Pregenerated sensors for BRSK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035390Ensembl transcript IDs: ENSMUST00000048248.9, ENSMUST00000120836.8, ENSMUST00000123637.2, ENSMUST00000205666.2, ENSMUST00000206024.2
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCAGGGGAGACCTCAGCAAGACACTGGCCAAAAGTCCAAGAAGTaGGTCAGCTTAAGAGAAGCAGAGAGACACCTGAGATTGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: VQGRPQQDTGQKSKK*VSLREAERHLRLHW Trigger: CCAGTGCAATCTCAGGTGTCTCTCTGCTTCTCTTAAGCTGACTCACTTCTTGGACTTTTGGCCAGTGTCTTGCTGAGGTCTCCCCTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAATTGGGTATGGCCCCTaGAGCCCTATCCCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPIGYGP*SPIPAG Trigger: CCCTGCAGGGATAGGGCTCCAGGGGCCATACCCAAT...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGCTGGAGCCCTATCCCTaGAGGGCAAGGCCTAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: VVVAAAGGIRHRRRQDHALEPYP*RARPSF Trigger: AAAACTAGGCCTTGCCCTGCAGGGATAGGGCTCCAG...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGATCTGGCTCCAGAGCTCTGTGGCACCATTGCTTCCAACGTGGGGGCCCACCTGAGATTGCACTaGTCACCCTGGATGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RADLAPELCGTIASNVGAHLRLH*SPWMCA Trigger: GGCACACATCCAGGGTGACCAGTGCAATCTCAGGTG...GGCCCCCACGTTGGAAGCAATGGTGCCACAGAGCTCTGGAGCCAGATCTGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR-3UTR CCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTAATTGGGTATGGCCCCTaGAGCCCTATCCCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: DAGRITRNQNSFREGKSVIGYGP*SPIPAG Trigger: CCCTGCAGGGATAGGGCTCCAGGGGCCATACCCAAT...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCTGGAGCCCTATCCCTaGAGGGCAAGGCCTAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: TRIPSGRANPYRRSQGRGLEPYP*RARPSF Trigger: AAAACTAGGCCTTGCCCTGCAGGGATAGGGCTCCAG...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCTATCTCCCCTGGCTTTAGCCCCTAGTTCCAGGCACACTGGGATGACTCCCACAGGGCAGATCTaGCTCCAGAGCTCTGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SVLSPLALAPSSRHTGMTPTGQI*LQSSVA Trigger: TGCCACAGAGCTCTGGAGCCAGATCTGCCCTGTGGG...AGTCATCCCAGTGTGCCTGGAACTAGGGGCTAAAGCCAGGGGAGATAGGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR-3UTR CCA 90 bp | CTATCTCCCCTGGCTTTAGCCCCTAGTTCCAGGCACACTGGGATGACTGATCACTTGCACTGGTCACCCTaGATGTGTGCCCACCACACA | + |
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Preference number: 2 (lower is better) Translates to: LSPLALAPSSRHTGMTDHLHWSP*MCAHHT Trigger: TGTGTGGTGGGCACACATCCAGGGTGACCAGTGCAA...GTGATCAGTCATCCCAGTGTGCCTGGAACTAGGGGCTAAAGCCAGGGGAGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR CCA 72 bp | ACTCTCCCACAGGGCAGATCTGGCTCCAGAGCTCTGTaGCACCATTGCTTCCAACGTGGGGGCCACTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: TLPQGRSGSRAL*HHCFQRGGHCC Trigger: ACAACAGTGGCCCCCACGTTGGAAGCAATGGTGCCACAGAGCTCTGGAGCCAGATCTGCCCTGTGGGAGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR GCA 72 bp | CAGGGCAGATCTGGCTCCAGAGCTCTGTGGCACCATTaGTTCCAACGTGGGGGCCACTGTTGTTTTAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: QGRSGSRALWHH*FQRGGHCCFRA Trigger: AGCCCTAAAACAACAGTGGCCCCCACGTTGGAAGCAATGGTGCCACAGAGCTCTGGAGCCAGATCTGCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR TCA 72 bp | GTGGGGGCCACTGTTGTTTTAGGGCTTTCAGGTAGCTaGGAAACTCCTTTCTTGGACTCCAGCCTCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VGATVVLGLSGS*ETPFLDSSLLG Trigger: CCCCAAGAGGCTGGAGTCCAAGAAAGGAGTTTCTCAGCTACCTGAAAGCCCTAAAACAACAGTGGCCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR GCA 72 bp | GAACTGTGCTTTTCAATGCCAGTAGCATTTGGGTCCTaGAGAGAGGGCCACCAATCTGTCCTATCTCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: ELCFSMPVAFGS*REGHQSVLSPL Trigger: CAGGGGAGATAGGACAGATTGGTGGCCCTCTCTGCAGGACCCAAATGCTACTGGCATTGAAAAGCACAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR CCA 72 bp | GTAGCTGAGAAACTCCTTTCTTGGACTCCAGCCTCTTaGGGGAAATCTATTCCCAACAGTGCAGGGGAGACC | + |
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Preference number: 3 (lower is better) Translates to: VAEKLLSWTPAS*GKSIPNSAGET Trigger: GGTCTCCCCTGCACTGTTGGGAATAGATTTCCCCCAAGAGGCTGGAGTCCAAGAAAGGAGTTTCTCAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGCTCCCAACATACTCCTaGGGCCTTATATACAGATTC | + |
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Preference number: 3 (lower is better) Translates to: LLLLLLLPPAESDTDAGRLPTYS*GLIYRF Trigger: GAATCTGTATATAAGGCCCAAGGAGTATGTTGGGAG...CCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGGATGCCATTTGAGAACTGTGCTTTTCAATGCCAGTAGCATTTGGGTCCTGGAGAGACACCTGAGATaGCACTGGTCACCCTGGATG | + |
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Preference number: 3 (lower is better) Translates to: PGCHLRTVLFNASSIWVLERHLR*HWSPWM Trigger: CATCCAGGGTGACCAGTGCAATCTCAGGTGTCTCTC...CAGGACCCAAATGCTACTGGCATTGAAAAGCACAGTTCTCAAATGGCATCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR GCA 72 bp | ACCAGCACTAAAGTTTGTCAGATCCATAAAACTGGATaGGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGC | + |
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Preference number: 3 (lower is better) Translates to: TSTKVCQIHKTG*GTPPSGFLGNC Trigger: GCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGATCTGACAAACTTTAGTGCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| 3UTR-3UTR CAA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGCTCCCAACATACTCCTaGGGCCTTATATACAGATTC | + |
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Preference number: 3 (lower is better) Translates to: SRETRIPSGRANPYRRSQLPTYS*GLIYRF Trigger: GAATCTGTATATAAGGCCCAAGGAGTATGTTGGGAG...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| 3UTR CCA 72 bp | ATTCCCAACAGTGCAGGGGAGACCTCAGCAAGACACTaGCCAAAAGTCCAAGAAGTGAGTCAGCTTAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: IPNSAGETSARH*PKVQEVSQLKR Trigger: TCTCTTAAGCTGACTCACTTCTTGGACTTTTGGCCAGTGTCTTGCTGAGGTCTCCCCTGCACTGTTGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR TCA 72 bp | AGACCTCAGCAAGACACTGGCCAAAAGTCCAAGAAGTaGGTCAGCTTAAGAGAAGCAGAGAGACACCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: RPQQDTGQKSKK*VSLREAERHLR Trigger: TCTCAGGTGTCTCTCTGCTTCTCTTAAGCTGACTCACTTCTTGGACTTTTGGCCAGTGTCTTGCTGAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR CCA 72 bp | CATTTGAGAACTGTGCTTTTCAATGCCAGTAGCATTTaGGTCCTGCAGAGAGGGCCACCAATCTGTCCTATC | + |
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Preference number: 3 (lower is better) Translates to: HLRTVLFNASSI*VLQRGPPICPI Trigger: GATAGGACAGATTGGTGGCCCTCTCTGCAGGACCCAAATGCTACTGGCATTGAAAAGCACAGTTCTCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
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| 3UTR GCA 72 bp | TGCTTTCTTTCTCTGAGCATTTCCAGATTATTCCCGTaGACCAGCACTAAAGTTTGTCAGATCCATAAAACT | + |
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Preference number: 3 (lower is better) Translates to: CFLSLSISRLFP*TSTKVCQIHKT Trigger: AGTTTTATGGATCTGACAAACTTTAGTGCTGGTGCACGGGAATAATCTGGAAATGCTCAGAGAAAGAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS-3UTR CCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTCCCGACGCCACCGCCTaGGCTGGGAGGTGGCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPPDATA*AGRWRR Trigger: ACGACGCCACCTCCCAGCCCAGGCGGTGGCGTCGGG...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTGGAGCGCGGGGAGCCTaGTGGTCCAGGCAAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPGARGA*WSRQGR Trigger: ACGCCCTTGCCTGGACCACCAGGCTCCCCGCGCTCC...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCACCCGACGCCACCGCCTaGGCTGGGAGGTGGCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPPDATA*AGRWRR Trigger: ACGACGCCACCTCCCAGCCCAGGCGGTGGCGTCGGG...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTTCTGCGGCCTGGGGCTaGCTCCAGGCAAGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPSAAWG*LQARVW Trigger: CCAGACCCTTGCCTGGAGCCAGCCCCAGGCCGCAGA...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGCCTGGGCTGGGAGGTaGCGTCGTTCCTGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPAWAGR*RRSWGP Trigger: GGGACCCCAGGAACGACGCCACCTCCCAGCCCAGGC...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR TCA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCAGGCGTGTGCAGAGGTaGGTGCAAGGGGGTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GLGMTQRQRALSGSAKPPRRVQR*VQGGSA Trigger: GGCGGAACCCCCTTGCACTCACCTCTGCACACGCCT...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR GCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTCCGGACTCCTTGGGCTaGTCAGAGGGCTGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPPDSLG*SEGWRT Trigger: TGTCCTCCAGCCCTCTGAGCAGCCCAAGGAGTCCGG...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGGGAGCGCGGGGAGCCTaGTGGTCCAGGCAAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPGARGA*WSRQGR Trigger: ACGCCCTTGCCTGGACCACCAGGCTCCCCGCGCTCC...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCAAGCGGACAGGCTTCTaGAAGACGGAGGGGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: GLGMTQRQRALSGSAKPPKRTGF*KTEGPP Trigger: CGGCGGCCCCTCCGTCTTCCAGAAGCCTGTCCGCTT...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR TCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTAGCGCCTGGCTCCGGTaGGAAGGAAAAGACCGGACT | + |
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Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPSAWLR*EGKDRT Trigger: AGTCCGGTCTTTTCCTTCTCACCGGAGCCAGGCGCT...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR GCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGCCGGACTCCTTGGGCTaGTCAGAGGGCTGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: VVVAAAGGIRHRRRQDHAPDSLG*SEGWRT Trigger: TGTCCTCCAGCCCTCTGAGCAGCCCAAGGAGTCCGG...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR GCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGGTGTGCAGAGGTGAGTaGAAGGGGGTTCCGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: VVVAAAGGIRHRRRQDHAVCRGE*KGVPPE Trigger: CTCCGGCGGAACCCCCTTGCACTCACCTCTGCACAC...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTCTCCAGGCAAGGGTCTaGTTCGTGTTTCCCGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPLQARV*FVFPAQ Trigger: CTGGGCGGGAAACACGAACCAGACCCTTGCCTGGAG...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGGGCTACTCTGCGGCCTaGGGCTGGCTCCAGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TRIPSGRANPYRRSQGRGGYSAA*GWLQAR Trigger: CCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCC...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | ACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCGGCTACTCTGCGGCCTaGGGCTGGCTCCAGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TGCGTPPSGFLGNCHNPFGYSAA*GWLQAR Trigger: CCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCC...GAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS-3UTR CCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTAGCCTGGGCTGGGAGGTaGCGTCGTTCCTGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVAWAGR*RRSWGP Trigger: GGGACCCCAGGAACGACGCCACCTCCCAGCCCAGGC...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGTGCATCTTGCGCCGGTaGAAGCGAGGGGAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRCILRR*KRGEPR Trigger: CCTGGGCTCCCCTCGCTTCCACCGGCGCAAGATGCA...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGAAGCGGACAGGCTTCTaGAAGACGGAGGGGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRKRTGF*KTEGPP Trigger: CGGCGGCCCCTCCGTCTTCCAGAAGCCTGTCCGCTT...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTCCAGCAGGCCGGGTCTaGGCTCCGTTCTTCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPPAGRV*APFFSS Trigger: AGATGAGAAGAACGGAGCCCAGACCCGGCCTGCTGG...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGAGGGTCAGAGCGGCCTaGTGGGGGCTGCAGGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPRVRAA*WGLQAS Trigger: CGAAGCCTGCAGCCCCCACCAGGCCGCTCTGACCCT...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR TCA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGCAGTGGAGGCTCCACTaGCGCTGCGGGATCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRQWRLH*RCGISD Trigger: GTCAGAGATCCCGCAGCGTCAGTGGAGCCTCCACTG...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR TCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGTGTTGCGGATGGAGTTaGGCCGACTTCTCCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VVVAAAGGIRHRRRQDHACCGWS*ADFSRR Trigger: CCGCCTGGAGAAGTCGGCTCAACTCCATCCGCAACA...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR TCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCATCTCTACCACACGTTTaGACCGACGGCTGGGACCGG | + |
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Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPSLPHV*TDGWDR Trigger: CCGGTCCCAGCCGTCGGTTCAAACGTGTGGTAGAGA...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR GCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCACCCACATATTGGGCGTaGTGGGGTGGGTGTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPPTYWA*WGGCGC Trigger: ACACCCACACCCACCCCAGCACGCCCAATATGTGGG...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
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| CDS-3UTR GCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCACTTCGCAGTTCTCTGTaGAGCCGCTCGCGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPLRSSL*SRSRSL Trigger: CAGAGACCGCGAGCGGCTGCACAGAGAACTGCGAAG...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCTGCCACCTCCACTGCTaGCATCTCTTCGGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGMTQRQRALSGSAKPPCHLHC*HLFGVR Trigger: CCTCACCCCGAAGAGATGGCAGCAGTGGAGGTGGCA...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTAGTGCTGACACGATCTaGCGGAAGAACTTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPSADTI*RKNFRA Trigger: GGCCCGGAAGTTCTTCCGCCAGATCGTGTCAGCACT...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAAGGCTACTCTGCGGCCTaGGGCTGGCTCCAGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQGYSAA*GWLQAR Trigger: CCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCC...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCAGCAGGCCGGGTCTaGGCTCCGTTCTTCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGMTQRQRALSGSAKPPPAGRV*APFFSS Trigger: AGATGAGAAGAACGGAGCCCAGACCCGGCCTGCTGG...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCAGGGTCAGAGCGGCCTaGTGGGGGCTGCAGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HRRRQDHAKPEFLPGGQIRVRAA*WGLQAS Trigger: CGAAGCCTGCAGCCCCCACCAGGCCGCTCTGACCCT...GATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCACCCTGTTCACGATCTTaGCAGCGACCTTCTGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPPCSRS*QRPSDP Trigger: CGGGTCAGAAGGTCGCTGTCAAGATCGTGAACAGGG...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
||
| CDS-3UTR TCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAGACGTCGTGGAGCTTaGGCACGTGCGGGTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVAAAGGIRHRRRQDHARRRGA*ARAGVQ Trigger: TTGAACACCCGCACGTGCTCAAGCTCCACGACGTCT...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAAGACGTCGTGGAGCTTaGGCACGTGCGGGTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPRRRGA*ARAGVQ Trigger: TTGAACACCCGCACGTGCTCAAGCTCCACGACGTCT...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTAAGGCGTGTGCAGAGGTaGGTGCAAGGGGGTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVRRVQR*VQGGSA Trigger: GGCGGAACCCCCTTGCACTCACCTCTGCACACGCCT...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGAGCTGATGTCCACCTaGAAGCGGACAGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPELMST*KRTGFW Trigger: CCAGAAGCCTGTCCGCTTTCAGGTGGACATCAGCTC...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTACAGCTCCACATGTCTaGCCGGCGGCCATCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPTAPHV*PAAIIL Trigger: AAGTATGATGGCCGCCGGGCAGACATGTGGAGCTGT...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACGCATGGCTACTCTaGGGCCTGGGGCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPYAWLL*GLGLAP Trigger: TGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTA...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAAGTGCTGACACGATCTaGCGGAAGAACTTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPSADTI*RKNFRA Trigger: GGCCCGGAAGTTCTTCCGCCAGATCGTGTCAGCACT...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACTCTGCGGCCTGGGGCTaGCTCCAGGCAAGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHSAAWG*LQARVW Trigger: CCAGACCCTTGCCTGGAGCCAGCCCCAGGCCGCAGA...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACCGTCTGGTAGGCACTaGGGAGCCACCACTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVPSGRH*GATTPS Trigger: GCTGGGAGTGGTGGCTCCCCAGTGCCTACCAGACGG...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | CACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCCGTCTGGTAGGCACTaGGGAGCCACCACTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRRRQDHAKPEFLPGGQIPSGRH*GATTPS Trigger: GCTGGGAGTGGTGGCTCCCCAGTGCCTACCAGACGG...GATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAAGACCGGACTCCTTaGGCTGCTCAGAGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVVAAAGGIRHRRRQDHAKDRTP*AAQRAG Trigger: TCCAGCCCTCTGAGCAGCCCAAGGAGTCCGGTCTTT...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGGCAGCGTCTGTGTTTTaGAAGTTGGGGAGCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VVVAAAGGIRHRRRQDHAAASVF*KLGSLR Trigger: GCGGAGGCTCCCCAACTTCCAAAACACAGACGCTGC...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGTGCATCTTGCGCCGGTaGAAGCGAGGGGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLPPAESDTDAGRCILRR*KRGEPR Trigger: CCTGGGCTCCCCTCGCTTCCACCGGCGCAAGATGCA...CCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTGCAGGGCAAATAGGATaGCTCCACAGCTCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPAGQIG*LHSSTC Trigger: ACATGTGGAGCTGTGGAGTCATCCTATTTGCCCTGC...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGACGCTGCGGGATCTCTaGCTGTGCTGGGCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLPPAESDTDAGRTLRDL*LCWAIS Trigger: GGAGATGGCCCAGCACAGTCAGAGATCCCGCAGCGT...CCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGTGGAGGCTCCACTaGCGCTGCGGGATCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVQWRLH*RCGISD Trigger: GTCAGAGATCCCGCAGCGTCAGTGGAGCCTCCACTG...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGGAGCTGATGTCCACCTaGAAGCGGACAGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRELMST*KRTGFW Trigger: CCAGAAGCCTGTCCGCTTTCAGGTGGACATCAGCTC...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGGTCATCGAAGGGCAGTaGCCCCACAAGCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRVIEGQ*PHKQGK Trigger: TTTGCCCTGCTTGTGGGGGCACTGCCCTTCGATGAC...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTTACGCATGGCTACTCTaGGGCCTGGGGCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NWMRHAPFRLSRELPQPIYAWLL*GLGLAP Trigger: TGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTA...AATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR GCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTAGTGTGCAGAGGTGAGTaGAAGGGGGTTCCGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVVCRGE*KGVPPE Trigger: CTCCGGCGGAACCCCCTTGCACTCACCTCTGCACAC...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGTCTGCGGCCTGGGGCTaGCTCCAGGCAAGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRETRIPSGRANPYRRSQSAAWG*LQARVW Trigger: CCAGACCCTTGCCTGGAGCCAGCCCCAGGCCGCAGA...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTGTAGAGGGGTTCCATTaGTGGCCAGGAGCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPVEGFH*WPGASC Trigger: ACAAGAAGCTCCTGGCCACCAATGGAACCCCTCTAC...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCCCCTGTTCACGATCTTaGCAGCGACCTTCTGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TGCGTPPSGFLGNCHNPFPCSRS*QRPSDP Trigger: CGGGTCAGAAGGTCGCTGTCAAGATCGTGAACAGGG...GAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGCGTGCGGGTGTTCAATaGGCTTCAGGATGGCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VVVAAAGGIRHRRRQDHARAGVQ*ASGWRF Trigger: AAATCGCCATCCTGAAGCTCATTGAACACCCGCACG...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCACGTGCGGGTGTTCAATaGGCTTCAGGATGGCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPRAGVQ*ASGWRF Trigger: AAATCGCCATCCTGAAGCTCATTGAACACCCGCACG...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGTCTGGAGGGATGAAGTaGGGCATGTGGAAGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRSGGMK*GMWKTP Trigger: TGGGGTCTTCCACATGCCTCACTTCATCCCTCCAGA...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCACGCTGCGGGATCTCTaGCTGTGCTGGGCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLPPAESDTDAGTLRDL*LCWAIS Trigger: GGAGATGGCCCAGCACAGTCAGAGATCCCGCAGCGT...GCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTAAGCGCCTGGCTCCGGTaGGAAGGAAAAGACCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVSAWLR*EGKDRT Trigger: AGTCCGGTCTTTTCCTTCTCACCGGAGCCAGGCGCT...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTATGTTGCGGATGGAGTTaGGCCGACTTCTCCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVCCGWS*ADFSRR Trigger: CCGCCTGGAGAAGTCGGCTCAACTCCATCCGCAACA...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCTGAAGCTGGTCTGTaGCAGTACACTGTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGMTQRQRALSGSAKPPPEAGL*QYTVTQ Trigger: CTGAGTCACAGTGTACTGTCACAGACCAGCTTCAGG...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCCTGAAGCTGGTCTGTaGCAGTACACTGTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GMTQRQRALSGSAKPPPSPEAGL*QYTVTQ Trigger: CTGAGTCACAGTGTACTGTCACAGACCAGCTTCAGG...GGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | CACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCTCTCTACCACACGTTTaGACCGACGGCTGGGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRRQDHAKPEFLPGGQISLPHV*TDGWDR Trigger: CCGGTCCCAGCCGTCGGTTCAAACGTGTGGTAGAGA...GATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | ATCACTCTCCCACAGGGCAGATCTGGCTCCAGAGCTCTGTGGCACCATTGCTTCTCTCTACCACACGTTTaGACCGACGGCTGGGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: ITLPQGRSGSRALWHHCFSLPHV*TDGWDR Trigger: CCGGTCCCAGCCGTCGGTTCAAACGTGTGGTAGAGA...GAAGCAATGGTGCCACAGAGCTCTGGAGCCAGATCTGCCCTGTGGGAGAGTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
||
| CDS-3UTR GCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAACCCACATATTGGGCGTaGTGGGGTGGGTGTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQPTYWA*WGGCGC Trigger: ACACCCACACCCACCCCAGCACGCCCAATATGTGGG...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206024.2 |
||
| CDS-3UTR GCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGGTCATCGAAGGGCAGTaGCCCCACAAGCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPVIEGQ*PHKQGK Trigger: TTTGCCCTGCTTGTGGGGGCACTGCCCTTCGATGAC...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCTACGCATGGCTACTCTaGGGCCTGGGGCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLPPAESDTDAGYAWLL*GLGLAP Trigger: TGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTA...GCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACTACGCATGGCTACTCTaGGGCCTGGGGCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHYAWLL*GLGLAP Trigger: TGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTA...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGCTTCGCAGTTCTCTGTaGAGCCGCTCGCGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLPPAESDTDAGRLRSSL*SRSRSL Trigger: CAGAGACCGCGAGCGGCTGCACAGAGAACTGCGAAG...CCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAACTTCGCAGTTCTCTGTaGAGCCGCTCGCGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQLRSSL*SRSRSL Trigger: CAGAGACCGCGAGCGGCTGCACAGAGAACTGCGAAG...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR GCA 90 bp | CACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCTGCCACCTCCACTGCTaGCATCTCTTCGGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRRRQDHAKPEFLPGGQICHLHC*HLFGVR Trigger: CCTCACCCCGAAGAGATGGCAGCAGTGGAGGTGGCA...GATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGTCCGTTCTTCTCATCTaGCAAGGCCTGCACGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRIPSGRANPYRRSQGRGSVLLI*QGLHGG Trigger: CCCTCCGTGCAGGCCTTGGCAGATGAGAAGAACGGA...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGCTCCAGGCAAGGGTCTaGTTCGTGTTTCCCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGIRHRRRQDHAKPEFLPLQARV*FVFPAQ Trigger: CTGGGCGGGAAACACGAACCAGACCCTTGCCTGGAG...CGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCTCCAGGCAAGGGTCTaGTTCGTGTTTCCCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NWMRHAPFRLSRELPQPILQARV*FVFPAQ Trigger: CTGGGCGGGAAACACGAACCAGACCCTTGCCTGGAG...AATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGCGAGGAGGCAGGTCCTaGTCTTCACAGCTAGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRRGGRS*SSQLGY Trigger: GTATCCTAGCTGTGAAGACCAGGACCTGCCTCCTCG...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCCGACCTTCTGACCCGTaGTGCAGTGGACTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGCGTPPSGFLGNCHNPFRPSDP*CSGLQV Trigger: AACTTGGAGTCCACTGCATCACGGGTCAGAAGGTCG...GAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTTGACAGCGACCTTCTaGCCCGTGATGCAGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPLTATF*PVMQWT Trigger: AGTCCACTGCATCACGGGTCAGAAGGTCGCTGTCAA...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAAAGACGTCGTGGAGCTTaGGCACGTGCGGGTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQRRRGA*ARAGVQ Trigger: TTGAACACCCGCACGTGCTCAAGCTCCACGACGTCT...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGGCAGAAGTCCAGTGCTaGCACGATCTGGCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRIPSGRANPYRRSQGRGAEVQC*HDLAEE Trigger: TTCTTCCGCCAGATCGTGTCAGCACTGGACTTCTGC...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCACATACTTTTCCCCCTTaGTCACCTCTGGACATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPHTFPP*SPLDMR Trigger: ACGCATGTCCAGAGGTGATCAAGGGGGAAAAGTATG...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCTCTGGAGGGATGAAGTaGGGCATGTGGAAGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGCGTPPSGFLGNCHNPFSGGMK*GMWKTP Trigger: TGGGGTCTTCCACATGCCTCACTTCATCCCTCCAGA...GAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | GGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTTTGTCCAAGGAGATaGAATTCCCGAACCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMTQRQRALSGSAKPPPSLCPRR*NSRTRS Trigger: GCTCCTGGTTCGGGAATTTCATCTCCTTGGACAAAG...GGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTGTCATCGAAGGGCAGTaGCCCCACAAGCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NWMRHAPFRLSRELPQPIVIEGQ*PHKQGK Trigger: TTTGCCCTGCTTGTGGGGGCACTGCCCTTCGATGAC...AATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR GCA 90 bp | GGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGTCCGTTCTTCTCATCTaGCAAGGCCTGCACGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGIRHRRRQDHAKPEFLPSVLLI*QGLHGG Trigger: CCCTCCGTGCAGGCCTTGGCAGATGAGAAGAACGGA...CGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAAAGTGCTGACACGATCTaGCGGAAGAACTTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQSADTI*RKNFRA Trigger: GGCCCGGAAGTTCTTCCGCCAGATCGTGTCAGCACT...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACCTCCAGGCAAGGGTCTaGTTCGTGTTTCCCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHLQARV*FVFPAQ Trigger: CTGGGCGGGAAACACGAACCAGACCCTTGCCTGGAG...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGCGAGGAGGCAGGTCCTaGTCTTCACAGCTAGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPRGGRS*SSQLGY Trigger: GTATCCTAGCTGTGAAGACCAGGACCTGCCTCCTCG...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGGAGGGGTTCCATTGGTaGCCAGGAGCTTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPEGFHW*PGASCP Trigger: AGGACAAGAAGCTCCTGGCCACCAATGGAACCCCTC...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAACGACCTTCTGACCCGTaGTGCAGTGGACTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQRPSDP*CSGLQV Trigger: AACTTGGAGTCCACTGCATCACGGGTCAGAAGGTCG...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | AACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTTTGACAGCGACCTTCTaGCCCGTGATGCAGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NWMRHAPFRLSRELPQPILTATF*PVMQWT Trigger: AGTCCACTGCATCACGGGTCAGAAGGTCGCTGTCAA...AATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACCCCTGTTCACGATCTTaGCAGCGACCTTCTGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHPCSRS*QRPSDP Trigger: CGGGTCAGAAGGTCGCTGTCAAGATCGTGAACAGGG...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAGACGTCGTGGAGCTTaGGCACGTGCGGGTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHRRRGA*ARAGVQ Trigger: TTGAACACCCGCACGTGCTCAAGCTCCACGACGTCT...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | CACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCGCAGAAGTCCAGTGCTaGCACGATCTGGCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRRRQDHAKPEFLPGGQIAEVQC*HDLAEE Trigger: TTCTTCCGCCAGATCGTGTCAGCACTGGACTTCTGC...GATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAAGCAGAAGTCCAGTGCTaGCACGATCTGGCGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQAEVQC*HDLAEE Trigger: TTCTTCCGCCAGATCGTGTCAGCACTGGACTTCTGC...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAATCTGGAGGGATGAAGTaGGGCATGTGGAAGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQSGGMK*GMWKTP Trigger: TGGGGTCTTCCACATGCCTCACTTCATCCCTCCAGA...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCCTTGTATTCGGCCCTaGAGCTGGTCTGTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRIPSGRANPYRRSQGRGPCIRP*SWSVTV Trigger: TACTGTCACAGACCAGCTTCAGGGCCGAATACAAGG...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTACAGCTCCACATGTCTaGCCGGCGGCCATCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: NWMRHAPFRLSRELPQPITAPHV*PAAIIL Trigger: AAGTATGATGGCCGCCGGGCAGACATGTGGAGCTGT...AATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR GCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACGTCATCGAAGGGCAGTaGCCCCACAAGCAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHVIEGQ*PHKQGK Trigger: TTTGCCCTGCTTGTGGGGGCACTGCCCTTCGATGAC...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGCTGTGTTTTGGAAGTTaGGGAGCCTCCGCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGIRHRRRQDHAKPEFLPLCFGS*GASASS Trigger: GCTAGAGGCGGAGGCTCCCCAACTTCCAAAACACAG...CGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGCACTGTGACTCAGGCTaGGGATCGACAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPHCDSG*GSTERH Trigger: ATGCCTTTCTGTCGATCCCCAGCCTGAGTCACAGTG...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGGAGGGGTTCCATTGGTaGCCAGGAGCTTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLPPAESDTDAGREGFHW*PGASCP Trigger: AGGACAAGAAGCTCCTGGCCACCAATGGAACCCCTC...CCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTAGCAGGGCAAATAGGATaGCTCCACAGCTCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVAGQIG*LHSSTC Trigger: ACATGTGGAGCTGTGGAGTCATCCTATTTGCCCTGC...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAAGCAGGGCAAATAGGATaGCTCCACAGCTCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQAGQIG*LHSSTC Trigger: ACATGTGGAGCTGTGGAGTCATCCTATTTGCCCTGC...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | GGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCTACCAAGGATGTTTCTaGATTTGCTCCAGACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMTQRQRALSGSAKPPPSYQGCF*ICSRLS Trigger: GCTCAGTCTGGAGCAAATTCAGAAACATCCTTGGTA...GGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGCTTTGTCCAAGGAGATaGAATTCCCGAACCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPLCPRR*NSRTRS Trigger: GCTCCTGGTTCGGGAATTTCATCTCCTTGGACAAAG...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | CAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGGAGAGTAAAGGTGACTaGGTAGATGCCACCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QTQAGSRETRIPSGRANPESKGD*VDATST Trigger: AGTGGAGGTGGCATCTACTCAGTCACCTTTACTCTC...CGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGCTGTGTTTTGGAAGTTaGGGAGCCTCCGCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETRIPSGRANPYRRSQGRLCFGS*GASASS Trigger: GCTAGAGGCGGAGGCTCCCCAACTTCCAAAACACAG...CCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGCAGCGTCTGTGTTTTaGAAGTTGGGGAGCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRETRIPSGRANPYRRSQAASVF*KLGSLR Trigger: GCGGAGGCTCCCCAACTTCCAAAACACAGACGCTGC...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCATCGACAGAAAGGCATaGACAATGTCCGCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GMTQRQRALSGSAKPPPSIDRKA*TMSALM Trigger: CATCAAAGCGGACATTGTCCATGCCTTTCTGTCGAT...GGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTAGTAGAGGGGTTCCATTaGTGGCCAGGAGCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVVEGFH*WPGASC Trigger: ACAAGAAGCTCCTGGCCACCAATGGAACCCCTCTAC...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGCGACCTTCTGACCCGTaGTGCAGTGGACTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRETRIPSGRANPYRRSQRPSDP*CSGLQV Trigger: AACTTGGAGTCCACTGCATCACGGGTCAGAAGGTCG...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
||
| CDS-3UTR TCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACCGTGCGGGTGTTCAATaGGCTTCAGGATGGCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHRAGVQ*ASGWRF Trigger: AAATCGCCATCCTGAAGCTCATTGAACACCCGCACG...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACATACTTTTCCCCCTTaGTCACCTCTGGACATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVHTFPP*SPLDMR Trigger: ACGCATGTCCAGAGGTGATCAAGGGGGAAAAGTATG...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | AACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCATACTTTTCCCCCTTaGTCACCTCTGGACATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NWMRHAPFRLSRELPQPIHTFPP*SPLDMR Trigger: ACGCATGTCCAGAGGTGATCAAGGGGGAAAAGTATG...AATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACGCAGGGCAAATAGGATaGCTCCACAGCTCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHAGQIG*LHSSTC Trigger: ACATGTGGAGCTGTGGAGTCATCCTATTTGCCCTGC...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGTCTGGAGGGATGAAGTaGGGCATGTGGAAGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRETRIPSGRANPYRRSQSGGMK*GMWKTP Trigger: TGGGGTCTTCCACATGCCTCACTTCATCCCTCCAGA...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR GCA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGACAGCTCCACATGTCTaGCCGGCGGCCATCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRETRIPSGRANPYRRSQTAPHV*PAAIIL Trigger: AAGTATGATGGCCGCCGGGCAGACATGTGGAGCTGT...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTATTTATTTTTGTTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGAGGCTACTCTGCGGCCTaGGGCTGGCTCCAGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFIFVVVVVVAAAGGIRGYSAA*GWLQAR Trigger: CCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCC...TCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAACAAAAATAAATAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
||
| CDS-3UTR CCA 90 bp | GAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGCACTGTGACTCAGGCTaGGGATCGACAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETRIPSGRANPYRRSQGRHCDSG*GSTERH Trigger: ATGCCTTTCTGTCGATCCCCAGCCTGAGTCACAGTG...CCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGCCTTGTATTCGGCCCTaGAGCTGGTCTGTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRETRIPSGRANPYRRSQPCIRP*SWSVTV Trigger: TACTGTCACAGACCAGCTTCAGGGCCGAATACAAGG...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGAGTCTCTGTGACAGATaGAGTAGCTATGGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRIPSGRANPYRRSQGRGSLCDR*SSYGRS Trigger: ACTTCTGCCATAGCTACTCCATCTGTCACAGAGACT...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGATCGACAGAAAGGCATaGACAATGTCCGCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TRIPSGRANPYRRSQGRGIDRKA*TMSALM Trigger: CATCAAAGCGGACATTGTCCATGCCTTTCTGTCGAT...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTATACCAAGGATGTTTCTaGATTTGCTCCAGACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DAGRITRNQNSFREGKSVYQGCF*ICSRLS Trigger: GCTCAGTCTGGAGCAAATTCAGAAACATCCTTGGTA...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAATACCAAGGATGTTTCTaGATTTGCTCCAGACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WMRHAPFRLSRELPQPIQYQGCF*ICSRLS Trigger: GCTCAGTCTGGAGCAAATTCAGAAACATCCTTGGTA...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | AACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTTACCAAGGATGTTTCTaGATTTGCTCCAGACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NWMRHAPFRLSRELPQPIYQGCF*ICSRLS Trigger: GCTCAGTCTGGAGCAAATTCAGAAACATCCTTGGTA...AATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR TCA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGAGAGTAAAGGTGACTaGGTAGATGCCACCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRETRIPSGRANPYRRSQESKGD*VDATST Trigger: AGTGGAGGTGGCATCTACTCAGTCACCTTTACTCTC...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CCA 90 bp | GGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGAGTCTCTGTGACAGATaGAGTAGCTATGGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGIRHRRRQDHAKPEFLPSLCDR*SSYGRS Trigger: ACTTCTGCCATAGCTACTCCATCTGTCACAGAGACT...CGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS TCA 90 bp | TGGGGAGCCTCCGCCTCTAGCCTCATCTCCAGCGCCTGGCTCCGGTaGGAAGGAAAAGACCGGACTCCTTGGGCTGCTCAGAGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WGASASSLISSAWLR*EGKDRTPWAAQRAG Trigger: TCCAGCCCTCTGAGCAGCCCAAGGAGTCCGGTCTTTTCCTTCTCACCGGAGCCAGGCGCTGGAGATGAGGCTAGAGGCGGAGGCTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS GCA 90 bp | CAGGGTCCAGCTCGCCATTGGAAGGCAGGCTACGCATGGCTACTCTaGGGCCTGGGGCTGGCTCCAGGCAAGGGTCTGGTTCGTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGPARHWKAGYAWLL*GLGLAPGKGLVRVS Trigger: GGAAACACGAACCAGACCCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS CCA 90 bp | CCAGAACGTCAGGGTCCAGCTCGCCATTGGAAGGCAGGCTACGCATaGCTACTCTGCGGCCTGGGGCTGGCTCCAGGCAAGGGTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PERQGPARHWKAGYA*LLCGLGLAPGKGLV Trigger: AACCAGACCCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCCTGACGTTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGGGGCCGCCGCTGGCCTaGTATTCGGCCCTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRGPPLA*YSALKL Trigger: CAGCTTCAGGGCCGAATACAAGGCCAGCGGCGGCCC...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTGTGGCCAGGAGCTTCTaGTCCTTAGGGGGTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPVARSF*SLGGPR Trigger: CCGAGGACCCCCTAAGGACAAGAAGCTCCTGGCCAC...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS CCA 90 bp | CCAGAGACGCCATGCTTTCCAGAACGTCAGGGTCCAGCTCGCCATTaGAAGGCAGGCTACGCATGGCTACTCTGCGGCCTGGGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PETPCFPERQGPARH*KAGYAWLLCGLGLA Trigger: AGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCCTGACGTTCTGGAAAGCATGGCGTCTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCATAGGGGCCCACATATaGGGCGTGCTGGGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLGMTQRQRALSGSAKPPIGAHI*GVLGWV Trigger: CACCCACCCCAGCACGCCCAATATGTGGGCCCCTAT...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
||
| CDS-3UTR CAA 90 bp | GGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCGGGTCCAGCTCGCCATaGGAAGGCAGGCTACGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GMTQRQRALSGSAKPPPSGSSSP*EGRLRM Trigger: CATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCC...GGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTCCCCTCTGTTGCGGATGGAGTaGAGCCGACTTCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HRDRGPCPDLLSHPHPSPLLRME*SRLLQA Trigger: CGCCTGGAGAAGTCGGCTCAACTCCATCCGCAACAG...AGGGGAGGGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | GGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCTGTTGCGGATGGAGTaGAGCCGACTTCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GMTQRQRALSGSAKPPPSLLRME*SRLLQA Trigger: CGCCTGGAGAAGTCGGCTCAACTCCATCCGCAACAG...GGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | GGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGGCCGCCGCTGGCCTaGTATTCGGCCCTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGIRHRRRQDHAKPEFLPGPPLA*YSALKL Trigger: CAGCTTCAGGGCCGAATACAAGGCCAGCGGCGGCCC...CGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCGTCTCTACCACACGTTaGAACCGACGGCTGGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: GLGMTQRQRALSGSAKPPVSTTR*NRRLGP Trigger: CGGTCCCAGCCGTCGGTTCAAACGTGTGGTAGAGAC...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCGGGTCCAGCTCGCCATaGGAAGGCAGGCTACGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TGCGTPPSGFLGNCHNPFGSSSP*EGRLRM Trigger: CATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCC...GAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGGGCAGCGTCTGTGTTTaGGAAGTTGGGGAGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRGSVCV*EVGEPP Trigger: CGGAGGCTCCCCAACTTCCAAAACACAGACGCTGCC...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGGTAGAGGGGTTCCATaGGTGGCCAGGAGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAAAGGIRHRRRQDHAKPGRGVP*VARSFL Trigger: CAAGAAGCTCCTGGCCACCAATGGAACCCCTCTACC...TGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAAATAGGGGCCCACATATaGGGCGTGCTGGGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WMRHAPFRLSRELPQPIQIGAHI*GVLGWV Trigger: CACCCACCCCAGCACGCCCAATATGTGGGCCCCTAT...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206024.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGAGTAGCTGGCGCAGGTaGTCGTCATCGAAGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRSSWRR*SSSKGS Trigger: ACTGCCCTTCGATGACGACAACCTGCGCCAGCTACT...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | GGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCCCATCCCGAACCAGGAGCGTTTaGCCAGCTCAGGAGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GMTQRQRALSGSAKPPPSRTRSV*PAQERI Trigger: AATCCTCTCCTGAGCTGGCAAAACGCTCCTGGTTCG...GGATGGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGGTGGCCAGGAGCTTCTaGTCCTTAGGGGGTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLPPAESDTDAGRVARSF*SLGGPR Trigger: CCGAGGACCCCCTAAGGACAAGAAGCTCCTGGCCAC...CCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAGTAGCTGGCGCAGGTaGTCGTCATCGAAGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGCGTPPSGFLGNCHNPFSSWRR*SSSKGS Trigger: ACTGCCCTTCGATGACGACAACCTGCGCCAGCTACT...GAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CAA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACGGGTCCAGCTCGCCATaGGAAGGCAGGCTACGCATG | + |
|
Preference number: 5 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHGSSSP*EGRLRM Trigger: CATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCC...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CAA 90 bp | CACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCGTCTCTACCACACGTTaGAACCGACGGCTGGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: HRRRQDHAKPEFLPGGQIVSTTR*NRRLGP Trigger: CGGTCCCAGCCGTCGGTTCAAACGTGTGGTAGAGAC...GATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCCAGAGCTCTGTGGCACCATTGCTTCCAACGTGGGGGCCACTGTTGTTTGTCTCTACCACACGTTaGAACCGACGGCTGGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: WLQSSVAPLLPTWGPLLFVSTTR*NRRLGP Trigger: CGGTCCCAGCCGTCGGTTCAAACGTGTGGTAGAGAC...AAACAACAGTGGCCCCCACGTTGGAAGCAATGGTGCCACAGAGCTCTGGAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123637.2 |
||
| CDS-3UTR CAA 90 bp | GGGTTGGGGATGACACAGAGACAGAGGGCCCTGTCCGGATCTGCTAAGCCACCCTCATACTTTTCCCCCTaGATCACCTCTGGACATGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLGMTQRQRALSGSAKPPSYFSP*ITSGHA Trigger: CGCATGTCCAGAGGTGATCAAGGGGGAAAAGTATGA...GGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCTCTGTGTCATCCCCAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAAAGTAGCTGGCGCAGGTaGTCGTCATCGAAGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WMRHAPFRLSRELPQPIQSSWRR*SSSKGS Trigger: ACTGCCCTTCGATGACGACAACCTGCGCCAGCTACT...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCGGCAGCGTCTGTGTTTaGGAAGTTGGGGAGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLPPAESDTDAGGSVCV*EVGEPP Trigger: CGGAGGCTCCCCAACTTCCAAAACACAGACGCTGCC...GCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS TCA 90 bp | TGTCGTCATCGAAGGGCAGTGCCCCCACAAGCAGGGCAAATAGGATaGCTCCACAGCTCCACATGTCTGCCCGGCGGCCATCATACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CRHRRAVPPQAGQIG*LHSSTCLPGGHHTF Trigger: AAAAGTATGATGGCCGCCGGGCAGACATGTGGAGCTGTGGAGTCATCCTATTTGCCCTGCTTGTGGGGGCACTGCCCTTCGATGACGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS-3UTR CAA 90 bp | GAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGCAGGTGGACAATGTCCGCTTaGATGCTGCTGAGAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EFLPGGQIRTEGHRGGGRWTMSA*MLLRGL Trigger: CAAACCTCTCAGCAGCATCAAAGCGGACATTGTCCA...CCTGCCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGAGTAGCTGGCGCAGGTaGTCGTCATCGAAGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRETRIPSGRANPYRRSQSSWRR*SSSKGS Trigger: ACTGCCCTTCGATGACGACAACCTGCGCCAGCTACT...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | ACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGGGGTGGACAATGTCCGCTTaGATGCTGCTGAGAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRIPSGRANPYRRSQGRGWTMSA*MLLRGL Trigger: CAAACCTCTCAGCAGCATCAAAGCGGACATTGTCCA...CCCCCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | GACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTATCATACTTTTCCCCCTaGATCACCTCTGGACATGCG | + |
|
Preference number: 5 (lower is better) Translates to: DAGRITRNQNSFREGKSVSYFSP*ITSGHA Trigger: CGCATGTCCAGAGGTGATCAAGGGGGAAAAGTATGA...TACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | TGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAACCCATTCAATCATACTTTTCCCCCTaGATCACCTCTGGACATGCG | + |
|
Preference number: 5 (lower is better) Translates to: WMRHAPFRLSRELPQPIQSYFSP*ITSGHA Trigger: CGCATGTCCAGAGGTGATCAAGGGGGAAAAGTATGA...TTGAATGGGTTGTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS-3UTR CAA 90 bp | GTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAGGATGTTTCTGAATTaGCTCCAGACTGAGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVVAAAGGIRHRRRQDHARMFLN*LQTEPF Trigger: AAAAGGCTCAGTCTGGAGCAAATTCAGAAACATCCT...CGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | TCACGCGAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGCGAACCAGGAGCGTTTaGCCAGCTCAGGAGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SRETRIPSGRANPYRRSQRTRSV*PAQERI Trigger: AATCCTCTCCTGAGCTGGCAAAACGCTCCTGGTTCG...CTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTCGCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | GGCGGAATCAGACACAGACGCAGGCAGGATCACGCGAAACCAGAATTCCTTCCGATGCTGCTGAGAGGTTaGTCCTTTAGCACGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGIRHRRRQDHAKPEFLPMLLRG*SFSTRN Trigger: ATTCCTCGTGCTAAAGGACAAACCTCTCAGCAGCAT...CGGAAGGAATTCTGGTTTCGCGTGATCCTGCCTGCGTCTGTGTCTGATTCCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTATTTATTTTTGTTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGAGGGTCCAGCTCGCCATaGGAAGGCAGGCTACGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RLFIFVVVVVVAAAGGIRGSSSP*EGRLRM Trigger: CATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCC...TCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAACAAAAATAAATAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
||
| CDS-3UTR CAA 90 bp | GAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGATGCTGCTGAGAGGTTaGTCCTTTAGCACGAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ETRIPSGRANPYRRSQGRMLLRG*SFSTRN Trigger: ATTCCTCGTGCTAAAGGACAAACCTCTCAGCAGCAT...CCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS TCA 90 bp | GATTCCGACAGCTTCTCCCTGTTCACGATCTTGACAGCGACCTTCTaGCCCGTGATGCAGTGGACTCCAAGTTTAACTAGACCTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSDSFSLFTILTATF*PVMQWTPSLTRPVC Trigger: ACAGACAGGTCTAGTTAAACTTGGAGTCCACTGCATCACGGGTCAGAAGGTCGCTGTCAAGATCGTGAACAGGGAGAAGCTGTCGGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000206024.2 |
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| CDS TCA 90 bp | GATTCCGACAGCTTCTCCCTGTTCACGATCTTGACAGCGACCTTCTaGCCCGTGATGCAGTGGACTCCAAGTTTAACTAGACCCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DSDSFSLFTILTATF*PVMQWTPSLTRPIS Trigger: AGAAATGGGTCTAGTTAAACTTGGAGTCCACTGCATCACGGGTCAGAAGGTCGCTGTCAAGATCGTGAACAGGGAGAAGCTGTCGGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205666.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGACACAGACGCAGGCAGGATGTTTCTGAATTaGCTCCAGACTGAGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLPPAESDTDAGRMFLN*LQTEPF Trigger: AAAAGGCTCAGTCTGGAGCAAATTCAGAAACATCCT...GCCTGCGTCTGTGTCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | ATCCATAAAACTGGATGCGGCACGCCCCCTTCAGGCTTTCTAGGGAACTGCCACAGGATGTTTCTGAATTaGCTCCAGACTGAGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHKTGCGTPPSGFLGNCHRMFLN*LQTEPF Trigger: AAAAGGCTCAGTCTGGAGCAAATTCAGAAACATCCT...GTGGCAGTTCCCTAGAAAGCCTGAAGGGGGCGTGCCGCATCCAGTTTTATGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS-3UTR CAA 90 bp | GAAACCAGAATTCCTTCCGGGAGGGCAAATCCGTACAGAAGGTCACAGGGGAGGATAGATCATCTTTTCTaGGTTTTCCTCCTCGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ETRIPSGRANPYRRSQGRIDHLF*VFLLAS Trigger: CGAAGCGAGGAGGAAAACCAAGAAAAGATGATCTAT...CCTCCCCTGTGACCTTCTGTACGGATTTGCCCTCCCGGAAGGAATTCTGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS TCA 90 bp | TGTCCTTTAGCACGAGGAATATTTGTTCTTCTTTGTCCAAGGAGATaGAATTCCCGAACCAGGAGCGTTTTGCCAGCTCAGGAGAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: CPLARGIFVLLCPRR*NSRTRSVLPAQERI Trigger: AATCCTCTCCTGAGCTGGCAAAACGCTCCTGGTTCGGGAATTTCATCTCCTTGGACAAAGAAGAACAAATATTCCTCGTGCTAAAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS-3UTR CAA 90 bp | AGGCTATTTATTTTTGTTGTTGTTGTTGTTGTTGCTGCCGCCGGCGGAATCAGAATAGATCATCTTTTCTaGGTTTTCCTCCTCGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLFIFVVVVVVAAAGGIRIDHLF*VFLLAS Trigger: CGAAGCGAGGAGGAAAACCAAGAAAAGATGATCTAT...TCTGATTCCGCCGGCGGCAGCAACAACAACAACAACAACAAAAATAAATAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048248.9 |
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| CDS CCA 72 bp | GTGCAAGGGGGTTCCGCCGGAGGAGCGCGGGGAGCCTaGTGGTCCAGGCAAGGGCGTGGAACGGGCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQGGSAGGARGA*WSRQGRGTGTG Trigger: CCCAGTGCCCGTTCCACGCCCTTGCCTGGACCACCAGGCTCCCCGCGCTCCTCCGGCGGAACCCCCTTGCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS CCA 72 bp | GACGCCACCGCCTGGGCTGGGAGGTGGCGTCGTTCCTaGGGTCCCCGTAGGGCTGGCTCGAGGCGTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DATAWAGRWRRS*GPRRAGSRRVQ Trigger: CTGCACACGCCTCGAGCCAGCCCTACGGGGACCCCAGGAACGACGCCACCTCCCAGCCCAGGCGGTGGCGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS GCA 72 bp | CCCGTAGGGCTGGCTCGAGGCGTGTGCAGAGGTGAGTaGAAGGGGGTTCCGCCGGAGGAGCGCGGGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVGLARGVCRGE*KGVPPEERGEP Trigger: AGGCTCCCCGCGCTCCTCCGGCGGAACCCCCTTGCACTCACCTCTGCACACGCCTCGAGCCAGCCCTACGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS TCA 72 bp | AGCGAGGGGAGCCCAGGAAGCTGTTGCGGATGGAGTTaGGCCGACTTCTCCAGGCGGCTCCCCCGACGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SEGSPGSCCGWS*ADFSRRLPRRH Trigger: GTGGCGTCGGGGGAGCCGCCTGGAGAAGTCGGCTCAACTCCATCCGCAACAGCTTCCTGGGCTCCCCTCGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS CCA 72 bp | CAGGGTCCAGCTCGCCATTGGAAGGCAGGCTACGCATaGCTACTCTGCGGCCTGGGGCTGGCTCCAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGPARHWKAGYA*LLCGLGLAPGK Trigger: CTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS CAA 72 bp | AAGCGAGGGGAGCCCAGGAAGCTGTTGCGGATGGAGTaGAGCCGACTTCTCCAGGCGGCTCCCCCGACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KRGEPRKLLRME*SRLLQAAPPTP Trigger: TGGCGTCGGGGGAGCCGCCTGGAGAAGTCGGCTCAACTCCATCCGCAACAGCTTCCTGGGCTCCCCTCGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS GCA 72 bp | GCTCGCCATTGGAAGGCAGGCTACGCATGGCTACTCTaGGGCCTGGGGCTGGCTCCAGGCAAGGGTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ARHWKAGYAWLL*GLGLAPGKGLV Trigger: AACCAGACCCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS CAA 90 bp | CCCAGAGACGCCATGCTTTCCAGAACGTCAGGGTCCAGCTCGCCATaGGAAGGCAGGCTACGCATGGCTACTCTGCGGCCTGGGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRDAMLSRTSGSSSP*EGRLRMATLRPGAG Trigger: GCCAGCCCCAGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCCTGACGTTCTGGAAAGCATGGCGTCTCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS TCA 72 bp | CGAAGGGCAGTGCCCCCACAAGCAGGGCAAATAGGATaGCTCCACAGCTCCACATGTCTGCCCGGCGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRAVPPQAGQIG*LHSSTCLPGGH Trigger: ATGGCCGCCGGGCAGACATGTGGAGCTGTGGAGTCATCCTATTTGCCCTGCTTGTGGGGGCACTGCCCTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS TCA 72 bp | TCAGAGGGCTGGAGGACAGACCAGTGGAGGCTCCACTaGCGCTGCGGGATCTCTGACTGTGCTGGGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SEGWRTDQWRLH*RCGISDCAGPS Trigger: AGATGGCCCAGCACAGTCAGAGATCCCGCAGCGTCAGTGGAGCCTCCACTGGTCTGTCCTCCAGCCCTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS TCA 72 bp | TCCGCCTCTAGCCTCATCTCCAGCGCCTGGCTCCGGTaGGAAGGAAAAGACCGGACTCCTTGGGCTGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SASSLISSAWLR*EGKDRTPWAAQ Trigger: CTGAGCAGCCCAAGGAGTCCGGTCTTTTCCTTCTCACCGGAGCCAGGCGCTGGAGATGAGGCTAGAGGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS TCA 72 bp | AGACGGAGGGGCCGCCGCTGGCCTTGTATTCGGCCCTaGAGCTGGTCTGTGACAGTACACTGTGACTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRGRRWPCIRP*SWSVTVHCDSG Trigger: GCCTGAGTCACAGTGTACTGTCACAGACCAGCTTCAGGGCCGAATACAAGGCCAGCGGCGGCCCCTCCGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS TCA 72 bp | GAGGGTTCTGGACCCTCAGAGGAGCTGATGTCCACCTaGAAGCGGACAGGCTTCTGGAAGACGGAGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: EGSGPSEELMST*KRTGFWKTEGP Trigger: CGGCCCCTCCGTCTTCCAGAAGCCTGTCCGCTTTCAGGTGGACATCAGCTCCTCTGAGGGTCCAGAACCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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| CDS CCA 72 bp | CCATGCTTTCCAGAACGTCAGGGTCCAGCTCGCCATTaGAAGGCAGGCTACGCATGGCTACTCTGCGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PCFPERQGPARH*KAGYAWLLCGL Trigger: CAGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCCTGACGTTCTGGAAAGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS CAA 72 bp | GCCATGCTTTCCAGAACGTCAGGGTCCAGCTCGCCATaGGAAGGCAGGCTACGCATGGCTACTCTGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AMLSRTSGSSSP*EGRLRMATLRP Trigger: AGGCCGCAGAGTAGCCATGCGTAGCCTGCCTTCCAATGGCGAGCTGGACCCTGACGTTCTGGAAAGCATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS CCA 72 bp | TACTCTGCGGCCTGGGGCTGGCTCCAGGCAAGGGTCTaGTTCGTGTTTCCCGCCCAGATACCAAGGATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: YSAAWGWLQARV*FVFPAQIPRMF Trigger: AAACATCCTTGGTATCTGGGCGGGAAACACGAACCAGACCCTTGCCTGGAGCCAGCCCCAGGCCGCAGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS TCA 72 bp | GGTTCGTGTTTCCCGCCCAGATACCAAGGATGTTTCTaGATTTGCTCCAGACTGAGCCTTTTCTCGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSCFPPRYQGCF*ICSRLSLFSGS Trigger: GGAGCCCGAGAAAAGGCTCAGTCTGGAGCAAATTCAGAAACATCCTTGGTATCTGGGCGGGAAACACGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS TCA 72 bp | AGCTTCTCCCTGTTCACGATCTTGACAGCGACCTTCTaGCCCGTGATGCAGTGGACTCCAAGTTTAACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFSLFTILTATF*PVMQWTPSLTR Trigger: TCTAGTTAAACTTGGAGTCCACTGCATCACGGGTCAGAAGGTCGCTGTCAAGATCGTGAACAGGGAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048248.9 ENSMUST00000205666.2 ENSMUST00000206024.2 |
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| CDS CAA 90 bp | GACAGAAAGGCATGGACAATGTCCGCTTTGATGCTGCTGAGAGGTTaGTCCTTTAGCACGAGGAATATTTGTTCTTCTTTGTCCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DRKAWTMSALMLLRG*SFSTRNICSSLSKE Trigger: CTCCTTGGACAAAGAAGAACAAATATTCCTCGTGCTAAAGGACAAACCTCTCAGCAGCATCAAAGCGGACATTGTCCATGCCTTTCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048248.9 ENSMUST00000120836.8 |
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