Pregenerated sensors for BRS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031130Ensembl transcript IDs: ENSMUST00000033464.4
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGATGATCTGATGACACGTGAACAGCCAGATGACAATTCCAAGTaGCAGTTCCTCTGGGCTTTAGAAAGAGGGCACTGCTCACTGAAA | + |
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Preference number: 1 (lower is better) Translates to: VDDLMTREQPDDNSK*QFLWALERGHCSLK Trigger: TTTCAGTGAGCAGTGCCCTCTTTCTAAAGCCCAGAGGAACTGCCACTTGGAATTGTCATCTGGCTGTTCACGTGTCATCAGATCATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR TCA 90 bp | GTTCCTCTGGGCTTTAGAAAGAGGGCACTGCTCACTGAAATGAAATaGGTTCCCTTAGAAGAAAGAGTTTCCAACAGTGACAGCTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: VPLGFRKRALLTEMK*VPLEERVSNSDSLE Trigger: TTCTAAGCTGTCACTGTTGGAAACTCTTTCTTCTAAGGGAACTCATTTCATTTCAGTGAGCAGTGCCCTCTTTCTAAAGCCCAGAGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR GCA 90 bp | TGGTGGGCTTTGTTGTATTTAGAAAGCCCAAATGGCATTACTGTTTaGACCTTGAAGAAAATGATGGTTTGTCTATTACTTACAAGGATA | + |
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Preference number: 1 (lower is better) Translates to: WWALLYLESPNGITV*TLKKMMVCLLLTRI Trigger: TATCCTTGTAAGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGGCTTTCTAAATACAACAAAGCCCACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAATCCTTCCTCTGGGGCCCCTGGTTGTCCTGTGAATAAGACAAATTCCTCAAGCCTTCTTCACAGTTaGCTGGTATTTCCAAACCTC | + |
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Preference number: 2 (lower is better) Translates to: KNPSSGAPGCPVNKTNSSSLLHS*LVFPNL Trigger: GAGGTTTGGAAATACCAGTCAACTGTGAAGAAGGCT...TGAGGAATTTGTCTTATTCACAGGACAACCAGGGGCCCCAGAGGAAGGATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAATCCTTCCTCTGGGGCCCCTGGTTGTCCTGTGAATAAGACAAATTCCTCACTCTTCTTCTCTACTTaGTGGGCTTTGTTGTATTTA | + |
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Preference number: 2 (lower is better) Translates to: KNPSSGAPGCPVNKTNSSLFFST*WALLYL Trigger: TAAATACAACAAAGCCCACCAAGTAGAGAAGAAGAG...TGAGGAATTTGTCTTATTCACAGGACAACCAGGGGCCCCAGAGGAAGGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR TCA 90 bp | CCCAAATGGCATTACTGTTTGCACCTTGAAGAAAATGATGGTTTGTCTATTACTCTTCAACACAATTCATaGACAACAGAAAACCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: PKWHYCLHLEENDGLSITLQHNS*TTENPD Trigger: GTCTGGGTTTTCTGTTGTTCATGAATTGTGTTGAAG...AGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR TCA 90 bp | GCGATTGAAGGAAAAGGGCAATCACTCTGTGAAAGCATATATAGAGAGATATTTTGTTTTCTCTCTTTTTaGTCTCCTAGTTTGCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AIEGKGQSLCESIYREIFCFLSF*SPSLRS Trigger: ACTCCGCAAACTAGGAGATCAAAAAGAGAGAAAACA...AAATATCTCTCTATATATGCTTTCACAGAGTGATTGCCCTTTTCCTTCAATCGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR CAA 90 bp | TTGGTGGGCTTTGTTGTATTTAGAAAGCCCAAATGGCATTACTGTTaGCACCTTGAAGAAAATGATGGTTTGTCTATTACTTACAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LVGFVVFRKPKWHYC*HLEENDGLSITYKD Trigger: ATCCTTGTAAGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGGCTTTCTAAATACAACAAAGCCCACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR GCA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAATTTGATCTCCTAGTTTaGGGAGTAGAATCTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: HFNCKISYNGMAIEGKGQFDLLV*GVESLD Trigger: ATCTAGAGATTCTACTCCGCAAACTAGGAGATCAAA...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR CCA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAATTCTTCACAGTTGACTaGTATTTCCAAACCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HFNCKISYNGMAIEGKGQFFTVD*YFQTSS Trigger: AGAAGAGGTTTGGAAATACCAGTCAACTGTGAAGAA...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR TCA 72 bp | ACAAGAATCCTTCCTCTGGGGCCCCTGGTTGTCCTGTaGATAAGACAAATTCCTCACAATGCTCGTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: TRILPLGPLVVL*IRQIPHNARET Trigger: TGTCTCACGAGCATTGTGAGGAATTTGTCTTATTCACAGGACAACCAGGGGCCCCAGAGGAAGGATTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR CAA 90 bp | AAGAATCCTTCCTCTGGGGCCCCTGGTTGTCCTGTGAATAAGACAAATTCCTCATCTACTTGGTGGGCTTaGTTGTATTTAGAAAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: KNPSSGAPGCPVNKTNSSSTWWA*LYLESP Trigger: TGGGCTTTCTAAATACAACAAAGCCCACCAAGTAGA...TGAGGAATTTGTCTTATTCACAGGACAACCAGGGGCCCCAGAGGAAGGATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR TCA 72 bp | CAAATGGCAATAGAATTACATAAATTCAGGACGTGTTaGCCCAGTAAGGGAAGCACCCTGCCCCAGAATCAG | + |
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Preference number: 3 (lower is better) Translates to: QMAIELHKFRTC*PSKGSTLPQNQ Trigger: CTGATTCTGGGGCAGGGTGCTTCCCTTACTGGGTCAACACGTCCTGAATTTATGTAATTCTATTGCCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR-3UTR CAA 90 bp | ATGAGTGCACAAGAGATGAGGAATATCAGAGAGATGGGATCCAATTCGATATTTCAGCCTTCTTCACAGTaGACTGGTATTTCCAAACCT | + |
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Preference number: 3 (lower is better) Translates to: MSAQEMRNIREMGSNSIFQPSSQ*TGISKP Trigger: AGGTTTGGAAATACCAGTCAACTGTGAAGAAGGCTG...AAATATCGAATTGGATCCCATCTCTCTGATATTCCTCATCTCTTGTGCACTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR GCA 72 bp | AGACAAATTCCTCACAATGCTCGTGAGACATGGTTTTaGCTAGTTATTAACCAAATGGCAATAGAATTACAT | + |
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Preference number: 3 (lower is better) Translates to: RQIPHNARETWF*LVINQMAIELH Trigger: ATGTAATTCTATTGCCATTTGGTTAATAACTAGGCAAAACCATGTCTCACGAGCATTGTGAGGAATTTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | AAGAATCCTTCCTCTGGGGCCCCTGGTTGTCCTGTGAATAAGACAAATTCCTCAAAGTGGCTTCACGACTaGTTTGTATCTGTCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: KNPSSGAPGCPVNKTNSSKWLHD*FVSVSA Trigger: AGCGCTGACAGATACAAAGCAGTCGTGAAGCCACTT...TGAGGAATTTGTCTTATTCACAGGACAACCAGGGGCCCCAGAGGAAGGATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | ATGAGTGCACAAGAGATGAGGAATATCAGAGAGATGGGATCCAATTCGATATTTAGGCTCAGGCTGCTCTaGCTTGAGGCAGCAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MSAQEMRNIREMGSNSIFRLRLL*LEAAEL Trigger: CAGCTCTGCTGCCTCAAGGCAGAGCAGCCTGAGCCT...AAATATCGAATTGGATCCCATCTCTCTGATATTCCTCATCTCTTGTGCACTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR TCA 90 bp | GGAATATCAGAGAGATGGGATCCAATTCGATATTTAAACCTTTATCTGGTTTCTCAGGCTGCTCTGCCTTaGGGCAGCAGAGCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GISERWDPIRYLNLYLVSQAALP*GSRAEL Trigger: AAGCTCAGCTCTGCTGCCTCAAGGCAGAGCAGCCTG...AGAAACCAGATAAAGGTTTAAATATCGAATTGGATCCCATCTCTCTGATATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | AAACCTTTATCTGGTTTCTTTACCATCCCTTCTATACAGCCTTCTTCACAGTTGTGCCAGGTAGTGGGTTaGATCCACAGGCACACAAGT | + |
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Preference number: 4 (lower is better) Translates to: KPLSGFFTIPSIQPSSQLCQVVG*IHRHTS Trigger: ACTTGTGTGCCTGTGGATGCAACCCACTACCTGGCA...CAACTGTGAAGAAGGCTGTATAGAAGGGATGGTAAAGAAACCAGATAAAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR TCA 90 bp | AAACCTTTATCTGGTTTCTTTACCATCCCTTCTATACAGCCTTCTTCACAGTTGTTGAGGCAGCAGAGCTaGGCTTTAAAATGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KPLSGFFTIPSIQPSSQLLRQQS*ALKCCW Trigger: CCAGCAGCATTTTAAAGCTCAGCTCTGCTGCCTCAA...CAACTGTGAAGAAGGCTGTATAGAAGGGATGGTAAAGAAACCAGATAAAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | ATGAGTGCACAAGAGATGAGGAATATCAGAGAGATGGGATCCAATTCGATATTTGATGCCACCAGCTTTTaGACAGGTCTTCAGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: MSAQEMRNIREMGSNSIFDATSF*TGLQNG Trigger: GCCATTCTGAAGACCTGTGCAAAAGCTGGTGGCATC...AAATATCGAATTGGATCCCATCTCTCTGATATTCCTCATCTCTTGTGCACTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CCA 90 bp | CCCAAATGGCATTACTGTTTGCACCTTGAAGAAAATGATGGTTTGTCTATTACTGGGCTGTCGCTCAAGTaGCTTCACGACTGCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: PKWHYCLHLEENDGLSITGLSLK*LHDCFV Trigger: TACAAAGCAGTCGTGAAGCCACTTGAGCGACAGCCC...AGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CCA 90 bp | CCCAAATGGCATTACTGTTTGCACCTTGAAGAAAATGATGGTTTGTCTATTACTTCTTCAGAATGGCATTaGGGGGCTGTCGCTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PKWHYCLHLEENDGLSITSSEWH*GAVAQV Trigger: CACTTGAGCGACAGCCCCCCAATGCCATTCTGAAGA...AGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CCA 90 bp | GCGATTGAAGGAAAAGGGCAATCACTCTGTGAAAGCATATATAGAGAGATATTTCAGTGCTTCTATTCCTaGAGAGTTGTCTCCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AIEGKGQSLCESIYREIFQCFYS*RVVSGP Trigger: TGGACCGGAGACAACTCTCCAGGAATAGAAGCACTG...AAATATCTCTCTATATATGCTTTCACAGAGTGATTGCCCTTTTCCTTCAATCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CCA 90 bp | GCGATTGAAGGAAAAGGGCAATCACTCTGTGAAAGCATATATAGAGAGATATTTATCTGCTTTCGGGCATaGCTTTGTTCCTCAGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: AIEGKGQSLCESIYREIFICFRA*LCSSVG Trigger: ACCGACTGAGGAACAAAGCCATGCCCGAAAGCAGAT...AAATATCTCTCTATATATGCTTTCACAGAGTGATTGCCCTTTTCCTTCAATCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR CAA 72 bp | CAGTTGACTGGTATTTCCAAACCTCTTCTTCTCTACTaGGTGGGCTTTGTTGTATTTAGAAAGCCCAAATGG | + |
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Preference number: 4 (lower is better) Translates to: QLTGISKPLLLY*VGFVVFRKPKW Trigger: CCATTTGGGCTTTCTAAATACAACAAAGCCCACCAAGTAGAGAAGAAGAGGTTTGGAAATACCAGTCAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR TCA 90 bp | GGAATATCAGAGAGATGGGATCCAATTCGATATTTAAACCTTTATCTGGTTTCTTCCGAGGATGCCCACTaGAATGATCCCAGCATAAGT | + |
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Preference number: 4 (lower is better) Translates to: GISERWDPIRYLNLYLVSSEDAH*NDPSIS Trigger: ACTTATGCTGGGATCATTTCAGTGGGCATCCTCGGA...AGAAACCAGATAAAGGTTTAAATATCGAATTGGATCCCATCTCTCTGATATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | GGAATATCAGAGAGATGGGATCCAATTCGATATTTAAACCTTTATCTGGTTTCTAAACAGCCATCCTTCTaGCAGGTAGTGGGTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: GISERWDPIRYLNLYLVSKQPSF*QVVGCI Trigger: GATGCAACCCACTACCTGGCAGAAGGATGGCTGTTT...AGAAACCAGATAAAGGTTTAAATATCGAATTGGATCCCATCTCTCTGATATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | AAACCTTTATCTGGTTTCTTTACCATCCCTTCTATACAGCCTTCTTCACAGTTGTCGGTATGTTCAGGGTaGTTTTGTAAAGAGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KPLSGFFTIPSIQPSSQLSVCSG*FCKESW Trigger: CCAGGACTCTTTACAAAAGCACCCTGAACATACCGA...CAACTGTGAAGAAGGCTGTATAGAAGGGATGGTAAAGAAACCAGATAAAGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | CCCAAATGGCATTACTGTTTGCACCTTGAAGAAAATGATGGTTTGTCTATTACTAATTTCAGAGACATGTaGACTCCCAGTAGCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PKWHYCLHLEENDGLSITNFRDM*TPSSWD Trigger: GTCCCAGCTACTGGGAGTGCACATGTCTCTGAAATT...AGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | CCCAAATGGCATTACTGTTTGCACCTTGAAGAAAATGATGGTTTGTCTATTACTATAGATGGCACACAGTaGTTCTATTCCTGGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PKWHYCLHLEENDGLSITIDGTQ*FYSWRV Trigger: AACTCTCCAGGAATAGAAGCACTGTGTGCCATCTAT...AGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CCA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAAGCTTTAAAATGCTGCTaGAAGGTCTTGCTCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HFNCKISYNGMAIEGKGQALKCC*KVLLSQ Trigger: TTGGCTGAGCAAGACCTTCCAGCAGCATTTTAAAGC...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR TCA 90 bp | CCCAAATGGCATTACTGTTTGCACCTTGAAGAAAATGATGGTTTGTCTATTACTCATAGCTTTCATAAGTaGAGGAGTGGTAGAGATACA | + |
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Preference number: 4 (lower is better) Translates to: PKWHYCLHLEENDGLSITHSFHK*RSGRDT Trigger: TGTATCTCTACCACTCCTTCACTTATGAAAGCTATG...AGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR TCA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAAGAAAGTGTATACATTTaGGAATATAGCCTCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HFNCKISYNGMAIEGKGQESVYI*EYSLWQ Trigger: CTGCCAGAGGCTATATTCTCAAATGTATACACTTTC...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR TCA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAAAGGGTAGGAGTTACATaGTTCAAATGTCACATTTCT | + |
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Preference number: 4 (lower is better) Translates to: HFNCKISYNGMAIEGKGQRVGVT*FKCHIS Trigger: AGAAATGTGACATTTGAATCATGTAACTCCTACCCT...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR GCA 90 bp | GGAATATCAGAGAGATGGGATCCAATTCGATATTTAAACCTTTATCTGGTTTCTGACATCAGAGTGGTTTaGATAGCTTTCATAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GISERWDPIRYLNLYLVSDIRVV*IAFISE Trigger: TTCACTTATGAAAGCTATGCAAACCACTCTGATGTC...AGAAACCAGATAAAGGTTTAAATATCGAATTGGATCCCATCTCTCTGATATTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR CAA 72 bp | TATTTAGAAAGCCCAAATGGCATTACTGTTTGCACCTaGAAGAAAATGATGGTTTGTCTATTACTTACAAGG | + |
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Preference number: 4 (lower is better) Translates to: YLESPNGITVCT*KKMMVCLLLTR Trigger: CCTTGTAAGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGGCTTTCTAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| 3UTR CAA 72 bp | ATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATaGAAGGAAAAGGGCAATCACTCTGTGAAAGCATAT | + |
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Preference number: 4 (lower is better) Translates to: ISIARFLIMEWR*KEKGNHSVKAY Trigger: ATATGCTTTCACAGAGTGATTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 90 bp | GGCACTACTGCCACTGAACAGGGTCACACTAATTTCAGAGACATGTaGACTCCCAGTAGCTGGGACCCGCCCCATCACAGTGAGGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GTTATEQGHTNFRDM*TPSSWDPPHHSEVV Trigger: AACAACCTCACTGTGATGGGGCGGGTCCCAGCTACTGGGAGTGCACATGTCTCTGAAATTAGTGTGACCCTGTTCAGTGGCAGTAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CCA 90 bp | GAACAGGGTCACACTAATTTCAGAGACATGTGCACTCCCAGTAGCTaGGACCCGCCCCATCACAGTGAGGTTGTTAAGGGGGATGTCACC | + |
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Preference number: 5 (lower is better) Translates to: EQGHTNFRDMCTPSS*DPPHHSEVVKGDVT Trigger: GGTGACATCCCCCTTAACAACCTCACTGTGATGGGGCGGGTCCCAGCTACTGGGAGTGCACATGTCTCTGAAATTAGTGTGACCCTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CCA 90 bp | CGATCCAGATGCCACCAGCTTTTGCACAGGTCTTCAGAATGGCATTaGGGGGCTGTCGCTCAAGTGGCTTCACGACTGCTTTGTATCTGT | + |
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Preference number: 5 (lower is better) Translates to: RSRCHQLLHRSSEWH*GAVAQVASRLLCIC Trigger: ACAGATACAAAGCAGTCGTGAAGCCACTTGAGCGACAGCCCCCCAATGCCATTCTGAAGACCTGTGCAAAAGCTGGTGGCATCTGGATCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 90 bp | GAAGGAAAGCACTTTACAACCGACCTTTCCAAACAGCCATCCTTCTaGCAGGTAGTGGGTTGCATCCACAGGCACACAAGTCAGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EGKHFTTDLSKQPSF*QVVGCIHRHTSQQK Trigger: CTTCTGCTGACTTGTGTGCCTGTGGATGCAACCCACTACCTGGCAGAAGGATGGCTGTTTGGAAAGGTCGGTTGTAAAGTGCTTTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 90 bp | GAAGGAGTGGTAGAGATACAGGAGATGATTCGGCAACCAGCAGAGTaGGAACAGAGCCACCAGCACCAAAACTGTTTTGGCAATTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: EGVVEIQEMIRQPAE*EQSHQHQNCFGNSL Trigger: AAGAGAATTGCCAAAACAGTTTTGGTGCTGGTGGCTCTGTTCGCACTCTGCTGGTTGCCGAATCATCTCCTGTATCTCTACCACTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CAA 90 bp | AAGAATCCTTCCTCTGGGGCCCCTGGTTGTCCTGTGAATAAGACAAATTCCTCACTTTCGGGCATGGCTTaGTTCCTCAGTCGGTATGTT | + |
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Preference number: 5 (lower is better) Translates to: KNPSSGAPGCPVNKTNSSLSGMA*FLSRYV Trigger: AACATACCGACTGAGGAACAAAGCCATGCCCGAAAG...TGAGGAATTTGTCTTATTCACAGGACAACCAGGGGCCCCAGAGGAAGGATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CCA 90 bp | GATCCCAGCATAAGTGATATAGATGGCACACAGTGCTTCTATTCCTaGAGAGTTGTCTCCGGTCCATCCTTTATGTGTAGTATCGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: DPSISDIDGTQCFYS*RVVSGPSFMCSIVG Trigger: TCCAACGATACTACACATAAAGGATGGACCGGAGACAACTCTCCAGGAATAGAAGCACTGTGTGCCATCTATATCACTTATGCTGGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAACTGCCAGGTAGTGGGTaGCATCCACAGGCACACAAG | + |
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Preference number: 5 (lower is better) Translates to: HFNCKISYNGMAIEGKGQLPGSG*HPQAHK Trigger: CTTGTGTGCCTGTGGATGCAACCCACTACCTGGCAG...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS TCA 90 bp | CTTGAAAAAGACTTTGATGAGGATAGCATTTCCGAGGATGCCCACTaGAATGATCCCAGCATAAGTGATATAGATGGCACACAGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LEKDFDEDSISEDAH*NDPSISDIDGTQCF Trigger: GAAGCACTGTGTGCCATCTATATCACTTATGCTGGGATCATTTCAGTGGGCATCCTCGGAAATGCTATCCTCATCAAAGTCTTTTTCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 90 bp | CACCCGAGAGAAAATGATGATAACAAAAGGGACATCAGAGTGGTTTaGATAGCTTTCATAAGTGAAGGAGTGGTAGAGATACAGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: HPRENDDNKRDIRVV*IAFISEGVVEIQEM Trigger: CATCTCCTGTATCTCTACCACTCCTTCACTTATGAAAGCTATGCAAACCACTCTGATGTCCCTTTTGTTATCATCATTTTCTCTCGGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CAA 90 bp | GCGATTGAAGGAAAAGGGCAATCACTCTGTGAAAGCATATATAGAGAGATATTTTCTATTCCTGGAGAGTaGTCTCCGGTCCATCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: AIEGKGQSLCESIYREIFSIPGE*SPVHPL Trigger: TAAAGGATGGACCGGAGACAACTCTCCAGGAATAGA...AAATATCTCTCTATATATGCTTTCACAGAGTGATTGCCCTTTTCCTTCAATCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAATGGAGACGACAGAGCTaGATGTTTCTGTGTCATTTG | + |
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Preference number: 5 (lower is better) Translates to: HFNCKISYNGMAIEGKGQWRRQS*MFLCHL Trigger: CAAATGACACAGAAACATCAAGCTCTGTCGTCTCCA...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CAA 90 bp | ATGAGTGCACAAGAGATGAGGAATATCAGAGAGATGGGATCCAATTCGATATTTGTCTTGAAAAAGACTTaGATGAGGATAGCATTTCCG | + |
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Preference number: 5 (lower is better) Translates to: MSAQEMRNIREMGSNSIFVLKKT*MRIAFP Trigger: CGGAAATGCTATCCTCATCAAAGTCTTTTTCAAGAC...AAATATCGAATTGGATCCCATCTCTCTGATATTCCTCATCTCTTGTGCACTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CAA 90 bp | CATTTCAATTGCAAGATTTCTTATAATGGAATGGCGATTGAAGGAAAAGGGCAAAGCACCAAAACTGTTTaGGCAATTCTCTTCCGGGAT | + |
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Preference number: 5 (lower is better) Translates to: HFNCKISYNGMAIEGKGQSTKTV*AILFRD Trigger: ATCCCGGAAGAGAATTGCCAAAACAGTTTTGGTGCT...TTGCCCTTTTCCTTCAATCGCCATTCCATTATAAGAAATCTTGCAATTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS-3UTR CAA 90 bp | CCCAAATGGCATTACTGTTTGCACCTTGAAGAAAATGATGGTTTGTCTATTACTCAGAGAATGTATTTCTaGCAAAAGCCTCTCAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: PKWHYCLHLEENDGLSITQRMYF*QKPLRD Trigger: ATCTCTGAGAGGCTTTTGCAAGAAATACATTCTCTG...AGTAATAGACAAACCATCATTTTCTTCAAGGTGCAAACAGTAATGCCATTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS TCA 90 bp | TTCAAATGTCACATTTCTGTTAGGATCTTGGAAAGTGTATACATTTaGGAATATAGCCTCTGGCAGAGCAAATATCATAGACACGATCCA | + |
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Preference number: 5 (lower is better) Translates to: FKCHISVRILESVYI*EYSLWQSKYHRHDP Trigger: TGGATCGTGTCTATGATATTTGCTCTGCCAGAGGCTATATTCTCAAATGTATACACTTTCCAAGATCCTAACAGAAATGTGACATTTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS TCA 90 bp | ATGTATTTCTTGCAAAAGCCTCTCAGAGATAGGGTAGGAGTTACATaGTTCAAATGTCACATTTCTGTTAGGATCTTGGAAAGTGTATAC | + |
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Preference number: 5 (lower is better) Translates to: MYFLQKPLRDRVGVT*FKCHISVRILESVY Trigger: GTATACACTTTCCAAGATCCTAACAGAAATGTGACATTTGAATCATGTAACTCCTACCCTATCTCTGAGAGGCTTTTGCAAGAAATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CAA 72 bp | CTCCCAGTAGCTGGGACCCGCCCCATCACAGTGAGGTaGTTAAGGGGGATGTCACCAAGAGGAGGCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LPVAGTRPITVR*LRGMSPRGGSG Trigger: GCCTGAGCCTCCTCTTGGTGACATCCCCCTTAACAACCTCACTGTGATGGGGCGGGTCCCAGCTACTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CAA 90 bp | ACATGTGCACTCCCAGTAGCTGGGACCCGCCCCATCACAGTGAGGTaGTTAAGGGGGATGTCACCAAGAGGAGGCTCAGGCTGCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TCALPVAGTRPITVR*LRGMSPRGGSGCSA Trigger: GGCAGAGCAGCCTGAGCCTCCTCTTGGTGACATCCCCCTTAACAACCTCACTGTGATGGGGCGGGTCCCAGCTACTGGGAGTGCACATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 72 bp | AAGGGGGATGTCACCAAGAGGAGGCTCAGGCTGCTCTaGCTTGAGGCAGCAGAGCTGAGCTTTAAAATGCTG | + |
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Preference number: 6 (lower is better) Translates to: KGDVTKRRLRLL*LEAAELSFKML Trigger: CAGCATTTTAAAGCTCAGCTCTGCTGCCTCAAGGCAGAGCAGCCTGAGCCTCCTCTTGGTGACATCCCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CCA 72 bp | TGCCACCAGCTTTTGCACAGGTCTTCAGAATGGCATTaGGGGGCTGTCGCTCAAGTGGCTTCACGACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: CHQLLHRSSEWH*GAVAQVASRLL Trigger: AAGCAGTCGTGAAGCCACTTGAGCGACAGCCCCCCAATGCCATTCTGAAGACCTGTGCAAAAGCTGGTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CCA 72 bp | CACACTAATTTCAGAGACATGTGCACTCCCAGTAGCTaGGACCCGCCCCATCACAGTGAGGTTGTTAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HTNFRDMCTPSS*DPPHHSEVVKG Trigger: CCCCTTAACAACCTCACTGTGATGGGGCGGGTCCCAGCTACTGGGAGTGCACATGTCTCTGAAATTAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 72 bp | CACTTTACAACCGACCTTTCCAAACAGCCATCCTTCTaGCAGGTAGTGGGTTGCATCCACAGGCACACAAGT | + |
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Preference number: 6 (lower is better) Translates to: HFTTDLSKQPSF*QVVGCIHRHTS Trigger: ACTTGTGTGCCTGTGGATGCAACCCACTACCTGGCAGAAGGATGGCTGTTTGGAAAGGTCGGTTGTAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 72 bp | GTAGAGATACAGGAGATGATTCGGCAACCAGCAGAGTaGGAACAGAGCCACCAGCACCAAAACTGTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VEIQEMIRQPAE*EQSHQHQNCFG Trigger: GCCAAAACAGTTTTGGTGCTGGTGGCTCTGTTCGCACTCTGCTGGTTGCCGAATCATCTCCTGTATCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CCA 72 bp | GCAATTCTCTTCCGGGATTCAATCTGCTTTCGGGCATaGCTTTGTTCCTCAGTCGGTATGTTCAGGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AILFRDSICFRA*LCSSVGMFRVL Trigger: AAGCACCCTGAACATACCGACTGAGGAACAAAGCCATGCCCGAAAGCAGATTGAATCCCGGAAGAGAATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CAA 72 bp | TCTCTTCCGGGATTCAATCTGCTTTCGGGCATGGCTTaGTTCCTCAGTCGGTATGTTCAGGGTGCTTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLPGFNLLSGMA*FLSRYVQGAFV Trigger: TACAAAAGCACCCTGAACATACCGACTGAGGAACAAAGCCATGCCCGAAAGCAGATTGAATCCCGGAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS TCA 72 bp | GACTTTGATGAGGATAGCATTTCCGAGGATGCCCACTaGAATGATCCCAGCATAAGTGATATAGATGGCACA | + |
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Preference number: 6 (lower is better) Translates to: DFDEDSISEDAH*NDPSISDIDGT Trigger: TGTGCCATCTATATCACTTATGCTGGGATCATTTCAGTGGGCATCCTCGGAAATGCTATCCTCATCAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS TCA 72 bp | AAGGGACATCAGAGTGGTTTGCATAGCTTTCATAAGTaGAGGAGTGGTAGAGATACAGGAGATGATTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: KGHQSGLHSFHK*RSGRDTGDDSA Trigger: TGCCGAATCATCTCCTGTATCTCTACCACTCCTTCACTTATGAAAGCTATGCAAACCACTCTGATGTCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 72 bp | GGGCATGGCTTTGTTCCTCAGTCGGTATGTTCAGGGTaGTTTTGTAAAGAGTCCTGGCAATCAAAGAATAAT | + |
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Preference number: 6 (lower is better) Translates to: GHGFVPQSVCSG*FCKESWQSKNN Trigger: ATTATTCTTTGATTGCCAGGACTCTTTACAAAAGCACCCTGAACATACCGACTGAGGAACAAAGCCATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CAA 72 bp | GAGTTGTCTCCGGTCCATCCTTTATGTGTAGTATCGTaGGAGACGACAGAGCTTGATGTTTCTGTGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: ELSPVHPLCVVS*ETTELDVSVSF Trigger: AAATGACACAGAAACATCAAGCTCTGTCGTCTCCAACGATACTACACATAAAGGATGGACCGGAGACAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CAA 90 bp | ATTCCTGGAGAGTTGTCTCCGGTCCATCCTTTATGTGTAGTATCGTaGGAGACGACAGAGCTTGATGTTTCTGTGTCATTTGTAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: IPGELSPVHPLCVVS*ETTELDVSVSFVME Trigger: TTCCATTACAAATGACACAGAAACATCAAGCTCTGTCGTCTCCAACGATACTACACATAAAGGATGGACCGGAGACAACTCTCCAGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CCA 72 bp | ATAAGTGATATAGATGGCACACAGTGCTTCTATTCCTaGAGAGTTGTCTCCGGTCCATCCTTTATGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: ISDIDGTQCFYS*RVVSGPSFMCS Trigger: ACTACACATAAAGGATGGACCGGAGACAACTCTCCAGGAATAGAAGCACTGTGTGCCATCTATATCACTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CAA 72 bp | GGAACTGTTTGCATGGATTTAGTCTTGAAAAAGACTTaGATGAGGATAGCATTTCCGAGGATGCCCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: GTVCMDLVLKKT*MRIAFPRMPTE Trigger: TTCAGTGGGCATCCTCGGAAATGCTATCCTCATCAAAGTCTTTTTCAAGACTAAATCCATGCAAACAGTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS CAA 90 bp | AAAATATTTGGAACTGTTTGCATGGATTTAGTCTTGAAAAAGACTTaGATGAGGATAGCATTTCCGAGGATGCCCACTGAAATGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: KIFGTVCMDLVLKKT*MRIAFPRMPTEMIP Trigger: TGGGATCATTTCAGTGGGCATCCTCGGAAATGCTATCCTCATCAAAGTCTTTTTCAAGACTAAATCCATGCAAACAGTTCCAAATATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS GCA 72 bp | GAAAATGATGATAACAAAAGGGACATCAGAGTGGTTTaGATAGCTTTCATAAGTGAAGGAGTGGTAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: ENDDNKRDIRVV*IAFISEGVVEI Trigger: TATCTCTACCACTCCTTCACTTATGAAAGCTATGCAAACCACTCTGATGTCCCTTTTGTTATCATCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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| CDS TCA 72 bp | CACATTTCTGTTAGGATCTTGGAAAGTGTATACATTTaGGAATATAGCCTCTGGCAGAGCAAATATCATAGA | + |
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Preference number: 6 (lower is better) Translates to: HISVRILESVYI*EYSLWQSKYHR Trigger: TCTATGATATTTGCTCTGCCAGAGGCTATATTCTCAAATGTATACACTTTCCAAGATCCTAACAGAAATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033464.4 |
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