Pregenerated sensors for BRIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034329Ensembl transcript IDs: ENSMUST00000044423.4
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCAGGAAGCAGGAGCTGATGCAGAGGTCATGGAGGGATGTTACTaGCTTGCTTTCCCTAGCTTGCTCAGCTTGCTTTTAGAACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GQEAGADAEVMEGCY*LAFPSLLSLLLEPK Trigger: CTTGGGTTCTAAAAGCAAGCTGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTCCTGCTTCCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR TCA 90 bp | AGACTCAGAGTGAGAAGCCTGATTAAATCAGCTTGGAGAGGAGTTTaGGCCAGAAAAGCTGAGTTGACTCAGCCAGCCAGAGGTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RLRVRSLIKSAWRGV*ARKAELTQPARGQK Trigger: TTTCTGACCTCTGGCTGGCTGAGTCAACTCAGCTTTTCTGGCTCAAACTCCTCTCCAAGCTGATTTAATCAGGCTTCTCACTCTGAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR GCA 90 bp | AACTTTATACTAGAATGTATGTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACACCATGACCAAGAAGCAAGTAGGGGAGGAAAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: NFILECMCLSQGFYS*TNTMTKKQVGEERV Trigger: AACCCTTTCCTCCCCTACTTGCTTCTTGGTCATGGTGTTTGTGCAGGAATAGAAACCCTGACTAAGACACATACATTCTAGTATAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGCTTCCAGCCCAGGGATaGCACCACCCACAATGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQLPAQG*HHPQWA Trigger: GGCCCATTGTGGGTGGTGCCATCCCTGGGCTGGAAG...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCATGGAGGCCAGAGGTTaGGGCACATCACTTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: ELMQRSWRDVTGLLSLACMEARG*GTSLSM Trigger: CATAGAAAGTGATGTGCCTCAACCTCTGGCCTCCAT...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGTGGCACCACCCACAATaGGCCTTCCCACCTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQWHHPQ*AFPPLI Trigger: GATCAAAGGTGGGAAGGCCCATTGTGGGTGGTGCCA...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR TCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGAGTGCTCTTAACCACTaGGCCATCTCTCCATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NYLPEQCGEEEAARRFYQSALNH*AISPSS Trigger: TGAGGATGGAGAGATGGCTCAGTGGTTAAGAGCACT...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGCAGTCTTCCTCGTGCTaGGATAGTAGCTGTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: HFHIAVHHQRKSGLELKQQSSSC*DSSCVL Trigger: GAGCACACAGCTACTATCCCAGCACGAGGAAGACTG...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTACAGCTGGATCTCATaGAGTCATTTCCTCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ELMQRSWRDVTGLLSLACYSWIS*SHFLKG Trigger: TCCCTTGAGGAAATGACTCCATGAGATCCAGCTGTA...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCGAGCTACCATGTAGTTaGTGGAATTTGAACTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ELMQRSWRDVTGLLSLACELPCS*WNLNSR Trigger: TCTGGAGTTCAAATTCCAGCAACTACATGGTAGCTC...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR CAA 90 bp | GGTTGTGAGCTACCATGTAGTTGCTGGAATTTGAACTCCAGACCTTaGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: GCELPCSCWNLNSRP*EEQSVLLTTEPSLH Trigger: ATGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAACTACATGGTAGCTCACAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR TCA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGTCTCTTCCACTGGTGTaGCTCCATTCAACTATGTGT | + |
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Preference number: 2 (lower is better) Translates to: YYVDQDGLKHIESCLCPKSLPLV*LHSTMC Trigger: ACACATAGTTGAATGGAGTCACACCAGTGGAAGAGA...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR CAA 90 bp | AAGCAAGTAGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATaGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KQVGEERVYSAYTST*LFITKGSQDWNSSR Trigger: CCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCTACTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR CAA 90 bp | GCTTGTGTCAAATTGACACACAAAACCAGCCAGTACAGTATGTCTTaGGTACTGCTAGGATCTGTGTATTTGCGTATGGAGGCCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: ACVKLTHKTSQYSMS*VLLGSVYLRMEARG Trigger: ACCTCTGGCCTCCATACGCAAATACACAGATCCTAGCAGTACCAAAGACATACTGTACTGGCTGGTTTTGTGTGTCAATTTGACACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGAAAATGCCTTACAGCTaGATCTCATGGAGTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: NYLPEQCGEEEAARRFYQKMPYS*ISWSHF Trigger: GAAATGACTCCATGAGATCCAGCTGTAAGGCATTTT...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGTAGTTGCTGGAATTTaGACTCCAGACCTTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RGGKGLFSLHFHIAVHHQVVAGI*TPDLWK Trigger: CTTCCAAAGGTCTGGAGTTCAAATTCCAGCAACTAC...TTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR TCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGTTGCCAAAGTTAATATaGGGTCAAACAGAGCAATTC | + |
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Preference number: 2 (lower is better) Translates to: NYLPEQCGEEEAARRFYQLPKLI*GQTEQF Trigger: GAATTGCTCTGTTTGACCTCATATTAACTTTGGCAA...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCTACCATGTAGTTGCTaGAATTTGAACTCCAGACCT | + |
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Preference number: 2 (lower is better) Translates to: LMREERETTYQNSVVRKKLPCSC*NLNSRP Trigger: AGGTCTGGAGTTCAAATTCCAGCAACTACATGGTAG...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGCATATGGCTAAAGTGTaGCTAGATTTAAATGAGATC | + |
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Preference number: 2 (lower is better) Translates to: HFHIAVHHQRKSGLELKQHMAKV*LDLNEI Trigger: GATCTCATTTAAATCTAGCCACACTTTAGCCATATG...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR CAA 90 bp | TTTGGTACTGCTAGGATCTGTGTATTTGCGTATGGAGGCCAGAGGTaGAGGCACATCACTTTCTATGAGGACAGTAAAGTGAAATTATTA | + |
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Preference number: 2 (lower is better) Translates to: FGTARICVFAYGGQR*RHITFYEDSKVKLL Trigger: TAATAATTTCACTTTACTGTCCTCATAGAAAGTGATGTGCCTCAACCTCTGGCCTCCATACGCAAATACACAGATCCTAGCAGTACCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR GCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGTTTATAATATGTAGGTaGACTGTAGCTGTCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LMREERETTYQNSVVRKKFIICR*TVAVFR Trigger: TCTGAAGACAGCTACAGTGCACCTACATATTATAAA...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR GCA 72 bp | GCCCGCCAGCATCAGCTAATCCCAGGGAGCCCCCACTaGTTACAGGCCCTCGTGTCTATTCAAGAGTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: ARQHQLIPGSPH*LQALVSIQEFP Trigger: GGGAAACTCTTGAATAGACACGAGGGCCTGTAAGCAGTGGGGGCTCCCTGGGATTAGCTGATGCTGGCGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR CCA 72 bp | AAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGTCATaGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: KQVRKQELMQRS*RDVTGLLSLAC Trigger: GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTCCTGCTTCCTGACCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR TCA 72 bp | CAGCTTGGAGAGGAGTTTGAGCCAGAAAAGCTGAGTTaGCTCAGCCAGCCAGAGGTCAGAAAGAACTCGGAA | + |
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Preference number: 3 (lower is better) Translates to: QLGEEFEPEKLS*LSQPEVRKNSE Trigger: TTCCGAGTTCTTTCTGACCTCTGGCTGGCTGAGTCAACTCAGCTTTTCTGGCTCAAACTCCTCTCCAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR CCA 72 bp | GCAGGAGCTGATGCAGAGGTCATGGAGGGATGTTACTaGCTTGCTTTCCCTAGCTTGCTCAGCTTGCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: AGADAEVMEGCY*LAFPSLLSLLL Trigger: TAAAAGCAAGCTGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CAA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGTTGAACTCCAGACCTTaGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: YYVDQDGLKHIESCLCPKLNSRP*EEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAA...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCCTAGCTTGTGTCAAATaGACACACAAAACCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ELMQRSWRDVTGLLSLACLACVK*THKTSQ Trigger: CTGGCTGGTTTTGTGTGTCAATTTGACACAAGCTAG...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CAA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGCCTAGCTTGCTCAGCTaGCTTTTAGAACCCAAGACT | + |
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Preference number: 3 (lower is better) Translates to: YYVDQDGLKHIESCLCPKPSLLS*LLEPKT Trigger: AGTCTTGGGTTCTAAAAGCAAGCTGAGCAAGCTAGG...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR TCA 72 bp | TATACAAGTTGCCAGCGCTGCTCTCTTCCACTGGTGTaGCTCCATTCAACTATGTGTCTGTGCAACCTTCGA | + |
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Preference number: 3 (lower is better) Translates to: YTSCQRCSLPLV*LHSTMCLCNLR Trigger: TCGAAGGTTGCACAGACACATAGTTGAATGGAGTCACACCAGTGGAAGAGAGCAGCGCTGGCAACTTGTATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CAA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGATTCACTTATACAAGTaGCCAGCGCTGCTCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: HFHIAVHHQRKSGLELKQIHLYK*PALLSS Trigger: GGAAGAGAGCAGCGCTGGCAACTTGTATAAGTGAAT...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCTACCATGTAGTTGCTGGAATTTaGACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMVVSYHVVAGI*TPDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAACTACATGGTAGCTCACAACCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CAA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGTGTAGTTGCTGGAATTaGAACTCCAGACCTTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: HFHIAVHHQRKSGLELKQCSCWN*NSRPLE Trigger: TTCCAAAGGTCTGGAGTTCAAATTCCAGCAACTACA...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CAA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGTATGGAGGCCAGAGGTaGAGGCACATCACTTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: LMREERETTYQNSVVRKKYGGQR*RHITFY Trigger: ATAGAAAGTGATGTGCCTCAACCTCTGGCCTCCATA...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR GCA 72 bp | GGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTaGTGTTCATCACCAAAGGAAGTCAGGACTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: GRKGFIQLTLPH*CSSPKEVRTGT Trigger: AGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR GCA 72 bp | GATCTTGTTACAGATGGTTGTGAGCTACCATGTAGTTaGTGGAATTTGAACTCCAGACCTTTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLVTDGCELPCS*WNLNSRPLEEQ Trigger: CTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAACTACATGGTAGCTCACAACCATCTGTAACAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR GCA 72 bp | CTAGAATGTATGTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACACCATGACCAAGAAGCAAGTAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LECMCLSQGFYS*TNTMTKKQVGE Trigger: CTCCCCTACTTGCTTCTTGGTCATGGTGTTTGTGCAGGAATAGAAACCCTGACTAAGACACATACATTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR-3UTR CAA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGTGTGATAACTCTAGCTaGTGTCAAATTGACACACAA | + |
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Preference number: 3 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQCDNSS*CQIDTQ Trigger: TTGTGTGTCAATTTGACACAAGCTAGAGTTATCACA...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| 3UTR TCA 72 bp | AGAAGGAGGCACCCATGTTTGAAAGTGATGTCTAATTaGGTGGCAGACAAAGTTATGAATCAGAGAAACATT | + |
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Preference number: 3 (lower is better) Translates to: RRRHPCLKVMSN*VADKVMNQRNI Trigger: AATGTTTCTCTGATTCATAACTTTGTCTGCCACTCAATTAGACATCACTTTCAAACATGGGTGCCTCCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR TCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGCTCTGGACATGCCCTaGAGGTGCTGCAGTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NYLPEQCGEEEAARRFYQALDMP*RCCSVC Trigger: GCAGACACTGCAGCACCTTCAGGGCATGTCCAGAGC...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR TCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGCCGACCCTTAGGGCCTaGGCCAACAGTACCAACCCA | + |
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Preference number: 4 (lower is better) Translates to: NYLPEQCGEEEAARRFYQPTLRA*ANSTNP Trigger: TGGGTTGGTACTGTTGGCTCAGGCCCTAAGGGTCGG...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR TCA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGGCCACCTGGGGACACTaGAGCTCCTGGACACACACT | + |
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Preference number: 4 (lower is better) Translates to: YYVDQDGLKHIESCLCPKATWGH*SSWTHT Trigger: AGTGTGTGTCCAGGAGCTTCAGTGTCCCCAGGTGGC...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR TCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCACGGGCGTTATCATCTaGGAAATCCAGACCCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: ELMQRSWRDVTGLLSLACTGVII*EIQTLA Trigger: AGCGAGGGTCTGGATTTCTCAGATGATAACGCCCGT...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGCCCACCACTTCAGGATaGACACAGCTGTGGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NYLPEQCGEEEAARRFYQPTTSG*TQLWSL Trigger: CAGGGACCACAGCTGTGTCCATCCTGAAGTGGTGGG...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTTGAGCTGGGACACTTaGCTTCTTCAGTTCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: ELMQRSWRDVTGLLSLACLSWDT*LLQFLA Trigger: CGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAA...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR TCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCAGTTTCCTCCCGAGGCTaGCTAGTTCTTCTATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSVSSRG*LVLLCP Trigger: GGGACATAGAAGAACTAGTCAGCCTCGGGAGGAAAC...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR TCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGAAGCTTGAGTGGTGCTaGATCTGCTGCCTCACCCAT | + |
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Preference number: 4 (lower is better) Translates to: NYLPEQCGEEEAARRFYQKLEWC*ICCLTH Trigger: ATGGGTGAGGCAGCAGATTCAGCACCACTCAAGCTT...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR TCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCATTCAGCAGCTTTGTTTaGGCTGGGACACTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSFSSFV*AGTLGF Trigger: GAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAA...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCAGGCCATCCACATTTTaGAAAGAGTCTTTCCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ELMQRSWRDVTGLLSLACRPSTF*KESFLS Trigger: CGACAGGAAAGACTCTTTTCAAAATGTGGATGGCCT...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGCTCTACAGGGAAAGTaGATCTTCACCCCACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HFHIAVHHQRKSGLELKQALQGK*IFTPPM Trigger: CATCGGTGGGGTGAAGATCCACTTTCCCTGTAGAGC...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGCAGAACAGCAGCACCTaGAACAAAGGCCATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NYLPEQCGEEEAARRFYQQNSST*NKGHPH Trigger: ATGTGGATGGCCTTTGTTCCAGGTGCTGCTGTTCTG...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGAATTTGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACCTATGTCCCAGGCTCTaGACATGCCCTGAAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEFELQTFGRAVSALNHLCPRL*TCPEGA Trigger: AGCACCTTCAGGGCATGTCCAGAGCCTGGGACATAG...GTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCCACTTTTCTTCCTTCTaGAAACACCGTGGCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ELMQRSWRDVTGLLSLACHFSSF*KHRGLL Trigger: TAGCAAGCCACGGTGTTTCCAGAAGGAAGAAAAGTG...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCACAGCTTTGTTTGAGCTaGGACACTTGGCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSQLCLS*DTWLLQ Trigger: CTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTG...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| 3UTR CAA 72 bp | GTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTaGCTCAGCTTGCTTTTAGAACCCAAGACTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VMEGCYWLAFPS*LSLLLEPKTSS Trigger: GCTGGAAGTCTTGGGTTCTAAAAGCAAGCTGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCACTATTGAAATGAGGTaGAGTGTCCAGGTTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELMQRSWRDVTGLLSLACTIEMR*SVQVCV Trigger: GACACAAACCTGGACACTTCACCTCATTTCAATAGT...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGCTTGGGGTTCTGCAATaGCTGTCTTCACTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFHIAVHHQRKSGLELKQLGVLQ*LSSLTP Trigger: TGGAGTCAGTGAAGACAGTCATTGCAGAACCCCAAG...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGGTCTTGACAGGGAGTTaGGACTCCATTTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQVLTGS*DSISSR Trigger: TCTGGAAGAAATGGAGTCTCAACTCCCTGTCAAGAC...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGAATTTGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACTACACTGTAGCTTGCTaGTTCCCGAGCACAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEFELQTFGRAVSALNHYTVAC*FPSTVF Trigger: GAAGACTGTGCTCGGGAATCAGCAAGCTACAGTGTA...GTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGGGCACTTGCAAAGCTTaGGTGGTGCTGAATCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKGTCKA*VVLNLL Trigger: CAGCAGATTCAGCACCACTCAAGCTTTGCAAGTGCC...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGATTATGACTTCTGACTaGAGGCAAGGTCCCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YYVDQDGLKHIESCLCPKIMTSD*RQGPSD Trigger: ATCACTGGGACCTTGCCTTCAGTCAGAAGTCATAAT...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCATCACTGGTGAAATTATaGCTTCTGACTGAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSSLVKL*LLTEGK Trigger: CTTGCCTTCAGTCAGAAGTCATAATTTCACCAGTGA...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR GCA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGGCTGAGAGATGCCTCTaGAAAACTGGAAAAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQAERCL*KTGKVA Trigger: GGCTACTTTTCCAGTTTTGCAGAGGCATCTCTCAGC...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR GCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCACCCCAATCATTTTTGTaGCGAATACATCTGCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSPQSFL*RIHLPR Trigger: TCTAGGCAGATGTATTCGGCACAAAAATGATTGGGG...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGTCCAGCAAACAGTGTTaGCTGCTGTTTAGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQSSKQC*LLFSPL Trigger: CAGAGGACTAAACAGCAGCCAACACTGTTTGCTGGA...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGAATTTGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACCTTTCTGGTGTCTTCTaGAGAACTCGGTCAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLEFELQTFGRAVSALNHLSGVF*RTRSAT Trigger: AGTCGCTGACCGAGTTCTCCAGAAGACACCAGAAAG...GTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | AGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAAGCTCCCTGGTAATCTaGGCAATCTGCTTGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGGKGLFSLHFHIAVHHQSSLVI*AICLCV Trigger: GACACACAAGCAGATTGCTCAGATTACCAGGGAGCT...TTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGTTTTTGAAGAACAGCTaGGAGATGCCTCTGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NYLPEQCGEEEAARRFYQFLKNS*EMPLQN Trigger: GTTTTGCAGAGGCATCTCTCAGCTGTTCTTCAAAAA...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCAACTTTCTCTTCTTTTTaGAGAACAGCTGAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSTFSSF*RTAERC Trigger: GCATCTCTCAGCTGTTCTTCAAAAAGAAGAGAAAGT...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGACCAACCCAAACCTGTaGGTTACTGATGACATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HFHIAVHHQRKSGLELKQTNPNL*VTDDMV Trigger: AACCATGTCATCAGTAACTCACAGGTTTGGGTTGGT...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGAATGTTTCAGTATGCTaGAAGGTAGCGCAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: YYVDQDGLKHIESCLCPKNVSVC*KVAQRF Trigger: GAATCTCTGCGCTACCTTTCAGCATACTGAAACATT...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR GCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCATCACTAAGAGATTGCTaGCATGCTAATGCAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSSLRDC*HANAEQ Trigger: TTGTTCTGCATTAGCATGGCAGCAATCTCTTAGTGA...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGTCTTCACCCCACCGATaGTGTAGTCAGACAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKSSPHR*CSQTTL Trigger: CAGTGTTGTCTGACTACACCATCGGTGGGGTGAAGA...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCAGTATTTGCAGGCTCTTaGTTGTTTCCTTGTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSVFAGS*LFPCLA Trigger: TGCTAAACAAGGAAACAACCAAGAGCCTGCAAATAC...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGATGGACACAGCTGTaGTCCCTGCTGGAAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: RGGKGLFSLHFHIAVHHQGWTQL*SLLERI Trigger: TATTCTTTCCAGCAGGGACCACAGCTGTGTCCATCC...TTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGATGCCTCTGCAAAACTaGAAAAGTAGCCGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFHIAVHHQRKSGLELKQMPLQN*KSSRGD Trigger: ATCACCACGGCTACTTTTCCAGTTTTGCAGAGGCAT...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| 3UTR CAA 72 bp | TCAAGAGTTTCCCCAGATCTAATTCACTTATACAAGTaGCCAGCGCTGCTCTCTTCCACTGGTGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRVSPDLIHLYK*PALLSSTGVTP Trigger: TGGAGTCACACCAGTGGAAGAGAGCAGCGCTGGCAACTTGTATAAGTGAATTAGATCTGGGGAAACTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCTACCATGTAGTTGCTGGAATTaGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCELPCSCWN*NSRPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAACTACATGGTAGCTCACAACCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| 3UTR CAA 72 bp | GGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATaGCTGTTCATCACCAAAGGAAGTCAGGACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GEERVYSAYTST*LFITKGSQDWN Trigger: GTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCATACCATGGATTGGTGTaGCTTTCTCTTCTTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMQRSWRDVTGLLSLACSYHGLV*LSLLFE Trigger: TTCAAAAAGAAGAGAAAGTCACACCAATCCATGGTA...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGAATTTGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACCTGGACACACACTTCTaGTTCTTCTGTCGAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEFELQTFGRAVSALNHLDTHF*FFCRVF Trigger: GAAAACTCGACAGAAGAAGCAGAAGTGTGTGTCCAG...GTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGAATTTGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACGCCTCCTCTTTACCATaGATTGGTGTGACTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEFELQTFGRAVSALNHASSLP*IGVTFS Trigger: AGAGAAAGTCACACCAATCCATGGTAAAGAGGAGGC...GTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGACTTCTCCTTTCTGTTaGAATTCCCCACCACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKTSPFC*NSPPLQ Trigger: CTGAAGTGGTGGGGAATTTCAACAGAAAGGAGAAGT...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGAGCTTCATCTAAAATaGCAACTTGTCCTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFHIAVHHQRKSGLELKQELHLK*QLVLSA Trigger: AGCTGAAAGGACAAGTTGTCATTTTAGATGAAGCTC...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGCAGTCTTCAATGTTGTaGGCTTCATCTAAAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: YYVDQDGLKHIESCLCPKQSSML*ASSKMT Trigger: TGTCATTTTAGATGAAGCTCACAACATTGAAGACTG...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGTTTGTCATTAATATCTaGAAAGGCCACAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YYVDQDGLKHIESCLCPKFVINI*KGHSWI Trigger: AATCCAGCTGTGGCCTTTTCAGATATTAATGACAAA...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGGCAAAGCAGTTTTATTaGAAGTGGAAGAACCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKAKQFY*KWKNQG Trigger: CCCCTGGTTCTTCCACTTTCAATAAAACTGCTTTGC...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGAATTTGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACCTGCCCAAATCCAGTTaGAGTTTCAAAAAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEFELQTFGRAVSALNHLPKSS*SFKKLF Trigger: GAAGAGCTTTTTGAAACTGCAACTGGATTTGGGCAG...GTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGTTTTTCCACTTCCTGTaGGACTCTCCAGCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKFFHFL*DSPANS Trigger: ACTGTTTGCTGGAGAGTCCCACAGGAAGTGGAAAAA...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGCTCGATTTTGAGTGGTaGTCATTGTATTGTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NYLPEQCGEEEAARRFYQLDFEW*SLYCRF Trigger: AAAACGACAATACAATGACCACCACTCAAAATCGAG...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGAAGACCTCTCGATTTTaGGTGGTGGTCATTGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKKTSRF*VVVIVL Trigger: CAATACAATGACCACCACTCAAAATCGAGAGGTCTT...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR GCA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGAATAGGGATTTGTATTaGCTCCTCTTTACCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQNRDLY*LLFTMD Trigger: ATCCATGGTAAAGAGGAGGCAATACAAATCCCTATT...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGCTCTTTACCATGGATTaGTGTGACTTTCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HFHIAVHHQRKSGLELKQLFTMD*CDFLFF Trigger: AAAGAAGAGAAAGTCACACCAATCCATGGTAAAGAG...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAACCTCTCGATTTTGAGTaGTGGTCATTGTATTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RGGKGLFSLHFHIAVHHQPLDFE*WSLYCR Trigger: ACGACAATACAATGACCACCACTCAAAATCGAGAGG...TTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CCA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGACAGTTACCTGTGAGTaGCAAAGCAGTTTTATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HFHIAVHHQRKSGLELKQTVTCE*QSSFIE Trigger: TTCAATAAAACTGCTTTGCCACTCACAGGTAACTGT...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR GCA 90 bp | AGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAATTCTCACTAAGAGATTaGTGCCATGCTAATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGGKGLFSLHFHIAVHHQFSLRD*CHANAE Trigger: TTCTGCATTAGCATGGCAGCAATCTCTTAGTGAGAA...TTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR GCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGATTCAAGGCTCGGTATaGTTGAATTTCATACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKIQGSV*LNFIPL Trigger: CAGTGGTATGAAATTCAAGCATACCGAGCCTTGAAT...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CCA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGATTCCCACTTCATCCTaGAACTCAAATGTTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMREERETTYQNSVVRKKIPTSS*NSNVSV Trigger: TACTGAAACATTTGAGTTCCAGGATGAAGTGGGAAT...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 90 bp | TCCCGTGCTTGCCATCCAGCAGCTCCATGCACTTCTCCTTTCTGTTaGAATTCCCCACCACTTCAGGATGGACACAGCTGTGGTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRACHPAAPCTSPFC*NSPPLQDGHSCGPC Trigger: GCAGGGACCACAGCTGTGTCCATCCTGAAGTGGTGGGGAATTTCAACAGAAAGGAGAAGTGCATGGAGCTGCTGGATGGCAAGCACGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 90 bp | GACACAGCTGTGGTCCCTGCTGGAAAGAATAGTCATCGGGACCCCTaGGTAAGCTGTCTTACGGAGCTCCCTGGTAATCTGAGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DTAVVPAGKNSHRDP*VSCLTELPGNLSNL Trigger: CAGATTGCTCAGATTACCAGGGAGCTCCGTAAGACAGCTTACTCAGGGGTCCCGATGACTATTCTTTCCAGCAGGGACCACAGCTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCCGGTTACACTGTAGCTaGCTGATTCCCGAGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELMQRSWRDVTGLLSLACRLHCS*LIPEHS Trigger: ACTGTGCTCGGGAATCAGCAAGCTACAGTGTAACCG...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTTTGAGCTGGGACACTaGGCTTCTTCAGTTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ELMQRSWRDVTGLLSLACFELGH*ASSVPG Trigger: GCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAA...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 90 bp | CTCGAGCTGTATAGTAGGGACAAGCTTTCAGTTTCCTCCCGAGGCTaGCTAGTTCTTCTATGTCCCAGGCTCTGGACATGCCCTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LELYSRDKLSVSSRG*LVLLCPRLWTCPEG Trigger: ACCTTCAGGGCATGTCCAGAGCCTGGGACATAGAAGAACTAGTCAGCCTCGGGAGGAAACTGAAAGCTTGTCCCTACTATACAGCTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 90 bp | TGGGAAAGGAATCCCTACGGTTATGACAGCACGGGCGTTATCATCTaGGAAATCCAGACCCTCGCTCACCTTGCCACGACAGACTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: WERNPYGYDSTGVII*EIQTLAHLATTDCY Trigger: ATAGCAGTCTGTCGTGGCAAGGTGAGCGAGGGTCTGGATTTCTCAGATGATAACGCCCGTGCTGTCATAACCGTAGGGATTCCTTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCTGTTTCAGCAGCTTaGTTTGAGCTGGGACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ELMQRSWRDVTGLLSLACSVSAA*FELGHL Trigger: CAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGA...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 90 bp | CCACCTGAAGATCCTTCACATTTGGGAAAGGAATCCCTACGGTTATaGCAGCACGGGCGTTATCATCTGAGAAATCCAGACCCTCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPEDPSHLGKESLRL*QHGRYHLRNPDPRS Trigger: TGAGCGAGGGTCTGGATTTCTCAGATGATAACGCCCGTGCTGTCATAACCGTAGGGATTCCTTTCCCAAATGTGAAGGATCTTCAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGGGCACTTGCAAAGCTaGAGTGGTGCTGAATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HFHIAVHHQRKSGLELKQGHLQS*SGAESA Trigger: AGCAGATTCAGCACCACTCAAGCTTTGCAAGTGCCC...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGGCGACTCCAGGGCACTaGCAAAGCTTGAGTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LMREERETTYQNSVVRKKATPGH*QSLSGA Trigger: AGCACCACTCAAGCTTTGCAAGTGCCCTGGAGTCGC...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 90 bp | CATCATCCACTTCTGTTTCAGCAGCTTTGTTTGAGCTGGGACACTTaGCTTCTTCAGTTCCTGGCGACAATTCAGTATCCGGGAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HHPLLFQQLCLSWDT*LLQFLATIQYPGVG Trigger: ACCTACTCCCGGATACTGAATTGTCGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGAAGTGGATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTTTGCAGGCTCTTGGTaGTTTCCTTGTTTAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELMQRSWRDVTGLLSLACFAGSW*FPCLAE Trigger: TTCTGCTAAACAAGGAAACAACCAAGAGCCTGCAAA...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GAGCTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTTTGAGTGGTGGTCATaGTATTGTCGTTTTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELMQRSWRDVTGLLSLACFEWWS*YCRFSS Trigger: GGAGCTAAAACGACAATACAATGACCACCACTCAAA...GCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGTGTCTGCTGTTTCGTTaGAGGGCACACAGTTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: HFHIAVHHQRKSGLELKQCLLFR*RAHSYL Trigger: CAGGTAACTGTGTGCCCTCAAACGAAACAGCAGACA...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 90 bp | CCTGAGCCAACAGTACCAACCCAAACCTGTGAGTTACTGATGACATaGTTAGCCTCCAGTTGGATGCTAAATGTGACACCAAGCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PEPTVPTQTCELLMT*LASSWMLNVTPSSD Trigger: ATCTGAGCTTGGTGTCACATTTAGCATCCAACTGGAGGCTAACCATGTCATCAGTAACTCACAGGTTTGGGTTGGTACTGTTGGCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 90 bp | ACTCAGAGTCATCATCCACTTCTGTTTCAGCAGCTTTGTTTGAGCTaGGACACTTGGCTTCTTCAGTTCCTGGCGACAATTCAGTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: TQSHHPLLFQQLCLS*DTWLLQFLATIQYP Trigger: CGGATACTGAATTGTCGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGAAGTGGATGATGACTCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCAAAGGCCATCCACATTTaGAAAAGAGTCTTTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMQRSWRDVTGLLSLACSKAIHI*KRVFPV Trigger: GACAGGAAAGACTCTTTTCAAAATGTGGATGGCCTT...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGATGGTTAGCCTCCAGTaGGATGCTAAATGTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQMVSLQ*DAKCDT Trigger: GGTGTCACATTTAGCATCCAACTGGAGGCTAACCAT...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGGCTCCCCAATCATTTTaGTGCCGAATACATCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQAPQSF*CRIHLP Trigger: AGGCAGATGTATTCGGCACAAAAATGATTGGGGAGC...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGTTTCAGCAGCTTTGTTaGAGCTGGGACACTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQFQQLC*SWDTWL Trigger: AAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAA...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | AACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGAGTATTTGCAGGCTCTaGGTTGTTTCCTTGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NYLPEQCGEEEAARRFYQSICRL*VVSLFS Trigger: GCTAAACAAGGAAACAACCAAGAGCCTGCAAATACT...CTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCACACTGTTCTGGTAAGTAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGCACTTCTCCTTTCTGTaGAAATTCCCCACCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFHIAVHHQRKSGLELKQHFSFL*KFPTTS Trigger: TGAAGTGGTGGGGAATTTCAACAGAAAGGAGAAGTG...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 90 bp | CCAACCCAAACCTGTGAGTTACTGATGACATGGTTAGCCTCCAGTTaGATGCTAAATGTGACACCAAGCTCAGATGAAAAGGATTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTQTCELLMTWLASS*MLNVTPSSDEKDFR Trigger: CCTGAAATCCTTTTCATCTGAGCTTGGTGTCACATTTAGCATCCAACTGGAGGCTAACCATGTCATCAGTAACTCACAGGTTTGGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | TTGCTGGAATTTGAACTCCAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACATAGATGCCTGTTTCTaGGCAGATAACTTTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLEFELQTFGRAVSALNHIDACF*ADNFAA Trigger: GGCTGCAAAGTTATCTGCCAAGAAACAGGCATCTAT...GTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTGGAGTTCAAATTCCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CTGATGCAGAGGTCATGGAGGGATGTTACTGGCTTGCTTTCCCTAGCTTGCTCAAATGTTTCTTATTTTTaGGTACAGCCAAGACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LMQRSWRDVTGLLSLACSNVSYF*VQPRLQ Trigger: CTGGAGTCTTGGCTGTACCAAAAAATAAGAAACATT...TGAGCAAGCTAGGGAAAGCAAGCCAGTAACATCCCTCCATGACCTCTGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGGCGTCATAGTACACTaGCAGCAATTCATCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: HFHIAVHHQRKSGLELKQGVIVH*QQFIKI Trigger: GATTTTGATGAATTGCTGCAAGTGTACTATGACGCC...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCAAGGCTCGGTATGCTaGAATTTCATACCACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LMREERETTYQNSVVRKKQGSVC*NFIPLT Trigger: CGTCAGTGGTATGAAATTCAAGCATACCGAGCCTTG...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | TACTATGTAGACCAGGATGGCCTGAAACACATAGAGAGCTGCCTCTGCCCTAAGTCCAGAGTAGGCTCATaGTCTTTTGTACATTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: YYVDQDGLKHIESCLCPKSRVGS*SFVHFS Trigger: CGAAAAATGTACAAAAGACAATGAGCCTACTCTGGA...CTTAGGGCAGAGGCAGCTCTCTATGTGTTTCAGGCCATCCTGGTCTACATAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | GTGGTGAGGAAGAAGCAGCCAGGCGGTTTTACCAGGAAAGTTTTACAGAAACAGTTTGCTTTCCAAAAGTaGGGCTTGAAGATCGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VVRKKQPGGFTRKVLQKQFAFQK*GLKIGK Trigger: TTTCCCGATCTTCAAGCCCAACTTTTGGAAAGCAAA...CTGTTTCTGTAAAACTTTCCTGGTAAAACCGCCTGGCTGCTTCTTCCTCACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGCGGTTCTTTGATGACTaGAGTACTGGTGTGCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HFHIAVHHQRKSGLELKQRFFDD*STGVQF Trigger: AAATTGCACACCAGTACTCAAGTCATCAAAGAACCG...CTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 90 bp | TTTAGGTCTCTTGCATTGTCCCCCGTGATCTTTCTTAACAGTATTTaGAGGCTCTTGGTTGTTTCCTTGTTTAGCAGAACAGCAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: FRSLALSPVIFLNSI*RLLVVSLFSRTAAP Trigger: AGGTGCTGCTGTTCTGCTAAACAAGGAAACAACCAAGAGCCTGCAAATACTGTTAAGAAAGATCACGGGGGACAATGCAAGAGACCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 90 bp | GAAGCTAGTCGTGCATCTACATGGTGGACGTCCTTTTCCAAACAATaGCGTTTTCTTATCTGCTGTGTAGTTTCTAAGGGTCGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EASRASTWWTSFSKQ*RFLICCVVSKGRIL Trigger: AAGAATCCGACCCTTAGAAACTACACAGCAGATAAGAAAACGTCATTGTTTGGAAAAGGACGTCCACCATGTAGATGCACGACTAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 90 bp | GGCTTTTTATTCAGGCCCTCATCCACTGGCTTCTCACTAAGAGATTaGTGCCATGCTAATGCAGAACAAAGTAAGGCTAAACTTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GFLFRPSSTGFSLRD*CHANAEQSKAKLFP Trigger: TGGAAAAAGTTTAGCCTTACTTTGTTCTGCATTAGCATGGCAGCAATCTCTTAGTGAGAAGCCAGTGGATGAGGGCCTGAATAAAAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | AGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGAAGACCTCTCGATTTaGAGTGGTGGTCATTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RGGKGLFSLHFHIAVHHQEDLSI*SGGHCI Trigger: AATACAATGACCACCACTCAAAATCGAGAGGTCTTC...TTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 90 bp | GAGATAGTCAAGCACCATAAAGAGTCCTTTGAGCACGACTTGAGTTaGTGCACTGATAATAGGGATTTGTATTGCCTCCTCTTTACCATG | + |
|
Preference number: 5 (lower is better) Translates to: EIVKHHKESFEHDLS*CTDNRDLYCLLFTM Trigger: CATGGTAAAGAGGAGGCAATACAAATCCCTATTATCAGTGCATCAACTCAAGTCGTGCTCAAAGGACTCTTTATGGTGCTTGACTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 90 bp | TTTTTATTCAGGCCCTCATCCACTGGCTTCTCACTAAGAGATTGCTaGCATGCTAATGCAGAACAAAGTAAGGCTAAACTTTTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: FLFRPSSTGFSLRDC*HANAEQSKAKLFPL Trigger: AAGTGGAAAAAGTTTAGCCTTACTTTGTTCTGCATTAGCATGGCAGCAATCTCTTAGTGAGAAGCCAGTGGATGAGGGCCTGAATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS-3UTR CAA 90 bp | CTCATGAGAGAAGAAAGGGAAACTACTTACCAGAACAGTGTGGTGAGGAAGAAGCCAGGAGTAAGTCTGTaGAATAGCAACTTTATAATC | + |
|
Preference number: 5 (lower is better) Translates to: LMREERETTYQNSVVRKKPGVSL*NSNFII Trigger: GATTATAAAGTTGCTATTCAACAGACTTACTCCTGG...CTTCTTCCTCACCACACTGTTCTGGTAAGTAGTTTCCCTTTCTTCTCTCATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS TCA 90 bp | ATCTGCTGTGTAGTTTCTAAGGGTCGGATTCTTTTCTTCTCTACCTaGAAATCATCATCTTCGTCTCTGTGTATAGATGCCTGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ICCVVSKGRILFFST*KSSSSSLCIDACFL Trigger: CAAGAAACAGGCATCTATACACAGAGACGAAGATGATGATTTTCAGGTAGAGAAGAAAAGAATCCGACCCTTAGAAACTACACAGCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 90 bp | TTCCCGTGCTTGCCATCCAGCAGCTCCATGCACTTCTCCTTTCTGTaGAAATTCCCCACCACTTCAGGATGGACACAGCTGTGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FPCLPSSSSMHFSFL*KFPTTSGWTQLWSL Trigger: CAGGGACCACAGCTGTGTCCATCCTGAAGTGGTGGGGAATTTCAACAGAAAGGAGAAGTGCATGGAGCTGCTGGATGGCAAGCACGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS TCA 72 bp | GTGGTCCCTGCTGGAAAGAATAGTCATCGGGACCCCTaGGTAAGCTGTCTTACGGAGCTCCCTGGTAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVPAGKNSHRDP*VSCLTELPGNL Trigger: CAGATTACCAGGGAGCTCCGTAAGACAGCTTACTCAGGGGTCCCGATGACTATTCTTTCCAGCAGGGACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
||
| CDS TCA 72 bp | GAACTCGGTCAGCGACTCCAGGGCACTTGCAAAGCTTaGGTGGTGCTGAATCTGCTGCCTCACCCATTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ELGQRLQGTCKA*VVLNLLPHPFR Trigger: TCTAAATGGGTGAGGCAGCAGATTCAGCACCACTCAAGCTTTGCAAGTGCCCTGGAGTCGCTGACCGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 90 bp | ACAGCACGGGCGTTATCATCTGAGAAATCCAGACCCTCGCTCACCTaGCCACGACAGACTGCTATGAGAAGGGCTCCATCCTTTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TARALSSEKSRPSLT*PRQTAMRRAPSFSP Trigger: AGGAGAAAAGGATGGAGCCCTTCTCATAGCAGTCTGTCGTGGCAAGGTGAGCGAGGGTCTGGATTTCTCAGATGATAACGCCCGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | AATCCCTACGGTTATGACAGCACGGGCGTTATCATCTaGGAAATCCAGACCCTCGCTCACCTTGCCACGACA | + |
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Preference number: 6 (lower is better) Translates to: NPYGYDSTGVII*EIQTLAHLATT Trigger: TGTCGTGGCAAGGTGAGCGAGGGTCTGGATTTCTCAGATGATAACGCCCGTGCTGTCATAACCGTAGGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 72 bp | TTGAAATTCCCCACCACTTCAGGATGGACACAGCTGTaGTCCCTGCTGGAAAGAATAGTCATCGGGACCCCT | + |
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Preference number: 6 (lower is better) Translates to: LKFPTTSGWTQL*SLLERIVIGTP Trigger: AGGGGTCCCGATGACTATTCTTTCCAGCAGGGACCACAGCTGTGTCCATCCTGAAGTGGTGGGGAATTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 72 bp | GAAATCCAGACCCTCGCTCACCTTGCCACGACAGACTaGTATGAGAAGGGCTCCATCCTTTTCTCCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: EIQTLAHLATTD*YEKGSILFSFE Trigger: TTCAAAGGAGAAAAGGATGGAGCCCTTCTCATAGCAGTCTGTCGTGGCAAGGTGAGCGAGGGTCTGGATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | TATAGTAGGGACAAGCTTTCAGTTTCCTCCCGAGGCTaGCTAGTTCTTCTATGTCCCAGGCTCTGGACATGC | + |
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Preference number: 6 (lower is better) Translates to: YSRDKLSVSSRG*LVLLCPRLWTC Trigger: GCATGTCCAGAGCCTGGGACATAGAAGAACTAGTCAGCCTCGGGAGGAAACTGAAAGCTTGTCCCTACTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | CAGAGTCATCATCCACTTCTGTTTCAGCAGCTTTGTTaGAGCTGGGACACTTGGCTTCTTCAGTTCCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: QSHHPLLFQQLC*SWDTWLLQFLA Trigger: CGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGAAGTGGATGATGACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 90 bp | TCATCATCCACTTCTGTTTCAGCAGCTTTGTTTGAGCTGGGACACTaGGCTTCTTCAGTTCCTGGCGACAATTCAGTATCCGGGAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSTSVSAALFELGH*ASSVPGDNSVSGSR Trigger: CCTACTCCCGGATACTGAATTGTCGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGAAGTGGATGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | AGAGTCATCATCCACTTCTGTTTCAGCAGCTTTGTTTaGGCTGGGACACTTGGCTTCTTCAGTTCCTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RVIIHFCFSSFV*AGTLGFFSSWR Trigger: TCGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGAAGTGGATGATGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | CATACCACTGACGGCCAGGCAGAAGACCTCTCGATTTaGAGTGGTGGTCATTGTATTGTCGTTTTAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HTTDGQAEDLSI*SGGHCIVVLAP Trigger: TGGAGCTAAAACGACAATACAATGACCACCACTCAAAATCGAGAGGTCTTCTGCCTGGCCGTCAGTGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | GATCCTTCACATTTGGGAAAGGAATCCCTACGGTTATaGCAGCACGGGCGTTATCATCTGAGAAATCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: DPSHLGKESLRL*QHGRYHLRNPD Trigger: GTCTGGATTTCTCAGATGATAACGCCCGTGCTGTCATAACCGTAGGGATTCCTTTCCCAAATGTGAAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 72 bp | GATGGCAAAAAGCACAGAATTCCTTGGCTCACAGTCTaGCACACAGATAACAGAAGCATTCCCACTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: DGKKHRIPWLTV*HTDNRSIPTSS Trigger: GGATGAAGTGGGAATGCTTCTGTTATCTGTGTGCCAGACTGTGAGCCAAGGAATTCTGTGCTTTTTGCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 72 bp | CATCATCCACTTCTGTTTCAGCAGCTTTGTTTGAGCTaGGACACTTGGCTTCTTCAGTTCCTGGCGACAATT | + |
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Preference number: 6 (lower is better) Translates to: HHPLLFQQLCLS*DTWLLQFLATI Trigger: AATTGTCGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGAAGTGGATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | CGTAGGGGCTCGTGGCTTTTCTTCCTTATGTTACCGTaGATCAAACTATCTAGCTCATCCCGAGCAAACCTA | + |
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Preference number: 6 (lower is better) Translates to: RRGSWLFFLMLP*IKLSSSSRANL Trigger: TAGGTTTGCTCGGGATGAGCTAGATAGTTTGATCAACGGTAACATAAGGAAGAAAAGCCACGAGCCCCTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | ACTTCTGTTTCAGCAGCTTTGTTTGAGCTGGGACACTaGGCTTCTTCAGTTCCTGGCGACAATTCAGTATCC | + |
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Preference number: 6 (lower is better) Translates to: TSVSAALFELGH*ASSVPGDNSVS Trigger: GGATACTGAATTGTCGCCAGGAACTGAAGAAGCCAAGTGTCCCAGCTCAAACAAAGCTGCTGAAACAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 90 bp | CCCGTGATCTTTCTTAACAGTATTTGCAGGCTCTTGGTTGTTTCCTaGTTTAGCAGAACAGCAGCACCTGGAACAAAGGCCATCCACATT | + |
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Preference number: 6 (lower is better) Translates to: PVIFLNSICRLLVVS*FSRTAAPGTKAIHI Trigger: AATGTGGATGGCCTTTGTTCCAGGTGCTGCTGTTCTGCTAAACAAGGAAACAACCAAGAGCCTGCAAATACTGTTAAGAAAGATCACGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 90 bp | CTTGAATTTCATACCACTGACGGCCAGGCAGAAGACCTCTCGATTTaGAGTGGTGGTCATTGTATTGTCGTTTTAGCTCCACCTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LEFHTTDGQAEDLSI*SGGHCIVVLAPPED Trigger: ATCTTCAGGTGGAGCTAAAACGACAATACAATGACCACCACTCAAAATCGAGAGGTCTTCTGCCTGGCCGTCAGTGGTATGAAATTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | GAACAGCAGCACCTGGAACAAAGGCCATCCACATTTTaGAAAGAGTCTTTCCTGTCGGAGAAAGACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EQQHLEQRPSTF*KESFLSEKDFP Trigger: AGGAAAGTCTTTCTCCGACAGGAAAGACTCTTTTCAAAATGTGGATGGCCTTTGTTCCAGGTGCTGCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | AAACCTAAGCTGAACTTCGGTTACACTGTAGCTTGCTaGTTCCCGAGCACAGTCTTCAATGTTGTGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KPKLNFGYTVAC*FPSTVFNVVSF Trigger: GAAGCTCACAACATTGAAGACTGTGCTCGGGAATCAGCAAGCTACAGTGTAACCGAAGTTCAGCTTAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | GCTTCAATCTTCACTGGTGAAATTATGACTTCTGACTaGAGGCAAGGTCCCAGTGATGTGTCTGCTGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: ASIFTGEIMTSD*RQGPSDVSAVS Trigger: CGAAACAGCAGACACATCACTGGGACCTTGCCTTCAGTCAGAAGTCATAATTTCACCAGTGAAGATTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 72 bp | AGGCCCTCATCCACTGGCTTCTCACTAAGAGATTGCTaGCATGCTAATGCAGAACAAAGTAAGGCTAAACTT | + |
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Preference number: 6 (lower is better) Translates to: RPSSTGFSLRDC*HANAEQSKAKL Trigger: AAGTTTAGCCTTACTTTGTTCTGCATTAGCATGGCAGCAATCTCTTAGTGAGAAGCCAGTGGATGAGGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 72 bp | TTCAGGCCCTCATCCACTGGCTTCTCACTAAGAGATTaGTGCCATGCTAATGCAGAACAAAGTAAGGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: FRPSSTGFSLRD*CHANAEQSKAK Trigger: TTTAGCCTTACTTTGTTCTGCATTAGCATGGCAGCAATCTCTTAGTGAGAAGCCAGTGGATGAGGGCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CCA 72 bp | ACAGTACCAACCCAAACCTGTGAGTTACTGATGACATaGTTAGCCTCCAGTTGGATGCTAAATGTGACACCA | + |
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Preference number: 6 (lower is better) Translates to: TVPTQTCELLMT*LASSWMLNVTP Trigger: TGGTGTCACATTTAGCATCCAACTGGAGGCTAACCATGTCATCAGTAACTCACAGGTTTGGGTTGGTACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | AGAACAGCAGCACCTGGAACAAAGGCCATCCACATTTaGAAAAGAGTCTTTCCTGTCGGAGAAAGACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RTAAPGTKAIHI*KRVFPVGERLS Trigger: GGAAAGTCTTTCTCCGACAGGAAAGACTCTTTTCAAAATGTGGATGGCCTTTGTTCCAGGTGCTGCTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 72 bp | CTTGCATTGTCCCCCGTGATCTTTCTTAACAGTATTTaGAGGCTCTTGGTTGTTTCCTTGTTTAGCAGAACA | + |
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Preference number: 6 (lower is better) Translates to: LALSPVIFLNSI*RLLVVSLFSRT Trigger: TGTTCTGCTAAACAAGGAAACAACCAAGAGCCTGCAAATACTGTTAAGAAAGATCACGGGGGACAATGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS GCA 72 bp | AGAGAATTAAAGATAGGCCAGTTGACTGGCTCTGTTTaGTTTCCAAAAGTTGGGCTTGAAGATCGGGAAATC | + |
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Preference number: 6 (lower is better) Translates to: RELKIGQLTGSV*FPKVGLEDREI Trigger: GATTTCCCGATCTTCAAGCCCAACTTTTGGAAAGCAAACAGAGCCAGTCAACTGGCCTATCTTTAATTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | TCCAGAAGATGGTTTGCTTGGACTATTGAAATGAGGTaGAGTGTCCAGGTTTGTGTCGCTGTAGGTAAAATT | + |
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Preference number: 6 (lower is better) Translates to: SRRWFAWTIEMR*SVQVCVAVGKI Trigger: AATTTTACCTACAGCGACACAAACCTGGACACTTCACCTCATTTCAATAGTCCAAGCAAACCATCTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | TCTTTACCATGGATTGGTGTGACTTTCTCTTCTTTTTaGAGAACAGCTGAGAGATGCCTCTGCAAAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SLPWIGVTFSSF*RTAERCLCKTG Trigger: TCCAGTTTTGCAGAGGCATCTCTCAGCTGTTCTTCAAAAAGAAGAGAAAGTCACACCAATCCATGGTAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | TTGAAATGCCGTCTTAGAGAATTAAAGATAGGCCAGTaGACTGGCTCTGTTTGCTTTCCAAAAGTTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LKCRLRELKIGQ*TGSVCFPKVGL Trigger: AAGCCCAACTTTTGGAAAGCAAACAGAGCCAGTCAACTGGCCTATCTTTAATTCTCTAAGACGGCATTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 90 bp | TTCAGGGGTGAGAGTGTTCCTGATGTTAGAACAATGGTCCGTACTTaGTCATTAATATCTGAAAAGGCCACAGCTGGATTTAAACACCAA | + |
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Preference number: 6 (lower is better) Translates to: FRGESVPDVRTMVRT*SLISEKATAGFKHQ Trigger: TTGGTGTTTAAATCCAGCTGTGGCCTTTTCAGATATTAATGACAAAGTACGGACCATTGTTCTAACATCAGGAACACTCTCACCCCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 90 bp | ACTTTACTATTGAAATGCCGTCTTAGAGAATTAAAGATAGGCCAGTaGACTGGCTCTGTTTGCTTTCCAAAAGTTGGGCTTGAAGATCGG | + |
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Preference number: 6 (lower is better) Translates to: TLLLKCRLRELKIGQ*TGSVCFPKVGLEDR Trigger: CCGATCTTCAAGCCCAACTTTTGGAAAGCAAACAGAGCCAGTCAACTGGCCTATCTTTAATTCTCTAAGACGGCATTTCAATAGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | GGATTTGTATTGCCTCCTCTTTACCATGGATTGGTGTaGCTTTCTCTTCTTTTTGAAGAACAGCTGAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: GFVLPPLYHGLV*LSLLFEEQLRD Trigger: ATCTCTCAGCTGTTCTTCAAAAAGAAGAGAAAGTCACACCAATCCATGGTAAAGAGGAGGCAATACAAATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS TCA 72 bp | CTGTCTTCACTGACTCCAAACTATGCCATAGGCCAGTaGAAATCCAACGTTCTCTTAATTTCTCTAATAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSSLTPNYAIGQ*KSNVLLISLIA Trigger: AGCTATTAGAGAAATTAAGAGAACGTTGGATTTTCACTGGCCTATGGCATAGTTTGGAGTCAGTGAAGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | GAGAGTGTTCCTGATGTTAGAACAATGGTCCGTACTTaGTCATTAATATCTGAAAAGGCCACAGCTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: ESVPDVRTMVRT*SLISEKATAGF Trigger: AAATCCAGCTGTGGCCTTTTCAGATATTAATGACAAAGTACGGACCATTGTTCTAACATCAGGAACACTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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| CDS CAA 72 bp | GATCTATCAGTTTCAACCAGTTCACCGTTTTCTTCGTaGGTATCGACAGGATCAAAAAGTTCAGGTGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: DLSVSTSSPFSS*VSTGSKSSGVK Trigger: TTTTACACCTGAACTTTTTGATCCTGTCGATACCAACGAAGAAAACGGTGAACTGGTTGAAACTGATAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044423.4 |
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