trigger: ACTAAATGAGGTTTCTATGCAGACAATCCATTCCTT...CTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| 3UTR CCA 72 bp | CGGGACAGGATGGGATACTGGAGTGGAGGTAGACGCTaGCCTGGGGTCAGGCACCCTGGGCACCTCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: RDRMGYWSGGRR*PGVRHPGHLPS Trigger: GGAGGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCTGTCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| 3UTR CCA 72 bp | GCCCAGCCCCCTCCAACAGTAAGTCAGAGCATGCACTaGCCTTCCCTCCTGACCAAGGACAAGGCCCCATTC | + |
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Preference number: 3 (lower is better) Translates to: AQPPPTVSQSMH*PSLLTKDKAPF Trigger: GAATGGGGCCTTGTCCTTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGGGGCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| 3UTR CCA 72 bp | GGTTGGGTAGGTTCAAATCGGGACAGGATGGGATACTaGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GWVGSNRDRMGY*SGGRRWPGVRH Trigger: GTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCTGTCCCGATTTGAACCTACCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| 3UTR CCA 72 bp | AGGCTCTGTCTTCACTTGGGTTGGGATAGGTTGGGTTaGGTAGGTTCAAATCGGGACAGGATGGGATACTGG | + |
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Preference number: 3 (lower is better) Translates to: RLCLHLGWDRLG*VGSNRDRMGYW Trigger: CCAGTATCCCATCCTGTCCCGATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACAGAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | TACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTCCCCCCCGCCCACCGCTCCTaGGACAGTGGTGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: YWSGGRRWPGVRHPGHLPPAHRS*DSGALR Trigger: CCTCAAGGCACCACTGTCGCAGGAGCGGTGGGCGGG...GGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTA 69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS-3UTR TCA 90 bp | TGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCGCGACAGTGGTGCCTTaGGGAAACCAGCCGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: WDTGVEVDAGLGSGTLGTATVVP*GNQPPR Trigger: GCGCGGCGGCTGGTTTCCTCAAGGCACCACTGTCGC...GGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS-3UTR CCA 90 bp | TACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTCCCCTCCACTGCCCTTCAGTaGGGCGGCGCCAGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: YWSGGRRWPGVRHPGHLPSTALQ*GGARVI Trigger: GATGACCCTGGCGCCGCCCCACTGAAGGGCAGTGGA...GGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | TGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTGCGGTCTGGGTCACTaGTGGCCCGGCACTCGTAAG | + |
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Preference number: 4 (lower is better) Translates to: WDTGVEVDAGLGSGTLGTCGLGH*WPGTRK Trigger: CTTACGAGTGCCGGGCCAGCAGTGACCCAGACCGCA...GGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS-3UTR CCA 90 bp | TACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTCCCCCCGCTCCTGCGACAGTaGTGCCTTGAGGAAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: YWSGGRRWPGVRHPGHLPPLLRQ*CLEETS Trigger: GCTGGTTTCCTCAAGGCACCACTGTCGCAGGAGCGG...GGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTA 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS-3UTR CCA 90 bp | GAGCATGCACTGGCCTTCCCTCCTGACCAAGGACAAGGCCCCATTCCCCCACTCTCCACTGCCCTTCAGTaGGGCGGCGCCAGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: EHALAFPPDQGQGPIPPLSTALQ*GGARVI Trigger: GATGACCCTGGCGCCGCCCCACTGAAGGGCAGTGGA...GAGTGGGGGAATGGGGCCTTGTCCTTGGTCAGGAGGGAAGGCCAGTGCATGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | TACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTCCCCGCTGATGGTCAGCTGTaGCTTCTCAGGCGTGGATAC | + |
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Preference number: 4 (lower is better) Translates to: YWSGGRRWPGVRHPGHLPADGQL*LLRRGY Trigger: GTATCCACGCCTGAGAAGTCACAGCTGACCATCAGC...GGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | AGGATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGTCATGTGAGTTCCACTaGCCTTCAGTGGGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RMGYWSGGRRWPGVRHPGSCEFH*PSVGRR Trigger: GCGCCGCCCCACTGAAGGGCAGTGGAACTCACATGA...CCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | GGGACAGGATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCTCATGTGAGTTCCACTaGCCTTCAGTGGGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GTGWDTGVEVDAGLGSGTSCEFH*PSVGRR Trigger: GCGCCGCCCCACTGAAGGGCAGTGGAACTCACATGA...GGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | GGGACAGGATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCGTGGCCCTTCCACATTaGTCTCGCTTCTGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: GTGWDTGVEVDAGLGSGTVALPH*SRFCPQ Trigger: CTGTGGGCAGAAGCGAGATCAATGTGGAAGGGCCAC...GGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | ATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACGTGGCCCTTCCACATTaGTCTCGCTTCTGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: MGYWSGGRRWPGVRHPGHVALPH*SRFCPQ Trigger: CTGTGGGCAGAAGCGAGATCAATGTGGAAGGGCCAC...GTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | TACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTCCCCATTTCTTTCCGACCTTaGTCCTGGGTGGCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: YWSGGRRWPGVRHPGHLPISFRP*SWVALP Trigger: TGGAAGGGCCACCCAGGATCAAGGTCGGAAAGAAAT...GGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | GGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGGGACCTCAGCCACGATaGCTAGGAAGGGCCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GPIPPLHRAVVTTLQKGRGPQPR*LGRARG Trigger: CCCTCTGGCCCTTCCTAGGCATCGTGGCTGAGGTCC...CCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR CCA 90 bp | AGGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGTCCACTGCCCTTCAGTaGGGCGGCGCCAGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: RPHSPTPQGCSDNTSEGKSTALQ*GGARVI Trigger: GATGACCCTGGCGCCGCCCCACTGAAGGGCAGTGGA...CTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | AGGATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGATTTCTTTCCGACCTTaGTCCTGGGTGGCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RMGYWSGGRRWPGVRHPGISFRP*SWVALP Trigger: TGGAAGGGCCACCCAGGATCAAGGTCGGAAAGAAAT...CCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | AGGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGGACCTCAGCCACGATaGCTAGGAAGGGCCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RPHSPTPQGCSDNTSEGKGPQPR*LGRARG Trigger: CCCTCTGGCCCTTCCTAGGCATCGTGGCTGAGGTCC...CTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | AGGATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCTTCAGTGCTATTGGTaGTTGCCTCTTCTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RMGYWSGGRRWPGVRHPGLQCYW*LPLLPQ Trigger: CTGGGGAAGAAGAGGCAATCACCAATAGCACTGAAG...CCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | CCAGCCCCCTCCAACAGTAAGTCAGAGCATGCACTGGCCTTCCCTCCTGACCAAGGCAGAGTGTCCTCCTaGAGTACCTTGCCACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PAPSNSKSEHALAFPPDQGRVSS*STLPPL Trigger: GAGAGGTGGCAAGGTACTGCAGGAGGACACTCTGCC...TTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGGGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR CCA 90 bp | GGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGCCTTCAAACCACCACTaGATCTCGGGGATGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GPIPPLHRAVVTTLQKGRPSNHH*ISGMGL Trigger: CAGCCCCATCCCCGAGATCCAGTGGTGGTTTGAAGG...CCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS-3UTR TCA 90 bp | ACAAGGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGGTGGCCCTTCCACATTaGTCTCGCTTCTGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: TRPHSPTPQGCSDNTSEGVALPH*SRFCPQ Trigger: CTGTGGGCAGAAGCGAGATCAATGTGGAAGGGCCAC...CCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCCTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCCTCCAACAGTAAGTCAGAGCATGCACTGGCCTTCCCTCCTGACCAAGCTGATGGTCAGCTGTaGCTTCTCAGGCGTGGATAC | + |
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Preference number: 4 (lower is better) Translates to: PAPSNSKSEHALAFPPDQADGQL*LLRRGY Trigger: GTATCCACGCCTGAGAAGTCACAGCTGACCATCAGC...TTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGGGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | TACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTCCCCATACCACCACATACTTaGCATTGGCTTCAGTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: YWSGGRRWPGVRHPGHLPIPPHT*HWLQCY Trigger: ATAGCACTGAAGCCAATGGCAAGTATGTGGTGGTAT...GGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR CCA 90 bp | GGGACAGGATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCTTGGAGTTGACTTCCTaGACAGAGGTTTGGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: GTGWDTGVEVDAGLGSGTLELTS*TEVWMV Trigger: CACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAA...GGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR CCA 90 bp | TGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCCAAGCTCTCCCTCACTaGAATGCTCTGATTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: WDTGVEVDAGLGSGTLGTQALPH*NALISF Trigger: GAAAGAAATCAGAGCATTCCAGTGAGGGAGAGCTTG...GGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR CCA 90 bp | TGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATCGGGACAGGAAGGTGGTTGCGGTCTaGGTCACTGCTGGCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: CLHLGWDRLGWVGSNRDRKVVAV*VTAGPA Trigger: TGCCGGGCCAGCAGTGACCCAGACCGCAACCACCTT...CCTGTCCCGATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS-3UTR CCA 90 bp | GGGACAGGATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCAAGCTCTCCCTCACTaGAATGCTCTGATTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GTGWDTGVEVDAGLGSGTQALPH*NALISF Trigger: GAAAGAAATCAGAGCATTCCAGTGAGGGAGAGCTTG...GGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCATCCTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCGTGGCCCTTCCACATTaGTCTCGCTTCTGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: RGCKWLASSRWVFCKVRLVALPH*SRFCPQ Trigger: CTGTGGGCAGAAGCGAGATCAATGTGGAAGGGCCAC...GAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | ACAAGGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGATTTCTTTCCGACCTTaGTCCTGGGTGGCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TRPHSPTPQGCSDNTSEGISFRP*SWVALP Trigger: TGGAAGGGCCACCCAGGATCAAGGTCGGAAAGAAAT...CCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | CCCCCTCCAACAGTAAGTCAGAGCATGCACTGGCCTTCCCTCCTGACCAAGGACCTTCAGTGCTATTGGTaGTTGCCTCTTCTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPTVSQSMHWPSLLTKDLQCYW*LPLLPQ Trigger: CTGGGGAAGAAGAGGCAATCACCAATAGCACTGAAG...GTCCTTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGGCTCAGGAAGGAAGATaGAGGAATATTCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPIPPLHRAVVTTLQKGRAQEGR*RNIPQS Trigger: GCTCTGGGGAATATTCCTGCATCTTCCTTCCTGAGC...CCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTACCACCACGCTCGCCTaGGCACGGACCCACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CKWLASSRWVFCKVRLCLTTTLA*ARTHLT Trigger: GGTCAAGTGGGTCCGTGCCCAGGCGAGCGTGGTGGT...AAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCCCTCCAACAGTAAGTCAGAGCATGCACTGGCCTTCCCTCCTGACCAATCCTTGTCATTCATGTaGGTTCCACTGCCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAPSNSKSEHALAFPPDQSLSFM*VPLPFS Trigger: ACTGAAGGGCAGTGGAACTCACATGAATGACAAGGA...TTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGGGGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGAAACAGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGTCTCGGGGATGGGGCTaGCCACAGCCTCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRNRGCKWLASSRWVFCKSRGWG*PQPHSA Trigger: TGCACTGTGAGGCTGTGGGCAGCCCCATCCCCGAGA...CTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
||
| CDS-3UTR GCA 90 bp | GAGCATGCACTGGCCTTCCCTCCTGACCAAGGACAAGGCCCCATTCCCCCACTCATACCACCACATACTTaGCATTGGCTTCAGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: EHALAFPPDQGQGPIPPLIPPHT*HWLQCY Trigger: ATAGCACTGAAGCCAATGGCAAGTATGTGGTGGTAT...GAGTGGGGGAATGGGGCCTTGTCCTTGGTCAGGAGGGAAGGCCAGTGCATGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTGGACCTCAGCCACGATaGCTAGGAAGGGCCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKWLASSRWVFCKVRLCLGPQPR*LGRARG Trigger: CCCTCTGGCCCTTCCTAGGCATCGTGGCTGAGGTCC...AAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCTCTGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATACTGGATCTCGGGGATaGGGCTGCCCACAGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRLCLHLGWDRLGWVGSNTGSRG*GCPQPH Trigger: GTGAGGCTGTGGGCAGCCCCATCCCCGAGATCCAGT...ATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACAGAGCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGGGAGCAGCTGTCGTTTaGAGCATTCCCTTCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: TRPHSPTPQGCSDNTSEGGAAVV*SIPFKP Trigger: TGGTTTGAAGGGAATGCTCCAAACGACAGCTGCTCC...CCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCCTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCCTCCAACAGTAAGTCAGAGCATGCACTGGCCTTCCCTCCTGACCAATTGGAGTTGACTTCCTaGACAGAGGTTTGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAPSNSKSEHALAFPPDQLELTS*TEVWMV Trigger: CACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAA...TTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGGGGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179781.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCACCACTCAGGTGGCGTTCCTCTGGCGTACATTCTTGTCCTTGTCATTGCTCAGGAAGGAAGATaGAGGAATATTCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPHHSGGVPLAYILVLVIAQEGR*RNIPQS Trigger: GCTCTGGGGAATATTCCTGCATCTTCCTTCCTGAGC...AATGACAAGGACAAGAATGTACGCCAGAGGAACGCCACCTGAGTGGTGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCCACCACTCAGGTGGCGTTCCTCTGGCGTACATTCTTGTCCTTGTCATTTGGAGTTGACTTCCTaGACAGAGGTTTGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAPPLRWRSSGVHSCPCHLELTS*TEVWMV Trigger: CACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAA...ATGACAAGGACAAGAATGTACGCCAGAGGAACGCCACCTGAGTGGTGGGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCCTTCAGTGCTATTGGTaGTTGCCTCTTCTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGCKWLASSRWVFCKVRLLQCYW*LPLLPQ Trigger: CTGGGGAAGAAGAGGCAATCACCAATAGCACTGAAG...GAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | TGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTGGCAGAGTGTCCTCCTaGAGTACCTTGCCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CKWLASSRWVFCKVRLCLGRVSS*STLPPL Trigger: GAGAGGTGGCAAGGTACTGCAGGAGGACACTCTGCC...AAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGATACCACCACATACTTaGCATTGGCTTCAGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GPIPPLHRAVVTTLQKGRIPPHT*HWLQCY Trigger: ATAGCACTGAAGCCAATGGCAAGTATGTGGTGGTAT...CCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS-3UTR CCA 90 bp | AAATTAGAAACAGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTACCACTTGACCCTGGGTaGCCGAGTAAGGTGGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLETGAASGLLLPGGFSVPLDPG*PSKVVA Trigger: CGCAACCACCTTACTCGGCCACCCAGGGTCAAGTGG...TACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATCGGGACAGGCTTCAGTGCTATTGGTaGTTGCCTCTTCTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLHLGWDRLGWVGSNRDRLQCYW*LPLLPQ Trigger: CTGGGGAAGAAGAGGCAATCACCAATAGCACTGAAG...CCTGTCCCGATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | TGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATCGGGACAGGGCTCAGGAAGGAAGATaGAGGAATATTCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLHLGWDRLGWVGSNRDRAQEGR*RNIPQS Trigger: GCTCTGGGGAATATTCCTGCATCTTCCTTCCTGAGC...CCTGTCCCGATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGGCTCTGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATATTTCTTTCCGACCTTaGTCCTGGGTGGCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRLCLHLGWDRLGWVGSNISFRP*SWVALP Trigger: TGGAAGGGCCACCCAGGATCAAGGTCGGAAAGAAAT...ATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACAGAGCCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | AAATTAGAAACAGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAGCTGATGGTCAGCTGTaGCTTCTCAGGCGTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: KLETGAASGLLLPGGFSVADGQL*LLRRGY Trigger: GTATCCACGCCTGAGAAGTCACAGCTGACCATCAGC...TACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR GCA 90 bp | TGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTGCTCAGGAAGGAAGATaGAGGAATATTCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKWLASSRWVFCKVRLCLAQEGR*RNIPQS Trigger: GCTCTGGGGAATATTCCTGCATCTTCCTTCCTGAGC...AAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | GTAAGGCTCTGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATTCCTTGTCATTCATGTaGGTTCCACTGCCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRLCLHLGWDRLGWVGSNSLSFM*VPLPFS Trigger: ACTGAAGGGCAGTGGAACTCACATGAATGACAAGGA...ATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACAGAGCCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR TCA 90 bp | AAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTCACTCCTTGTCATTCATGTaGGTTCCACTGCCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWLASSRWVFCKVRLCLHSLSFM*VPLPFS Trigger: ACTGAAGGGCAGTGGAACTCACATGAATGACAAGGA...GTGAAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR CCA 90 bp | TGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGTAAGGCTCTGTCTTCAAGCTCTCCCTCACTaGAATGCTCTGATTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKWLASSRWVFCKVRLCLQALPH*NALISF Trigger: GAAAGAAATCAGAGCATTCCAGTGAGGGAGAGCTTG...AAGACAGAGCCTTACCTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR CCA 90 bp | ATTAGAAACAGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGCAAGCTCTCCCTCACTaGAATGCTCTGATTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRNRGCKWLASSRWVFCKQALPH*NALISF Trigger: GAAAGAAATCAGAGCATTCCAGTGAGGGAGAGCTTG...CTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CCA 90 bp | TCCTGGACAGAGGTTTGGATGGTGCCCGCCGCCGCGCAGGCGCCTTaGCCGCTCAAGAGCGTGAAGGCCAGCGCCAGCAGCAGCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SWTEVWMVPAAAQAP*PLKSVKASASSSAA Trigger: GGCGGCGCTGCTGCTGGCGCTGGCCTTCACGCTCTTGAGCGGCCAAGGCGCCTGCGCGGCGGCGGGCACCATCCAAACCTCTGTCCAGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179781.8 |
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| CDS CCA 90 bp | TGCGACAGTGGTGCCTTGAGGAAACCAGCCGCCGCGCAGGCGCCTTaGCCGCTCAAGAGCGTGAAGGCCAGCGCCAGCAGCAGCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CDSGALRKPAAAQAP*PLKSVKASASSSAA Trigger: GGCGGCGCTGCTGCTGGCGCTGGCCTTCACGCTCTTGAGCGGCCAAGGCGCCTGCGCGGCGGCTGGTTTCCTCAAGGCACCACTGTCGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 90 bp | AAGGACCACCACGCTCGCCTGGGCACGGACCCACTTGACCCTGGGTaGCCGAGTAAGGTGGTTGCGGTCTGGGTCACTGCTGGCCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KDHHARLGTDPLDPG*PSKVVAVWVTAGPA Trigger: TGCCGGGCCAGCAGTGACCCAGACCGCAACCACCTTACTCGGCCACCCAGGGTCAAGTGGGTCCGTGCCCAGGCGAGCGTGGTGGTCCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 90 bp | ACAGAGGTTTGGATGGTGCCCGGTTCAAGGACCACCACGCTCGCCTaGGCACGGACCCACTTGACCCTGGGTGGCCGAGTAAGGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEVWMVPGSRTTTLA*ARTHLTLGGRVRWL Trigger: CAACCACCTTACTCGGCCACCCAGGGTCAAGTGGGTCCGTGCCCAGGCGAGCGTGGTGGTCCTTGAACCGGGCACCATCCAAACCTCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS GCA 90 bp | GCCTGTGTCCTCTGCGGTGAGCCCATCAACAGAGAGCGAACTGGCTaGATGCTGACGGTAGGCGGCATGGATGTGAACACGGTCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ACVLCGEPINRERTG*MLTVGGMDVNTVQP Trigger: CGGCTGGACCGTGTTCACATCCATGCCGCCTACCGTCAGCATGCAGCCAGTTCGCTCTCTGTTGATGGGCTCACCGCAGAGGACACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
||
| CDS CCA 90 bp | ACGGTCCAGCCGGGCACCATCCCAGAGCTGGGAGCAGCTGTCGTTTaGAGCATTCCCTTCAAACCACCACTGGATCTCGGGGATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVQPGTIPELGAAVV*SIPFKPPLDLGDGA Trigger: AGCCCCATCCCCGAGATCCAGTGGTGGTTTGAAGGGAATGCTCCAAACGACAGCTGCTCCCAGCTCTGGGATGGTGCCCGGCTGGACCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 90 bp | AGCTGGGAGCAGCTGTCGTTTGGAGCATTCCCTTCAAACCACCACTaGATCTCGGGGATGGGGCTGCCCACAGCCTCACAGTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SWEQLSFGAFPSNHH*ISGMGLPTASQCRT Trigger: GGTCCTGCACTGTGAGGCTGTGGGCAGCCCCATCCCCGAGATCCAGTGGTGGTTTGAAGGGAATGCTCCAAACGACAGCTGCTCCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
||
| CDS-3UTR CAA 90 bp | TACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCTCCCCTTGGCTTCAGTGCTATaGGTGATTGCCTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YWSGGRRWPGVRHPGHLPLASVL*VIASSS Trigger: GGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAA...GGGGAGGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR CAA 90 bp | TGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCACCACATACTTGCCATaGGCTTCAGTGCTATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WDTGVEVDAGLGSGTLGTTTYLP*ASVLLV Trigger: CACCAATAGCACTGAAGCCAATGGCAAGTATGTGGT...GGTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGATACTGGAGTGGAGGTAGACGCTGGCCTGGGGTCAGGCACCCTGGGCACCAGGTAAGCTGTGTTTaGGAGTTGACTTCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MGYWSGGRRWPGVRHPGHQVSCV*ELTSWT Trigger: TGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTG...GTGCCCAGGGTGCCTGACCCCAGGCCAGCGTCTACCTCCACTCCAGTATCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000178383.8 ENSMUST00000179781.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCGCCTGCCCCACCACTCAGGTGGCGTTCCTCTGGCGTACATTCTTGTCCTACCACATACTTGCCATaGGCTTCAGTGCTATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPPAPPLRWRSSGVHSCPTTYLP*ASVLLV Trigger: CACCAATAGCACTGAAGCCAATGGCAAGTATGTGGT...AGGACAAGAATGTACGCCAGAGGAACGCCACCTGAGTGGTGGGGCAGGCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
||
| CDS CCA 90 bp | CTTCAGTGGGGCGGCGCCAGGGTCATCCTCGTCCAGGGTCTGGTCTaGCTTCCGCCTCTTCTCATAGATAAAGATGATGGTAACCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LQWGGARVILVQGLV*LPPLLIDKDDGNQH Trigger: GTGTTGGTTACCATCATCTTTATCTATGAGAAGAGGCGGAAGCCAGACCAGACCCTGGACGAGGATGACCCTGGCGCCGCCCCACTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS TCA 90 bp | CCAGGACCTCAGCCACGATGCGTCAAGGTTGCTGATGGTCAGCTGTaGCTTCTCAGGCGTGGATACCACCACATACTTGCCATTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGPQPRCVKVADGQL*LLRRGYHHILAIGF Trigger: GAAGCCAATGGCAAGTATGTGGTGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGCATCGTGGCTGAGGTCCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGCAGGTAAGCTGTGTTTaGGAGTTGACTTCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GPIPPLHRAVVTTLQKGRQVSCV*ELTSWT Trigger: TGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTG...CCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067036.12 ENSMUST00000179781.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGACCACATACTTGCCATaGGCTTCAGTGCTATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPIPPLHRAVVTTLQKGRTTYLP*ASVLLV Trigger: CACCAATAGCACTGAAGCCAATGGCAAGTATGTGGT...CCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS TCA 90 bp | ATGGTAACCAACACCAGGACCTCAGCCACGATGCGTCAAGGTTGCTaGTGGTCAGCTGTGACTTCTCAGGCGTGGATACCACCACATACT | + |
|
Preference number: 5 (lower is better) Translates to: MVTNTRTSATMRQGC*WSAVTSQAWIPPHT Trigger: AGTATGTGGTGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGCATCGTGGCTGAGGTCCTGGTGTTGGTTACCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
||
| CDS TCA 90 bp | GGTGCCAGGGTCAACATTTACGTCAAGGTTGCTGATGGTCAGCTGTaGCTTCTCAGGCGTGGATACCACCACATACTTGCCATTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GARVNIYVKVADGQL*LLRRGYHHILAIGF Trigger: GAAGCCAATGGCAAGTATGTGGTGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGTAAATGTTGACCCTGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCAACAGTAAGTCAGAGCATGCACTGGCCTTCCCTCCTGACCAAGGACAAAGCTGTGTTTTGGAGTaGACTTCCTGGACAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSNSKSEHALAFPPDQGQSCVLE*TSWTEV Trigger: AACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCT...TTGTCCTTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179781.8 |
||
| CDS-3UTR CAA 90 bp | CCCCATTCCCCCACTCCACAGGGCTGTAGTGACAACACTTCAGAAGGGAAGGAATTGGCTTCAGTGCTATaGGTGATTGCCTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHSPTPQGCSDNTSEGKELASVL*VIASSS Trigger: GGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAA...TTCCTTCCCTTCTGAAGTGTTGTCACTACAGCCCTGTGGAGTGGGGGAATGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR CAA 90 bp | CCCTCCAACAGTAAGTCAGAGCATGCACTGGCCTTCCCTCCTGACCAAGGACAAACCACATACTTGCCATaGGCTTCAGTGCTATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PSNSKSEHALAFPPDQGQTTYLP*ASVLLV Trigger: CACCAATAGCACTGAAGCCAATGGCAAGTATGTGGT...TTGTCCTTGGTCAGGAGGGAAGGCCAGTGCATGCTCTGACTTACTGTTGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS-3UTR CAA 90 bp | ATTAGAAACAGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGGGGAGCAGCTGTCGTTaGGAGCATTCCCTTCAAACC | + |
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Preference number: 5 (lower is better) Translates to: IRNRGCKWLASSRWVFCKGSSCR*EHSLQT Trigger: GGTTTGAAGGGAATGCTCCAAACGACAGCTGCTCCC...CTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS-3UTR CAA 90 bp | TGTCTTCACTTGGGTTGGGATAGGTTGGGTTGGGTAGGTTCAAATCGGGACAGGAGCTGTGTTTTGGAGTaGACTTCCTGGACAGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: CLHLGWDRLGWVGSNRDRSCVLE*TSWTEV Trigger: AACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCT...CCTGTCCCGATTTGAACCTACCCAACCCAACCTATCCCAACCCAAGTGAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS GCA 90 bp | GGATACCACCACATACTTGCCATTGGCTTCAGTGCTATTGGTGATTaGCTCTTCTTCCCCAGTGTCAGAGGTCTTAAACCAGAACCAATC | + |
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Preference number: 5 (lower is better) Translates to: GYHHILAIGFSAIGD*LFFPSVRGLKPEPI Trigger: GATTGGTTCTGGTTTAAGACCTCTGACACTGGGGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAATGGCAAGTATGTGGTGGTATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS-3UTR CAA 90 bp | ATTAGAAACAGGGGCTGCAAGTGGCTTGCTTCTTCCAGGTGGGTTTTCTGTAAGTTGGCTTCAGTGCTATaGGTGATTGCCTCTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: IRNRGCKWLASSRWVFCKLASVL*VIASSS Trigger: GGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAA...CTTACAGAAAACCCACCTGGAAGAAGCAAGCCACTTGCAGCCCCTGTTTCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CCA 72 bp | GAGGTTTGGATGGTGCCCGCCGCCGCGCAGGCGCCTTaGCCGCTCAAGAGCGTGAAGGCCAGCGCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EVWMVPAAAQAP*PLKSVKASASS Trigger: GCTGCTGGCGCTGGCCTTCACGCTCTTGAGCGGCCAAGGCGCCTGCGCGGCGGCGGGCACCATCCAAACCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179781.8 |
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| CDS CAA 90 bp | TTCCTGGACAGAGGTTTGGATGGTGCCCGCCGCCGCGCAGGCGCCTaGGCCGCTCAAGAGCGTGAAGGCCAGCGCCAGCAGCAGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: FLDRGLDGARRRAGA*AAQEREGQRQQQRR Trigger: GCGGCGCTGCTGCTGGCGCTGGCCTTCACGCTCTTGAGCGGCCAAGGCGCCTGCGCGGCGGCGGGCACCATCCAAACCTCTGTCCAGGAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179781.8 |
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| CDS CCA 72 bp | GGTGCCTTGAGGAAACCAGCCGCCGCGCAGGCGCCTTaGCCGCTCAAGAGCGTGAAGGCCAGCGCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GALRKPAAAQAP*PLKSVKASASS Trigger: GCTGCTGGCGCTGGCCTTCACGCTCTTGAGCGGCCAAGGCGCCTGCGCGGCGGCTGGTTTCCTCAAGGCACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 72 bp | TGGTGCCTTGAGGAAACCAGCCGCCGCGCAGGCGCCTaGGCCGCTCAAGAGCGTGAAGGCCAGCGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: WCLEETSRRAGA*AAQEREGQRQQ Trigger: CTGCTGGCGCTGGCCTTCACGCTCTTGAGCGGCCAAGGCGCCTGCGCGGCGGCTGGTTTCCTCAAGGCACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 72 bp | GCACGGACCCACTTGACCCTGGGTGGCCGAGTAAGGTaGTTGCGGTCTGGGTCACTGCTGGCCCGGCACTCG | + |
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Preference number: 6 (lower is better) Translates to: ARTHLTLGGRVR*LRSGSLLARHS Trigger: CGAGTGCCGGGCCAGCAGTGACCCAGACCGCAACCACCTTACTCGGCCACCCAGGGTCAAGTGGGTCCGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 90 bp | GTGCCCGGTTCAAGGACCACCACGCTCGCCTGGGCACGGACCCACTaGACCCTGGGTGGCCGAGTAAGGTGGTTGCGGTCTGGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: VPGSRTTTLAWARTH*TLGGRVRWLRSGSL Trigger: CAGTGACCCAGACCGCAACCACCTTACTCGGCCACCCAGGGTCAAGTGGGTCCGTGCCCAGGCGAGCGTGGTGGTCCTTGAACCGGGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS TCA 72 bp | GGGCCAGAGGGCTGCCATGCGGCTCCGCACACGCAGTaGGATGGTTTCCCGAGTAGTGCCCTGGGCGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GPEGCHAAPHTQ*DGFPSSALGVG Trigger: ACCAACGCCCAGGGCACTACTCGGGAAACCATCTCACTGCGTGTGCGGAGCCGCATGGCAGCCCTCTGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS CCA 72 bp | CACGCTCGCCTGGGCACGGACCCACTTGACCCTGGGTaGCCGAGTAAGGTGGTTGCGGTCTGGGTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: HARLGTDPLDPG*PSKVVAVWVTA Trigger: AGCAGTGACCCAGACCGCAACCACCTTACTCGGCCACCCAGGGTCAAGTGGGTCCGTGCCCAGGCGAGCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 72 bp | TGGATGGTGCCCGGTTCAAGGACCACCACGCTCGCCTaGGCACGGACCCACTTGACCCTGGGTGGCCGAGTA | + |
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Preference number: 6 (lower is better) Translates to: WMVPGSRTTTLA*ARTHLTLGGRV Trigger: TACTCGGCCACCCAGGGTCAAGTGGGTCCGTGCCCAGGCGAGCGTGGTGGTCCTTGAACCGGGCACCATCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 72 bp | TCAAGGACCACCACGCTCGCCTGGGCACGGACCCACTaGACCCTGGGTGGCCGAGTAAGGTGGTTGCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SRTTTLAWARTH*TLGGRVRWLRS Trigger: AGACCGCAACCACCTTACTCGGCCACCCAGGGTCAAGTGGGTCCGTGCCCAGGCGAGCGTGGTGGTCCTTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 90 bp | CACGGTCCAGCCGGGCACCATCCCAGAGCTGGGAGCAGCTGTCGTTaGGAGCATTCCCTTCAAACCACCACTGGATCTCGGGGATGGGGC | + |
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Preference number: 6 (lower is better) Translates to: HGPAGHHPRAGSSCR*EHSLQTTTGSRGWG Trigger: GCCCCATCCCCGAGATCCAGTGGTGGTTTGAAGGGAATGCTCCAAACGACAGCTGCTCCCAGCTCTGGGATGGTGCCCGGCTGGACCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 72 bp | CCGGGCACCATCCCAGAGCTGGGAGCAGCTGTCGTTTaGAGCATTCCCTTCAAACCACCACTGGATCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PGTIPELGAAVV*SIPFKPPLDLG Trigger: CCCGAGATCCAGTGGTGGTTTGAAGGGAATGCTCCAAACGACAGCTGCTCCCAGCTCTGGGATGGTGCCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 72 bp | GCCGGGCACCATCCCAGAGCTGGGAGCAGCTGTCGTTaGGAGCATTCCCTTCAAACCACCACTGGATCTCGG | + |
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Preference number: 6 (lower is better) Translates to: AGHHPRAGSSCR*EHSLQTTTGSR Trigger: CCGAGATCCAGTGGTGGTTTGAAGGGAATGCTCCAAACGACAGCTGCTCCCAGCTCTGGGATGGTGCCCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 72 bp | CAGCTGTCGTTTGGAGCATTCCCTTCAAACCACCACTaGATCTCGGGGATGGGGCTGCCCACAGCCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: QLSFGAFPSNHH*ISGMGLPTASQ Trigger: CTGTGAGGCTGTGGGCAGCCCCATCCCCGAGATCCAGTGGTGGTTTGAAGGGAATGCTCCAAACGACAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 72 bp | GTATGCAGGTCGGGCAGAGTGTCCTCCTGCAGTACCTaGCCACCTCTCATCCAGCGGTGGCCAACGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VCRSGRVSSCST*PPLIQRWPTMS Trigger: TGACATCGTTGGCCACCGCTGGATGAGAGGTGGCAAGGTACTGCAGGAGGACACTCTGCCCGACCTGCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CAA 90 bp | AGAGCAGGTAAGCTGTGTTTTGGAGTTGACTTCCTGGACAGAGGTTaGGATGGTGCCCGGTTCAAGGACCACCACGCTCGCCTGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: RAGKLCFGVDFLDRG*DGARFKDHHARLGT Trigger: CGTGCCCAGGCGAGCGTGGTGGTCCTTGAACCGGGCACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CCA 72 bp | GGCGGCGCCAGGGTCATCCTCGTCCAGGGTCTGGTCTaGCTTCCGCCTCTTCTCATAGATAAAGATGATGGT | + |
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Preference number: 6 (lower is better) Translates to: GGARVILVQGLV*LPPLLIDKDDG Trigger: ACCATCATCTTTATCTATGAGAAGAGGCGGAAGCCAGACCAGACCCTGGACGAGGATGACCCTGGCGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CCA 72 bp | AAAGAGCAGGTAAGCTGTGTTTTGGAGTTGACTTCCTaGACAGAGGTTTGGATGGTGCCCGCCGCCGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: KEQVSCVLELTS*TEVWMVPAAAQ Trigger: CTGCGCGGCGGCGGGCACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS TCA 72 bp | CAGCCACGATGCGTCAAGGTTGCTGATGGTCAGCTGTaGCTTCTCAGGCGTGGATACCACCACATACTTGCC | + |
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Preference number: 6 (lower is better) Translates to: QPRCVKVADGQL*LLRRGYHHILA Trigger: GGCAAGTATGTGGTGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGCATCGTGGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
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| CDS TCA 72 bp | AACACCAGGACCTCAGCCACGATGCGTCAAGGTTGCTaGTGGTCAGCTGTGACTTCTCAGGCGTGGATACCA | + |
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Preference number: 6 (lower is better) Translates to: NTRTSATMRQGC*WSAVTSQAWIP Trigger: TGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGCATCGTGGCTGAGGTCCTGGTGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
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| CDS CAA 72 bp | AACCAACACCAGGACCTCAGCCACGATGCGTCAAGGTaGCTGATGGTCAGCTGTGACTTCTCAGGCGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: NQHQDLSHDASR*LMVSCDFSGVD Trigger: ATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGCATCGTGGCTGAGGTCCTGGTGTTGGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
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| CDS CAA 90 bp | ACGATGTCAACGCCACTGCTGTTCAAAGAGCAGGTAAGCTGTGTTTaGGAGTTGACTTCCTGGACAGAGGTTTGGATGGTGCCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: TMSTPLLFKEQVSCV*ELTSWTEVWMVPAA Trigger: GGCGGCGGGCACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCTTTGAACAGCAGTGGCGTTGACATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CAA 90 bp | GATGATGGTAACCAACACCAGGACCTCAGCCACGATGCGTCAAGGTaGCTGATGGTCAGCTGTGACTTCTCAGGCGTGGATACCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: DDGNQHQDLSHDASR*LMVSCDFSGVDTTT Trigger: TGTGGTGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGCATCGTGGCTGAGGTCCTGGTGTTGGTTACCATCATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178383.8 |
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| CDS CAA 90 bp | TTCGCAAGCTCTCCCTCACTGGAATGCTCTGATTTCTTTCCGACCTaGATCCTGGGTGGCCCTTCCACATTGATCTCGCTTCTGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: FASSPSLECSDFFPT*ILGGPSTLISLLPT Trigger: TGTGGGCAGAAGCGAGATCAATGTGGAAGGGCCACCCAGGATCAAGGTCGGAAAGAAATCAGAGCATTCCAGTGAGGGAGAGCTTGCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS TCA 72 bp | CGTAGGTGCCAGGGTCAACATTTACGTCAAGGTTGCTaGTGGTCAGCTGTGACTTCTCAGGCGTGGATACCA | + |
|
Preference number: 6 (lower is better) Translates to: RRCQGQHLRQGC*WSAVTSQAWIP Trigger: TGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGTAAATGTTGACCCTGGCACCTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS CAA 72 bp | CTGCTGTTCAAAGAGCAGGTAAGCTGTGTTTTGGAGTaGACTTCCTGGACAGAGGTTTGGATGGTGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLFKEQVSCVLE*TSWTEVWMVPA Trigger: GGCGGGCACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCTTTGAACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CAA 90 bp | ACGATGTCAACGCCACTGCTGTTCAAAGAGCAGGTAAGCTGTGTTTaGGAGTTGACTTCCTGGACAGAGGTTTGGATGGTGCCCGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TMSTPLLFKEQVSCV*ELTSWTEVWMVPGS Trigger: TGAACCGGGCACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCTTTGAACAGCAGTGGCGTTGACATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 90 bp | CTGATGGTCAGCTGTGACTTCTCAGGCGTGGATACCACCACATACTaGCCATTGGCTTCAGTGCTATTGGTGATTGCCTCTTCTTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LMVSCDFSGVDTTTY*PLASVLLVIASSSP Trigger: TGGGGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAATGGCAAGTATGTGGTGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CCA 72 bp | AAAGAGCAGGTAAGCTGTGTTTTGGAGTTGACTTCCTaGACAGAGGTTTGGATGGTGCCCGGTTCAAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: KEQVSCVLELTS*TEVWMVPGSRT Trigger: GGTCCTTGAACCGGGCACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 72 bp | CTGCTGTTCAAAGAGCAGGTAAGCTGTGTTTTGGAGTaGACTTCCTGGACAGAGGTTTGGATGGTGCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLFKEQVSCVLE*TSWTEVWMVPG Trigger: ACCGGGCACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCTTTGAACAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067036.12 |
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| CDS CAA 72 bp | TCTCCCTCACTGGAATGCTCTGATTTCTTTCCGACCTaGATCCTGGGTGGCCCTTCCACATTGATCTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPSLECSDFFPT*ILGGPSTLISL Trigger: AAGCGAGATCAATGTGGAAGGGCCACCCAGGATCAAGGTCGGAAAGAAATCAGAGCATTCCAGTGAGGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CAA 90 bp | TCAGGCGTGGATACCACCACATACTTGCCATTGGCTTCAGTGCTATaGGTGATTGCCTCTTCTTCCCCAGTGTCAGAGGTCTTAAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGVDTTTYLPLASVL*VIASSSPVSEVLNQ Trigger: CTGGTTTAAGACCTCTGACACTGGGGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAATGGCAAGTATGTGGTGGTATCCACGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS TCA 72 bp | GTCAACATTTACGTCAAGGTTGCTGATGGTCAGCTGTaGCTTCTCAGGCGTGGATACCACCACATACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VNIYVKVADGQL*LLRRGYHHILA Trigger: GGCAAGTATGTGGTGGTATCCACGCCTGAGAAGTCACAGCTGACCATCAGCAACCTTGACGTAAATGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000179781.8 |
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| CDS CAA 72 bp | ACGCCACTGCTGTTCAAAGAGCAGGTAAGCTGTGTTTaGGAGTTGACTTCCTGGACAGAGGTTTGGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TPLLFKEQVSCV*ELTSWTEVWMV Trigger: CACCATCCAAACCTCTGTCCAGGAAGTCAACTCCAAAACACAGCTTACCTGCTCTTTGAACAGCAGTGGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067036.12 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS CAA 72 bp | GACTTCTCAGGCGTGGATACCACCACATACTTGCCATaGGCTTCAGTGCTATTGGTGATTGCCTCTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DFSGVDTTTYLP*ASVLLVIASSS Trigger: GGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAATGGCAAGTATGTGGTGGTATCCACGCCTGAGAAGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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| CDS GCA 72 bp | CACATACTTGCCATTGGCTTCAGTGCTATTGGTGATTaGCTCTTCTTCCCCAGTGTCAGAGGTCTTAAACCA | + |
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Preference number: 6 (lower is better) Translates to: HILAIGFSAIGD*LFFPSVRGLKP Trigger: TGGTTTAAGACCTCTGACACTGGGGAAGAAGAGGCAATCACCAATAGCACTGAAGCCAATGGCAAGTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067036.12 ENSMUST00000105381.5 ENSMUST00000178383.8 ENSMUST00000179781.8 |
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