Pregenerated sensors for BRIX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022247Ensembl transcript IDs: ENSMUST00000022855.12, ENSMUST00000168761.2, ENSMUST00000169050.8
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCTGTTCTAATCTTCTGGCTCATTCTTTCTTCAGCACGTCTCTGTaGAACTGTGCCAGTGAAGCTGCCTTCTCTGCTGCTCTCAAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: ICSNLLAHSFFSTSL*NCASEAAFSAALKS Trigger: GCTCTTGAGAGCAGCAGAGAAGGCAGCTTCACTGGCACAGTTGCACAGAGACGTGCTGAAGAAAGAATGAGCCAGAAGATTAGAACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 90 bp | CTATGTTCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTGGTaGCTCAGGTTGCTGTTTTCCCTGTTGCTACTGCTCTCTAGAATC | + |
|
Preference number: 1 (lower is better) Translates to: LCSCISLVSYPHHHW*LRLLFSLLLLLSRI Trigger: GATTCTAGAGAGCAGTAGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGAACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 90 bp | CATCTATGTTCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTaGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTACTGCTCTCTAGA | + |
|
Preference number: 1 (lower is better) Translates to: HLCSCISLVSYPHHH*WLRLLFSLLLLLSR Trigger: TCTAGAGAGCAGTAGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGAACATAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR GCA 90 bp | TCCTGGAAGCTTCTAGCCTCTGTACAATGTATTCCAGGCCTAGAGTaGCTTCAGCCTCAACAGACTGAATTAAGCTCACCCTTTCTAGTT | + |
|
Preference number: 1 (lower is better) Translates to: SWKLLASVQCIPGLE*LQPQQTELSSPFLV Trigger: AACTAGAAAGGGTGAGCTTAATTCAGTCTGTTGAGGCTGAAGGCACTCTAGGCCTGGAATACATTGTACAGAGGCTAGAAGCTTCCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 90 bp | CTGTGCTTGACCTCAAATGAACTCTGGCTATCTGTTCTAATCTTCTaGCTCATTCTTTCTTCAGCACGTCTCTGTGCAACTGTGCCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: LCLTSNELWLSVLIF*LILSSARLCATVPV Trigger: CACTGGCACAGTTGCACAGAGACGTGCTGAAGAAAGAATGAGCCAGAAGATTAGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR GCA 90 bp | CAAGCTGACGGATTCAATCTGACTTCTCTCTTGGCCTCTTTGCTGTaGTTGACCTCAAATGAACTCTGGCTATCTGTTCTAATCTTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: QADGFNLTSLLASLL*LTSNELWLSVLIFW Trigger: CCAGAAGATTAGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 90 bp | ACTTCTCTCTTGGCCTCTTTGCTGTGCTTGACCTCAAATGAACTCTaGCTATCTGTTCTAATCTTCTGGCTCATTCTTTCTTCAGCACGT | + |
|
Preference number: 1 (lower is better) Translates to: TSLLASLLCLTSNEL*LSVLIFWLILSSAR Trigger: ACGTGCTGAAGAAAGAATGAGCCAGAAGATTAGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR GCA 90 bp | GCATATCCTATTCTCTCCCATCTTTTTCTGACTCGTCACTTTGTCTaGCACGTAATTATATATCACCTTCAAACAAGGGTGTTTCCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: AYPILSHLFLTRHFV*HVIIYHLQTRVFPS Trigger: AGAAGGAAACACCCTTGTTTGAAGGTGATATATAATTACGTGGCAGACAAAGTGACGAGTCAGAAAAAGATGGGAGAGAATAGGATATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGCCTAGAGTGCCTTCAGCCTCAACAGACTGAATTAAGCTCACCCTTTCTAGTGCAACTGTGCCAGTaGAGCTGCCTTCTCTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PGLECLQPQQTELSSPFLVQLCQ*SCLLCC Trigger: GCAGCAGAGAAGGCAGCTTCACTGGCACAGTTGCAC...TAGAAAGGGTGAGCTTAATTCAGTCTGTTGAGGCTGAAGGCACTCTAGGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGCTATCCCCATCATCACTGGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTAGAAAACTCAGTAAATaGCCATCTCCTCCACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SQLSPSSLVAQVAVFPVARKLSK*PSPPLC Trigger: GCAGAGTGGAGGAGATGGTCATTTACTGAGTTTTCT...AGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGCCTAGAGTGCCTTCAGCCTCAACAGACTGAATTAAGCTCACCCTTTCTATCTCCCATCTTTTTCTaGCTCGTCACTTTGTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PGLECLQPQQTELSSPFLSPIFF*LVTLSA Trigger: GGCAGACAAAGTGACGAGTCAGAAAAAGATGGGAGA...TAGAAAGGGTGAGCTTAATTCAGTCTGTTGAGGCTGAAGGCACTCTAGGCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 90 bp | GCTCAAACTCCTCTCCAAGCTGACGGATTCAATCTGACTTCTCTCTaGGCCTCTTTGCTGTGCTTGACCTCAAATGAACTCTGGCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: AQTPLQADGFNLTSL*ASLLCLTSNELWLS Trigger: AGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGCTTGGAGAGGAGTTTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 90 bp | GCTGACGGATTCAATCTGACTTCTCTCTTGGCCTCTTTGCTGTGCTaGACCTCAAATGAACTCTGGCTATCTGTTCTAATCTTCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ADGFNLTSLLASLLC*TSNELWLSVLIFWL Trigger: GAGCCAGAAGATTAGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 90 bp | CCTCTCCAAGCTGACGGATTCAATCTGACTTCTCTCTTGGCCTCTTaGCTGTGCTTGACCTCAAATGAACTCTGGCTATCTGTTCTAATC | + |
|
Preference number: 2 (lower is better) Translates to: PLQADGFNLTSLLAS*LCLTSNELWLSVLI Trigger: GATTAGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGCTTGGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGCCTAGAGTGCCTTCAGCCTCAACAGACTGAATTAAGCTCACCCTTTCTATTTCCTTCTACAAACTaGTGTTACCTTGTTTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: PGLECLQPQQTELSSPFLFPSTN*CYLVWD Trigger: ATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAA...TAGAAAGGGTGAGCTTAATTCAGTCTGTTGAGGCTGAAGGCACTCTAGGCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR CCA 90 bp | TATATATCATCTATGTTCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTGTCAACTCAGGTGTTCTaGCTCAAACTCCTCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: YISSMFMHLPSQLSPSSLSTQVF*LKLLSK Trigger: CTTGGAGAGGAGTTTGAGCCAGAACACCTGAGTTGA...CAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGAACATAGATGATATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTTTCCTTCTACAAACTGATGTTACCTTGTTTGGGATTAATGGTGTGTCAGGGCTTCATGAATTCGTaGCTTCAGCAGAGAAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: GVSFYKLMLPCLGLMVCQGFMNS*LQQRKL Trigger: GAGTTTTCTCTGCTGAAGTCACGAATTCATGAAGCC...CTGACACACCATTAATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 90 bp | ATCACCTTCAAACAAGGGTGTTTCCTTCTACAAACTGATGTTACCTaGTTTGGGATTAATGGTGTGTCAGTATTTCAGCCCTCGGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: ITFKQGCFLLQTDVT*FGINGVSVFQPSGL Trigger: TAATCCCGAGGGCTGAAATACTGACACACCATTAATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAACACCCTTGTTTGAAGGTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR TCA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTAGTGCTTGACCTCAAATaGACTCTGGCTATCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: STVQRDFCTEIFTTGTILVLDLK*TLAICS Trigger: AGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCAC...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR GCA 90 bp | TATATATCATCTATGTTCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTGTTTCCCTGTTGCTACTaGTCTCTAGAATCTGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: YISSMFMHLPSQLSPSSLFPCCY*SLESEV Trigger: AACTTCAGATTCTAGAGAGCAGTAGCAACAGGGAAA...CAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGAACATAGATGATATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR TCA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTACGTAAGTGTGCTAAGTaGGGCTCTGAAAAGAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: STVQRDFCTEIFTTGTILRKCAK*GSEKNK Trigger: TTTATTCTTTTCAGAGCCTCACTTAGCACACTTACG...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR GCA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTATATCATCTATGTTCATaGATCTCCCTAGTCAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: STVQRDFCTEIFTTGTILYHLCS*ISLVSY Trigger: ATAGCTGACTAGGGAGATGCATGAACATAGATGATA...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTAGAAACACAGTAAACACCACAATTTaGTGGTTCAGTGAGATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TKGFLYRNIYHRHHTRNTVNTTI*WFSEIK Trigger: TTTGATCTCACTGAACCACCAAATTGTGGTGTTTAC...TGTGTTTCTAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR CCA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTATCTGTTCTAATCTTCTaGCTCATTCTTTCTTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: STVQRDFCTEIFTTGTILSVLIF*LILSSA Trigger: TGCTGAAGAAAGAATGAGCCAGAAGATTAGAACAGA...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCCTTCTACAAACTGATGTTACCTTGTTTGGGATTAATGGTGTGTCAGTAGCTGGTGAGTTAAGATaGTTTATTAGAAAAAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: CFLLQTDVTLFGINGVSVAGELR*FIRKRP Trigger: TGGTCTTTTTCTAATAAAGCATCTTAACTCACCAGC...TACTGACACACCATTAATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR TCA 72 bp | TTCTTTCTTCAGCACGTCTCTGTGCAACTGTGCCAGTaGAGCTGCCTTCTCTGCTGCTCTCAAGAGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FFLQHVSVQLCQ*SCLLCCSQEPL Trigger: GAGAGGCTCTTGAGAGCAGCAGAGAAGGCAGCTTCACTGGCACAGTTGCACAGAGACGTGCTGAAGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 72 bp | TGCATCTCCCTAGTCAGCTATCCCCATCATCACTGGTaGCTCAGGTTGCTGTTTTCCCTGTTGCTACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CISLVSYPHHHW*LRLLFSLLLLL Trigger: GAGCAGTAGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACTAGGGAGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 72 bp | TCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTaGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: SCISLVSYPHHH*WLRLLFSLLLL Trigger: CAGTAGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR GCA 72 bp | CTTCTAGCCTCTGTACAATGTATTCCAGGCCTAGAGTaGCTTCAGCCTCAACAGACTGAATTAAGCTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LLASVQCIPGLE*LQPQQTELSSP Trigger: GGGTGAGCTTAATTCAGTCTGTTGAGGCTGAAGGCACTCTAGGCCTGGAATACATTGTACAGAGGCTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 72 bp | TCTGATCTCCAGCTAGCTGATTCAACTCAGGTGTTCTaGCTCAAACTCCTCTCCAAGCTGACGGATTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: SDLQLADSTQVF*LKLLSKLTDSI Trigger: GATTGAATCCGTCAGCTTGGAGAGGAGTTTGAGCCAGAACACCTGAGTTGAATCAGCTAGCTGGAGATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR TCA 72 bp | TTCTCTCTTGGCCTCTTTGCTGTGCTTGACCTCAAATaGACTCTGGCTATCTGTTCTAATCTTCTGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FSLGLFAVLDLK*TLAICSNLLAH Trigger: ATGAGCCAGAAGATTAGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 72 bp | ACCTCAAATGAACTCTGGCTATCTGTTCTAATCTTCTaGCTCATTCTTTCTTCAGCACGTCTCTGTGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: TSNELWLSVLIF*LILSSARLCAT Trigger: AGTTGCACAGAGACGTGCTGAAGAAAGAATGAGCCAGAAGATTAGAACAGATAGCCAGAGTTCATTTGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CCA 72 bp | TTGGCCTCTTTGCTGTGCTTGACCTCAAATGAACTCTaGCTATCTGTTCTAATCTTCTGGCTCATTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LASLLCLTSNEL*LSVLIFWLILS Trigger: AGAAAGAATGAGCCAGAAGATTAGAACAGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR GCA 72 bp | CAAACAGGTCTTGTTTTTCAAAACCTAAGACTTGGATaGACCAGAGGTAGAGGCACTGAAATGATCAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: QTGLVFQNLRLG*TRGRGTEMIRC Trigger: ACATCTGATCATTTCAGTGCCTCTACCTCTGGTGCATCCAAGTCTTAGGTTTTGAAAAACAAGACCTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTAAGATGTCAAAGTAACTaGTATTCTCCTGATGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: STVQRDFCTEIFTTGTILRCQSN*YSPDVI Trigger: GATGACATCAGGAGAATACAAGTTACTTTGACATCT...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCTATCCCCATCATCACTGGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTCCTTATTTTTCCATTTaGCCTTGCAAACCGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSPSSLVAQVAVFPVAPYFSI*PCKPDL Trigger: CAGGTCCGGTTTGCAAGGGCAAATGGAAAAATAAGG...AGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCTATCCCCATCATCACTGGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTTATAACAAACACGTCTaGAGTGGGGTCATGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLSPSSLVAQVAVFPVAYNKHV*SGVMWK Trigger: CTTCCACATGACCCCACTGCAGACGTGTTTGTTATA...AGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCTATCCCCATCATCACTGGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTTTTCGAGCTCCTTTTTaGCTTCTTCGCTTGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLSPSSLVAQVAVFPVAFRAPF*LLRLNL Trigger: GAGGTTCAAGCGAAGAAGCCAAAAAGGAGCTCGAAA...AGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 72 bp | CCTCTCCAAGCTGACGGATTCAATCTGACTTCTCTCTaGGCCTCTTTGCTGTGCTTGACCTCAAATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQADGFNLTSL*ASLLCLTSNEL Trigger: GAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGCTTGGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCTCCAAGCTGACGGATTCAATCTGACTTCTCTCTTGGCCTCTTTGCTGACGCCGATGCATGTTTaGAGACTGGTAATGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQADGFNLTSLLASLLTPMHV*RLVMRI Trigger: AATCCTCATTACCAGTCTCCAAACATGCATCGGCGT...CAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGCTTGGAGAGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR TCA 90 bp | TATATATCATCTATGTTCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTGTTTGGCTTCTTCGCTTaGACCTCCAAGCCTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: YISSMFMHLPSQLSPSSLFGFFA*TSKPPR Trigger: GCGTGGAGGCTTGGAGGTTCAAGCGAAGAAGCCAAA...CAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGAACATAGATGATATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 72 bp | GCTGACGGATTCAATCTGACTTCTCTCTTGGCCTCTTaGCTGTGCTTGACCTCAAATGAACTCTGGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: ADGFNLTSLLAS*LCLTSNELWLS Trigger: AGATAGCCAGAGTTCATTTGAGGTCAAGCACAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCTCTCCAAGCTGACGGATTCAATCTGACTTCTCTCTTGGCCTCTTTGCTGGGCGTACTGAAGATCTaGATTAAGAATTCCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPLQADGFNLTSLLASLLGVLKI*IKNSFN Trigger: GTTAAAGGAATTCTTAATTCAGATCTTCAGTACGCC...CAGCAAAGAGGCCAAGAGAGAAGTCAGATTGAATCCGTCAGCTTGGAGAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 72 bp | GGTAGAGGCACTGAAATGATCAGATGTCAAAGTAACTaGTATTCTCCTGATGTCATCGTTGTCTCCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGTEMIRCQSN*YSPDVIVVSEA Trigger: TGCCTCGGAGACAACGATGACATCAGGAGAATACAAGTTACTTTGACATCTGATCATTTCAGTGCCTCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR TCA 90 bp | ACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTAGAAACACATGGTCCACAAACGGCTaGCTCTTGGGATGGTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TKGFLYRNIYHRHHTRNTWSTNG*LLGWYR Trigger: ACGATACCATCCCAAGAGTCAGCCGTTTGTGGACCA...TGTGTTTCTAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CCA 90 bp | TATATATCATCTATGTTCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTGTGCAGTGGGGTCATGTaGAAGGATAGTCTTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YISSMFMHLPSQLSPSSLCSGVM*KDSLWF Trigger: GAACCAAAGACTATCCTTCCACATGACCCCACTGCA...CAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGAACATAGATGATATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CCA 90 bp | TATATATCATCTATGTTCATGCATCTCCCTAGTCAGCTATCCCCATCATCACTGCCACTGTATTTCTACTaGCTTCTCCTCCGCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YISSMFMHLPSQLSPSSLPLYFY*LLLRWY Trigger: ATACCAGCGGAGGAGAAGCCAGTAGAAATACAGTGG...CAGTGATGATGGGGATAGCTGACTAGGGAGATGCATGAACATAGATGATATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR GCA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTATTTTCCATTTGCCCTTaGAAACCGGACCTGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: STVQRDFCTEIFTTGTILFSICP*KPDLEY Trigger: GTATTCCAGGTCCGGTTTGCAAGGGCAAATGGAAAA...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| 3UTR CAA 72 bp | AAACAAGGGTGTTTCCTTCTACAAACTGATGTTACCTaGTTTGGGATTAATGGTGTGTCAGTATTTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQGCFLLQTDVT*FGINGVSVFQP Trigger: GGGCTGAAATACTGACACACCATTAATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAACACCCTTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCTTCTACAAACTGATGTTACCTTGTTTGGGATTAATGGTGTGTCAGTACTTGCAAACCGGACCTaGAATACGATCTCTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFLLQTDVTLFGINGVSVLANRT*NTISIF Trigger: GAAAATAGAGATCGTATTCCAGGTCCGGTTTGCAAG...TACTGACACACCATTAATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCTTCTACAAACTGATGTTACCTTGTTTGGGATTAATGGTGTGTCAGTACTCTGGAAGAAAAGATaGGGATCCGTTCCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFLLQTDVTLFGINGVSVLWKKR*GSVPYF Trigger: AAAATAAGGAACGGATCCTCATCTTTTCTTCCAGAG...TACTGACACACCATTAATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR TCA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTAGGTATCGTGGCGTACTaGAGATCTGAATTAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: STVQRDFCTEIFTTGTILGIVAY*RSELRI Trigger: AATTCTTAATTCAGATCTTCAGTACGCCACGATACC...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR GCA 90 bp | AGTACTGTACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTAAATCCGTCTCTTCCTTaGTTTCAGATCTACTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: STVQRDFCTEIFTTGTILNPSLP*FQIYFR Trigger: CCTAAAGTAGATCTGAAAGCAAGGAAGAGACGGATT...TAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGTACAGTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CCA 90 bp | AACACCACAATTTGGTGGTTCAGTGAGATCAAATATCCGTTAACAATCACAAGTTCTTCTTCTATAATCTaGAAGTTCCGGAACCATATC | + |
|
Preference number: 4 (lower is better) Translates to: NTTIWWFSEIKYPLTITSSSSII*KFRNHI Trigger: GATATGGTTCCGGAACTTCCAGATTATAGAAGAAGA...ACTTGTGATTGTTAACGGATATTTGATCTCACTGAACCACCAAATTGTGGTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 90 bp | TCTATTTTCCTCCTCCGCCTCTTTGGCCACATCGGCCTGCTTAGCTaGCTGCCCGGCATCTTTCGAGCTCCTTTTTGGCTTCTTCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIFLLRLFGHIGLLS*LPGIFRAPFWLLRL Trigger: CAAGCGAAGAAGCCAAAAAGGAGCTCGAAAGATGCCGGGCAGCCAGCTAAGCAGGCCGATGTGGCCAAAGAGGCGGAGGAGGAAAATAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022855.12 ENSMUST00000168761.2 ENSMUST00000169050.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGCTATCCCCATCATCACTGGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTTTTTGGCTTCTTCGCTaGAACCTCCAAGCCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SQLSPSSLVAQVAVFPVAFWLLR*NLQAST Trigger: CGTGGAGGCTTGGAGGTTCAAGCGAAGAAGCCAAAA...AGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 90 bp | AGGCTCTGGTTTCACCCACTGTATTTCTACTGGCTTCTCCTCCGCTaGTATAACAAACACGTCTGCAGTGGGGTCATGTGGAAGGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLWFHPLYFYWLLLR*YNKHVCSGVMWKDS Trigger: ACTATCCTTCCACATGACCCCACTGCAGACGTGTTTGTTATACCAGCGGAGGAGAAGCCAGTAGAAATACAGTGGGTGAAACCAGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CAA 90 bp | CCAGGCCTAGAGTGCCTTCAGCCTCAACAGACTGAATTAAGCTCACCCTTTCTACTTTCGAGCTCCTTTTaGGCTTCTTCGCTTGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLECLQPQQTELSSPFLLSSSF*ASSLEP Trigger: AGGTTCAAGCGAAGAAGCCAAAAAGGAGCTCGAAAG...TAGAAAGGGTGAGCTTAATTCAGTCTGTTGAGGCTGAAGGCACTCTAGGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CAA 90 bp | AGTCAGCTATCCCCATCATCACTGGTGGCTCAGGTTGCTGTTTTCCCTGTTGCTTCTGCTCATCTTCTGTaGCAGTTTCCGATGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQLSPSSLVAQVAVFPVASAHLL*QFPMPF Trigger: AAAAGGCATCGGAAACTGCAACAGAAGATGAGCAGA...AGCAACAGGGAAAACAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 90 bp | TTTCAGATCTACTTTAGGCTCTGGTTTCACCCACTGTATTTCTACTaGCTTCTCCTCCGCTGGTATAACAAACACGTCTGCAGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQIYFRLWFHPLYFY*LLLRWYNKHVCSGV Trigger: GACCCCACTGCAGACGTGTTTGTTATACCAGCGGAGGAGAAGCCAGTAGAAATACAGTGGGTGAAACCAGAGCCTAAAGTAGATCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS GCA 90 bp | CTGTATTTCTACTGGCTTCTCCTCCGCTGGTATAACAAACACGTCTaGAGTGGGGTCATGTGGAAGGATAGTCTTTGGTTCTTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYFYWLLLRWYNKHV*SGVMWKDSLWFFLP Trigger: AGGAAGAAAGAACCAAAGACTATCCTTCCACATGACCCCACTGCAGACGTGTTTGTTATACCAGCGGAGGAGAAGCCAGTAGAAATACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 90 bp | GAAGGAATTTATAGTTACACCAAAAAGACTCTTGCAAACCGGACCTaGAATACGATCTCTATTTTCCTCCTCCGCCTCTTTGGCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: EGIYSYTKKTLANRT*NTISIFLLRLFGHI Trigger: GATGTGGCCAAAGAGGCGGAGGAGGAAAATAGAGATCGTATTCCAGGTCCGGTTTGCAAGAGTCTTTTTGGTGTAACTATAAATTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168761.2 ENSMUST00000169050.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTTTCCTTCTACAAACTGATGTTACCTTGTTTGGGATTAATGGTGTGTCAGGACCATGAGGTGAATTaGAAAGCCACATATAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GVSFYKLMLPCLGLMVCQDHEVN*KATYRD Trigger: ATCTCTATATGTGGCTTTCAAATTCACCTCATGGTC...CTGACACACCATTAATCCCAAACAAGGTAACATCAGTTTGTAGAAGGAAACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGGATTTCTGTACAGAAATATTTACCACAGGCACCATACTAGAAACACACAGGGTATGAATATTTaGAACCAAGAATTTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKGFLYRNIYHRHHTRNTQGMNI*NQEFGR Trigger: TCTGCCAAATTCTTGGTTCAAAATATTCATACCCTG...TGTGTTTCTAGTATGGTGCCTGTGGTAAATATTTCTGTACAGAAATCCCTTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS GCA 72 bp | CTATTTTCCTCCTCCGCCTCTTTGGCCACATCGGCCTaGTTAGCTGGCTGCCCGGCATCTTTCGAGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFSSSASLATSA*LAGCPASFELL Trigger: AAGGAGCTCGAAAGATGCCGGGCAGCCAGCTAAGCAGGCCGATGTGGCCAAAGAGGCGGAGGAGGAAAATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022855.12 ENSMUST00000168761.2 ENSMUST00000169050.8 |
||
| CDS TCA 72 bp | CCGGCATCTTTCGAGCTCCTTTTTGGCTTCTTCGCTTaGACCTCCAAGCCTCCACGCCGCTTTCTCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PASFELLFGFFA*TSKPPRRFLLV Trigger: GACCAAGAGAAAGCGGCGTGGAGGCTTGGAGGTTCAAGCGAAGAAGCCAAAAAGGAGCTCGAAAGATGCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022855.12 ENSMUST00000168761.2 ENSMUST00000169050.8 |
||
| CDS CAA 72 bp | CCCGGCATCTTTCGAGCTCCTTTTTGGCTTCTTCGCTaGAACCTCCAAGCCTCCACGCCGCTTTCTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGIFRAPFWLLR*NLQASTPLSLG Trigger: ACCAAGAGAAAGCGGCGTGGAGGCTTGGAGGTTCAAGCGAAGAAGCCAAAAAGGAGCTCGAAAGATGCCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022855.12 ENSMUST00000168761.2 ENSMUST00000169050.8 |
||
| CDS TCA 72 bp | AGAATGGTGAACGTAAACACGTGGTCCACAAACGGCTaGCTCTTGGGATGGTATCGTGGCGTACTGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: RMVNVNTWSTNG*LLGWYRGVLKI Trigger: GATCTTCAGTACGCCACGATACCATCCCAAGAGTCAGCCGTTTGTGGACCACGTGTTTACGTTCACCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS GCA 72 bp | TACTGGCTTCTCCTCCGCTGGTATAACAAACACGTCTaGAGTGGGGTCATGTGGAAGGATAGTCTTTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: YWLLLRWYNKHV*SGVMWKDSLWF Trigger: GAACCAAAGACTATCCTTCCACATGACCCCACTGCAGACGTGTTTGTTATACCAGCGGAGGAGAAGCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 72 bp | TTTCACCCACTGTATTTCTACTGGCTTCTCCTCCGCTaGTATAACAAACACGTCTGCAGTGGGGTCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FHPLYFYWLLLR*YNKHVCSGVMW Trigger: CCACATGACCCCACTGCAGACGTGTTTGTTATACCAGCGGAGGAGAAGCCAGTAGAAATACAGTGGGTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 72 bp | TACTTTAGGCTCTGGTTTCACCCACTGTATTTCTACTaGCTTCTCCTCCGCTGGTATAACAAACACGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YFRLWFHPLYFY*LLLRWYNKHVC Trigger: GCAGACGTGTTTGTTATACCAGCGGAGGAGAAGCCAGTAGAAATACAGTGGGTGAAACCAGAGCCTAAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 72 bp | CGCTGGTATAACAAACACGTCTGCAGTGGGGTCATGTaGAAGGATAGTCTTTGGTTCTTTCTTCCTCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RWYNKHVCSGVM*KDSLWFFLPQF Trigger: AAACTGAGGAAGAAAGAACCAAAGACTATCCTTCCACATGACCCCACTGCAGACGTGTTTGTTATACCAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 72 bp | TTCCTTATTTTTCCATTTGCCCTTGCAAACCGGACCTaGAATACGATCTCTATTTTCCTCCTCCGCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLIFPFALANRT*NTISIFLLRLF Trigger: AAAGAGGCGGAGGAGGAAAATAGAGATCGTATTCCAGGTCCGGTTTGCAAGGGCAAATGGAAAAATAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||
| CDS CCA 72 bp | TATAGTTACACCAAAAAGACTCTTGCAAACCGGACCTaGAATACGATCTCTATTTTCCTCCTCCGCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YSYTKKTLANRT*NTISIFLLRLF Trigger: AAAGAGGCGGAGGAGGAAAATAGAGATCGTATTCCAGGTCCGGTTTGCAAGAGTCTTTTTGGTGTAACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168761.2 ENSMUST00000169050.8 |
||
| CDS CAA 72 bp | GAAGAAAAGATGAGGATCCGTTCCTTATTTTTCCATTaGCCCTTGCAAACCGGACCTGGAATACGATCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: EEKMRIRSLFFH*PLQTGPGIRSL Trigger: TAGAGATCGTATTCCAGGTCCGGTTTGCAAGGGCAAATGGAAAAATAAGGAACGGATCCTCATCTTTTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022855.12 |
||