Pregenerated sensors for BRINP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028351Ensembl transcript IDs: ENSMUST00000030036.6
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCCATCACACAGCACCTaGGGCCAAAGAAGCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: CLILAPAQQRSLQFIAYAPSHST*GQRSHQ Trigger: TTGGTGGCTTCTTTGGCCTCAGGTGCTGTGTGATGG...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| 3UTR-3UTR GCA 90 bp | CGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATATTTAATCTTAGCACCTaGACAGCAGAGGTCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: RPFPLTRKNGSVRGTLHIFNLST*TAEVFT Trigger: TGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAA...TATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGTTGTTCTGTTGTATTTaGACAACAGAAGGGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: IFFIYVHFLSQGKMAVSELFCCI*TTEGKV Trigger: GACTTTCCCTTCTGTTGTGCAAATACAACAGAACAA...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| 3UTR-3UTR GCA 90 bp | AATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTTTTAGTGTTGTCTTTACAATTCATTaGATATGCTCTCCCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NGSVRGTLHIACSLSFSVVFTIH*ICSPLL Trigger: GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGAC...AACACTAAAAGAGAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| 3UTR-3UTR CAA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCCTTTGTTTTGTTCTGTaGTATTTGCACAACAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LTRKNGSVRGTLHIACSLLCFVL*YLHNRR Trigger: CCTTCTGTTGTGCAAATACAACAGAACAAAACAAAG...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | GGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATTTGGTCTGTCCCAGCTaGCTCCTGGCGGGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GQRSHQLKASHNSETLLHLVCPS*LLAGGL Trigger: CAGCCCTCCCGCCAGGAGCCAGCTGGGACAGACCAA...ATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | AGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCATGAGGGGCACTGGGTaGCGGACCAGGTCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: STCTAEVFTIHCICSPLLMRGTG*RTRSLL Trigger: AAGGAGAGACCTGGTCCGTCACCCAGTGCCCCTCAT...GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGAGCAGGAGCCACAGAGTaGGATGTTGGCCAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TAPEAKEATNSKLHTILRAGATE*DVGQAA Trigger: TGCAGCCTGGCCAACATCTCACTCTGTGGCTCCTGC...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | TTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCCTGGCGGGAGGGCTaGACTGAGATACGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LAPAQQRSLQFIAYALPFSWREG*TEIRPH Trigger: ATGGGGCCGTATCTCAGTGCAGCCCTCCCGCCAGGA...GAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | AGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATGACAGAATAGTCCCAGCTGGCTCCTaGCGGGAGGGCTGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SHQLKASHNSETLLHDRIVPAGS*REGCTE Trigger: CTCAGTGCAGCCCTCCCGCCAGGAGCCAGCTGGGAC...TATTCTGTCATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | AGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCGGCGCTGGCACAGTGTaGTGCTACCATGGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: STCTAEVFTIHCICSPLLGAGTV*CYHGTH Trigger: GTGTGTGCCATGGTAGCACCACACTGTGCCAGCGCC...GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCCATGGGATAGGGCGCTaGCACAGTGTGGTGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: PEAKEATNSKLHTILRPFHGIGR*HSVVLP Trigger: TGGTAGCACCACACTGTGCCAGCGCCCTATCCCATG...GAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTGGCCAGGCTGCACATaGCACAGCTGTTGTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PEAKEATNSKLHTILRPFWPGCT*HSCCSH Trigger: GTGGGAACAACAGCTGTGCCATGTGCAGCCTGGCCA...GAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGAAGGATAGGTAGCTCCTaGAGTGGTGGAAAGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: TAPEAKEATNSKLHTILRRIGSS*SGGKAP Trigger: GGGGGCCTTTCCACCACTCCAGGAGCTACCTATCCT...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | AGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCCTCTCTCTAGGCAGCTaGTGGTTGGGATTGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: STCTAEVFTIHCICSPLLLSLGS*WLGLWR Trigger: CCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAG...GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCCATGGAGCCTTCTCATaGTGCCATCACGGTCGACAA | + |
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Preference number: 4 (lower is better) Translates to: PEAKEATNSKLHTILRPFHGAFS*CHHGRQ Trigger: TTGTCGACCGTGATGGCACCATGAGAAGGCTCCATG...GAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGATCATTGCCCCAGTGCTaGTGGATGCTGCCAATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAPEAKEATNSKLHTILRSLPQC*WMLPIV Trigger: GACGATTGGCAGCATCCACCAGCACTGGGGCAATGA...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGAGCCTCTGAGCCTCAGTaGCACTCTGTAGGAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TAPEAKEATNSKLHTILRASEPQ*HSVGAC Trigger: ACAAGCTCCTACAGAGTGCCACTGAGGCTCAGAGGC...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | AGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCTCTCATTGCGTAGGGTaGGTAGCCGAGTCCGACTAC | + |
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Preference number: 4 (lower is better) Translates to: STCTAEVFTIHCICSPLLSHCVG*VAESDY Trigger: GTAGTCGGACTCGGCTACCCACCCTACGCAATGAGA...GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | CCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCGGCCTTGGCCATGTTTaGCAGCGTAAACTCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: PEAKEATNSKLHTILRPFGLGHV*QRKLHD Trigger: ATCATGGAGTTTACGCTGGCAAACATGGCCAAGGCC...GAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGAAGTGCTGGTGGATGCTaGCAATCGTCAGGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: TAPEAKEATNSKLHTILRSAGGC*QSSGSG Trigger: ACCACTTCCTGACGATTGGCAGCATCCACCAGCACT...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCGCAGAGATGAGCAGGTaGGTGCCGTACTTTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: PEAKEATNSKLHTILRPFAEMSR*VPYFLM Trigger: CATCAAAAAGTACGGCACCCACCTGCTCATCTCTGC...GAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | CGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCGGGAGGGCTGCACTaGGATACGGCCCCATACAAA | + |
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Preference number: 4 (lower is better) Translates to: RPFPLTRKNGSVRGTLHIAGGLH*DTAPYK Trigger: TTTGTATGGGGCCGTATCTCAGTGCAGCCCTCCCGC...TATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | GGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATTGGATTTTCTGCCTCTaGGCCTCAGTGGCACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GQRSHQLKASHNSETLLHWIFCL*ASVALC Trigger: ACAGAGTGCCACTGAGGCTCAGAGGCAGAAAATCCA...ATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | TATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACCTGGCCAGTCTCATTaGGTAGGGTGGGTAGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: YLRPFPLTRKNGSVRGTLPGQSH*VGWVAE Trigger: CTCGGCTACCCACCCTACGCAATGAGACTGGCCAGG...TAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | CGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATATGGTGGTTGGGATTGTaGCGGCAGCGCACACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RPFPLTRKNGSVRGTLHIWWLGL*RQRTLR Trigger: CCTCAGTGTGCGCTGCCGCCACAATCCCAACCACCA...TATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | AGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATGACAGAATATCTCTAGGCAGCTGGTaGTTGGGATTGTGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SHQLKASHNSETLLHDRISLGSW*LGLWRQ Trigger: CTGCCGCCACAATCCCAACCACCAGCTGCCTAGAGA...TATTCTGTCATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | CGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAAGACGGATGCTCCTTTaGAACTCCGGCATGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RPFPLTRKNGSVRGTLHIRRMLL*NSGMRG Trigger: GCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGTCT...TATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTTGGGTAGCATTCCCTaGCTTCCGGTCCAGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: LTRKNGSVRGTLHIACSLLGSIP*LPVQAT Trigger: AGTCGCCTGGACCGGAAGTCAGGGAATGCTACCCAA...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGGGCCAGGCGGTTaGTTCGGTCCCGAATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSEGPGG*FGPECP Trigger: TGGACATTCGGGACCGAATCAACCGCCTGGCCCCTC...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | TTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCGGTCTCTCCTTTCTATaGCTGTGTTCCTCACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LAPAQQRSLQFIAYALPFGLSFL*LCSSPS Trigger: GGAAGGTGAGGAACACAGCCATAGAAAGGAGAGACC...GAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | GAAGAAATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGCGGCATGAGGGGCACTaGGTGACGGACCAGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: EEISSLSTSISSHKEKWQRHEGH*VTDQVS Trigger: AGAGACCTGGTCCGTCACCCAGTGCCCCTCATGCCG...CTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATTTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | GGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATGTAAACTCCATGATCTaGATGTCGGTGATGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GQRSHQLKASHNSETLLHVNSMI*MSVMGQ Trigger: CTGCCCCATCACCGACATCCAGATCATGGAGTTTAC...ATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | GAAGAAATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGAGGTCCACCGGGCCCTaGCCAGTCTCATTGCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EEISSLSTSISSHKEKWQRSTGP*PVSLRR Trigger: CCTACGCAATGAGACTGGCCAGGGCCCGGTGGACCT...CTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATTTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCCATGTTCCAGCCTTCTaGATGGCTCCCACTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTRKNGSVRGTLHIACSLHVPAF*MAPTEG Trigger: CCCTTCAGTGGGAGCCATTCAGAAGGCTGGAACATG...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | CCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCGTACATCAGAGATCTTaGTGTAGAACTGCCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PEAKEATNSKLHTILRPFVHQRS*CRTAFW Trigger: CCAAAAGGCAGTTCTACATCAAGATCTCTGATGTAC...GAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | CGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATACAGTCATTGCCCCAGTaGTGGTGGATGCTGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: RPFPLTRKNGSVRGTLHIQSLPQ*WWMLPI Trigger: GATTGGCAGCATCCACCAGCACTGGGGCAATGACTG...TATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | TTAGTGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATAGCAGGTCCCAGTCATTaGCCCAGTGCTGGTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: LVFNLSTCTAEVFTIHCIAGPSH*PSAGGC Trigger: GCATCCACCAGCACTGGGGCAATGACTGGGACCTGC...TATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGCTGGCACAGTGTGGTaGTACCATGGCACACACAAC | + |
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Preference number: 4 (lower is better) Translates to: IFFIYVHFLSQGKMAVSEAGTVW*YHGTHN Trigger: GTTGTGTGTGCCATGGTAGCACCACACTGTGCCAGC...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGTCCTTGGAGACATGTTaGTCTGTCCCAGCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IFFIYVHFLSQGKMAVSESLETC*SVPAGS Trigger: GGAGCCAGCTGGGACAGACCAACATGTCTCCAAGGA...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCAACTCCTCAGCACACTaGCAGCGACACTGGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LTRKNGSVRGTLHIACSLNSSAH*QRHWLF Trigger: GAACAGCCAGTGTCGCTGCCAGTGTGCTGAGGAGTT...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGAAGTTTGGCTGTCATCTaGTCAGACTGTTTGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: TAPEAKEATNSKLHTILRSLAVI*SDCLRI Trigger: GATCCTCAAACAGTCTGACCAGATGACAGCCAAACT...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR TCA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCATTTGAAACTCCGGCATaGGGGGCACTGGGTGACGGA | + |
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Preference number: 4 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSFETPA*GALGDG Trigger: TCCGTCACCCAGTGCCCCTCATGCCGGAGTTTCAAA...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | GGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATCTGGTTGTAAATCCTTaGCGGTGTCTTTCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: GQRSHQLKASHNSETLLHLVVNP*RCLSTK Trigger: CTTTGTGGAAAGACACCGGCAAGGATTTACAACCAG...ATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGAGATGTTGGCCAGGCTaGACATGGCACAGCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: IFFIYVHFLSQGKMAVSERCWPG*TWHSCC Trigger: ACAACAGCTGTGCCATGTGCAGCCTGGCCAACATCT...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR GCA 90 bp | GAAGAAATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGGGTCCAGGCTGCTGTTaGGCATCTGGCAGATACGCA | + |
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Preference number: 4 (lower is better) Translates to: EEISSLSTSISSHKEKWQGPGCC*ASGRYA Trigger: TGCGTATCTGCCAGATGCGCAACAGCAGCCTGGACC...CTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATTTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS-3UTR CCA 90 bp | GAAGAAATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGGGGGCAGTTGCACTGTaGGAACTCCTCAGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: EEISSLSTSISSHKEKWQGAVAL*ELLSTL Trigger: CAGTGTGCTGAGGAGTTCCCACAGTGCAACTGCCCC...CTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATTTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTTTTAGTGTTTTGCCCCAGTGCTGGTaGATGCTGCCAATCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGSVRGTLHIACSLSFSVLPQCW*MLPIVR Trigger: CCTGACGATTGGCAGCATCCACCAGCACTGGGGCAA...AACACTAAAAGAGAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCAGTGTGGTGCTACCATaGCACACACAACTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRKNGSVRGTLHIACSLSVVLP*HTQLLW Trigger: CCAGAGGAGTTGTGTGTGCCATGGTAGCACCACACT...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | AGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATGACAGAATAATGGACATAGAGGCGTaGATCCATCTTCTGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SHQLKASHNSETLLHDRIMDIEA*IHLLQQ Trigger: CTGTTGCAGAAGATGGATTCACGCCTCTATGTCCAT...TATTCTGTCATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTTGCCAAGCAGACGGATaGTCCTTTGAAACTCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYACQADG*SFETPA Trigger: TGCCGGAGTTTCAAAGGAGCATCCGTCTGCTTGGCA...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | TATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTAGCAGTTTGCTCTCCGTaGTTTGCAGAAGGACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLRPFPLTRKNGSVRGTLAVCSP*FAEGQN Trigger: GTTCTGTCCTTCTGCAAAGCACGGAGAGCAAACTGC...TAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGCTGCTGTTGCGCATCTaGCAGATACGCATGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: IFFIYVHFLSQGKMAVSELLLRI*QIRMDI Trigger: AATGTCCATGCGTATCTGCCAGATGCGCAACAGCAG...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGTATCAATGAACTGCTaGGTGGTGGGTCTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSVSMNC*VVGLLP Trigger: TGGCAGGAGACCCACCACTCAGCAGTTCATTGATAC...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCCTCTCCATTGCACATaGTGTAACTCAAGGCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYAPLHCT*CNSRPT Trigger: AGTCGGCCTTGAGTTACATCATGTGCAATGGAGAGG...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | AGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATGACAGAATATCTGGTCAGACTGTTTaGGGATCTCAGTGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHQLKASHNSETLLHDRISGQTV*GSQCCR Trigger: TCTACAACACTGAGATCCTCAAACAGTCTGACCAGA...TATTCTGTCATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTTCAAAGCTGATGAACTaGTCACTCCGCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYASKLMN*SLRSES Trigger: GGACTCTGAGCGGAGTGAGCAGTTCATCAGCTTTGA...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTGTCAGCTTCAGGCGGTaGTTCAGCATACAGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYAVSFRR*FSIQEN Trigger: GTTTTCCTGTATGCTGAAGCACCGCCTGAAGCTGAC...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGAAATCTGGATCTCATaGAGCCTTCTCATGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFFIYVHFLSQGKMAVSEEIWIS*SLLMVP Trigger: TGGCACCATGAGAAGGCTCCATGAGATCCAGATTTC...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTTTTAGTGTTGTCGACAAAGTAGGATaGTGCAAGCTGGTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGSVRGTLHIACSLSFSVVDKVG*CKLVQS Trigger: GCTTTGCACCAGCTTGCATCATCCTACTTTGTCGAC...AACACTAAAAGAGAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTATTGCAATAGAGAAGTaGCTGGACCCTTGCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYAIAIEK*LDPCKP Trigger: TGGCTTGCAAGGGTCCAGTCACTTCTCTATTGCAAT...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTTTTAGTGTTGCTTGTAGCCCTTATTaGAGGAGCCACAGAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGSVRGTLHIACSLSFSVACSPY*RSHRVR Trigger: TCTCACTCTGTGGCTCCTGCAATAAGGGCTACAAGC...AACACTAAAAGAGAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTGCTCCAGTTGAAATCTaGATCTCATGGAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYAAPVEI*ISWSLL Trigger: GAGAAGGCTCCATGAGATCCAGATTTCAACTGGAGC...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCATTCAGTTCCAAGTCCTaGAAGTCCAGGTCGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSFSSKS*KSRSVS Trigger: TGAGACCGACCTGGACTTCCAGGACTTGGAACTGAA...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAAATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTTCCAGCCTTCTGAATaGCTCCCACTGAAGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: EEISSLSTSISSHKEKWQFQPSE*LPLKGL Trigger: CAATCCCTTCAGTGGGAGCCATTCAGAAGGCTGGAA...CTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCATGTAGAACTGCCTTTTaGAGGGATCCGACAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSCRTAF*RDPTGP Trigger: TGGACCTGTCGGATCCCTCCAAAAGGCAGTTCTACA...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTGAAAGGCCCCCTGTCTaGAATAAGCCAATCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYAERPPV*NKPIKF Trigger: GAATTTGATTGGCTTATTTCAGACAGGGGGCCTTTC...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTGATGATGCAAGCTGGTaGAAAGCTTCAACACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYADDASW*KASTLW Trigger: CCAAAGTGTTGAAGCTTTGCACCAGCTTGCATCATC...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | TTAGTGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATACTTGAAGGTGCAGTTTaGTCTCCGTGCTTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVFNLSTCTAEVFTIHCILEGAV*SPCFAE Trigger: TTCTGCAAAGCACGGAGAGCAAACTGCACCTTCAAG...TATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTAAGTTTTCCACCGATTaGCCAGCAAGAGAGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLILAPAQQRSLQFIAYAKFSTD*PARESN Trigger: ATTGGACTCTCTTGCTGGGCAATCGGTGGAAAACTT...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAAGAGTCCACGTTTTGTaGTTCACAGCGGCCTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSRVHVL*FTAASI Trigger: TATAGAGGCCGCTGTGAACCACAAAACGTGGACTCT...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCATCTGGCAGATACGCATaGACATTCCGATCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSSGRYA*TFRSPC Trigger: ACATGGTGATCGGAATGTCCATGCGTATCTGCCAGA...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTTTTAGTGTTCTTGATTGCTCCAGTTaGAATCTGGATCTCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGSVRGTLHIACSLSFSVLDCSS*NLDLME Trigger: CTCCATGAGATCCAGATTTCAACTGGAGCAATCAAG...AACACTAAAAGAGAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTTTTAGTGTTATTCCGATCACCATGTaGATAAAGTCCATGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSVRGTLHIACSLSFSVIPITM*IKSMRF Trigger: GAACCGCATGGACTTTATCCACATGGTGATCGGAAT...AACACTAAAAGAGAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTTTTAGTGTTAAAGCTTCAACACTTTaGGTAGCATTCCCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSVRGTLHIACSLSFSVKASTL*VAFPDF Trigger: GAAGTCAGGGAATGCTACCCAAAGTGTTGAAGCTTT...AACACTAAAAGAGAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | GATCCGACAGGTCCACCGGGCCCTGGCCAGTCTCATTGCGTAGGGTaGGTAGCCGAGTCCGACTACGTAGGTAGATATGGACAGTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: DPTGPPGPGQSHCVG*VAESDYVGRYGQSR Trigger: TCGAGACTGTCCATATCTACCTACGTAGTCGGACTCGGCTACCCACCCTACGCAATGAGACTGGCCAGGGCCCGGTGGACCTGTCGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 90 bp | TGGGTCTCCTGCCAAGCAGACGGATGCTCCTTTGAAACTCCGGCATaGGGGGCACTGGGTGACGGACCAGGTCTCTCCTTTCTATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WVSCQADGCSFETPA*GALGDGPGLSFLWL Trigger: CAGCCATAGAAAGGAGAGACCTGGTCCGTCACCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGTCTGCTTGGCAGGAGACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS GCA 90 bp | TTTTGGAGGGATCCGACAGGTCCACCGGGCCCTGGCCAGTCTCATTaGGTAGGGTGGGTAGCCGAGTCCGACTACGTAGGTAGATATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FWRDPTGPPGPGQSH*VGWVAESDYVGRYG Trigger: TCCATATCTACCTACGTAGTCGGACTCGGCTACCCACCCTACGCAATGAGACTGGCCAGGGCCCGGTGGACCTGTCGGATCCCTCCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS GCA 90 bp | TGGCACTCTGTAGGAGCTTGTAACGGCTCTGCAGGTCCCAGTCATTaGCCCAGTGCTGGTGGATGCTGCCAATCGTCAGGAAGTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WHSVGACNGSAGPSH*PSAGGCCQSSGSGC Trigger: GCAACCACTTCCTGACGATTGGCAGCATCCACCAGCACTGGGGCAATGACTGGGACCTGCAGAGCCGTTACAAGCTCCTACAGAGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | GCCAAGCAGACGGATGCTCCTTTGAAACTCCGGCATGAGGGGCACTaGGTGACGGACCAGGTCTCTCCTTTCTATGGCTGTGTTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AKQTDAPLKLRHEGH*VTDQVSPFYGCVPH Trigger: GTGAGGAACACAGCCATAGAAAGGAGAGACCTGGTCCGTCACCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGTCTGCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | GGCCAGGCTGCACATGGCACAGCTGTTGTTCCCACCTATGATACATaGGATAGGGCGCTGGCACAGTGTGGTGCTACCATGGCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: GQAAHGTAVVPTYDT*DRALAQCGATMAHT Trigger: TGTGTGTGCCATGGTAGCACCACACTGTGCCAGCGCCCTATCCCATGTATCATAGGTGGGAACAACAGCTGTGCCATGTGCAGCCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 90 bp | GACATGTTGGTCTGTCCCAGCTGGCTCCTGGCGGGAGGGCTGCACTaGGATACGGCCCCATACAAACAGGAAGTAGAGGAGCTCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DMLVCPSWLLAGGLH*DTAPYKQEVEELNK Trigger: TTTGTTGAGCTCCTCTACTTCCTGTTTGTATGGGGCCGTATCTCAGTGCAGCCCTCCCGCCAGGAGCCAGCTGGGACAGACCAACATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | CGTAAACTCCATGATCTGGATGTCGGTGATGGGGCAGTTGCACTGTaGGAACTCCTCAGCACACTGGCAGCGACACTGGCTGTTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RKLHDLDVGDGAVAL*ELLSTLAATLAVLT Trigger: TGTCAGAACAGCCAGTGTCGCTGCCAGTGTGCTGAGGAGTTCCCACAGTGCAACTGCCCCATCACCGACATCCAGATCATGGAGTTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS GCA 90 bp | CGTTTTGTGGTTCACAGCGGCCTCTATACAGCTTGTAGCCCTTATTaGAGGAGCCACAGAGTGAGATGTTGGCCAGGCTGCACATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RFVVHSGLYTACSPY*RSHRVRCWPGCTWH Trigger: GTGCCATGTGCAGCCTGGCCAACATCTCACTCTGTGGCTCCTGCAATAAGGGCTACAAGCTGTATAGAGGCCGCTGTGAACCACAAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS GCA 90 bp | AGTTCCAAGTCCTGGAAGTCCAGGTCGGTCTCAAAGCTGATGAACTaGTCACTCCGCTCAGAGTCCACGTTTTGTGGTTCACAGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSKSWKSRSVSKLMN*SLRSESTFCGSQRP Trigger: AGGCCGCTGTGAACCACAAAACGTGGACTCTGAGCGGAGTGAGCAGTTCATCAGCTTTGAGACCGACCTGGACTTCCAGGACTTGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGAGGGTCCAGGCTGCTGTaGCGCATCTGGCAGATACGC | + |
|
Preference number: 5 (lower is better) Translates to: TAPEAKEATNSKLHTILRGSRLL*RIWQIR Trigger: GCGTATCTGCCAGATGCGCAACAGCAGCCTGGACCC...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCCCCTGGCCAGTCTCATaGCGTAGGGTGGGTAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: STCTAEVFTIHCICSPLLPWPVS*RRVGSR Trigger: TCGGCTACCCACCCTACGCAATGAGACTGGCCAGGG...GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCTGCAGGTCCCAGTCATaGCCCCAGTGCTGGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: STCTAEVFTIHCICSPLLCRSQS*PQCWWM Trigger: CATCCACCAGCACTGGGGCAATGACTGGGACCTGCA...GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCCCACAGAGTGAGATGTaGGCCAGGCTGCACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEAKEATNSKLHTILRPFPQSEM*ARLHMA Trigger: TGCCATGTGCAGCCTGGCCAACATCTCACTCTGTGG...GAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | GGCCCAGTGCGTGTTTCTGTGACCTTGATTGCTCCAGTTGAAATCTaGATCTCATGGAGCCTTCTCATGGTGCCATCACGGTCGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPVRVSVTLIAPVEI*ISWSLLMVPSRSTK Trigger: CTTTGTCGACCGTGATGGCACCATGAGAAGGCTCCATGAGATCCAGATTTCAACTGGAGCAATCAAGGTCACAGAAACACGCACTGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | AGGCGTGAATCCATCTTCTGCAACAGGTACTTCAGTTCCAAGTCCTaGAAGTCCAGGTCGGTCTCAAAGCTGATGAACTGCTCACTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRESIFCNRYFSSKS*KSRSVSKLMNCSLR Trigger: GCGGAGTGAGCAGTTCATCAGCTTTGAGACCGACCTGGACTTCCAGGACTTGGAACTGAAGTACCTGTTGCAGAAGATGGATTCACGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 90 bp | CTCATGGAGCCTTCTCATGGTGCCATCACGGTCGACAAAGTAGGATaGTGCAAGCTGGTGCAAAGCTTCAACACTTTGGGTAGCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LMEPSHGAITVDKVG*CKLVQSFNTLGSIP Trigger: GGGAATGCTACCCAAAGTGTTGAAGCTTTGCACCAGCTTGCATCATCCTACTTTGTCGACCGTGATGGCACCATGAGAAGGCTCCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | CTCAAAGCTGATGAACTGCTCACTCCGCTCAGAGTCCACGTTTTGTaGTTCACAGCGGCCTCTATACAGCTTGTAGCCCTTATTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LKADELLTPLRVHVL*FTAASIQLVALIAG Trigger: TCCTGCAATAAGGGCTACAAGCTGTATAGAGGCCGCTGTGAACCACAAAACGTGGACTCTGAGCGGAGTGAGCAGTTCATCAGCTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | CGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATACTAGGCAGCTGGTGGTaGGGATTGTGGCGGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPFPLTRKNGSVRGTLHILGSWW*GLWRQR Trigger: GCGCTGCCGCCACAATCCCAACCACCAGCTGCCTAG...TATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGGAGGGGCCAGGCGGTaGATTCGGTCCCGAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFFIYVHFLSQGKMAVSEGGARR*IRSRMS Trigger: GGACATTCGGGACCGAATCAACCGCCTGGCCCCTCC...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 90 bp | CCAACGAGGGTAGCCAAATTCCCCAAAGGGCATGTTCCAGCCTTCTaGATGGCTCCCACTGAAGGGATTGACATAGACAAAGAACATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTRVAKFPKGHVPAF*MAPTEGIDIDKEHR Trigger: CCTATGTTCTTTGTCTATGTCAATCCCTTCAGTGGGAGCCATTCAGAAGGCTGGAACATGCCCTTTGGGGAATTTGGCTACCCTCGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 90 bp | GCGGTTGATTCGGTCCCGAATGTCCAACATGAGAAGCATCACGGATaGGGAGGAATAGAACTGACCACCCTGTGTATAGGACTGATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVDSVPNVQHEKHHG*GGIELTTLCIGLIH Trigger: GTGAATCAGTCCTATACACAGGGTGGTCAGTTCTATTCCTCCTCATCCGTGATGCTTCTCATGTTGGACATTCGGGACCGAATCAACCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | CTGTTGCGCATCTGGCAGATACGCATGGACATTCCGATCACCATGTaGATAAAGTCCATGCGGTTCTTGTTGCTTTTGAGAGTGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLRIWQIRMDIPITM*IKSMRFLLLLRVRD Trigger: GTCCCTCACTCTCAAAAGCAACAAGAACCGCATGGACTTTATCCACATGGTGATCGGAATGTCCATGCGTATCTGCCAGATGCGCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCAGCTGGTGGTTGGGATaGTGGCGGCAGCGCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LTRKNGSVRGTLHIACSLSWWLG*WRQRTL Trigger: CAGTGTGCGCTGCCGCCACAATCCCAACCACCAGCT...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 90 bp | TTCCAGGAAGGTTCCCCAGAACCCATTCTCATTGCAATAGAGAAGTaGCTGGACCCTTGCAAGCCACTGTTGAATTGTCCTCTCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQEGSPEPILIAIEK*LDPCKPLLNCPLSR Trigger: CCTAGAGAGAGGACAATTCAACAGTGGCTTGCAAGGGTCCAGTCACTTCTCTATTGCAATGAGAATGGGTTCTGGGGAACCTTCCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 90 bp | CAGTCATTGCCCCAGTGCTGGTGGATGCTGCCAATCGTCAGGAAGTaGTTGCTTGGGAGACGCTTCATAAATGACTTAAACTCATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QSLPQCWWMLPIVRK*LLGRRFINDLNSSE Trigger: TTCAGATGAGTTTAAGTCATTTATGAAGCGTCTCCCAAGCAACCACTTCCTGACGATTGGCAGCATCCACCAGCACTGGGGCAATGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | ACAGCACCTGAGGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGAGAAGTGACTGGACCCTaGCAAGCCACTGTTGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: TAPEAKEATNSKLHTILREVTGP*QATVEL Trigger: CAATTCAACAGTGGCTTGCAAGGGTCCAGTCACTTC...TCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCCTCAGGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | TTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCCCTTGCAAGCCACTGTaGAATTGTCCTCTCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAPAQQRSLQFIAYALPFPCKPL*NCPLSR Trigger: CCTAGAGAGAGGACAATTCAACAGTGGCTTGCAAGG...GAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | TGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTGTGAGGGACATGCGCTaGCGCCACCGAGGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLILAPAQQRSLQFIAYAVRDMR*RHRGSK Trigger: TTTTGACCCTCGGTGGCGCAAGCGCATGTCCCTCAC...AGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATATGCTCTCCCCTTCTCAAAGTTTTCCACCGATaGCCCAGCAAGAGAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: STCTAEVFTIHCICSPLLKVFHR*PSKRVQ Trigger: TTGGACTCTCTTGCTGGGCAATCGGTGGAAAACTTT...GAGAAGGGGAGAGCATATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGTTCCTTGGAGACATGTaGGTCTGTCCCAGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IFFIYVHFLSQGKMAVSEFLGDM*VCPSWL Trigger: GAGCCAGCTGGGACAGACCAACATGTCTCCAAGGAA...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGCTCAGAGTCCACGTTTaGTGGTTCACAGCGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IFFIYVHFLSQGKMAVSELRVHV*WFTAAS Trigger: AGAGGCCGCTGTGAACCACAAAACGTGGACTCTGAG...CTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATGACAGAATACGGTTCTTGTTGCTTTaGAGAGTGAGGGACATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SHQLKASHNSETLLHDRIRFLLL*RVRDMR Trigger: GCGCATGTCCCTCACTCTCAAAAGCAACAAGAACCG...TATTCTGTCATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCCGTAGGAGGTCAGCATaGAACCTCAGGCTGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTRKNGSVRGTLHIACSLRRRSA*NLRLYP Trigger: TGGGTACAGCCTGAGGTTCAATGCTGACCTCCTACG...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | GAAGAAATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGCAGACGGATGCTCCTTaGAAACTCCGGCATGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EEISSLSTSISSHKEKWQQTDAP*KLRHEG Trigger: CCCCTCATGCCGGAGTTTCAAAGGAGCATCCGTCTG...CTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATTTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | GGCCAAAGAAGCCACCAACTCAAAGCTTCACACAATTCTGAGACCCTTCTTCATCGTGTTTCTGTGACCTaGATTGCTCCAGTTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: GQRSHQLKASHNSETLLHRVSVT*IAPVEI Trigger: GATTTCAACTGGAGCAATCAAGGTCACAGAAACACG...ATGAAGAAGGGTCTCAGAATTGTGTGAAGCTTTGAGTTGGTGGCTTCTTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | TATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACTGATAATCTCACTGTaGGTCAGCTTCAGGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLRPFPLTRKNGSVRGTLLIISL*VSFRRC Trigger: GCACCGCCTGAAGCTGACCAACAGTGAGATTATCAG...TAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | CGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATACGGTCCAGGCGACTTTaGTCCATGTACATGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPFPLTRKNGSVRGTLHIRSRRL*SMYMVK Trigger: TTTGACCATGTACATGGACAAAAGTCGCCTGGACCG...TATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | TATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTATCCAGGCGAATCTCATaGCTGATGAAGGTAGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: YLRPFPLTRKNGSVRGTLSRRIS*LMKVVW Trigger: CCATACTACCTTCATCAGCAATGAGATTCGCCTGGA...TAATGTACCTCTGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCTCTGGTTGTAAATCCTaGCCGGTGTCTTTCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTRKNGSVRGTLHIACSLSGCKS*PVSFHK Trigger: TTTGTGGAAAGACACCGGCAAGGATTTACAACCAGA...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCATTTGCTCTCCGTGCTTaGCAGAAGGACAGAACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSFALRA*QKDRTH Trigger: GTGAGTTCTGTCCTTCTGCAAAGCACGGAGAGCAAA...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | CTCACAAGGAAAAATGGCAGTGTCAGAGGTACATTACATATAGCTTGTTCTCTCGATTATCTGAAGACCTaGAAGGTGCAGTTTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTRKNGSVRGTLHIACSLDYLKT*KVQFAL Trigger: GAGAGCAAACTGCACCTTCAAGGTCTTCAGATAATC...GAGAGAACAAGCTATATGTAATGTACCTCTGACACTGCCATTTTTCCTTGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | GAAGAAATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTCCATGCGGTTCTTGTaGCTTTTGAGAGTGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EEISSLSTSISSHKEKWQSMRFL*LLRVRD Trigger: GTCCCTCACTCTCAAAAGCAACAAGAACCGCATGGA...CTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAGTAGCATTGGCTGTTTaGCAGACGGATCTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSVALAV*QTDLLP Trigger: TGGGAGAAGATCCGTCTGCAAAACAGCCAATGCTAC...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCAAAGTCCATGCGGTTCTaGTTGCTTTTGAGAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSKSMRF*LLLRVR Trigger: CCTCACTCTCAAAAGCAACAAGAACCGCATGGACTT...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATAAGCCAATCAAATTCCTaGGAGACATGTTGGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVFNLSTCTAEVFTIHCISQSNS*ETCWSV Trigger: GACAGACCAACATGTCTCCAAGGAATTTGATTGGCT...TATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCACTGAACAAACTTCTCTaGCAGATACTGCGGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSLNKLL*QILRED Trigger: ATCTTCCCGCAGTATCTGCAAGAGAAGTTTGTTCAG...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTTAATCTTAGCACCTGCACAGCAGAGGTCTTTACAATTCATTGCATAAGTCCAATTGTAGCATaGGCTGTTTTGCAGACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVFNLSTCTAEVFTIHCISPIVA*AVLQTD Trigger: ATCCGTCTGCAAAACAGCCAATGCTACAATTGGACT...TATGCAATGAATTGTAAAGACCTCTGCTGTGCAGGTGCTAAGATTAAACACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS-3UTR CAA 90 bp | AATATCTTCTTTATCTACGTCCATTTCCTCTCACAAGGAAAAATGGCAGTGTCATGGGTGCCGTACTTTTaGATGATGGTATCAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NIFFIYVHFLSQGKMAVSWVPYF*MMVSMN Trigger: GTTCATTGATACCATCATCAAAAAGTACGGCACCCA...TGACACTGCCATTTTTCCTTGTGAGAGGAAATGGACGTAGATAAAGAAGATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CAA 72 bp | GGATCCGACAGGTCCACCGGGCCCTGGCCAGTCTCATaGCGTAGGGTGGGTAGCCGAGTCCGACTACGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSDRSTGPWPVS*RRVGSRVRLRR Trigger: CCTACGTAGTCGGACTCGGCTACCCACCCTACGCAATGAGACTGGCCAGGGCCCGGTGGACCTGTCGGATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS GCA 72 bp | GATCCGACAGGTCCACCGGGCCCTGGCCAGTCTCATTaGGTAGGGTGGGTAGCCGAGTCCGACTACGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DPTGPPGPGQSH*VGWVAESDYVG Trigger: ACCTACGTAGTCGGACTCGGCTACCCACCCTACGCAATGAGACTGGCCAGGGCCCGGTGGACCTGTCGGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 72 bp | TGCCTTTTGGAGGGATCCGACAGGTCCACCGGGCCCTaGCCAGTCTCATTGCGTAGGGTGGGTAGCCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CLLEGSDRSTGP*PVSLRRVGSRV Trigger: GACTCGGCTACCCACCCTACGCAATGAGACTGGCCAGGGCCCGGTGGACCTGTCGGATCCCTCCAAAAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 72 bp | GCAGCTGGTGGTTGGGATTGTGGCGGCAGCGCACACTaGGGCCAAAGAGCTTGCGGGCGGTCCTCTGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: AAGGWDCGGSAH*GQRACGRSSGF Trigger: AAATCCAGAGGACCGCCCGCAAGCTCTTTGGCCTCAGTGTGCGCTGCCGCCACAATCCCAACCACCAGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS TCA 72 bp | GTCTGTCCCAGCTGGCTCCTGGCGGGAGGGCTGCACTaGGATACGGCCCCATACAAACAGGAAGTAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VCPSWLLAGGLH*DTAPYKQEVEE Trigger: CTCCTCTACTTCCTGTTTGTATGGGGCCGTATCTCAGTGCAGCCCTCCCGCCAGGAGCCAGCTGGGACAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CAA 72 bp | AGTGGTGGGTCTCCTGCCAAGCAGACGGATGCTCCTTaGAAACTCCGGCATGAGGGGCACTGGGTGACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGGSPAKQTDAP*KLRHEGHWVTD Trigger: GTCCGTCACCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGTCTGCTTGGCAGGAGACCCACCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CAA 90 bp | GAACTGCTGAGTGGTGGGTCTCCTGCCAAGCAGACGGATGCTCCTTaGAAACTCCGGCATGAGGGGCACTGGGTGACGGACCAGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELLSGGSPAKQTDAP*KLRHEGHWVTDQVS Trigger: AGAGACCTGGTCCGTCACCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGTCTGCTTGGCAGGAGACCCACCACTCAGCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 72 bp | ATTGTCCTCTCTCTAGGCAGCTGGTGGTTGGGATTGTaGCGGCAGCGCACACTGAGGCCAAAGAGCTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: IVLSLGSWWLGL*RQRTLRPKSLR Trigger: CCGCAAGCTCTTTGGCCTCAGTGTGCGCTGCCGCCACAATCCCAACCACCAGCTGCCTAGAGAGAGGACAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS GCA 72 bp | GTAGGAGCTTGTAACGGCTCTGCAGGTCCCAGTCATTaGCCCAGTGCTGGTGGATGCTGCCAATCGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VGACNGSAGPSH*PSAGGCCQSSG Trigger: TCCTGACGATTGGCAGCATCCACCAGCACTGGGGCAATGACTGGGACCTGCAGAGCCGTTACAAGCTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 72 bp | CATGATCTGGATGTCGGTGATGGGGCAGTTGCACTGTaGGAACTCCTCAGCACACTGGCAGCGACACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HDLDVGDGAVAL*ELLSTLAATLA Trigger: AGCCAGTGTCGCTGCCAGTGTGCTGAGGAGTTCCCACAGTGCAACTGCCCCATCACCGACATCCAGATCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CAA 90 bp | GAGTGGTGGAAAGGCCCCCTGTCTGAAATAAGCCAATCAAATTCCTaGGAGACATGTTGGTCTGTCCCAGCTGGCTCCTGGCGGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EWWKGPLSEISQSNS*ETCWSVPAGSWREG Trigger: GCCCTCCCGCCAGGAGCCAGCTGGGACAGACCAACATGTCTCCAAGGAATTTGATTGGCTTATTTCAGACAGGGGGCCTTTCCACCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CAA 90 bp | GAGCCACAGAGTGAGATGTTGGCCAGGCTGCACATGGCACAGCTGTaGTTCCCACCTATGATACATGGGATAGGGCGCTGGCACAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EPQSEMLARLHMAQL*FPPMIHGIGRWHSV Trigger: CACACTGTGCCAGCGCCCTATCCCATGTATCATAGGTGGGAACAACAGCTGTGCCATGTGCAGCCTGGCCAACATCTCACTCTGTGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 72 bp | ACGGATGCTCCTTTGAAACTCCGGCATGAGGGGCACTaGGTGACGGACCAGGTCTCTCCTTTCTATGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TDAPLKLRHEGH*VTDQVSPFYGC Trigger: ACAGCCATAGAAAGGAGAGACCTGGTCCGTCACCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS GCA 72 bp | GTTCACAGCGGCCTCTATACAGCTTGTAGCCCTTATTaGAGGAGCCACAGAGTGAGATGTTGGCCAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VHSGLYTACSPY*RSHRVRCWPGC Trigger: GCAGCCTGGCCAACATCTCACTCTGTGGCTCCTGCAATAAGGGCTACAAGCTGTATAGAGGCCGCTGTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
||
| CDS CCA 72 bp | GCCTTGGCCATGTTTGCCAGCGTAAACTCCATGATCTaGATGTCGGTGATGGGGCAGTTGCACTGTGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ALAMFASVNSMI*MSVMGQLHCGN Trigger: GTTCCCACAGTGCAACTGCCCCATCACCGACATCCAGATCATGGAGTTTACGCTGGCAAACATGGCCAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | GCACATGGCACAGCTGTTGTTCCCACCTATGATACATaGGATAGGGCGCTGGCACAGTGTGGTGCTACCATG | + |
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Preference number: 6 (lower is better) Translates to: AHGTAVVPTYDT*DRALAQCGATM Trigger: CATGGTAGCACCACACTGTGCCAGCGCCCTATCCCATGTATCATAGGTGGGAACAACAGCTGTGCCATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | TGGGTAGCATTCCCTGACTTCCGGTCCAGGCGACTTTaGTCCATGTACATGGTCAAAGCCTCCTCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: WVAFPDFRSRRL*SMYMVKASSPP Trigger: GGGAGGAGAGGAGGCTTTGACCATGTACATGGACAAAAGTCGCCTGGACCGGAAGTCAGGGAATGCTACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 90 bp | CGCATGGACATTCCGATCACCATGTGGATAAAGTCCATGCGGTTCTaGTTGCTTTTGAGAGTGAGGGACATGCGCTTGCGCCACCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RMDIPITMWIKSMRF*LLLRVRDMRLRHRG Trigger: CCCTCGGTGGCGCAAGCGCATGTCCCTCACTCTCAAAAGCAACAAGAACCGCATGGACTTTATCCACATGGTGATCGGAATGTCCATGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | GCTGATGAACTGCTCACTCCGCTCAGAGTCCACGTTTaGTGGTTCACAGCGGCCTCTATACAGCTTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: ADELLTPLRVHV*WFTAASIQLVA Trigger: GGCTACAAGCTGTATAGAGGCCGCTGTGAACCACAAAACGTGGACTCTGAGCGGAGTGAGCAGTTCATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | ACCATGTGGATAAAGTCCATGCGGTTCTTGTTGCTTTaGAGAGTGAGGGACATGCGCTTGCGCCACCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: TMWIKSMRFLLL*RVRDMRLRHRG Trigger: CCCTCGGTGGCGCAAGCGCATGTCCCTCACTCTCAAAAGCAACAAGAACCGCATGGACTTTATCCACATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS TCA 72 bp | TCACCTGTTGCACGGCACTTCGTAGGAGGTCAGCATTaGACCTCAGGCTGTACCCAAACACCTGTACATCAG | + |
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Preference number: 6 (lower is better) Translates to: SPVARHFVGGQH*TSGCTQTPVHQ Trigger: CTGATGTACAGGTGTTTGGGTACAGCCTGAGGTTCAATGCTGACCTCCTACGAAGTGCCGTGCAACAGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS GCA 72 bp | TCCTGGAAGTCCAGGTCGGTCTCAAAGCTGATGAACTaGTCACTCCGCTCAGAGTCCACGTTTTGTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SWKSRSVSKLMN*SLRSESTFCGS Trigger: TGAACCACAAAACGTGGACTCTGAGCGGAGTGAGCAGTTCATCAGCTTTGAGACCGACCTGGACTTCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | GATGAACTGCTCACTCCGCTCAGAGTCCACGTTTTGTaGTTCACAGCGGCCTCTATACAGCTTGTAGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: DELLTPLRVHVL*FTAASIQLVAL Trigger: AAGGGCTACAAGCTGTATAGAGGCCGCTGTGAACCACAAAACGTGGACTCTGAGCGGAGTGAGCAGTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | ACAAAGAACATAGGGTCCAGGCTGCTGTTGCGCATCTaGCAGATACGCATGGACATTCCGATCACCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: TKNIGSRLLLRI*QIRMDIPITMW Trigger: CCACATGGTGATCGGAATGTCCATGCGTATCTGCCAGATGCGCAACAGCAGCCTGGACCCTATGTTCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | CCGATCACCATGTGGATAAAGTCCATGCGGTTCTTGTaGCTTTTGAGAGTGAGGGACATGCGCTTGCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PITMWIKSMRFL*LLRVRDMRLRH Trigger: GTGGCGCAAGCGCATGTCCCTCACTCTCAAAAGCAACAAGAACCGCATGGACTTTATCCACATGGTGATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 90 bp | ATGGACATTCCGATCACCATGTGGATAAAGTCCATGCGGTTCTTGTaGCTTTTGAGAGTGAGGGACATGCGCTTGCGCCACCGAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: MDIPITMWIKSMRFL*LLRVRDMRLRHRGS Trigger: TGACCCTCGGTGGCGCAAGCGCATGTCCCTCACTCTCAAAAGCAACAAGAACCGCATGGACTTTATCCACATGGTGATCGGAATGTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 90 bp | TCAACACTTTGGGTAGCATTCCCTGACTTCCGGTCCAGGCGACTTTaGTCCATGTACATGGTCAAAGCCTCCTCTCCTCCCAATGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: STLWVAFPDFRSRRL*SMYMVKASSPPNVA Trigger: TGCTACATTGGGAGGAGAGGAGGCTTTGACCATGTACATGGACAAAAGTCGCCTGGACCGGAAGTCAGGGAATGCTACCCAAAGTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 90 bp | GGTCTCAAAGCTGATGAACTGCTCACTCCGCTCAGAGTCCACGTTTaGTGGTTCACAGCGGCCTCTATACAGCTTGTAGCCCTTATTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLKADELLTPLRVHV*WFTAASIQLVALIA Trigger: TGCAATAAGGGCTACAAGCTGTATAGAGGCCGCTGTGAACCACAAAACGTGGACTCTGAGCGGAGTGAGCAGTTCATCAGCTTTGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 90 bp | CCACCGATTGCCCAGCAAGAGAGTCCAATTGTAGCATTGGCTGTTTaGCAGACGGATCTTCTCCCAACGAGGGTAGCCAAATTCCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: PPIAQQESPIVALAV*QTDLLPTRVAKFPK Trigger: TTTGGGGAATTTGGCTACCCTCGTTGGGAGAAGATCCGTCTGCAAAACAGCCAATGCTACAATTGGACTCTCTTGCTGGGCAATCGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS TCA 72 bp | GTGCCGTACTTTTTGATGATGGTATCAATGAACTGCTaGGTGGTGGGTCTCCTGCCAAGCAGACGGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: VPYFLMMVSMNC*VVGLLPSRRML Trigger: GAGCATCCGTCTGCTTGGCAGGAGACCCACCACTCAGCAGTTCATTGATACCATCATCAAAAAGTACGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS GCA 72 bp | ACCCTGATAATCTCACTGTTGGTCAGCTTCAGGCGGTaGTTCAGCATACAGGAAAACAAGTCCAGCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: TLIISLLVSFRR*FSIQENKSSWG Trigger: ACCCCAGCTGGACTTGTTTTCCTGTATGCTGAAGCACCGCCTGAAGCTGACCAACAGTGAGATTATCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | CCCCAGTGCTGGTGGATGCTGCCAATCGTCAGGAAGTaGTTGCTTGGGAGACGCTTCATAAATGACTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: PQCWWMLPIVRK*LLGRRFINDLN Trigger: GTTTAAGTCATTTATGAAGCGTCTCCCAAGCAACCACTTCCTGACGATTGGCAGCATCCACCAGCACTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | GCCCAGCAAGAGAGTCCAATTGTAGCATTGGCTGTTTaGCAGACGGATCTTCTCCCAACGAGGGTAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: AQQESPIVALAV*QTDLLPTRVAK Trigger: TTTGGCTACCCTCGTTGGGAGAAGATCCGTCTGCAAAACAGCCAATGCTACAATTGGACTCTCTTGCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | TTCACCTGTTGCACGGCACTTCGTAGGAGGTCAGCATaGAACCTCAGGCTGTACCCAAACACCTGTACATCA | + |
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Preference number: 6 (lower is better) Translates to: FTCCTALRRRSA*NLRLYPNTCTS Trigger: TGATGTACAGGTGTTTGGGTACAGCCTGAGGTTCAATGCTGACCTCCTACGAAGTGCCGTGCAACAGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | AGGTCCAAGGCATGGTTCACCCTGATAATCTCACTGTaGGTCAGCTTCAGGCGGTGCTTCAGCATACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RSKAWFTLIISL*VSFRRCFSIQE Trigger: TTCCTGTATGCTGAAGCACCGCCTGAAGCTGACCAACAGTGAGATTATCAGGGTGAACCATGCCTTGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS TCA 72 bp | CCTTCTCATGGTGCCATCACGGTCGACAAAGTAGGATaGTGCAAGCTGGTGCAAAGCTTCAACACTTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PSHGAITVDKVG*CKLVQSFNTLG Trigger: ACCCAAAGTGTTGAAGCTTTGCACCAGCTTGCATCATCCTACTTTGTCGACCGTGATGGCACCATGAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS TCA 72 bp | TCGGTCCCGAATGTCCAACATGAGAAGCATCACGGATaGGGAGGAATAGAACTGACCACCCTGTGTATAGGA | + |
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Preference number: 6 (lower is better) Translates to: SVPNVQHEKHHG*GGIELTTLCIG Trigger: TCCTATACACAGGGTGGTCAGTTCTATTCCTCCTCATCCGTGATGCTTCTCATGTTGGACATTCGGGACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS GCA 72 bp | GCGGGAAGATTATCTGAAGACCTTGAAGGTGCAGTTTaGTCTCCGTGCTTTGCAGAAGGACAGAACTCACAG | + |
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Preference number: 6 (lower is better) Translates to: AGRLSEDLEGAV*SPCFAEGQNSQ Trigger: CTGTGAGTTCTGTCCTTCTGCAAAGCACGGAGAGCAAACTGCACCTTCAAGGTCTTCAGATAATCTTCCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | GCCTCCTCTCCTCCCAATGTAGCAGAGATGAGCAGGTaGGTGCCGTACTTTTTGATGATGGTATCAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: ASSPPNVAEMSR*VPYFLMMVSMN Trigger: GTTCATTGATACCATCATCAAAAAGTACGGCACCCACCTGCTCATCTCTGCTACATTGGGAGGAGAGGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | GTGACCTTGATTGCTCCAGTTGAAATCTGGATCTCATaGAGCCTTCTCATGGTGCCATCACGGTCGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: VTLIAPVEIWIS*SLLMVPSRSTK Trigger: CTTTGTCGACCGTGATGGCACCATGAGAAGGCTCCATGAGATCCAGATTTCAACTGGAGCAATCAAGGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | TCCATCTTCTGCAACAGGTACTTCAGTTCCAAGTCCTaGAAGTCCAGGTCGGTCTCAAAGCTGATGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: SIFCNRYFSSKS*KSRSVSKLMNC Trigger: GCAGTTCATCAGCTTTGAGACCGACCTGGACTTCCAGGACTTGGAACTGAAGTACCTGTTGCAGAAGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | ATTCCGATCACCATGTGGATAAAGTCCATGCGGTTCTaGTTGCTTTTGAGAGTGAGGGACATGCGCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: IPITMWIKSMRF*LLLRVRDMRLR Trigger: GCGCAAGCGCATGTCCCTCACTCTCAAAAGCAACAAGAACCGCATGGACTTTATCCACATGGTGATCGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS TCA 72 bp | GGTTCCCCAGAACCCATTCTCATTGCAATAGAGAAGTaGCTGGACCCTTGCAAGCCACTGTTGAATTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GSPEPILIAIEK*LDPCKPLLNCP Trigger: AGGACAATTCAACAGTGGCTTGCAAGGGTCCAGTCACTTCTCTATTGCAATGAGAATGGGTTCTGGGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS GCA 72 bp | CAGTTGAAATCTGGATCTCATGGAGCCTTCTCATGGTaGCATCACGGTCGACAAAGTAGGATGATGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: QLKSGSHGAFSW*HHGRQSRMMQA Trigger: AGCTTGCATCATCCTACTTTGTCGACCGTGATGGCACCATGAGAAGGCTCCATGAGATCCAGATTTCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | CTCCAGTTGAAATCTGGATCTCATGGAGCCTTCTCATaGTGCCATCACGGTCGACAAAGTAGGATGATGCAA | + |
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Preference number: 6 (lower is better) Translates to: LQLKSGSHGAFS*CHHGRQSRMMQ Trigger: TTGCATCATCCTACTTTGTCGACCGTGATGGCACCATGAGAAGGCTCCATGAGATCCAGATTTCAACTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 90 bp | TCATTGCCCCAGTGCTGGTGGATGCTGCCAATCGTCAGGAAGTGGTaGCTTGGGAGACGCTTCATAAATGACTTAAACTCATCTGAATTC | + |
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Preference number: 6 (lower is better) Translates to: SLPQCWWMLPIVRKW*LGRRFINDLNSSEF Trigger: GAATTCAGATGAGTTTAAGTCATTTATGAAGCGTCTCCCAAGCAACCACTTCCTGACGATTGGCAGCATCCACCAGCACTGGGGCAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 90 bp | TCCATTGCACATGATGTAACTCAAGGCCGACTGAACAAACTTCTCTaGCAGATACTGCGGGAAGATTATCTGAAGACCTTGAAGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SIAHDVTQGRLNKLL*QILREDYLKTLKVQ Trigger: CTGCACCTTCAAGGTCTTCAGATAATCTTCCCGCAGTATCTGCAAGAGAAGTTTGTTCAGTCGGCCTTGAGTTACATCATGTGCAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CCA 72 bp | ATCTGGCAGATACGCATGGACATTCCGATCACCATGTaGATAAAGTCCATGCGGTTCTTGTTGCTTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: IWQIRMDIPITM*IKSMRFLLLLR Trigger: TCTCAAAAGCAACAAGAACCGCATGGACTTTATCCACATGGTGATCGGAATGTCCATGCGTATCTGCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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| CDS CAA 72 bp | CATGATGTAACTCAAGGCCGACTGAACAAACTTCTCTaGCAGATACTGCGGGAAGATTATCTGAAGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: HDVTQGRLNKLL*QILREDYLKTL Trigger: CAAGGTCTTCAGATAATCTTCCCGCAGTATCTGCAAGAGAAGTTTGTTCAGTCGGCCTTGAGTTACATCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030036.6 |
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