Pregenerated sensors for BSCL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071657Ensembl transcript IDs: ENSMUST00000086058.13, ENSMUST00000159634.8, ENSMUST00000159653.2, ENSMUST00000160556.8, ENSMUST00000160897.8, ENSMUST00000171649.8
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGTTGCCTGAGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATC | + |
|
Preference number: 1 (lower is better) Translates to: ALPEATQSLRGKGRC*GRGRWVGLCQQSCI Trigger: GATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR TCA 90 bp | GGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCCTaGGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCTGAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: GIHPLFRNWSRSGVA*GYPESQGQGQMLRQ Trigger: CTGCCTCAGCATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR GCA 90 bp | GTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTaGCTGAGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: VRNSPFVQELEQVGR*LRLPRVSGARADAE Trigger: CTCAGCATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR GCA 90 bp | GTAGGCTCCATACATCTGGATGCGCTTGCTGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATACGAATTCTCCCTATAGTCAGAGTA | + |
|
Preference number: 1 (lower is better) Translates to: VGSIHLDALAVDLNN*SSCWHIRILPIVRV Trigger: TACTCTGACTATAGGGAGAATTCGTATGTGCCAACAACTGGAGCAATTATTGAGATCCACAGCAAGCGCATCCAGATGTATGGAGCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR CCA 90 bp | CATCTGGATGCGCTTGCTGTGGATCTCAATAATTGCTCCAGTTGTTaGCACATACGAATTCTCCCTATAGTCAGAGTAGAGTTCTACTTC | + |
|
Preference number: 1 (lower is better) Translates to: HLDALAVDLNNCSSC*HIRILPIVRVEFYF Trigger: GAAGTAGAACTCTACTCTGACTATAGGGAGAATTCGTATGTGCCAACAACTGGAGCAATTATTGAGATCCACAGCAAGCGCATCCAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGTCGGGCGTTGCCTGAGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCCCTTTGTTCAGGAACTaGAGCAGGTCGGGCGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: AGRALPEATQSLRGKGRCPLFRN*SRSGVA Trigger: GGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGG...GCATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGACCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCAGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: EVGGLASVSKAASSQEPSGKGRC*GRGRWV Trigger: AACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCC...TGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGATCTTCAGGGCTCTCACCATCCTCCGTCACATCCGACTGCTGGGTAGATGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: EGSSGLSPSSVTSDCWVDGKGRC*GRGRWV Trigger: AACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCC...ATCTACCCAGCAGTCGGATGTGACGGAGGATGGTGAGAGCCCTGAAGATCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTTCCTCAGACAGCTaGCCCTCTGTTCCTGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GGLASVSKAASSQEPSLASSSDS*PSVPEG Trigger: TCCCTCAGGAACAGAGGGCCAGCTGTCTGAGGAAGA...GGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCTGAGGGATCTTCAGGGCTCTCACCATCCTCCGTCACATCCGACTGCTGGTCTTCCTCAGACAGCTaGCCCTCTGTTCCTGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VPEGSSGLSPSSVTSDCWSSSDS*PSVPEG Trigger: TCCCTCAGGAACAGAGGGCCAGCTGTCTGAGGAAGA...CCAGCAGTCGGATGTGACGGAGGATGGTGAGAGCCCTGAAGATCCCTCAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACAGGGGCCGCTTCTCTaGTTTCTCTTCCTCAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: EVGGLASVSKAASSQEPSQGPLL*FLFLRQ Trigger: CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTG...TGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCTAGCCTCTGGCTCTTaGTCCTCCTCTCCATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LECEEFTLCSGTGAGRALLASGS*SSSPFR Trigger: CCTGAATGGAGAGGAGGAGCAAGAGCCAGAGGCTAG...CAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTGCTCTGTCGGATATTAACCTaGAGAGAGAAGCGGTGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: CQQSCIFPGAITSLWLLLCRILT*REKRWR Trigger: CCGCCACCGCTTCTCTCTGCAGGTTAATATCCGACA...GAGCAAGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCAGAAAGCGCTGGAATGTaGGGAATTCACCCTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: EVGGLASVSKAASSQEPSESAGM*GIHPLF Trigger: GAACAAAGGGTGAATTCCTCACATTCCAGCGCTTTC...TGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCTCTGTCAGCAAAGCTaGATCTTCCCAGGAGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: LECEEFTLCSGTGAGRALLCQQS*IFPGAI Trigger: GATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAG...CAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCATGGATCCGGAGGTAGGCTCCATACATCTGGATGCGCTTGCTGTGGATCTATGATGGGAAAGCGCTaGAATGTGAGGAATTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: GHGSGGRLHTSGCACCGSMMGKR*NVRNSP Trigger: GGGTGAATTCCTCACATTCCAGCGCTTTCCCATCAT...AGATCCACAGCAAGCGCATCCAGATGTATGGAGCCTACCTCCGGATCCATGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGTGGATGCGCTTGCTGTaGATCTCAATAATTGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: EAEVGGLASVSKAASSQEWMRLL*ISIIAP Trigger: TGGAGCAATTATTGAGATCCACAGCAAGCGCATCCA...CTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTGCTCGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATA | + |
|
Preference number: 2 (lower is better) Translates to: CQQSCIFPGAITSLWLLLVDLNN*SSCWHI Trigger: TATGTGCCAACAACTGGAGCAATTATTGAGATCCAC...GAGCAAGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR TCA 72 bp | GAGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EATQSLRGKGRC*GRGRWVGLCQQ Trigger: TTGCTGACAGAGGCCAACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR TCA 72 bp | CCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCCTaGGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PLFRNWSRSGVA*GYPESQGQGQM Trigger: CATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR GCA 72 bp | TCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTaGCTGAGGCTACCCAGAGTCTCAGGGGCAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPFVQELEQVGR*LRLPRVSGARA Trigger: TGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR GCA 72 bp | GGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTaGATCTTCCCAGGAGCCATCACTAGCCTCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRGRWVGLCQQS*IFPGAITSLWL Trigger: GAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACTAGCCGCAGAGGTAGGTGGGTaGGCCTCTGTCAGCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GGLASVSKAASSQEPSLAAEVGG*ASVSKA Trigger: AGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGC...GGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCCTGCAGAGGTAGGTGGGTaGGCCTCTGTCAGCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ECEEFTLCSGTGAGRALPAEVGG*ASVSKA Trigger: AGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGC...AGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCCTGAGGCTACCTACATCTGGATGCGCTaGCTGTGGATCTCAATAATT | + |
|
Preference number: 3 (lower is better) Translates to: EFTLCSGTGAGRALPEATYIWMR*LWISII Trigger: AATTATTGAGATCCACAGCAAGCGCATCCAGATGTA...GGTAGCCTCAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR GCA 72 bp | ATACATCTGGATGCGCTTGCTGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATACGAATTCTCCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: IHLDALAVDLNN*SSCWHIRILPI Trigger: TATAGGGAGAATTCGTATGTGCCAACAACTGGAGCAATTATTGAGATCCACAGCAAGCGCATCCAGATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGAGGGATCTTCAGGGCTCTCACCATCCTCCGTCACATCCGACTGCTGGACGTGGCCCACTTCCTaGGCCCACAGTAAGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPEGSSGLSPSSVTSDCWTWPTS*AHSKAG Trigger: CCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGT...CCAGCAGTCGGATGTGACGGAGGATGGTGAGAGCCCTGAAGATCCCTCAGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| 3UTR CAA 72 bp | TTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTaGCCTGAGGCTACCCAGAGTCTCAGGGGCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLCSGTGAGRA*PEATQSLRGKG Trigger: GCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159653.2 ENSMUST00000160897.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCCTGCCTGCGGGCACGGCCTaGCAAGACGTGGCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVRNSPFVQELEQVGRCLPAGTA*QDVAHF Trigger: GAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGG...CAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCAACTGCAGCATCAGCCTaGGGGCACGGCCTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVGGLASVSKAASSQEPSTAASA*GHGLPR Trigger: TCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGT...TGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTGCTCGGACAGCAGGGGGTCTaGCCCCAGCCTCAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQQSCIFPGAITSLWLLLGQQGV*PQPQAL Trigger: CAAAGCCTGAGGCTGGGGCCAGACCCCCTGCTGTCC...GAGCAAGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | TGGAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCTGCAGAGAGAAGCGGTaGCGGGGCCAGACAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: WNVRNSPFVQELEQVGRCCREKR*RGQTAP Trigger: GGGTGCTGTCTGGCCCCGCCACCGCTTCTCTCTGCA...GCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS-3UTR TCA 90 bp | GTCGGGCGTTGCCTGAGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCTGAGGTTCAAGCTCTAAGGTaGCTCGATATGGCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGRCLRLPRVSGARADAEVQALR*LDMAVH Trigger: ATGGACAGCCATATCGAGTCACCTTAGAGCTTGAAC...CTCAGCATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTGCTCCTCCTCTCCCAGCCTCAGGCTTTaGGTTCCTGGCTGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAASSQEPSLASGSCSSSPSLRL*VPGWSS Trigger: GGAAGACCAGCCAGGAACTCAAAGCCTGAGGCTGGG...AGAGGAGGAGCAAGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCCCTGCGGGCACGGCCTaGCAAGACGTGGCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQGKRCMMGKRWNVRNSPPAGTA*QDVAHF Trigger: GAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGG...GGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCCTGCGGGCACGGCCTaGCAAGACGTGGCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAREKVYDGKALECEEFTPAGTA*QDVAHF Trigger: GAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGG...GGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATGCTGAGGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTGGTAGATTCCTGACCTaGAGAGAGAAGCGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ADAEAEVGGLASVSKAASGRFLT*REKRWR Trigger: CCGCCACCGCTTCTCTCTGCAGGTCAGGAATCTACC...AGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGCCTCAGCATCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTCCTGCGGGCACGGCCTaGCAAGACGTGGCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AREKVYDGKALECEEFTLPAGTA*QDVAHF Trigger: GAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGG...AAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTCCTCCTCTCCATTCAGGGGCCGCTTCTCTGGTTTCTCTTCCTCAGACAGAAGAGCACCCCAAACTaGAGCATCAGCCTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLSIQGPLLWFLFLRQKSTPN*SISLRA Trigger: TGCCCGCAGGCTGATGCTGCAGTTTGGGGTGCTCTT...CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTGAATGGAGAGGAGGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCACGTGGCCCACTTCCTaGGCCCACAGTAAGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQGKRCMMGKRWNVRNSPTWPTS*AHSKAG Trigger: CCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGT...GGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACAAACAGCAGGAGGCTaGAGAACAGCAGCGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EVGGLASVSKAASSQEPSQTAGG*RTAACR Trigger: TCGACACGCTGCTGTTCTCCAGCCTCCTGCTGTTTG...TGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGAAGTGGGCATGGATCCGGAGGTAGGCTCCATACATCTGGATGCGCTTCAGGCTTTGAGTTCCTaGCTGGTCTTCCACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSEVGMDPEVGSIHLDALQALSS*LVFHRD Trigger: GTCCCTGTGGAAGACCAGCCAGGAACTCAAAGCCTG...AAGCGCATCCAGATGTATGGAGCCTACCTCCGGATCCATGCCCACTTCACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTCCTGCGGGCACGGCCTaGCAAGACGTGGCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGKRCMMGKRWNVRNSPFPAGTA*QDVAHF Trigger: GAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGG...AAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | CCCACGAAGGCGCAGGTCATGGGGAAGTTGTACAGCAGGTACCTGAGCCCAGTGGCAAAAGAAGGATGGTaGAGAAGAGCACCCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PTKAQVMGKLYSRYLSPVAKEGW*RRAPQT Trigger: AGTTTGGGGTGCTCTTCTGCACCATCCTTCTTTTGC...CACTGGGCTCAGGTACCTGCTGTACAACTTCCCCATGACCTGCGCCTTCGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGCAGAGAGAAGCGGTaGCGGGGCCAGACAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: AREKVYDGKALECEEFTLCREKR*RGQTAP Trigger: GGGTGCTGTCTGGCCCCGCCACCGCTTCTCTCTGCA...AAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTCCACTCTTAGCCAGTaGGACATTGGCAACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASVSKAASSQEPSLASGSSTLSQ*DIGNRE Trigger: TTCCCTGTTGCCAATGTCTCACTGGCTAAGAGTGGA...AGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GAREKVYDGKALECEEFTGKGRC*GRGRWV Trigger: AACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCC...GGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCCCCAGCCTCAGGCTTTaGGTTCCTGGCTGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQGKRCMMGKRWNVRNSPPSLRL*VPGWSS Trigger: GGAAGACCAGCCAGGAACTCAAAGCCTGAGGCTGGG...GGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACTGCAGCATCAGCCTaGGGGCACGGCCTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGAREKVYDGKALECEEFTAASA*GHGLPR Trigger: TCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGT...GAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTACGTGGCCCACTTCCTaGGCCCACAGTAAGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGKRCMMGKRWNVRNSPFTWPTS*AHSKAG Trigger: CCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGT...AAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCTGGATGCGCTTGCTGTaGATCTCAATAATTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGRWVGLCQQSCIFPGAWMRLL*ISIIAP Trigger: TGGAGCAATTATTGAGATCCACAGCAAGCGCATCCA...GGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS-3UTR CCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGTGCAGAGAGAAGCGGTaGCGGGGCCAGACAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRCREKR*RGQTAP Trigger: GGGTGCTGTCTGGCCCCGCCACCGCTTCTCTCTGCA...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTGCTCCTCCTCTCCACTTTGTCTGATCCTTTaGTCTGGTCTCTGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AASSQEPSLASGSCSSSPLCLIL*SGLCMS Trigger: AGACATGCAGAGACCAGATCAAAGGATCAGACAAAG...TGGAGAGGAGGAGCAAGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATACTGCAGCATCAGCCTaGGGGCACGGCCTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LREQGKRCMMGKRWNVRNTAASA*GHGLPR Trigger: TCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGT...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTGTCTACTTCCAGGAGCTaGTTCTGTTCAGCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCQQSCIFPGAITSLWLLSTSRS*FCSAKP Trigger: TGGCTTCGCTGAACAGAAGCAGCTCCTGGAAGTAGA...CAAGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGACGTGGCCCACTTCCTaGGCCCACAGTAAGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECETWPTS*AHSKAG Trigger: CCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGT...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGTGCAGAGAGAAGCGGTaGCGGGGCCAGACAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECECREKR*RGQTAP Trigger: GGGTGCTGTCTGGCCCCGCCACCGCTTCTCTCTGCA...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | TGGAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCGTGAAGAAGTGGAGATaGTTCGGCCACCTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WNVRNSPFVQELEQVGRCVKKWR*FGHLWY Trigger: ATACCAGAGGTGGCCGAATCATCTCCACTTCTTCAC...GCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR TCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRGKGRC*GRGRWV Trigger: AACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCC...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAAGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEEGKGRC*GRGRWV Trigger: AACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCC...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGACTGCAGCATCAGCCTaGGGGCACGGCCTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECETAASA*GHGLPR Trigger: TCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGT...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCAAAGAGCACCCCAAACTaGAGCATCAGCCTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: REQGKRCMMGKRWNVRNSKSTPN*SISLRA Trigger: TGCCCGCAGGCTGATGCTGCAGTTTGGGGTGCTCTT...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTCCTCCTCTCCATTCAGGGGCCGCTTCTCTGGTTTCTCTTCCTCAGACAGTCTGCATGTCTCTCTTaGCCCAGCTTCTCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLSIQGPLLWFLFLRQSACLS*PSFSSL Trigger: CAAAGAAGAGAAGCTGGGGCAAGAGAGACATGCAGA...CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTGAATGGAGAGGAGGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGACGTGGCCCACTTCCTaGGCCCACAGTAAGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLREQGKRCMMGKRWTWPTS*AHSKAG Trigger: CCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGT...CCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCGAAGGCGCAGGTCATaGGGAAGTTGTACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAREKVYDGKALECEEFTRRRRS*GSCTAG Trigger: ACCTGCTGTACAACTTCCCCATGACCTGCGCCTTCG...GGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGCGAAGGCGCAGGTCATaGGGAAGTTGTACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MGKRWNVRNSPFVQELEQRRRRS*GSCTAG Trigger: ACCTGCTGTACAACTTCCCCATGACCTGCGCCTTCG...CTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCAACATGCCCAAGTCTTaGTTCACAGGGGATTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAREKVYDGKALECEEFTNMPKS*FTGDSG Trigger: GCCCGAATCCCCTGTGAATCAAGACTTGGGCATGTT...GGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | CCACACAAGCAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTGGCAAGGGCAGATGCTaGGGCAGAGGTAGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHKQLPQNSLLREQGKRCGKGRC*GRGRWV Trigger: AACCCACCTACCTCTGCCTCAGCATCTGCCCTTGCC...ACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTGCTTGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTCCTCCTCTCCATTCAGGGGCCGCTTCTCTGGTTTCTCTTCCTCAGACAGTTCCTCGTCTTTGTCTaGTCCTTTGATCTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLSIQGPLLWFLFLRQFLVFV*SFDLVS Trigger: AGAGACCAGATCAAAGGATCAGACAAAGACGAGGAA...CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTGAATGGAGAGGAGGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGCAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGACTGCAGCATCAGCCTaGGGGCACGGCCTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKQLPQNSLLREQGKRCMTAASA*GHGLPR Trigger: TCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGT...CATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTGCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAAAAGAGCACCCCAAACTaGAGCATCAGCCTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEEKSTPN*SISLRA Trigger: TGCCCGCAGGCTGATGCTGCAGTTTGGGGTGCTCTT...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTAAGAGCACCCCAAACTaGAGCATCAGCCTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCKSTPN*SISLRA Trigger: TGCCCGCAGGCTGATGCTGCAGTTTGGGGTGCTCTT...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGCATCTTCCCAGGAGCCATCACTAGCCTCTGGCTCTTGCTCCTCCTCTAAAGCAAAAGAAGGATaGTGCAGAAGAGCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KAASSQEPSLASGSCSSSKAKEG*CRRAPQ Trigger: TTGGGGTGCTCTTCTGCACCATCCTTCTTTTGCTTT...AGAGGAGGAGCAAGAGCCAGAGGCTAGTGATGGCTCCTGGGAAGATGCAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCAGCAGAGAGAGGCGGTaGAGGAATCACAGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGAREKVYDGKALECEEFSRERR*RNHSLS Trigger: GGACAGACTGTGATTCCTCCACCGCCTCTCTCTGCT...GAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTCAAACAGCAGGAGGCTaGAGAACAGCAGCGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AREKVYDGKALECEEFTLQTAGG*RTAACR Trigger: TCGACACGCTGCTGTTCTCCAGCCTCCTGCTGTTTG...AAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCATCTTCCTCAGACAGCTaGCCCTCTGTTCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: REQGKRCMMGKRWNVRNSSSSDS*PSVPEG Trigger: TCCCTCAGGAACAGAGGGCCAGCTGTCTGAGGAAGA...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGGACAGCAGGGGGTCTaGCCCCAGCCTCAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLLREQGKRCMMGKRWNGQQGV*PQPQAL Trigger: CAAAGCCTGAGGCTGGGGCCAGACCCCCTGCTGTCC...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCTCCACTCTTAGCCAGTaGGACATTGGCAACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAREKVYDGKALECEEFTSTLSQ*DIGNRE Trigger: TTCCCTGTTGCCAATGTCTCACTGGCTAAGAGTGGA...GGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCAAACATGCCCAAGTCTTaGTTCACAGGGGATTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REQGKRCMMGKRWNVRNSNMPKS*FTGDSG Trigger: GCCCGAATCCCCTGTGAATCAAGACTTGGGCATGTT...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTCTACTTCCAGGAGCTaGTTCTGTTCAGCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQGKRCMMGKRWNVRNSPSTSRS*FCSAKP Trigger: TGGCTTCGCTGAACAGAAGCAGCTCCTGGAAGTAGA...GGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCATGTCGGATATTAACCTaGAGAGAGAAGCGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: REQGKRCMMGKRWNVRNSCRILT*REKRWR Trigger: CCGCCACCGCTTCTCTCTGCAGGTTAATATCCGACA...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTCTAGCCTCTGGCTCTTaGTCCTCCTCTCCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCLASGS*SSSPFR Trigger: CCTGAATGGAGAGGAGGAGCAAGAGCCAGAGGCTAG...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAGCAGAGAGAGGCGGTaGAGGAATCACAGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRSRERR*RNHSLS Trigger: GGACAGACTGTGATTCCTCCACCGCCTCTCTCTGCT...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTAGCAGAGAGAGGCGGTaGAGGAATCACAGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGKRCMMGKRWNVRNSPFSRERR*RNHSLS Trigger: GGACAGACTGTGATTCCTCCACCGCCTCTCTCTGCT...AAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGCAAACAGCAGGAGGCTaGAGAACAGCAGCGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRQTAGG*RTAACR Trigger: TCGACACGCTGCTGTTCTCCAGCCTCCTGCTGTTTG...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAACAAACAGCAGGAGGCTaGAGAACAGCAGCGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEEQTAGG*RTAACR Trigger: TCGACACGCTGCTGTTCTCCAGCCTCCTGCTGTTTG...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTTCTTCCTCAGACAGCTaGCCCTCTGTTCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGKRCMMGKRWNVRNSPFSSSDS*PSVPEG Trigger: TCCCTCAGGAACAGAGGGCCAGCTGTCTGAGGAAGA...AAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATCTTCCTCAGACAGCTaGCCCTCTGTTCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEESSSDS*PSVPEG Trigger: TCCCTCAGGAACAGAGGGCCAGCTGTCTGAGGAAGA...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAACAGGGGCCGCTTCTCTaGTTTCTCTTCCTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEEQGPLL*FLFLRQ Trigger: CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTG...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | CGCTGGAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTCTGATCCTTTGATCTaGTCTCTGCATGTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RWNVRNSPFVQELEQVGRSDPLI*SLHVSL Trigger: AAGAGAGACATGCAGAGACCAGATCAAAGGATCAGA...ACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATAACATGCCCAAGTCTTaGTTCACAGGGGATTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LREQGKRCMMGKRWNVRNNMPKS*FTGDSG Trigger: GCCCGAATCCCCTGTGAATCAAGACTTGGGCATGTT...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATGCGCTTGCTGTGGATCTCAATAATTGCTCCAGTTGTTGGAACATGCCCAAGTCTTaGTTCACAGGGGATTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDALAVDLNNCSSCWNMPKS*FTGDSG Trigger: GCCCGAATCCCCTGTGAATCAAGACTTGGGCATGTT...CCAACAACTGGAGCAATTATTGAGATCCACAGCAAGCGCATCCAGATGTATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCAGTGAAGAAGTGGAGATaGTTCGGCCACCTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: REQGKRCMMGKRWNVRNSVKKWR*FGHLWY Trigger: ATACCAGAGGTGGCCGAATCATCTCCACTTCTTCAC...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCATCTACTTCCAGGAGCTaGTTCTGTTCAGCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: REQGKRCMMGKRWNVRNSSTSRS*FCSAKP Trigger: TGGCTTCGCTGAACAGAAGCAGCTCCTGGAAGTAGA...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGTCGGGCGTTGCCTGAGGCTAGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: RNSPFVQELEQVGRCLRLVDLNN*SSCWHI Trigger: TATGTGCCAACAACTGGAGCAATTATTGAGATCCAC...TAGCCTCAGGCAACGCCCGACCTGCTCCAGTTCCTGAACAAAGGGTGAATTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTTGTCGGATATTAACCTaGAGAGAGAAGCGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCCRILT*REKRWR Trigger: CCGCCACCGCTTCTCTCTGCAGGTTAATATCCGACA...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATCTCTGTCAGCAAAGCTaGATCTTCCCAGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LREQGKRCMMGKRWNVRNLCQQS*IFPGAI Trigger: GATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAG...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTCTCTGTCAGCAAAGCTaGATCTTCCCAGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGKRCMMGKRWNVRNSPFLCQQS*IFPGAI Trigger: GATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAG...AAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGCGAAGGCGCAGGTCATaGGGAAGTTGTACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLREQGKRCMMGKRWNVRRRRS*GSCTAG Trigger: ACCTGCTGTACAACTTCCCCATGACCTGCGCCTTCG...CACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGCGAAGGCGCAGGTCATaGGGAAGTTGTACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECERRRRS*GSCTAG Trigger: ACCTGCTGTACAACTTCCCCATGACCTGCGCCTTCG...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGTCTTCCTCAGACAGCTaGCCCTCTGTTCCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLREQGKRCMMGKRWNVSSSDS*PSVPEG Trigger: TCCCTCAGGAACAGAGGGCCAGCTGTCTGAGGAAGA...CACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGCAGGGGCCGCTTCTCTaGTTTCTCTTCCTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECEQGPLL*FLFLRQ Trigger: CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTG...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | CCACACAAGCAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTCAGGGGCCGCTTCTCTaGTTTCTCTTCCTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PHKQLPQNSLLREQGKRCQGPLL*FLFLRQ Trigger: CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTG...ACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTGCTTGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGTCCACTCTTAGCCAGTaGGACATTGGCAACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRSTLSQ*DIGNRE Trigger: TTCCCTGTTGCCAATGTCTCACTGGCTAAGAGTGGA...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCCACTCTTAGCCAGTaGGACATTGGCAACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LREQGKRCMMGKRWNVRNSTLSQ*DIGNRE Trigger: TTCCCTGTTGCCAATGTCTCACTGGCTAAGAGTGGA...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAACATGCCCAAGTCTTaGTTCACAGGGGATTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLREQGKRCMMGKRWNVNMPKS*FTGDSG Trigger: GCCCGAATCCCCTGTGAATCAAGACTTGGGCATGTT...CACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTCCTCCTCTCCATTCAGGGGCCGCTTCTCTGGTTTCTCTTCCTCAGACAGTATAACATGAAACAGTaGCTAAGAACATGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLSIQGPLLWFLFLRQYNMKQ*LRTCPS Trigger: ACTTGGGCATGTTCTTAGTCACTGTTTCATGTTATA...CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTGAATGGAGAGGAGGAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR TCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGGTGAAGAAGTGGAGATaGTTCGGCCACCTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRVKKWR*FGHLWY Trigger: ATACCAGAGGTGGCCGAATCATCTCCACTTCTTCAC...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAAGTGAAGAAGTGGAGATaGTTCGGCCACCTCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEEVKKWR*FGHLWY Trigger: ATACCAGAGGTGGCCGAATCATCTCCACTTCTTCAC...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTCTGATCCTTTaGTCTGGTCTCTGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAREKVYDGKALECEEFTLCLIL*SGLCMS Trigger: AGACATGCAGAGACCAGATCAAAGGATCAGACAAAG...GGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTCCTCGTCTTTGTCTaGTCCTTTGATCTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQGKRCMMGKRWNVRNSPFLVFV*SFDLVS Trigger: AGAGACCAGATCAAAGGATCAGACAAAGACGAGGAA...GGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATAAGAGCACCCCAAACTaGAGCATCAGCCTGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLREQGKRCMMGKRWNKSTPN*SISLRA Trigger: TGCCCGCAGGCTGATGCTGCAGTTTGGGGTGCTCTT...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTTCTACTTCCAGGAGCTaGTTCTGTTCAGCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCSTSRS*FCSAKP Trigger: TGGCTTCGCTGAACAGAAGCAGCTCCTGGAAGTAGA...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGTCTACTTCCAGGAGCTaGTTCTGTTCAGCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRSTSRS*FCSAKP Trigger: TGGCTTCGCTGAACAGAAGCAGCTCCTGGAAGTAGA...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGTGTCGGATATTAACCTaGAGAGAGAAGCGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECECRILT*REKRWR Trigger: CCGCCACCGCTTCTCTCTGCAGGTTAATATCCGACA...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | CCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCCTAGCCTCTGGCTCTTaGTCCTCCTCTCCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQNSLLREQGKRCMMGKRLASGS*SSSPFR Trigger: CCTGAATGGAGAGGAGGAGCAAGAGCCAGAGGCTAG...GCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGCTCTGTCAGCAAAGCTaGATCTTCCCAGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLLREQGKRCMMGKRWNVLCQQS*IFPGAI Trigger: GATGGCTCCTGGGAAGATGCAGCTTTGCTGACAGAG...CACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTCCAGTTGTTGGCACATACGAATTCTCCCTATAGTCAGAGTAGAGTTCTAAGCAGAGAGAGGCGGTaGAGGAATCACAGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLQLLAHTNSPYSQSRVLSRERR*RNHSLS Trigger: GGACAGACTGTGATTCCTCCACCGCCTCTCTCTGCT...TAGAACTCTACTCTGACTATAGGGAGAATTCGTATGTGCCAACAACTGGAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGACAGGCTTTGAGTTCCTaGCTGGTCTTCCACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLPQNSLLREQGKRCMMGQALSS*LVFHRD Trigger: GTCCCTGTGGAAGACCAGCCAGGAACTCAAAGCCTG...TCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | CCACACAAGCAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTTCCACTCTTAGCCAGTaGGACATTGGCAACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHKQLPQNSLLREQGKRCSTLSQ*DIGNRE Trigger: TTCCCTGTTGCCAATGTCTCACTGGCTAAGAGTGGA...ACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTGCTTGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTGTTCAAGCTCTAAGGTaGCTCGATATGGCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCVQALR*LDMAVH Trigger: ATGGACAGCCATATCGAGTCACCTTAGAGCTTGAAC...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGGCAAAAGAAGGATGGTaGAGAAGAGCACCCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLREQGKRCMMGKRWNVRAKEGW*RRAPQT Trigger: AGTTTGGGGTGCTCTTCTGCACCATCCTTCTTTTGC...CCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTGCAAAAGAAGGATGGTaGAGAAGAGCACCCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCAKEGW*RRAPQT Trigger: AGTTTGGGGTGCTCTTCTGCACCATCCTTCTTTTGC...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATCTGCATGTCTCTCTTaGCCCAGCTTCTCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEESACLS*PSFSSL Trigger: CAAAGAAGAGAAGCTGGGGCAAGAGAGACATGCAGA...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATAGCAGAGAGAGGCGGTaGAGGAATCACAGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLLREQGKRCMMGKRWNSRERR*RNHSLS Trigger: GGACAGACTGTGATTCCTCCACCGCCTCTCTCTGCT...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATCAAACAGCAGGAGGCTaGAGAACAGCAGCGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLREQGKRCMMGKRWNQTAGG*RTAACR Trigger: TCGACACGCTGCTGTTCTCCAGCCTCCTGCTGTTTG...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATCAGGGGCCGCTTCTCTaGTTTCTCTTCCTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLLREQGKRCMMGKRWNQGPLL*FLFLRQ Trigger: CTGTCTGAGGAAGAGAAACCAGAGAAGCGGCCCCTG...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGCAAAAGAAGGATGGTaGAGAAGAGCACCCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECEAKEGW*RRAPQT Trigger: AGTTTGGGGTGCTCTTCTGCACCATCCTTCTTTTGC...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATAAAGCAAAAGAAGGATaGTGCAGAAGAGCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LREQGKRCMMGKRWNVRNKAKEG*CRRAPQ Trigger: TTGGGGTGCTCTTCTGCACCATCCTTCTTTTGCTTT...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAAAAAGCAAAAGAAGGATaGTGCAGAAGAGCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IKGAREKVYDGKALECEEKAKEG*CRRAPQ Trigger: TTGGGGTGCTCTTCTGCACCATCCTTCTTTTGCTTT...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTAAAGCAAAAGAAGGATaGTGCAGAAGAGCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGKRCMMGKRWNVRNSPFKAKEG*CRRAPQ Trigger: TTGGGGTGCTCTTCTGCACCATCCTTCTTTTGCTTT...AAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTGGATGCGCTTGCTGTaGATCTCAATAATTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LREQGKRCMMGKRWNVRNWMRLL*ISIIAP Trigger: TGGAGCAATTATTGAGATCCACAGCAAGCGCATCCA...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGGCAAAAGAAGGATGGTaGAGAAGAGCACCCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLREQGKRCMMGKRWAKEGW*RRAPQT Trigger: AGTTTGGGGTGCTCTTCTGCACCATCCTTCTTTTGC...CCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGTGGATGCGCTTGCTGTaGATCTCAATAATTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLREQGKRCMMGKRWNVWMRLL*ISIIAP Trigger: TGGAGCAATTATTGAGATCCACAGCAAGCGCATCCA...CACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTTCAAGCTCTAAGGTaGCTCGATATGGCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLLREQGKRCMMGKRWNVQALR*LDMAVH Trigger: ATGGACAGCCATATCGAGTCACCTTAGAGCTTGAAC...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGGTTCAAGCTCTAAGGTaGCTCGATATGGCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPQNSLLREQGKRCMMGKVQALR*LDMAVH Trigger: ATGGACAGCCATATCGAGTCACCTTAGAGCTTGAAC...CTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCATATAACATGAAACAGTaGCTAAGAACATGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: REQGKRCMMGKRWNVRNSYNMKQ*LRTCPS Trigger: ACTTGGGCATGTTCTTAGTCACTGTTTCATGTTATA...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCVDLNN*SSCWHI Trigger: TATGTGCCAACAACTGGAGCAATTATTGAGATCCAC...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGATGCGCTTGCTGTaGATCTCAATAATTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQNSLLREQGKRCMMGKRWMRLL*ISIIAP Trigger: TGGAGCAATTATTGAGATCCACAGCAAGCGCATCCA...GCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCACACAAGCAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTCTGATCCTTTGATCTaGTCTCTGCATGTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPHKQLPQNSLLREQGKRSDPLI*SLHVSL Trigger: AAGAGAGACATGCAGAGACCAGATCAAAGGATCAGA...CCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTGCTTGTGTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTTATAACATGAAACAGTaGCTAAGAACATGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: REKVYDGKALECEEFTLCYNMKQ*LRTCPS Trigger: ACTTGGGCATGTTCTTAGTCACTGTTTCATGTTATA...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECEVDLNN*SSCWHI Trigger: TATGTGCCAACAACTGGAGCAATTATTGAGATCCAC...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATTGGATGCGCTTGCTGTaGATCTCAATAATTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLREQGKRCMMGKRWNWMRLL*ISIIAP Trigger: TGGAGCAATTATTGAGATCCACAGCAAGCGCATCCA...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGTATAACATGAAACAGTaGCTAAGAACATGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIKGAREKVYDGKALECEYNMKQ*LRTCPS Trigger: ACTTGGGCATGTTCTTAGTCACTGTTTCATGTTATA...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGTATAACATGAAACAGTaGCTAAGAACATGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLREQGKRCMMGKRWNVYNMKQ*LRTCPS Trigger: ACTTGGGCATGTTCTTAGTCACTGTTTCATGTTATA...CACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | CCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: PQNSLLREQGKRCMMGKRVDLNN*SSCWHI Trigger: TATGTGCCAACAACTGGAGCAATTATTGAGATCCAC...GCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGGTGGATCTCAATAATTaGTCCAGTTGTTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLREQGKRCMMGKRWVDLNN*SSCWHI Trigger: TATGTGCCAACAACTGGAGCAATTATTGAGATCCAC...CCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS CCA 90 bp | ACCCCAAACTGCAGCATCAGCCTGCGGGCACGGCCTGCCAAGACGTaGCCCACTTCCTGGGCCCACAGTAAGGCGGGGACTGGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPNCSISLRARPAKT*PTSWAHSKAGTGGS Trigger: TGACCCACCAGTCCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGTTTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CCA 90 bp | AGCATCAGCCTGCGGGCACGGCCTGCCAAGACGTGGCCCACTTCCTaGGCCCACAGTAAGGCGGGGACTGGTGGGTCATTGACCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SISLRARPAKTWPTS*AHSKAGTGGSLTMM Trigger: CATCATGGTCAATGACCCACCAGTCCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGGCTGATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CCA 90 bp | CTTCCAGGAGCTGCTTCTGTTCAGCGAAGCCAAACAGCAGGAGGCTaGAGAACAGCAGCGTGTCGAGCACCTGGAGCAGCTGCGAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPGAASVQRSQTAGG*RTAACRAPGAAASG Trigger: ACCGCTCGCAGCTGCTCCAGGTGCTCGACACGCTGCTGTTCTCCAGCCTCCTGCTGTTTGGCTTCGCTGAACAGAAGCAGCTCCTGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000159653.2 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS GCA 90 bp | GACACCCAAAGCAAAAGAAGGATGGTGCAGAAGAGCACCCCAAACTaGAGCATCAGCCTGCGGGCACGGCCTGCCAAGACGTGGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DTQSKRRMVQKSTPN*SISLRARPAKTWPT Trigger: AGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGTTTGGGGTGCTCTTCTGCACCATCCTTCTTTTGCTTTGGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGGTAGGTGGGTTGGCCTCTGTCAGCAAAGCTGCATCTTCCCAGGAGCCGGGACTGGTGGGTCATaGACCATGATGGGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRWVGLCQQSCIFPGAGTGGS*TMMGTA Trigger: TGCTGTCCCCATCATGGTCAATGACCCACCAGTCCC...GGCTCCTGGGAAGATGCAGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGATCTTCAGGGCTCTCACCATCCTCCGTCACATCCGACTGCTGGGTAGATCCCCAGCCTCAGGCTTaGAGTTCCTGGCTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGSSGLSPSSVTSDCWVDPQPQA*SSWLVF Trigger: GAAGACCAGCCAGGAACTCAAAGCCTGAGGCTGGGG...ATCTACCCAGCAGTCGGATGTGACGGAGGATGGTGAGAGCCCTGAAGATCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTCGGGCGTTGCCTGAGGCTACCCAGAGTCTCAGGGGCAAGGGCAGATGCTTACATCTGGATGCGCTaGCTGTGGATCTCAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: QVGRCLRLPRVSGARADAYIWMR*LWISII Trigger: AATTATTGAGATCCACAGCAAGCGCATCCAGATGTA...AGCATCTGCCCTTGCCCCTGAGACTCTGGGTAGCCTCAGGCAACGCCCGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159653.2 |
||
| CDS TCA 90 bp | TGGCTGTCCATACATCAGTACCCGATCACGTCCACTCTTAGCCAGTaGGACATTGGCAACAGGGAAAGAGCAGAGAGAGGCGGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLSIHQYPITSTLSQ*DIGNRERAERGGGG Trigger: TCCTCCACCGCCTCTCTCTGCTCTTTCCCTGTTGCCAATGTCTCACTGGCTAAGAGTGGACGTGATCGGGTACTGATGTATGGACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CCA 90 bp | TCAGGCTTTGAGTTCCTGGCTGGTCTTCCACAGGGACGATACCCTTaGCCATGGGATAGGGCAGCTGAAGGTTCCTCGTCTTTGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGFEFLAGLPQGRYP*PWDRAAEGSSSLSD Trigger: ATCAGACAAAGACGAGGAACCTTCAGCTGCCCTATCCCATGGCCAAGGGTATCGTCCCTGTGGAAGACCAGCCAGGAACTCAAAGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCGCAGAGGTAGGTGGGTaGGCCTCTGTCAGCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQGKRCMMGKRWNVRNSPAEVGG*ASVSKA Trigger: AGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGC...GGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACAGCTGGCCCTCTGTTCCTGAGGGATCTTCAGGGCTCTCACCATCCTCCTCTTTGTCTGATCCTTaGATCTGGTCTCTGCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSWPSVPEGSSGLSPSSSLSDP*IWSLHV Trigger: GACATGCAGAGACCAGATCAAAGGATCAGACAAAGA...GGAGGATGGTGAGAGCCCTGAAGATCCCTCAGGAACAGAGGGCCAGCTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGTGAAGTGGGCATGGATCCGGAGGTAGGCTCCATACATCTGGATGCGCTTGAAGGTTCCTCGTCTTaGTCTGATCCTTTGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSEVGMDPEVGSIHLDALEGSSS*SDPLIW Trigger: CCAGATCAAAGGATCAGACAAAGACGAGGAACCTTC...AAGCGCATCCAGATGTATGGAGCCTACCTCCGGATCCATGCCCACTTCACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATCCCCAGCCTCAGGCTTaGAGTTCCTGGCTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LREQGKRCMMGKRWNVRNPQPQA*SSWLVF Trigger: GAAGACCAGCCAGGAACTCAAAGCCTGAGGCTGGGG...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS TCA 90 bp | CCAAGTCTTGATTCACAGGGGATTCGGGCAGTTCAAGCTCTAAGGTaGCTCGATATGGCTGTCCATACATCAGTACCCGATCACGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSLDSQGIRAVQALR*LDMAVHTSVPDHVH Trigger: GTGGACGTGATCGGGTACTGATGTATGGACAGCCATATCGAGTCACCTTAGAGCTTGAACTGCCCGAATCCCCTGTGAATCAAGACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTTCAGGAACTGGAGCAGGAACATGCCCAAGTCTaGATTCACAGGGGATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: MGKRWNVRNSPFVQELEQEHAQV*IHRGFG Trigger: CCCGAATCCCCTGTGAATCAAGACTTGGGCATGTTC...CTGCTCCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160897.8 |
||
| CDS TCA 90 bp | CATGGGATAGGGCAGCTGAAGGTTCCTCGTCTTTGTCTGATCCTTTaGTCTGGTCTCTGCATGTCTCTCTTGCCCCAGCTTCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HGIGQLKVPRLCLIL*SGLCMSLLPQLLFF Trigger: AAAGAAGAGAAGCTGGGGCAAGAGAGACATGCAGAGACCAGATCAAAGGATCAGACAAAGACGAGGAACCTTCAGCTGCCCTATCCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCAGAACATGCCCAAGTCTaGATTCACAGGGGATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: REQGKRCMMGKRWNVRNSEHAQV*IHRGFG Trigger: CCCGAATCCCCTGTGAATCAAGACTTGGGCATGTTC...TGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAAGAACATGCCCAAGTCTaGATTCACAGGGGATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IKGAREKVYDGKALECEEEHAQV*IHRGFG Trigger: CCCGAATCCCCTGTGAATCAAGACTTGGGCATGTTC...TTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | CCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCGCAGAGGTAGGTGGGTaGGCCTCTGTCAGCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQNSLLREQGKRCMMGKRAEVGG*ASVSKA Trigger: AGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGC...GCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGGCAGAGGTAGGTGGGTaGGCCTCTGTCAGCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNSLLREQGKRCMMGKRWAEVGG*ASVSKA Trigger: AGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGC...CCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAACATGCCCAAGTCTaGATTCACAGGGGATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIKGAREKVYDGKALECEEHAQV*IHRGFG Trigger: CCCGAATCCCCTGTGAATCAAGACTTGGGCATGTTC...CTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGCAGAGGTAGGTGGGTaGGCCTCTGTCAGCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLLREQGKRCMMGKRWNAEVGG*ASVSKA Trigger: AGCTTTGCTGACAGAGGCCAACCCACCTACCTCTGC...ATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGGGGACTGGTGGGTCATaGACCATGATGGGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPQNSLLREQGKRCMMGKGTGGS*TMMGTA Trigger: TGCTGTCCCCATCATGGTCAATGACCCACCAGTCCC...CTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | CACAAGCAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGGAACATGCCCAAGTCTaGATTCACAGGGGATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HKQLPQNSLLREQGKRCMEHAQV*IHRGFG Trigger: CCCGAATCCCCTGTGAATCAAGACTTGGGCATGTTC...CATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTGCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTACATCTGGATGCGCTaGCTGTGGATCTCAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: AREKVYDGKALECEEFTLYIWMR*LWISII Trigger: AATTATTGAGATCCACAGCAAGCGCATCCAGATGTA...AAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTCACCCTTTGTTCTTTGTCTGATCCTTaGATCTGGTCTCTGCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: REKVYDGKALECEEFTLCSLSDP*IWSLHV Trigger: GACATGCAGAGACCAGATCAAAGGATCAGACAAAGA...ACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGAGGAATTACATCTGGATGCGCTaGCTGTGGATCTCAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: LREQGKRCMMGKRWNVRNYIWMR*LWISII Trigger: AATTATTGAGATCCACAGCAAGCGCATCCAGATGTA...ATTCCTCACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | CACAAGCAGCTGCCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGGAAGGTTCCTCGTCTTaGTCTGATCCTTTGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HKQLPQNSLLREQGKRCMEGSSS*SDPLIW Trigger: CCAGATCAAAGGATCAGACAAAGACGAGGAACCTTC...CATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGGCAGCTGCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTGGAATGTGTACATCTGGATGCGCTaGCTGTGGATCTCAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: SLLREQGKRCMMGKRWNVYIWMR*LWISII Trigger: AATTATTGAGATCCACAGCAAGCGCATCCAGATGTA...CACATTCCAGCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS-3UTR CAA 90 bp | CCACAAAATAGTTTATTAAGGGAGCAAGGGAAAAGGTGTATGATGGGAAAGCGCTACATCTGGATGCGCTaGCTGTGGATCTCAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: PQNSLLREQGKRCMMGKRYIWMR*LWISII Trigger: AATTATTGAGATCCACAGCAAGCGCATCCAGATGTA...GCGCTTTCCCATCATACACCTTTTCCCTTGCTCCCTTAATAAACTATTTTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS CCA 72 bp | CTGCGGGCACGGCCTGCCAAGACGTGGCCCACTTCCTaGGCCCACAGTAAGGCGGGGACTGGTGGGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LRARPAKTWPTS*AHSKAGTGGSL Trigger: CAATGACCCACCAGTCCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CCA 72 bp | TGCAGCATCAGCCTGCGGGCACGGCCTGCCAAGACGTaGCCCACTTCCTGGGCCCACAGTAAGGCGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: CSISLRARPAKT*PTSWAHSKAGT Trigger: AGTCCCCGCCTTACTGTGGGCCCAGGAAGTGGGCCACGTCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS GCA 72 bp | AGCAAAAGAAGGATGGTGCAGAAGAGCACCCCAAACTaGAGCATCAGCCTGCGGGCACGGCCTGCCAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: SKRRMVQKSTPN*SISLRARPAKT Trigger: CGTCTTGGCAGGCCGTGCCCGCAGGCTGATGCTGCAGTTTGGGGTGCTCTTCTGCACCATCCTTCTTTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CCA 72 bp | GCTGCTTCTGTTCAGCGAAGCCAAACAGCAGGAGGCTaGAGAACAGCAGCGTGTCGAGCACCTGGAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AASVQRSQTAGG*RTAACRAPGAA Trigger: AGCTGCTCCAGGTGCTCGACACGCTGCTGTTCTCCAGCCTCCTGCTGTTTGGCTTCGCTGAACAGAAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000159653.2 ENSMUST00000160556.8 ENSMUST00000171649.8 |
||
| CDS TCA 72 bp | GGGCAGCTGAAGGTTCCTCGTCTTTGTCTGATCCTTTaGTCTGGTCTCTGCATGTCTCTCTTGCCCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GQLKVPRLCLIL*SGLCMSLLPQL Trigger: AAGCTGGGGCAAGAGAGACATGCAGAGACCAGATCAAAGGATCAGACAAAGACGAGGAACCTTCAGCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CCA 72 bp | AGACATTGGCAACAGGGAAAGAGCAGAGAGAGGCGGTaGAGGAATCACAGTCTGTCCTGTAGTGGAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHWQQGKSRERR*RNHSLSCSGSA Trigger: TGCACTTCCACTACAGGACAGACTGTGATTCCTCCACCGCCTCTCTCTGCTCTTTCCCTGTTGCCAATGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CAA 72 bp | AGGGCAGCTGAAGGTTCCTCGTCTTTGTCTGATCCTTaGATCTGGTCTCTGCATGTCTCTCTTGCCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAAEGSSSLSDP*IWSLHVSLAPA Trigger: AGCTGGGGCAAGAGAGACATGCAGAGACCAGATCAAAGGATCAGACAAAGACGAGGAACCTTCAGCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS CAA 90 bp | CCATGGGATAGGGCAGCTGAAGGTTCCTCGTCTTTGTCTGATCCTTaGATCTGGTCTCTGCATGTCTCTCTTGCCCCAGCTTCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PWDRAAEGSSSLSDP*IWSLHVSLAPASLL Trigger: AAGAAGAGAAGCTGGGGCAAGAGAGACATGCAGAGACCAGATCAAAGGATCAGACAAAGACGAGGAACCTTCAGCTGCCCTATCCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160897.8 ENSMUST00000171649.8 |
||
| CDS TCA 72 bp | GATTCACAGGGGATTCGGGCAGTTCAAGCTCTAAGGTaGCTCGATATGGCTGTCCATACATCAGTACCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: DSQGIRAVQALR*LDMAVHTSVPD Trigger: ATCGGGTACTGATGTATGGACAGCCATATCGAGTCACCTTAGAGCTTGAACTGCCCGAATCCCCTGTGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086058.13 ENSMUST00000159634.8 ENSMUST00000160556.8 ENSMUST00000160897.8 ENSMUST00000171649.8 |
||