Pregenerated sensors for BRINP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035131Ensembl transcript IDs: ENSMUST00000074622.11, ENSMUST00000128345.3, ENSMUST00000132847.8, ENSMUST00000166814.8
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGTaGACAGGTAAGGCAGGCAGAGGCATCGCCCACAGTACAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: HVACVAGATPGTVVR*TGKAGRGIAHSTGQ Trigger: CTGCCCTGTACTGTGGGCGATGCCTCTGCCTGCCTTACCTGTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CCA 90 bp | AGAAAGGCTGTGCACACTACCTGGTCGTTGGGGCATGTGCAGGAGTaGGTTTCCTCGGAGAAGCTTCCCAGAAGGCCATTCTCATTGCAG | + |
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Preference number: 1 (lower is better) Translates to: RKAVHTTWSLGHVQE*VSSEKLPRRPFSLQ Trigger: CTGCAATGAGAATGGCCTTCTGGGAAGCTTCTCCGAGGAAACCCACTCCTGCACATGCCCCAACGACCAGGTAGTGTGCACAGCCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR TCA 90 bp | CTCATTGCAGTAGAGAAAAGACTGGATGCGAGTGAGCCAGTAGGTTaGTGTTCTCTGTCTCGGCAGGCTGATGAGAGGCTGCTTGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: LIAVEKRLDASEPVG*CSLSRQADERLLVA Trigger: TGCCACAAGCAGCCTCTCATCAGCCTGCCGAGACAGAGAACATCAACCTACTGGCTCACTCGCATCCAGTCTTTTCTCTACTGCAATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR GCA 90 bp | GCAGATAAACTCGCCCTCAGAATTGCAAGCAATGTAGCTCAGTGCTaGCTGTACAAAACGTTCCTGAAGGTAGTCGGGAAGGAGAACTTG | + |
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Preference number: 1 (lower is better) Translates to: ADKLALRIASNVAQC*LYKTFLKVVGKENL Trigger: CAAGTTCTCCTTCCCGACTACCTTCAGGAACGTTTTGTACAGGCAGCACTGAGCTACATTGCTTGCAATTCTGAGGGCGAGTTTATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR GCA 90 bp | CTTGCAGATAAACTCGCCCTCAGAATTGCAAGCAATGTAGCTCAGTaGTGCCTGTACAAAACGTTCCTGAAGGTAGTCGGGAAGGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LADKLALRIASNVAQ*CLYKTFLKVVGKEN Trigger: GTTCTCCTTCCCGACTACCTTCAGGAACGTTTTGTACAGGCAGCACTGAGCTACATTGCTTGCAATTCTGAGGGCGAGTTTATCTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CCA 90 bp | TTAAGCAAATCTGTAAAGAGAGACCCAAGATCATGTGGACCAGACTaGACTTGTATTTGTTACTCTTCAAGGTCAGGAGCATCCGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LSKSVKRDPRSCGPD*TCICYSSRSGASAF Trigger: GAAAGCGGATGCTCCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCTGGTCCACATGATCTTGGGTCTCTCTTTACAGATTTGCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CCA 90 bp | TTTCTGTTATTCGAAGAAGATTCTCTTCCATGGCTTGAATATCCATaGAAGGGCAATTACATTCTGGGAATTTTGGACCACAGTGGCACC | + |
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Preference number: 1 (lower is better) Translates to: FLLFEEDSLPWLEYP*KGNYILGILDHSGT Trigger: GGTGCCACTGTGGTCCAAAATTCCCAGAATGTAATTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAATCTTCTTCGAATAACAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CCA 90 bp | CTGTTTTTAGTTAAGCAAATCTGTAAAGAGAGACCCAAGATCATGTaGACCAGACTGGACTTGTATTTGTTACTCTTCAAGGTCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LFLVKQICKERPKIM*TRLDLYLLLFKVRS Trigger: GCTCCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCTGGTCCACATGATCTTGGGTCTCTCTTTACAGATTTGCTTAACTAAAAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR TCA 90 bp | GCTTTCCATGTTTCTGTTATTCGAAGAAGATTCTCTTCCATGGCTTaGATATCCATGGAAGGGCAATTACATTCTGGGAATTTTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: AFHVSVIRRRFSSMA*ISMEGQLHSGNFGP Trigger: TGGTCCAAAATTCCCAGAATGTAATTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAATCTTCTTCGAATAACAGAAACATGGAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR GCA 90 bp | TTGCTGATAAAGATGGCATGTACTTCTATTCGTCTATCTGTTTTCTaGAACAGGTATTTCATCTCTAGGTCTTGTAGGTCGGTCTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LLIKMACTSIRLSVF*NRYFISRSCRSVSK Trigger: CTTTGAGACCGACCTACAAGACCTAGAGATGAAATACCTGTTGCAGAAAACAGATAGACGAATAGAAGTACATGCCATCTTTATCAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGGTGCCACACCGGGTACGGTTGTCAGGTGCACAGGTAAGGCAGGCAGAGGGATATGGTGAAGTCTaGGAAGGGTGCTGTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LQVPHRVRLSGAQVRQAEGYGEV*EGCCPC Trigger: ACAGGGACAGCACCCTTCGCAGACTTCACCATATCC...CTCTGCCTGCCTTACCTGTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTCAGCATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGGCAATTTGGATATGGTaGAGTCTGCGAAGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LAQHVACVAGATPGTVVRAIWIW*SLRRVL Trigger: CAGCACCCTTCGCAGACTTCACCATATCCAAATTGC...CCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTCAGCATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGCACAAAAATTGTGAGTaGCTCCTCTCCTCCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LAQHVACVAGATPGTVVRHKNCE*LLSSQS Trigger: ACTCTGGGAGGAGAGGAGTCACTCACAATTTTTGTG...CCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTCAGCATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGGTGTTTCTGTCACCTTaGTGGCAGTGGATGCAATTT | + |
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Preference number: 2 (lower is better) Translates to: LAQHVACVAGATPGTVVRVFLSP*WQWMQF Trigger: AAATTGCATCCACTGCCATCAAGGTGACAGAAACAC...CCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGGTGCCACACCGGGTACGGTTGTCAGGTGCACAGGTAAGGCAGGCAGAGCCAAAAGTCTTATGTTaGGGAAGAACTCAGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LQVPHRVRLSGAQVRQAEPKVLC*GRTQGQ Trigger: TTGCCCCTGAGTTCTTCCGCAACATAAGACTTTTGG...CTCTGCCTGCCTTACCTGTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGGTGCCACACCGGGTACGGTTGTCAGGTGCACAGGTAAGGCAGGCAGAGAATGTAGCTCAGTGCTaGCTGTACAAAACGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LQVPHRVRLSGAQVRQAENVAQC*LYKTFL Trigger: CAGGAACGTTTTGTACAGGCAGCACTGAGCTACATT...CTCTGCCTGCCTTACCTGTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTCAGCATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGACGAACTATTGGTGCTaGTTTCACTTCCTTCAGATC | + |
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Preference number: 2 (lower is better) Translates to: LAQHVACVAGATPGTVVRTNYWC*FHFLQI Trigger: GATCTGAAGGAAGTGAAACCAGCACCAATAGTTCGT...CCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGGTGCCACACCGGGTACGGTTGTCAGGTGCACAGGTAAGGCAGGCAGAGAGGGCAATTACATTCTaGGAATTTTGGACCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: LQVPHRVRLSGAQVRQAERAITF*EFWTTV Trigger: CACTGTGGTCCAAAATTCCCAGAATGTAATTGCCCT...CTCTGCCTGCCTTACCTGTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CAA 90 bp | GTTCTCTGTCTCGGCAGGCTGATGAGAGGCTGCTTGTGGCACCGTTaGCTAAGGCTAAAGAGCTTGTGTACAATTCTGTGTGCCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLCLGRLMRGCLWHR*LRLKSLCTILCAFR Trigger: CCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAGCAAACGGTGCCACAAGCAGCCTCTCATCAGCCTGCCGAGACAGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CAA 90 bp | TCTCTAGGTCTTGTAGGTCGGTCTCAAAGCCAATGTAGTGATCGGTaGACTCAGCGACTTCAGGCTTGCAGAGTCCCTGGCTCAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: SLGLVGRSQSQCSDR*TQRLQACRVPGSAC Trigger: ACATGCTGAGCCAGGGACTCTGCAAGCCTGAAGTCGCTGAGTCAACCGATCACTACATTGGCTTTGAGACCGACCTACAAGACCTAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CAA 90 bp | TCTGTGATTTGCTGTAGAGTAGGTCGTCGTCCCAAAAGTCTTATGTaGCGGAAGAACTCAGGGGCAAGAGGCAGAGGAGAACCAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVICCRVGRRPKSLM*RKNSGARGRGEPRK Trigger: TTTCCTTGGTTCTCCTCTGCCTCTTGCCCCTGAGTTCTTCCGCAACATAAGACTTTTGGGACGACGACCTACTCTACAGCAAATCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CAA 90 bp | AGGACCTGTCCGTGTTTCTGTCACCTTGATGGCAGTGGATGCAATTaGGATATGGTGAAGTCTGCGAAGGGTGCTGTCCCTGTCAATAAA | + |
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Preference number: 2 (lower is better) Translates to: RTCPCFCHLDGSGCN*DMVKSAKGAVPVNK Trigger: TTTATTGACAGGGACAGCACCCTTCGCAGACTTCACCATATCCAAATTGCATCCACTGCCATCAAGGTGACAGAAACACGGACAGGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CAA 90 bp | CTGATGAGAGGCTGCTTGTGGCACCGTTTGCTAAGGCTAAAGAGCTaGTGTACAATTCTGTGTGCCTTCAGGAAAAGCTGTTTCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LMRGCLWHRLLRLKS*CTILCAFRKSCFML Trigger: CAGCATGAAACAGCTTTTCCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAGCAAACGGTGCCACAAGCAGCCTCTCATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR GCA 90 bp | GTCAATAAACTCCAAAGGCTCATAATAAATGCTCTCATTGCTGTTGGGGCCATTCAGCGACTTCAGGCTTaGAGAGTCCCTGGCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VNKLQRLIINALIAVGAIQRLQA*RVPGSA Trigger: TGCTGAGCCAGGGACTCTGCAAGCCTGAAGTCGCTG...AATGGCCCCAACAGCAATGAGAGCATTTATTATGAGCCTTTGGAGTTTATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGTGCTTGACATTTATGGTTAACTACATAATTTGGTTGTGTCATAATCCAAGATCCAGGCGGCGCTaGCCGGGTGGGGAGAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GLCLTFMVNYIIWLCHNPRSRRR*PGGESL Trigger: TAAACTCTCCCCACCCGGTCAGCGCCGCCTGGATCT...TGGATTATGACACAACCAAATTATGTAGTTAACCATAAATGTCAAGCACAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CAA 90 bp | CAAATCTGTAAAGAGAGACCCAAGATCATGTGGACCAGACTGGACTaGTATTTGTTACTCTTCAAGGTCAGGAGCATCCGCTTTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QICKERPKIMWTRLD*YLLLFKVRSIRFLQ Trigger: CTGGAGAAAGCGGATGCTCCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCTGGTCCACATGATCTTGGGTCTCTCTTTACAGATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGTGCTTGACATTTATGGTTAACTACATAATTTGGTTGTGTCATAATCCAGCGGCGCTGACCGGGTaGGGAGAGTTTATTTACACG | + |
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Preference number: 2 (lower is better) Translates to: GLCLTFMVNYIIWLCHNPAALTG*GEFIYT Trigger: CGTGTAAATAAACTCTCCCCACCCGGTCAGCGCCGC...TGGATTATGACACAACCAAATTATGTAGTTAACCATAAATGTCAAGCACAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CAA 90 bp | GGCTTTCCATGTTTCTGTTATTCGAAGAAGATTCTCTTCCATGGCTaGAATATCCATGGAAGGGCAATTACATTCTGGGAATTTTGGACC | + |
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Preference number: 2 (lower is better) Translates to: GFPCFCYSKKILFHG*NIHGRAITFWEFWT Trigger: GGTCCAAAATTCCCAGAATGTAATTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAATCTTCTTCGAATAACAGAAACATGGAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR GCA 90 bp | GGGTTGTGCTTGACATTTATGGTTAACTACATAATTTGGTTGTGTCATAATCCATTCCTTCAGATCTTTTaGTCAGCTTCCGCTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GLCLTFMVNYIIWLCHNPFLQIF*SASACP Trigger: TGGACAAGCGGAAGCTGAGCAAAAGATCTGAAGGAA...TGGATTATGACACAACCAAATTATGTAGTTAACCATAAATGTCAAGCACAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGCTAAAGAGCTTGTGTACAATTCTGTGTGCCTTCAGGAAAAGCTGTTTCACTCCTTCAAGATTTTaGGTTGTGCTTGACATTTAT | + |
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Preference number: 2 (lower is better) Translates to: LRLKSLCTILCAFRKSCFTPSRF*VVLDIY Trigger: ATAAATGTCAAGCACAACCCAAAATCTTGAAGGAGT...GAAACAGCTTTTCCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCTATTCGTCTATCTGTTTTCTGCAACAGGTATTTCATCTCTAGGTCTTGTAAGATTTTCTGTGATTTaGTGTAGAGTAGGTCGTCGT | + |
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Preference number: 2 (lower is better) Translates to: LLFVYLFSATGISSLGLVRFSVI*CRVGRR Trigger: ACGACGACCTACTCTACAGCAAATCACAGAAAATCT...TACAAGACCTAGAGATGAAATACCTGTTGCAGAAAACAGATAGACGAATAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAACTCCTTCAAGATTTTaGGTTGTGCTTGACATTTAT | + |
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Preference number: 2 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTTPSRF*VVLDIY Trigger: ATAAATGTCAAGCACAACCCAAAATCTTGAAGGAGT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACTTCATGTGTGTAAATTaGCATCCAACGTTATTGACT | + |
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Preference number: 2 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHFMCVN*HPTLLT Trigger: AGTCAATAACGTTGGATGGCAATTTACACACATGAA...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATATTCATGTGTGTAAATTaGCATCCAACGTTATTGACT | + |
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Preference number: 2 (lower is better) Translates to: FMFPLEDVMHKSIATEHIFMCVN*HPTLLT Trigger: AGTCAATAACGTTGGATGGCAATTTACACACATGAA...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACATTTCTTCTCTCAACTaGAAGGTTATTTACCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHISSLN*KVIYLP Trigger: TGGAAGGTAAATAACCTTGCAGTTGAGAGAAGAAAT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACACTCCTTCAAGATTTTaGGTTGTGCTTGACATTTAT | + |
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Preference number: 2 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHTPSRF*VVLDIY Trigger: ATAAATGTCAAGCACAACCCAAAATCTTGAAGGAGT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGTGCTTGACATTTATGGTTAACTACATAATTTGGTTGTGTCATAATCCATCATGTGGACCAGACTaGACTTGTATTTGTTACTCT | + |
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Preference number: 2 (lower is better) Translates to: GLCLTFMVNYIIWLCHNPSCGPD*TCICYS Trigger: AGAGTAACAAATACAAGTCCAGTCTGGTCCACATGA...TGGATTATGACACAACCAAATTATGTAGTTAACCATAAATGTCAAGCACAACCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGTGCTTGACATTTATGGTTAACTACATAATTTGGTTGTGTCATAATCCAGCTGATAGCAAGAAATaGGTCCCATATTTCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: GLCLTFMVNYIIWLCHNPADSKK*VPYFLI Trigger: TATCAAGAAATATGGGACTCATTTCTTGCTATCAGC...TGGATTATGACACAACCAAATTATGTAGTTAACCATAAATGTCAAGCACAACCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR GCA 72 bp | TGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGTaGACAGGTAAGGCAGGCAGAGGCATCGCCCACAGT | + |
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Preference number: 3 (lower is better) Translates to: CVAGATPGTVVR*TGKAGRGIAHS Trigger: ACTGTGGGCGATGCCTCTGCCTGCCTTACCTGTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR GCA 72 bp | GCTTGCAGAGTCCCTGGCTCAGCATGTAGCCTGTGTTaGAGGTGCCACACCGGGTACGGTTGTCAGGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: ACRVPGSACSLC*RCHTGYGCQVH Trigger: GTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAGGGACTCTGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CCA 72 bp | CCCACAGTACAGGGCAGAAAGGCTGTGCACACTACCTaGTCGTTGGGGCATGTGCAGGAGTGGGTTTCCTCG | + |
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Preference number: 3 (lower is better) Translates to: PTVQGRKAVHTT*SLGHVQEWVSS Trigger: CGAGGAAACCCACTCCTGCACATGCCCCAACGACCAGGTAGTGTGCACAGCCTTTCTGCCCTGTACTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR CCA 72 bp | TACAGGGCAGAAAGGCTGTGCACACTACCTGGTCGTTaGGGCATGTGCAGGAGTGGGTTTCCTCGGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: YRAERLCTLPGR*GMCRSGFPRRS Trigger: GCTTCTCCGAGGAAACCCACTCCTGCACATGCCCCAACGACCAGGTAGTGTGCACAGCCTTTCTGCCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTCAGCATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGTACATTCTGGGAATTTaGGACCACAGTGGCACCAGC | + |
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Preference number: 3 (lower is better) Translates to: LAQHVACVAGATPGTVVRYILGI*DHSGTS Trigger: GCTGGTGCCACTGTGGTCCAAAATTCCCAGAATGTA...CCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTCAGCATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGCCAAACTCCAGAGCATaGCTTTCTTCAGTCAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: LAQHVACVAGATPGTVVRPNSRA*LSSVSQ Trigger: TTGACTGACTGAAGAAAGCAATGCTCTGGAGTTTGG...CCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGCGACTTCAGGCTTGCAGAGTCCCTGGCTCAGCATGTAGCCTGTGTTGCCTTCCTTCAGATCTTTaGCTCAGCTTCCGCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: TQRLQACRVPGSACSLCCLPSDL*LSFRLS Trigger: GGACAAGCGGAAGCTGAGCAAAAGATCTGAAGGAAG...GCAACACAGGCTACATGCTGAGCCAGGGACTCTGCAAGCCTGAAGTCGCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| 3UTR GCA 72 bp | CAATGTAGTGATCGGTTGACTCAGCGACTTCAGGCTTaGAGAGTCCCTGGCTCAGCATGTAGCCTGTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QCSDRLTQRLQA*RVPGSACSLCC Trigger: GCAACACAGGCTACATGCTGAGCCAGGGACTCTGCAAGCCTGAAGTCGCTGAGTCAACCGATCACTACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR GCA 72 bp | GTTGATGTTCTCTGTCTCGGCAGGCTGATGAGAGGCTaGTTGTGGCACCGTTTGCTAAGGCTAAAGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VDVLCLGRLMRG*LWHRLLRLKSL Trigger: CAAGCTCTTTAGCCTTAGCAAACGGTGCCACAAGCAGCCTCTCATCAGCCTGCCGAGACAGAGAACATCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CCA 72 bp | GTTCTCTGTCTCGGCAGGCTGATGAGAGGCTGCTTGTaGCACCGTTTGCTAAGGCTAAAGAGCTTGTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: VLCLGRLMRGCL*HRLLRLKSLCT Trigger: TGTACACAAGCTCTTTAGCCTTAGCAAACGGTGCCACAAGCAGCCTCTCATCAGCCTGCCGAGACAGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGGCATCGCCCACAGTACAGGGCAGAAAGGCTGTGCACACTACCTGGTCGGAGAACTTGAAGCCCTaGCAACTGAATTTTATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AEASPTVQGRKAVHTTWSENLKP*QLNFIL Trigger: GAGAATAAAATTCAGTTGCAAGGGCTTCAAGTTCTC...CGACCAGGTAGTGTGCACAGCCTTTCTGCCCTGTACTGTGGGCGATGCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR GCA 72 bp | CTCGCCCTCAGAATTGCAAGCAATGTAGCTCAGTGCTaGCTGTACAAAACGTTCCTGAAGGTAGTCGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LALRIASNVAQC*LYKTFLKVVGK Trigger: CTTCCCGACTACCTTCAGGAACGTTTTGTACAGGCAGCACTGAGCTACATTGCTTGCAATTCTGAGGGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR TCA 72 bp | ATTCTCACCACCTCACTAGTAGACAGCTTGAGTCTATaGCGAAGCAAGCAAGAAAACAGATCCAGGCGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: ILTTSLVDSLSL*RSKQENRSRRR Trigger: GCGCCGCCTGGATCTGTTTTCTTGCTTGCTTCGTCATAGACTCAAGCTGTCTACTAGTGAGGTGGTGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR GCA 72 bp | AAACTCGCCCTCAGAATTGCAAGCAATGTAGCTCAGTaGTGCCTGTACAAAACGTTCCTGAAGGTAGTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: KLALRIASNVAQ*CLYKTFLKVVG Trigger: CCCGACTACCTTCAGGAACGTTTTGTACAGGCAGCACTGAGCTACATTGCTTGCAATTCTGAGGGCGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGCTAAAGAGCTTGTGTACAATTCTGTGTGCCTTCAGGAAAAGCTGTTTCGTCGGGAAGGAGAACTaGAAGCCCTTGCAACTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRLKSLCTILCAFRKSCFVGKEN*KPLQLN Trigger: ATTCAGTTGCAAGGGCTTCAAGTTCTCCTTCCCGAC...GAAACAGCTTTTCCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR TCA 72 bp | AATAAATGCTCTCATTGCTGTTGGGGCCATTTGCCTTaGTGCGACTCCTCAGGTAGATGTGTACTGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NKCSHCCWGHLP*CDSSGRCVLSQ Trigger: TTGAGACAGTACACATCTACCTGAGGAGTCGCATCAAGGCAAATGGCCCCAACAGCAATGAGAGCATTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR GCA 72 bp | CTCATAATAAATGCTCTCATTGCTGTTGGGGCCATTTaGCTTGATGCGACTCCTCAGGTAGATGTGTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LIINALIAVGAI*LDATPQVDVYC Trigger: ACAGTACACATCTACCTGAGGAGTCGCATCAAGGCAAATGGCCCCAACAGCAATGAGAGCATTTATTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CCA 72 bp | TCTGTAAAGAGAGACCCAAGATCATGTGGACCAGACTaGACTTGTATTTGTTACTCTTCAAGGTCAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVKRDPRSCGPD*TCICYSSRSGA Trigger: TGCTCCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCTGGTCCACATGATCTTGGGTCTCTCTTTACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACCCCAAAAGTCTTATGTaGCGGAAGAACTCAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHPKSLM*RKNSGA Trigger: TGCCCCTGAGTTCTTCCGCAACATAAGACTTTTGGG...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGCTAAAGAGCTTGTGTACAATTCTGTGTGCCTTCAGGAAAAGCTGTTTCTTGCTCAGCTTCCGCTaGTCCACAAAAATTGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LRLKSLCTILCAFRKSCFLLSFR*STKIVS Trigger: ACTCACAATTTTTGTGGACAAGCGGAAGCTGAGCAA...GAAACAGCTTTTCCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGCTAAAGAGCTTGTGTACAATTCTGTGTGCCTTCAGGAAAAGCTGTTTCATTCTCTTCCATGGCTaGAATATCCATGGAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRLKSLCTILCAFRKSCFILFHG*NIHGRA Trigger: TGCCCTTCCATGGATATTCAAGCCATGGAAGAGAAT...GAAACAGCTTTTCCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CCA 72 bp | TTCGAAGAAGATTCTCTTCCATGGCTTGAATATCCATaGAAGGGCAATTACATTCTGGGAATTTTGGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: FEEDSLPWLEYP*KGNYILGILDH Trigger: GTGGTCCAAAATTCCCAGAATGTAATTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAATCTTCTTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR GCA 72 bp | AAGATGGCATGTACTTCTATTCGTCTATCTGTTTTCTaGAACAGGTATTTCATCTCTAGGTCTTGTAGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: KMACTSIRLSVF*NRYFISRSCRS Trigger: CGACCTACAAGACCTAGAGATGAAATACCTGTTGCAGAAAACAGATAGACGAATAGAAGTACATGCCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CCA 72 bp | GTTAAGCAAATCTGTAAAGAGAGACCCAAGATCATGTaGACCAGACTGGACTTGTATTTGTTACTCTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VKQICKERPKIM*TRLDLYLLLFK Trigger: CTTGAAGAGTAACAAATACAAGTCCAGTCTGGTCCACATGATCTTGGGTCTCTCTTTACAGATTTGCTTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR-3UTR CAA 90 bp | GATTCTCTTCCATGGCTTGAATATCCATGGAAGGGCAATTACATTCTGGGAATTTGCCATCCAACGTTATaGACTGATATAAGACAGATA | + |
|
Preference number: 3 (lower is better) Translates to: DSLPWLEYPWKGNYILGICHPTL*TDIRQI Trigger: TATCTGTCTTATATCAGTCAATAACGTTGGATGGCA...AATTCCCAGAATGTAATTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAGTTCATGTGTGTAAATaGCCATCCAACGTTATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKVHVCK*PSNVID Trigger: GTCAATAACGTTGGATGGCAATTTACACACATGAAC...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGTTCATGTGTGTAAATaGCCATCCAACGTTATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FMFPLEDVMHKSIATEHIVHVCK*PSNVID Trigger: GTCAATAACGTTGGATGGCAATTTACACACATGAAC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACTGCCATCCAACGTTATaGACTGATATAAGACAGATA | + |
|
Preference number: 3 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHCHPTL*TDIRQI Trigger: TATCTGTCTTATATCAGTCAATAACGTTGGATGGCA...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGTGCTTGACATTTATGGTTAACTACATAATTTGGTTGTGTCATAATCCAGTTCATGTGTGTAAATaGCCATCCAACGTTATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GLCLTFMVNYIIWLCHNPVHVCK*PSNVID Trigger: GTCAATAACGTTGGATGGCAATTTACACACATGAAC...TGGATTATGACACAACCAAATTATGTAGTTAACCATAAATGTCAAGCACAACCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCAGCATGTAGCCTGTGTTGCAGGTGCCACACCGGGTACGGTTGTCAGGAAGGGGCTTGTGGCATaGTGGTCAGAGACAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAQHVACVAGATPGTVVRKGLVA*WSETAA Trigger: TGCTGCTGTCTCTGACCAGCATGCCACAAGCCCCTT...CCTGACAACCGTACCCGGTGTGGCACCTGCAACACAGGCTACATGCTGAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CAA 72 bp | GTACAGGGCAGAAAGGCTGTGCACACTACCTGGTCGTaGGGGCATGTGCAGGAGTGGGTTTCCTCGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQGRKAVHTTWS*GHVQEWVSSEK Trigger: CTTCTCCGAGGAAACCCACTCCTGCACATGCCCCAACGACCAGGTAGTGTGCACAGCCTTTCTGCCCTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGCATCGCCCACAGTACAGGGCAGAAAGGCTGTGCACACTACCTGGTCGGCTAAAACCCAGCAATaGAGACTCAGTACTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AEASPTVQGRKAVHTTWSAKTQQ*RLSTIH Trigger: GTGGATAGTACTGAGTCTTCATTGCTGGGTTTTAGC...CGACCAGGTAGTGTGCACAGCCTTTCTGCCCTGTACTGTGGGCGATGCCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CAA 72 bp | CTTGTAGGTCGGTCTCAAAGCCAATGTAGTGATCGGTaGACTCAGCGACTTCAGGCTTGCAGAGTCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVGRSQSQCSDR*TQRLQACRVPG Trigger: GCCAGGGACTCTGCAAGCCTGAAGTCGCTGAGTCAACCGATCACTACATTGGCTTTGAGACCGACCTACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CAA 72 bp | GATGTTCTCTGTCTCGGCAGGCTGATGAGAGGCTGCTaGTGGCACCGTTTGCTAAGGCTAAAGAGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVLCLGRLMRGC*WHRLLRLKSLC Trigger: ACACAAGCTCTTTAGCCTTAGCAAACGGTGCCACAAGCAGCCTCTCATCAGCCTGCCGAGACAGAGAACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CAA 72 bp | TGCTGTAGAGTAGGTCGTCGTCCCAAAAGTCTTATGTaGCGGAAGAACTCAGGGGCAAGAGGCAGAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCRVGRRPKSLM*RKNSGARGRGE Trigger: TTCTCCTCTGCCTCTTGCCCCTGAGTTCTTCCGCAACATAAGACTTTTGGGACGACGACCTACTCTACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CAA 72 bp | CTCGGCAGGCTGATGAGAGGCTGCTTGTGGCACCGTTaGCTAAGGCTAAAGAGCTTGTGTACAATTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRLMRGCLWHR*LRLKSLCTILC Trigger: ACACAGAATTGTACACAAGCTCTTTAGCCTTAGCAAACGGTGCCACAAGCAGCCTCTCATCAGCCTGCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR TCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAAGATCCAGGCGGCGCTaGCCGGGTGGGGAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKRSRRR*PGGESL Trigger: TAAACTCTCCCCACCCGGTCAGCGCCGCCTGGATCT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAAGATCCAGGCGGCGCTaGCCGGGTGGGGAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITRSRRR*PGGESL Trigger: TAAACTCTCCCCACCCGGTCAGCGCCGCCTGGATCT...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| 3UTR CAA 72 bp | GGCTGCTTGTGGCACCGTTTGCTAAGGCTAAAGAGCTaGTGTACAATTCTGTGTGCCTTCAGGAAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCLWHRLLRLKS*CTILCAFRKSC Trigger: ACAGCTTTTCCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAGCAAACGGTGCCACAAGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAGGTCGTTGGGGCATGTaGAGGAGTGGGTTTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITGRWGM*RSGFPR Trigger: CCGAGGAAACCCACTCCTGCACATGCCCCAACGACC...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGGTCGTTGGGGCATGTaGAGGAGTGGGTTTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIGRWGM*RSGFPR Trigger: CCGAGGAAACCCACTCCTGCACATGCCCCAACGACC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAGGGCTTGTGGCATGCTaGTCAGAGACAGCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTGLVAC*SETAAT Trigger: GGTTGCTGCTGTCTCTGACCAGCATGCCACAAGCCC...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | GATTCTCTTCCATGGCTTGAATATCCATGGAAGGGCAATTACATTCTGGGAATTGGGCTTGTGGCATGCTaGTCAGAGACAGCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: DSLPWLEYPWKGNYILGIGLVAC*SETAAT Trigger: GGTTGCTGCTGTCTCTGACCAGCATGCCACAAGCCC...AATTCCCAGAATGTAATTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATACAGCGACTTCAGGCTTaGAGAGTCCCTGGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIQRLQA*RVPGSA Trigger: TGCTGAGCCAGGGACTCTGCAAGCCTGAAGTCGCTG...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAGCTGTTGGGGCCATTTaGCTTGATGCGACTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTAVGAI*LDATPQ Trigger: CTGAGGAGTCGCATCAAGGCAAATGGCCCCAACAGC...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAGGGCTTGTGGCATGCTaGTCAGAGACAGCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITGLVAC*SETAAT Trigger: GGTTGCTGCTGTCTCTGACCAGCATGCCACAAGCCC...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAGGGCATGTGCAGGAGTaGGTTTCCTCGGAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTGHVQE*VSSEKL Trigger: AAGCTTCTCCGAGGAAACCCACTCCTGCACATGCCC...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAGCGGCGCTGACCGGGTaGGGAGAGTTTATTTACACG | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITAALTG*GEFIYT Trigger: CGTGTAAATAAACTCTCCCCACCCGGTCAGCGCCGC...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGCGGCGCTGACCGGGTaGGGAGAGTTTATTTACACG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHAALTG*GEFIYT Trigger: CGTGTAAATAAACTCTCCCCACCCGGTCAGCGCCGC...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| 3UTR CAA 72 bp | AGACCCAAGATCATGTGGACCAGACTGGACTTGTATTaGTTACTCTTCAAGGTCAGGAGCATCCGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPKIMWTRLDLY*LLFKVRSIRFL Trigger: GAGAAAGCGGATGCTCCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCTGGTCCACATGATCTTGGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| 3UTR CAA 72 bp | AAAGAGAGACCCAAGATCATGTGGACCAGACTGGACTaGTATTTGTTACTCTTCAAGGTCAGGAGCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KERPKIMWTRLD*YLLLFKVRSIR Trigger: GCGGATGCTCCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCTGGTCCACATGATCTTGGGTCTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAATCTGTGTACTCCTGTaGGCGATGGAAGGGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTICVLL*AMEGSL Trigger: AAGGGACCCTTCCATCGCTCACAGGAGTACACAGAT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAAAGGGGCTTGTGGCATaGTGGTCAGAGACAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKKGLVA*WSETAA Trigger: TGCTGCTGTCTCTGACCAGCATGCCACAAGCCCCTT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAAAGGGGCTTGTGGCATaGTGGTCAGAGACAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITKGLVA*WSETAA Trigger: TGCTGCTGTCTCTGACCAGCATGCCACAAGCCCCTT...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAGGGCATGTGCAGGAGTaGGTTTCCTCGGAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKGHVQE*VSSEKL Trigger: AAGCTTCTCCGAGGAAACCCACTCCTGCACATGCCC...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAAGTCCGCTCCCAGTCTaGAAAGCTGCTCTCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITSPLPV*KAALTH Trigger: GTGAGTGAGAGCAGCTTTCCAGACTGGGAGCGGACT...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACATCTGTGTACTCCTGTaGGCGATGGAAGGGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHICVLL*AMEGSL Trigger: AAGGGACCCTTCCATCGCTCACAGGAGTACACAGAT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAAAGACTGGATGCGAGTaGGCCAGTAGGTTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTKTGCE*ASRLMF Trigger: GAACATCAACCTACTGGCTCACTCGCATCCAGTCTT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAGGATATGGTGAAGTCTaGGAAGGGTGCTGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKGYGEV*EGCCPC Trigger: ACAGGGACAGCACCCTTCGCAGACTTCACCATATCC...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGCCCAGGTTCCGGGATaGGTCAATAAACTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIAQVPG*VNKLQR Trigger: CCTTTGGAGTTTATTGACCCATCCCGGAACCTGGGC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAGCCCAGGTTCCGGGATaGGTCAATAAACTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITAQVPG*VNKLQR Trigger: CCTTTGGAGTTTATTGACCCATCCCGGAACCTGGGC...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGCAATTTGGATATGGTaGAGTCTGCGAAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIAIWIW*SLRRVL Trigger: CAGCACCCTTCGCAGACTTCACCATATCCAAATTGC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAGCAATTTGGATATGGTaGAGTCTGCGAAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKAIWIW*SLRRVL Trigger: CAGCACCCTTCGCAGACTTCACCATATCCAAATTGC...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACAAGACTGGATGCGAGTaGGCCAGTAGGTTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHKTGCE*ASRLMF Trigger: GAACATCAACCTACTGGCTCACTCGCATCCAGTCTT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACTGCCTCCAAAGGGATTaGCATAAACAGCCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHCLQRD*HKQPAL Trigger: CAGTGCTGGCTGTTTATGTCAATCCCTTTGGAGGCA...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAATGCCTCCAAAGGGATTaGCATAAACAGCCAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKCLQRD*HKQPAL Trigger: CAGTGCTGGCTGTTTATGTCAATCCCTTTGGAGGCA...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAACTCGCCCTCAGAATTaGAAGCAATGTAGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTTRPQN*KQCSSV Trigger: CACTGAGCTACATTGCTTGCAATTCTGAGGGCGAGT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACATACTCCTGTGAGCGATaGAAGGGTCCCTTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITYSCER*KGPLSE Trigger: CTCTGATAAGGGACCCTTCCATCGCTCACAGGAGTA...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACACACAAAAATTGTGAGTaGCTCCTCTCCTCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITHKNCE*LLSSQS Trigger: ACTCTGGGAGGAGAGGAGTCACTCACAATTTTTGTG...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATTCTCTTCCATGGCTTaGATATCCATGGAAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTFSSMA*ISMEGQ Trigger: TTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAA...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACAATGTAGTGATCGGTTaGCTCAGCGACTTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHNVVIG*LSDFRL Trigger: AAGCCTGAAGTCGCTGAGTCAACCGATCACTACATT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAGACAGCTTGAGTCTATaGCGAAGCAAGCAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTDSLSL*RSKQEN Trigger: GTTTTCTTGCTTGCTTCGTCATAGACTCAAGCTGTC...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAAATGTAGCTCAGTGCTaGCTGTACAAAACGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTNVAQC*LYKTFL Trigger: CAGGAACGTTTTGTACAGGCAGCACTGAGCTACATT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACCTTATCTCTAGTAGCTaGAAAAGTGCCGAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHLISSS*KSAESW Trigger: CCAGGACTCGGCACTTTTGCAGCTACTAGAGATAAG...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACACTTATCTCTAGTAGCTaGAAAAGTGCCGAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITLISSS*KSAESW Trigger: CCAGGACTCGGCACTTTTGCAGCTACTAGAGATAAG...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAAAATCAGGTCCCGAATaGCTTCAGGGTCAAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKKSGPE*LQGQSA Trigger: TGCACTTTGACCCTGAAGCCATTCGGGACCTGATTT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGCTAAAACCCAGCAATaGAGACTCAGTACTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIAKTQQ*RLSTIH Trigger: GTGGATAGTACTGAGTCTTCATTGCTGGGTTTTAGC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
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| CDS-3UTR TCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAGCTAAAACCCAGCAATaGAGACTCAGTACTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITAKTQQ*RLSTIH Trigger: GTGGATAGTACTGAGTCTTCATTGCTGGGTTTTAGC...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAGTGTTTCTGTCACCTTaGTGGCAGTGGATGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKVFLSP*WQWMQF Trigger: AAATTGCATCCACTGCCATCAAGGTGACAGAAACAC...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACATTATTCTCAGGACTCTaGACCAGAACAGAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITLFSGL*TRTELT Trigger: TGTCAGCTCTGTTCTGGTTCAGAGTCCTGAGAATAA...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAATTCTCTTCCATGGCTTaGATATCCATGGAAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKFSSMA*ISMEGQ Trigger: TTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAA...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGACAGCTTGAGTCTATaGCGAAGCAAGCAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIDSLSL*RSKQEN Trigger: GTTTTCTTGCTTGCTTCGTCATAGACTCAAGCTGTC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATACCAAAAGTCTTATGTTaGGGAAGAACTCAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIPKVLC*GRTQGQ Trigger: TTGCCCCTGAGTTCTTCCGCAACATAAGACTTTTGG...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATATTCCTTCAGATCTTTTaGTCAGCTTCCGCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIFLQIF*SASACP Trigger: TGGACAAGCGGAAGCTGAGCAAAAGATCTGAAGGAA...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACTTCCTTCAGATCTTTTaGTCAGCTTCCGCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHFLQIF*SASACP Trigger: TGGACAAGCGGAAGCTGAGCAAAAGATCTGAAGGAA...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATACAGACGAACTATTGGTaGTGGTTTCACTTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIQTNYW*WFHFLQ Trigger: CTGAAGGAAGTGAAACCAGCACCAATAGTTCGTCTG...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACCAGACGAACTATTGGTaGTGGTTTCACTTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHQTNYW*WFHFLQ Trigger: CTGAAGGAAGTGAAACCAGCACCAATAGTTCGTCTG...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACAATGTAGCTCAGTGCTaGCTGTACAAAACGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHNVAQC*LYKTFL Trigger: CAGGAACGTTTTGTACAGGCAGCACTGAGCTACATT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAGCAATGTAGCTCAGTaGTGCCTGTACAAAACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHISNVAQ*CLYKTF Trigger: GAACGTTTTGTACAGGCAGCACTGAGCTACATTGCT...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAAGCAATGTAGCTCAGTaGTGCCTGTACAAAACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKSNVAQ*CLYKTF Trigger: GAACGTTTTGTACAGGCAGCACTGAGCTACATTGCT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAAATAAATGCTCTCATTaGTGTTGGGGCCATTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTNKCSH*CWGHLP Trigger: AGGCAAATGGCCCCAACAGCAATGAGAGCATTTATT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTGTGCTTGACATTTATGGTTAACTACATAATTTGGTTGTGTCATAATCCATACTCCTGTGAGCGATaGAAGGGTCCCTTATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLCLTFMVNYIIWLCHNPYSCER*KGPLSE Trigger: CTCTGATAAGGGACCCTTCCATCGCTCACAGGAGTA...TGGATTATGACACAACCAAATTATGTAGTTAACCATAAATGTCAAGCACAACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR CCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATAAACAGCCAGCACTaGCTCCAACGTGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKINSQH*LQRAVF Trigger: AAAAACAGCACGTTGGAGCCAGTGCTGGCTGTTTAT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAATAAACAGCCAGCACTaGCTCCAACGTGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITINSQH*LQRAVF Trigger: AAAAACAGCACGTTGGAGCCAGTGCTGGCTGTTTAT...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACACACTTGGATGTTGTTaGTTTTCATGTAGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHTLGCC*FSCSPG Trigger: ACCTGGGCTACATGAAAATCAACAACATCCAAGTGT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAACACTTGGATGTTGTTaGTTTTCATGTAGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKTLGCC*FSCSPG Trigger: ACCTGGGCTACATGAAAATCAACAACATCCAAGTGT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAAGATTTTCTGTGATTTaGTGTAGAGTAGGTCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTRFSVI*CRVGRR Trigger: ACGACGACCTACTCTACAGCAAATCACAGAAAATCT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACCTTGATGGCAGTGGATaGAATTTGGATATGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHLDGSG*NLDMVK Trigger: CTTCACCATATCCAAATTGCATCCACTGCCATCAAG...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACACTTGATGGCAGTGGATaGAATTTGGATATGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITLDGSG*NLDMVK Trigger: CTTCACCATATCCAAATTGCATCCACTGCCATCAAG...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAAATAAATGCTCTCATTaGTGTTGGGGCCATTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKNKCSH*CWGHLP Trigger: AGGCAAATGGCCCCAACAGCAATGAGAGCATTTATT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAACGAACTATTGGTGCTaGTTTCACTTCCTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITTNYWC*FHFLQI Trigger: GATCTGAAGGAAGTGAAACCAGCACCAATAGTTCGT...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAAGGGCAATTACATTCTaGGAATTTTGGACCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITRAITF*EFWTTV Trigger: CACTGTGGTCCAAAATTCCCAGAATGTAATTGCCCT...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACAGGGCAATTACATTCTaGGAATTTTGGACCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHRAITF*EFWTTV Trigger: CACTGTGGTCCAAAATTCCCAGAATGTAATTGCCCT...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAAGATTTTCTGTGATTTaGTGTAGAGTAGGTCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKRFSVI*CRVGRR Trigger: ACGACGACCTACTCTACAGCAAATCACAGAAAATCT...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAACAACTTGGCATTAAATaGCTGAAGAGCAGACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKQLGIK*LKSRLN Trigger: ATTCAGTCTGCTCTTCAGGCATTTAATGCCAAGTTG...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATACAACTTGGCATTAAATaGCTGAAGAGCAGACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIQLGIK*LKSRLN Trigger: ATTCAGTCTGCTCTTCAGGCATTTAATGCCAAGTTG...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAATCATGTGGACCAGACTaGACTTGTATTTGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKSCGPD*TCICYS Trigger: AGAGTAACAAATACAAGTCCAGTCTGGTCCACATGA...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACTCATGTGGACCAGACTaGACTTGTATTTGTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHSCGPD*TCICYS Trigger: AGAGTAACAAATACAAGTCCAGTCTGGTCCACATGA...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| 3UTR CAA 72 bp | TGTTTCTGTTATTCGAAGAAGATTCTCTTCCATGGCTaGAATATCCATGGAAGGGCAATTACATTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFCYSKKILFHG*NIHGRAITFWE Trigger: TTCCCAGAATGTAATTGCCCTTCCATGGATATTCAAGCCATGGAAGAGAATCTTCTTCGAATAACAGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS-3UTR TCA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAGCTGATAGCAAGAAATaGGTCCCATATTTCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PSRGCNAQKHCHGTYKITADSKK*VPYFLI Trigger: TATCAAGAAATATGGGACTCATTTCTTGCTATCAGC...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAATTTCTTCTCTCAACTaGAAGGTTATTTACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTISSLN*KVIYLP Trigger: TGGAAGGTAAATAACCTTGCAGTTGAGAGAAGAAAT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATCCATTGTCCACAAATaGATTATAGTTGAAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTSIVHK*IIVEVL Trigger: CAACACTTCAACTATAATGCATTTGTGGACAATGGA...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAATAATCCACTGTGTTTaGCAACTTGGCATTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FMFPLEDVMHKSIATEHIIIHCV*QLGIKC Trigger: GCATTTAATGCCAAGTTGCCAAACACAGTGGATTAT...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACTCCATTGTCCACAAATaGATTATAGTTGAAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHSIVHK*IIVEVL Trigger: CAACACTTCAACTATAATGCATTTGTGGACAATGGA...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGTGCCACACCGGGTACGGTTGTCAGGTGCACAGGTAAGGCAGGCAGAGGCCAGTCGAAGGGGCTaGTGGCATGCTGGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQVPHRVRLSGAQVRQAEASRRG*WHAGQR Trigger: TCTCTGACCAGCATGCCACAAGCCCCTTCGACTGGC...CTCTGCCTGCCTTACCTGTGCACCTGACAACCGTACCCGGTGTGGCACCTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
||
| CDS CCA 90 bp | GATGGAAGGGTCCCTTATCAGAGAGGAGCCAGTCGAAGGGGCTTGTaGCATGCTGGTCAGAGACAGCAGCAACCGCTAAAACCCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DGRVPYQRGASRRGL*HAGQRQQQPLKPSN Trigger: ATTGCTGGGTTTTAGCGGTTGCTGCTGTCTCTGACCAGCATGCCACAAGCCCCTTCGACTGGCTCCTCTCTGATAAGGGACCCTTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000132847.8 ENSMUST00000166814.8 |
||
| CDS CCA 90 bp | CCCTGTCGGCTTCTGTCCACAAAATCTGTGTACTCCTGTGAGCGATaGAAGGGTCCCTTATCAGAGAGGAGCCAGTCGAAGGGGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCRLLSTKSVYSCER*KGPLSERSQSKGLV Trigger: CACAAGCCCCTTCGACTGGCTCCTCTCTGATAAGGGACCCTTCCATCGCTCACAGGAGTACACAGATTTTGTGGACAGAAGCCGACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000132847.8 ENSMUST00000166814.8 |
||
| CDS TCA 90 bp | GCTAAATCCCTGTCGGCTTCTGTCCACAAAATCTGTGTACTCCTGTaGGCGATGGAAGGGTCCCTTATCAGAGAGGAGCCAGTCGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AKSLSASVHKICVLL*AMEGSLIREEPVEG Trigger: CCCTTCGACTGGCTCCTCTCTGATAAGGGACCCTTCCATCGCTCACAGGAGTACACAGATTTTGTGGACAGAAGCCGACAGGGATTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000132847.8 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGCCAGTCGAAGGGGCTaGTGGCATGCTGGTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHIASRRG*WHAGQR Trigger: TCTCTGACCAGCATGCCACAAGCCCCTTCGACTGGC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAGTCGGGAAGGAGAACTaGAAGCCCTTGCAACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTVGKEN*KPLQLN Trigger: ATTCAGTTGCAAGGGCTTCAAGTTCTCCTTCCCGAC...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATACATTCTGGGAATTTaGGACCACAGTGGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTYILGI*DHSGTS Trigger: GCTGGTGCCACTGTGGTCCAAAATTCCCAGAATGTA...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATACATGCTGTTCTCCAGTaGTTCGTAGCGGCGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHIHAVLQ*FVAALK Trigger: TTTCAGCGCCGCTACGAACAACTGGAGAACAGCATG...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACCATGCTGTTCTCCAGTaGTTCGTAGCGGCGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHHAVLQ*FVAALK Trigger: TTTCAGCGCCGCTACGAACAACTGGAGAACAGCATG...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAATGCTCTCATTGCTGTaGGGGCCATTTGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTMLSLL*GPFALM Trigger: CATCAAGGCAAATGGCCCCAACAGCAATGAGAGCAT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACACCCAAAAGTCTTATGTaGCGGAAGAACTCAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSRGCNAQKHCHGTYKITPKSLM*RKNSGA Trigger: TGCCCCTGAGTTCTTCCGCAACATAAGACTTTTGGG...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAACCCAAAAGTCTTATGTaGCGGAAGAACTCAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKPKSLM*RKNSGA Trigger: TGCCCCTGAGTTCTTCCGCAACATAAGACTTTTGGG...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAACTTCCTTCAGATCTTTaGCTCAGCTTCCGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKLPSDL*LSFRLS Trigger: GGACAAGCGGAAGCTGAGCAAAAGATCTGAAGGAAG...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAGTCGGGAAGGAGAACTaGAAGCCCTTGCAACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKVGKEN*KPLQLN Trigger: ATTCAGTTGCAAGGGCTTCAAGTTCTCCTTCCCGAC...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATATACATTCTGGGAATTTaGGACCACAGTGGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHIYILGI*DHSGTS Trigger: GCTGGTGCCACTGTGGTCCAAAATTCCCAGAATGTA...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACACAATGTAGTGATCGGTaGACTCAGCGACTTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSRGCNAQKHCHGTYKITQCSDR*TQRLQA Trigger: AGCCTGAAGTCGCTGAGTCAACCGATCACTACATTG...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATACAATGTAGTGATCGGTaGACTCAGCGACTTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHIQCSDR*TQRLQA Trigger: AGCCTGAAGTCGCTGAGTCAACCGATCACTACATTG...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAATGCTCTCATTGCTGTaGGGGCCATTTGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHIMLSLL*GPFALM Trigger: CATCAAGGCAAATGGCCCCAACAGCAATGAGAGCAT...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTATCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACCGTGTTTCTGTCACCTaGATGGCAGTGGATGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LVSFYVPSRGCNAQKHCHRVSVT*MAVDAI Trigger: AATTGCATCCACTGCCATCAAGGTGACAGAAACACG...GTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGATACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAATTCTCTTCCATGGCTaGAATATCCATGGAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTILFHG*NIHGRA Trigger: TGCCCTTCCATGGATATTCAAGCCATGGAAGAGAAT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAATTGCTCAGCTTCCGCTaGTCCACAAAAATTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKLLSFR*STKIVS Trigger: ACTCACAATTTTTGTGGACAAGCGGAAGCTGAGCAA...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAATTCTCTTCCATGGCTaGAATATCCATGGAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHIILFHG*NIHGRA Trigger: TGCCCTTCCATGGATATTCAAGCCATGGAAGAGAAT...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATACTAAGGCTAAAGAGCTaGTGTACAATTCTGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHILRLKS*CTILCA Trigger: GGCACACAGAATTGTACACAAGCTCTTTAGCCTTAG...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACAAGACTGGACTTGTATTaGTTACTCTTCAAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFYVPSRGCNAQKHCHGTRLDLY*LLFKVR Trigger: CCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCT...TGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
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| CDS-3UTR CAA 90 bp | CTAAGGCTAAAGAGCTTGTGTACAATTCTGTGTGCCTTCAGGAAAAGCTGTTTCACAAGCCTGTATATCTaGTATCTTGTGCTAAATCCC | + |
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Preference number: 5 (lower is better) Translates to: LRLKSLCTILCAFRKSCFTSLYI*YLVLNP Trigger: GGGATTTAGCACAAGATACAAGATATACAGGCTTGT...GAAACAGCTTTTCCTGAAGGCACACAGAATTGTACACAAGCTCTTTAGCCTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128345.3 |
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| CDS-3UTR CAA 90 bp | CCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAATTACAAGACTGGACTTGTATTaGTTACTCTTCAAGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSRGCNAQKHCHGTYKITRLDLY*LLFKVR Trigger: CCTGACCTTGAAGAGTAACAAATACAAGTCCAGTCT...TGTAATTTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
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| CDS-3UTR CAA 90 bp | TATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAAAGAGAACTTGAAGCCCTaGCAACTGAATTTTATTCTC | + |
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Preference number: 5 (lower is better) Translates to: YVPSRGCNAQKHCHGTYKENLKP*QLNFIL Trigger: GAGAATAAAATTCAGTTGCAAGGGCTTCAAGTTCTC...TTTATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
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| CDS-3UTR CAA 90 bp | TTTATGTTCCCTCTAGAGGATGTAATGCACAAAAGCATTGCCACGGAACATATAGCTGTAGCCAAACACTaGGATGTTGTTGATTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: FMFPLEDVMHKSIATEHIAVAKH*DVVDFH Trigger: ATGAAAATCAACAACATCCAAGTGTTTGGCTACAGC...TATATGTTCCGTGGCAATGCTTTTGTGCATTACATCCTCTAGAGGGAACATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074622.11 ENSMUST00000166814.8 |
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| CDS GCA 72 bp | TTATCAGAGAGGAGCCAGTCGAAGGGGCTTGTGGCATaGTGGTCAGAGACAGCAGCAACCGCTAAAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: LSERSQSKGLVA*WSETAATAKTQ Trigger: CTGGGTTTTAGCGGTTGCTGCTGTCTCTGACCAGCATGCCACAAGCCCCTTCGACTGGCTCCTCTCTGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000132847.8 ENSMUST00000166814.8 |
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| CDS TCA 72 bp | CTGTCGGCTTCTGTCCACAAAATCTGTGTACTCCTGTaGGCGATGGAAGGGTCCCTTATCAGAGAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSASVHKICVLL*AMEGSLIREEP Trigger: TGGCTCCTCTCTGATAAGGGACCCTTCCATCGCTCACAGGAGTACACAGATTTTGTGGACAGAAGCCGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000132847.8 ENSMUST00000166814.8 |
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| CDS CCA 72 bp | CTTCTGTCCACAAAATCTGTGTACTCCTGTGAGCGATaGAAGGGTCCCTTATCAGAGAGGAGCCAGTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLSTKSVYSCER*KGPLSERSQSK Trigger: CTTCGACTGGCTCCTCTCTGATAAGGGACCCTTCCATCGCTCACAGGAGTACACAGATTTTGTGGACAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074622.11 ENSMUST00000128345.3 ENSMUST00000132847.8 ENSMUST00000166814.8 |
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