Pregenerated sensors for BRI3BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037905Ensembl transcript IDs: ENSMUST00000049040.14, ENSMUST00000198811.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAACCTCACCTGGTTCTCCAGGTGTTCCAGCTTCTCCTCCACACTaGGGCTGCAAAGGCCACCGGGGCTGCCCCGCCAGTAGCCCATGG | + |
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Preference number: 1 (lower is better) Translates to: ATSPGSPGVPASPPH*GCKGHRGCPASSPW Trigger: CCATGGGCTACTGGCGGGGCAGCCCCGGTGGCCTTTGCAGCCCCAGTGTGGAGGAGAAGCTGGAACACCTGGAGAACCAGGTGAGGTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
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| 3UTR TCA 90 bp | CTTCCTGGTCACGCTGTTTCCGAGCCATCTGTGAGCAGGCCGGAGTaGCAGGACCACGTGAGCAAGCAGAGCTCTTCACACACAGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LPGHAVSEPSVSRPE*QDHVSKQSSSHTGP Trigger: GGGCCCTGTGTGTGAAGAGCTCTGCTTGCTCACGTGGTCCTGTCACTCCGGCCTGCTCACAGATGGCTCGGAAACAGCGTGACCAGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | TCCAGGTGCGCACCAGGCTCACCAATGCTGGCTTTCTGGGCATGGTaGTGCACAACTTTAAGCCTGGTACTTGGGAGGCAGAGGCGAGCA | + |
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Preference number: 1 (lower is better) Translates to: SRCAPGSPMLAFWAW*CTTLSLVLGRQRRA Trigger: TGCTCGCCTCTGCCTCCCAAGTACCAGGCTTAAAGTTGTGCACCACCATGCCCAGAAAGCCAGCATTGGTGAGCCTGGTGCGCACCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | CTCTTAACATGCATAGGCCGCGTTCACCCCAAGGCGTTCGAACAATaGGGGCGTAGTCACATGTGCACATCATTCCTGCACTCGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LLTCIGRVHPKAFEQ*GRSHMCTSFLHSGW Trigger: CCAGCCCGAGTGCAGGAATGATGTGCACATGTGACTACGCCCCCATTGTTCGAACGCCTTGGGGTGAACGCGGCCTATGCATGTTAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | TCAGGAGCCCAGGACTTGAAGGTAAAGAGGCTGAGAGGGTCGCCTTaGAAATTCCTTGTAGCTCCAGGTGCGCACCAGGCTCACCAATGC | + |
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Preference number: 1 (lower is better) Translates to: SGAQDLKVKRLRGSP*KFLVAPGAHQAHQC Trigger: GCATTGGTGAGCCTGGTGCGCACCTGGAGCTACAAGGAATTTCCAAGGCGACCCTCTCAGCCTCTTTACCTTCAAGTCCTGGGCTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | AAAGACAGAACTTCACAGACATACGGCACCAGAGCTGCCATCAGCTaGGTCCCCCTCCAAGCTCAAGTTGGGACTCAGTGGCTCCACAGT | + |
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Preference number: 1 (lower is better) Translates to: KDRTSQTYGTRAAIS*VPLQAQVGTQWLHS Trigger: ACTGTGGAGCCACTGAGTCCCAACTTGAGCTTGGAGGGGGACCCAGCTGATGGCAGCTCTGGTGCCGTATGTCTGTGAAGTTCTGTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | GCCATCTCTAAAACCCCGAACCATAGGGCCAGAGAGGCTGCTCAGTaGTTAGAGCACACCGGCTGTTCTTCCAAACAACCTGGGTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: AISKTPNHRAREAAQ*LEHTGCSSKQPGFD Trigger: GTCAAACCCAGGTTGTTTGGAAGAACAGCCGGTGTGCTCTAACCACTGAGCAGCCTCTCTGGCCCTATGGTTCGGGGTTTTAGAGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | TCCCTCAGAGGTTCTCATGAGGTCCCTAGGAAAGACATGCCTTCCTaGTTGCTTATTCACAGCTCTGCTCCTAACCCCCTGTGGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SLRGSHEVPRKDMPS*LLIHSSAPNPLWPA Trigger: AGCAGGCCACAGGGGGTTAGGAGCAGAGCTGTGAATAAGCAACCAGGAAGGCATGTCTTTCCTAGGGACCTCATGAGAACCTCTGAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR TCA 90 bp | CCTCGCTGGCCAACAGGGAATGTGAGATTCAGCTGGATTCTGGAATaGTCTTCGGGGCCTACCCGGTTCTTAGCATCAAACTCCAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: PRWPTGNVRFSWILE*SSGPTRFLASNSKD Trigger: GTCTTTGGAGTTTGATGCTAAGAACCGGGTAGGCCCCGAAGATCATTCCAGAATCCAGCTGAATCTCACATTCCCTGTTGGCCAGCGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR TCA 90 bp | CCTGGCTGGCCTTCAAATAGCAGCAATCCTCCTGCCTCTGCCTCCTaGATACTGGGTGGAGTTGCAGTCTTAGCTACAGTGGACTGTATA | + |
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Preference number: 1 (lower is better) Translates to: PGWPSNSSNPPASAS*ILGGVAVLATVDCI Trigger: TATACAGTCCACTGTAGCTAAGACTGCAACTCCACCCAGTATTCAGGAGGCAGAGGCAGGAGGATTGCTGCTATTTGAAGGCCAGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR GCA 90 bp | TTCACCATGTTGGTCCCGGGAATCAAACTCAGGTTTGGTGGCAAGTaGCTTTCTTCATTGAGCCATATCGCCTGCCCCGCCCCTTATCTA | + |
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Preference number: 1 (lower is better) Translates to: FTMLVPGIKLRFGGK*LSSLSHIACPAPYL Trigger: TAGATAAGGGGCGGGGCAGGCGATATGGCTCAATGAAGAAAGGCACTTGCCACCAAACCTGAGTTTGATTCCCGGGACCAACATGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | CACGTAGACCAGGATGGCTTTGAACTCAGCACCTTCCTATCTATCTaGAGACTGAGTCCTGGGTTTGCAAAGCACATCGGGCTTCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: HVDQDGFELSTFLSI*RLSPGFAKHIGLPG Trigger: ACCAGGAAGCCCGATGTGCTTTGCAAACCCAGGACTCAGTCTCCAGATAGATAGGAAGGTGCTGAGTTCAAAGCCATCCTGGTCTACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR GCA 90 bp | CGGTTCCAGAAGGGAATGAAATTCAAGAAAATGAGAGTCCCATACTaGCTGTCACCTCGAGAACAGAGGTCTCTCTCGGCCACATCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RFQKGMKFKKMRVPY*LSPREQRSLSATSS Trigger: TGAGGATGTGGCCGAGAGAGACCTCTGTTCTCGAGGTGACAGGCAGTATGGGACTCTCATTTTCTTGAATTTCATTCCCTTCTGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR GCA 90 bp | TGGTGCAACACCTTTAATACCAGCAATCAGAGGCAGGTGGATCTCTaGAAGTTAGAGGGCAGCCTGGTTTACACAGAGAGTTGCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: WCNTFNTSNQRQVDL*KLEGSLVYTESCRT Trigger: TGTCCTGCAACTCTCTGTGTAAACCAGGCTGCCCTCTAACTTGCAGAGATCCACCTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR GCA 90 bp | CTACTGGGGGCTATGATTACTTCCAAACAATGCCAGGCATGGTGGTaGAACACCTTTAATACCAGCAATCAGAGGCAGGTGGATCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLGAMITSKQCQAWW*NTFNTSNQRQVDLC Trigger: GCAGAGATCCACCTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTGGCATTGTTTGGAAGTAATCATAGCCCCCAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR TCA 90 bp | CCATCCATGTCCTTTCTTCCTGGAAAGGCTAGGGTTAATCTACATTaGAGTCCAGAGAAGAGAAAGAGATCTCGGGACGTCTGTGGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PSMSFLPGKARVNLH*SPEKRKRSRDVCGY Trigger: GTACCCACAGACGTCCCGAGATCTCTTTCTCTTCTCTGGACTTCAATGTAGATTAACCCTAGCCTTTCCAGGAAGAAAGGACATGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR GCA 90 bp | TATATATGTATTTATTGGGGCCAAGGGGTGGGAAGCCACAGCCCATaGGTAGAGGTTAGAAGGAAACCTGTGGGAGTGGTCTGTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: YICIYWGQGVGSHSP*VEVRRKPVGVVCLF Trigger: AAAAAGACAGACCACTCCCACAGGTTTCCTTCTAACCTCTACGCATGGGCTGTGGCTTCCCACCCCTTGGCCCCAATAAATACATATATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CCA 90 bp | TTAGCTACAGTGGACTGTATAGGAATCGACCTACAACATCTCAAGTaGCCACTGAGAGGAGCCAAGGCAAGAAGGTTTAGCTTTACAGAG | + |
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Preference number: 1 (lower is better) Translates to: LATVDCIGIDLQHLK*PLRGAKARRFSFTE Trigger: CTCTGTAAAGCTAAACCTTCTTGCCTTGGCTCCTCTCAGTGGCCACTTGAGATGTTGTAGGTCGATTCCTATACAGTCCACTGTAGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR TCA 90 bp | AAATGGTCAAACTCAAAAACATTACAGAATTATCACAGGTTGCTTTaGAAGCAGCTTTCATGCTGGGGGCAGAGCTCAGGAGCCCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: KWSNSKTLQNYHRLL*KQLSCWGQSSGAQD Trigger: GTCCTGGGCTCCTGAGCTCTGCCCCCAGCATGAAAGCTGCTTTCAAAGCAACCTGTGATAATTCTGTAATGTTTTTGAGTTTGACCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR GCA 90 bp | TTCGTAGAATCAGCTTCCCAATTAATGTTTGCGCATGTGCGTGTGTaGACACACCCCACTATGTTCACACGGAATGGCTTTCTTTCTACT | + |
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Preference number: 1 (lower is better) Translates to: FVESASQLMFAHVRV*THPTMFTRNGFLST Trigger: AGTAGAAAGAAAGCCATTCCGTGTGAACATAGTGGGGTGTGTGCACACACGCACATGCGCAAACATTAATTGGGAAGCTGATTCTACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR GCA 90 bp | TACATAAATGGTCAAACTCAAAAACATTACAGAATTATCACAGGTTaGTTTGAAAGCAGCTTTCATGCTGGGGGCAGAGCTCAGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: YINGQTQKHYRIITG*FESSFHAGGRAQEP Trigger: GGGCTCCTGAGCTCTGCCCCCAGCATGAAAGCTGCTTTCAAAGCAACCTGTGATAATTCTGTAATGTTTTTGAGTTTGACCATTTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR TCA 90 bp | GGTGTTCCAGCTTCTCCTCCACACTGGGGCTGCAAAGGCCACCGGGGCTGCCCCACATGGAGAACAGGATaGCACGCACGAGCCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GVPASPPHWGCKGHRGCPTWRTG*HARARR Trigger: TCTTCTGGCTCGTGCGTGTCATCCTGTTCTCCATGT...GGGGCAGCCCCGGTGGCCTTTGCAGCCCCAGTGTGGAGGAGAAGCTGGAACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTATTGGGGCCAAGGGGTGGGAAGCCACAGCCCATGCGTAGAGGTTAGAAGGTGTGCACATCATTCCTaGACTCGGGCTGGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: IYWGQGVGSHSPCVEVRRCAHHS*TRAGGR Trigger: CCTGCCCCCAGCCCGAGTGCAGGAATGATGTGCACA...CCTTCTAACCTCTACGCATGGGCTGTGGCTTCCCACCCCTTGGCCCCAATAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CAA 90 bp | CTCAGGAGCCCAGGACTTGAAGGTAAAGAGGCTGAGAGGGTCGCCTaGGAAATTCCTTGTAGCTCCAGGTGCGCACCAGGCTCACCAATG | + |
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Preference number: 2 (lower is better) Translates to: LRSPGLEGKEAERVA*EIPCSSRCAPGSPM Trigger: CATTGGTGAGCCTGGTGCGCACCTGGAGCTACAAGGAATTTCCAAGGCGACCCTCTCAGCCTCTTTACCTTCAAGTCCTGGGCTCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGCGGATGTTAAGCAACCTCACCTGGTTCTCCAGGTGTTCCAGCTTCTCCCCATGGGCCCCGTCATaGAGTAGATGGCCACCACGA | + |
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Preference number: 2 (lower is better) Translates to: LRRMLSNLTWFSRCSSFSPWAPS*SRWPPR Trigger: TCGTGGTGGCCATCTACTTCATGACGGGGCCCATGG...GGAGAAGCTGGAACACCTGGAGAACCAGGTGAGGTTGCTTAACATCCGCCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGGTCGAGCCTCAACAAAGGGCCCAAAGGGTGGGGGATGCTAGCAACAACAATTCCAGGGCGATCTaGCACCCTCTTCTCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KRVEPQQRAQRVGDASNNNSRAI*HPLLLS Trigger: AGAGAGGAGAAGAGGGTGTCAGATCGCCCTGGAATT...GTTGTTGCTAGCATCCCCCACCCTTTGGGCCCTTTGTTGAGGCTCGACCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | CACAAAAGCCAGCTCTCTTTCCACAGAAGCTGGCAGAGAGGTCTCTGCACCCAGAGGGTTGGGATTTGGTaGGGTTGCCGGCTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HKSQLSFHRSWQRGLCTQRVGIW*GCRLFS Trigger: AGAGAAGAGCCGGCAACCCCACCAAATCCCAACCCT...CTGGGTGCAGAGACCTCTCTGCCAGCTTCTGTGGAAAGAGAGCTGGCTTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGGTCGAGCCTCAACAAAGGGCCCAAAGGGTGGGGGATGCTAGCAACAACGTTTATTGGGAGGGTTaGGATTTGGTGGGGTTGCCG | + |
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Preference number: 2 (lower is better) Translates to: KRVEPQQRAQRVGDASNNVYWEG*DLVGLP Trigger: CGGCAACCCCACCAAATCCCAACCCTCCCAATAAAC...GTTGTTGCTAGCATCCCCCACCCTTTGGGCCCTTTGTTGAGGCTCGACCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | ATTTATTGGGGCCAAGGGGTGGGAAGCCACAGCCCATGCGTAGAGGTTAGAAGGTGCTCTCTCCTCCAGTaGCTCCTAAGGTCGACACAC | + |
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Preference number: 2 (lower is better) Translates to: IYWGQGVGSHSPCVEVRRCSLLQ*LLRSTH Trigger: GTGTGTCGACCTTAGGAGCCACTGGAGGAGAGAGCA...CCTTCTAACCTCTACGCATGGGCTGTGGCTTCCCACCCCTTGGCCCCAATAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | TCGCCTGCCCCGCCCCTTATCTATAATAGATCCACAGTGGCTGCTGTCCAAATGAAATCCGCCTGCCTCTaGCTCCAGAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: SPAPPLIYNRSTVAAVQMKSACL*LQSAGI Trigger: AATCCCAGCACTCTGGAGGCAGAGGCAGGCGGATTT...CATTTGGACAGCAGCCACTGTGGATCTATTATAGATAAGGGGCGGGGCAGGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATGGTGGTGCAACACCTTTAATACCAGCAATCAGAGGCAGGTGGATCTCCAATCCTCCTGCCTCTaGCTCCTGAATACTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QAWWCNTFNTSNQRQVDLQSSCL*LLNTGW Trigger: CCACCCAGTATTCAGGAGGCAGAGGCAGGAGGATTG...GAGATCCACCTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCTCTCTTTCCACAGAAGCTGGCAGAGAGGTCTCTGCACCCAGGGGTTTGATTCAGCTGGATTCTaGAATGATCTTCGGGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SQLSFHRSWQRGLCTQGFDSAGF*NDLRGL Trigger: TAGGCCCCGAAGATCATTCCAGAATCCAGCTGAATC...AAACCCCTGGGTGCAGAGACCTCTCTGCCAGCTTCTGTGGAAAGAGAGCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | AGACTGGCTTTAAACTCCGATGTGCCTGCCTCTGCTCTCTTGTGCTACCATACCCCTCCAAGCTCAAGTTaGGACTCAGTGGCTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: RLALNSDVPASALLCYHTPPSSS*DSVAPQ Trigger: CTGTGGAGCCACTGAGTCCCAACTTGAGCTTGGAGG...GGTATGGTAGCACAAGAGAGCAGAGGCAGGCACATCGGAGTTTAAAGCCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | AGACTGGCTTTAAACTCCGATGTGCCTGCCTCTGCTCTCTTGTGCTACCATACCGGGATTTGGTGGGGTTaGCGGCTCTTCTCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RLALNSDVPASALLCYHTGIWWG*RLFSSS Trigger: AGAAGAAGAGAAGAGCCGGCAACCCCACCAAATCCC...GGTATGGTAGCACAAGAGAGCAGAGGCAGGCACATCGGAGTTTAAAGCCAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATGGTGGTGCAACACCTTTAATACCAGCAATCAGAGGCAGGTGGATCTCGGTGATCTACGAAAGTaGTCTCTCCTCCAGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: QAWWCNTFNTSNQRQVDLGDLRK*SLLQWL Trigger: GAGCCACTGGAGGAGAGAGCACTTTCGTAGATCACC...GAGATCCACCTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | AGACTGGCTTTAAACTCCGATGTGCCTGCCTCTGCTCTCTTGTGCTACCATACCTGGCAGAGAGGTCTCTaGACCCAGGGGTTTAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: RLALNSDVPASALLCYHTWQRGL*TQGFSY Trigger: ATAGCTAAACCCCTGGGTGCAGAGACCTCTCTGCCA...GGTATGGTAGCACAAGAGAGCAGAGGCAGGCACATCGGAGTTTAAAGCCAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | TCGCCTGCCCCGCCCCTTATCTATAATAGATCCACAGTGGCTGCTGTCCAAATGCTACAACATCTCAAGTaGCCACTGAGAGGAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SPAPPLIYNRSTVAAVQMLQHLK*PLRGAK Trigger: CTTGGCTCCTCTCAGTGGCCACTTGAGATGTTGTAG...CATTTGGACAGCAGCCACTGTGGATCTATTATAGATAAGGGGCGGGGCAGGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | ATTTATTGGGGCCAAGGGGTGGGAAGCCACAGCCCATGCGTAGAGGTTAGAAGGGAAGGTATCCAGGACTaGACTCTTGAGTGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: IYWGQGVGSHSPCVEVRREGIQD*TLECSL Trigger: AAGAGAGCACTCAAGAGTCCAGTCCTGGATACCTTC...CCTTCTAACCTCTACGCATGGGCTGTGGCTTCCCACCCCTTGGCCCCAATAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | TTTCACCATGTTGGTCCCGGGAATCAAACTCAGGTTTGGTGGCAAGTGCCTTTCGGAAGACGAAGAGATTaGACACGGTGCTCACCCACA | + |
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Preference number: 2 (lower is better) Translates to: FHHVGPGNQTQVWWQVPFGRRRD*TRCSPT Trigger: TGTGGGTGAGCACCGTGTGCAATCTCTTCGTCTTCC...GAAAGGCACTTGCCACCAAACCTGAGTTTGATTCCCGGGACCAACATGGTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | CACAAAAGCCAGCTCTCTTTCCACAGAAGCTGGCAGAGAGGTCTCTGCACCCAGGGGAAATACCAGGCGTaGCGTTTTTGCTCAGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: HKSQLSFHRSWQRGLCTQGKYQA*RFCSVY Trigger: ATAAACTGAGCAAAAACGCCACGCCTGGTATTTCCC...CTGGGTGCAGAGACCTCTCTGCCAGCTTCTGTGGAAAGAGAGCTGGCTTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | TTTCACCATGTTGGTCCCGGGAATCAAACTCAGGTTTGGTGGCAAGTGCCTTTCTCTTTCCACAGAAGCTaGCAGAGAGGTCTCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: FHHVGPGNQTQVWWQVPFSFHRS*QRGLCT Trigger: GGTGCAGAGACCTCTCTGCCAGCTTCTGTGGAAAGA...GAAAGGCACTTGCCACCAAACCTGAGTTTGATTCCCGGGACCAACATGGTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGGTCGAGCCTCAACAAAGGGCCCAAAGGGTGGGGGATGCTAGCAACAACTTCAGATCTCAAGGTTaGTTATGCCTACGAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: KRVEPQQRAQRVGDASNNFRSQG*LCLRMF Trigger: GAACATTCGTAGGCATAAGCAACCTTGAGATCTGAA...GTTGTTGCTAGCATCCCCCACCCTTTGGGCCCTTTGTTGAGGCTCGACCCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR CCA 90 bp | CAGGCATGGTGGTGCAACACCTTTAATACCAGCAATCAGAGGCAGGTGGATCTCCTCCTGAATACTGGGTaGAGTTGCAGTCTTAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: QAWWCNTFNTSNQRQVDLLLNTG*SCSLSY Trigger: GTAGCTAAGACTGCAACTCCACCCAGTATTCAGGAG...GAGATCCACCTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATGGTGGTGCAACACCTTTAATACCAGCAATCAGAGGCAGGTGGATCTCACTCCAAAGACAGTTTaGAGCTCCATCCATGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QAWWCNTFNTSNQRQVDLTPKTV*SSIHVL Trigger: AAGGACATGGATGGAGCTGCAAACTGTCTTTGGAGT...GAGATCCACCTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR GCA 90 bp | GCTGTTCTTCCAAACAACCTGGGTTTGACTTTTTCAGCATCCACAAGGCAGCTGAAACTCCGATGTGCCTaGCTCTGCTCTCTTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: AVLPNNLGLTFSASTRQLKLRCA*LCSLVL Trigger: TAGCACAAGAGAGCAGAGGCAGGCACATCGGAGTTT...CAGCTGCCTTGTGGATGCTGAAAAAGTCAAACCCAGGTTGTTTGGAAGAACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR-3UTR TCA 90 bp | TCGCCTGCCCCGCCCCTTATCTATAATAGATCCACAGTGGCTGCTGTCCAAATGAGGGTTAATCTACATTaGAGTCCAGAGAAGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SPAPPLIYNRSTVAAVQMRVNLH*SPEKRK Trigger: CTTTCTCTTCTCTGGACTTCAATGTAGATTAACCCT...CATTTGGACAGCAGCCACTGTGGATCTATTATAGATAAGGGGCGGGGCAGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR GCA 90 bp | GAATGTGAGATTCAGCTGGATTCTGGAATGATCTTCGGGGCCTACCCGGTTCTTCCGTTGTTTAAAAACTaGTTTCCCACTGGTGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: ECEIQLDSGMIFGAYPVLPLFKN*FPTGDL Trigger: TAGATCACCAGTGGGAAAGCAGTTTTTAAACAACGG...AAGAACCGGGTAGGCCCCGAAGATCATTCCAGAATCCAGCTGAATCTCACATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTTCTTCCAAACAACCTGGGTTTGACTTTTTCAGCATCCACAAGGCAGCTGAAACAATGCCAGGCATaGTGGTGCAACACCTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: AVLPNNLGLTFSASTRQLKQCQA*WCNTFN Trigger: ATTAAAGGTGTTGCACCACCATGCCTGGCATTGTTT...CAGCTGCCTTGTGGATGCTGAAAAAGTCAAACCCAGGTTGTTTGGAAGAACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CAA 90 bp | TGGCTGCTGTCCAAATGTTTATCATGTTATTCGGTTAAGGAGGAGTaGTACACAGCCCTGAAGATAAGGCATGAAATAAGGTACAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: WLLSKCLSCYSVKEE*YTALKIRHEIRYKN Trigger: ATTTTTGTACCTTATTTCATGCCTTATCTTCAGGGCTGTGTACAACTCCTCCTTAACCGAATAACATGATAAACATTTGGACAGCAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | AGCTGCCATCAGCTGGGTCCCCCTCCAAGCTCAAGTTaGGACTCAGTGGCTCCACAGTCCTCACGGGCGACC | + |
|
Preference number: 3 (lower is better) Translates to: SCHQLGPPPSSS*DSVAPQSSRAT Trigger: GGTCGCCCGTGAGGACTGTGGAGCCACTGAGTCCCAACTTGAGCTTGGAGGGGGACCCAGCTGATGGCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | CACGCTGTTTCCGAGCCATCTGTGAGCAGGCCGGAGTaGCAGGACCACGTGAGCAAGCAGAGCTCTTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: HAVSEPSVSRPE*QDHVSKQSSSH Trigger: GTGTGAAGAGCTCTGCTTGCTCACGTGGTCCTGTCACTCCGGCCTGCTCACAGATGGCTCGGAAACAGCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | GCCGGCTATCTGGGCCTCGCTGGCCAACAGGGAATGTaGGATTCAGCTGGATTCTGGAATGATCTTCGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGYLGLAGQQGM*DSAGFWNDLRG Trigger: GCCCCGAAGATCATTCCAGAATCCAGCTGAATCTCACATTCCCTGTTGGCCAGCGAGGCCCAGATAGCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | CACAGGGCCCTTGAGTGTGCCAGGGCCATAGGACAATaGTCCCAACCTTCCCTCAGAGGTTCTCATGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HRALECARAIGQ*SQPSLRGSHEV Trigger: GACCTCATGAGAACCTCTGAGGGAAGGTTGGGAGCATTGTCCTATGGCCCTGGCACACTCAAGGGCCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | GAGAGGGTCGCCTTGGAAATTCCTTGTAGCTCCAGGTaGGCACCAGGCTCACCAATGCTGGCTTTCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ERVALEIPCSSR*APGSPMLAFWA Trigger: TGCCCAGAAAGCCAGCATTGGTGAGCCTGGTGCGCACCTGGAGCTACAAGGAATTTCCAAGGCGACCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | ACTGAGTCCTGGGTTTGCAAAGCACATCGGGCTTCCTaGTCACGCTGTTTCCGAGCCATCTGTGAGCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TESWVCKAHRAS*SRCFRAICEQA Trigger: GGCCTGCTCACAGATGGCTCGGAAACAGCGTGACCAGGAAGCCCGATGTGCTTTGCAAACCCAGGACTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | TCGCCTGCCCCGCCCCTTATCTATAATAGATCCACAGTGGCTGCTGTCCAAATGTGGGAGGGTTGGGATTaGGTGGGGTTGCCGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPAPPLIYNRSTVAAVQMWEGWD*VGLPAL Trigger: AAGAGCCGGCAACCCCACCAAATCCCAACCCTCCCA...CATTTGGACAGCAGCCACTGTGGATCTATTATAGATAAGGGGCGGGGCAGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGGTCGAGCCTCAACAAAGGGCCCAAAGGGTGGGGGATGCTAGCAACAACCCTGCCTCTGCTCTCTaGTGCTACCATACCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KRVEPQQRAQRVGDASNNPASAL*CYHTWL Trigger: AAGCCAGGTATGGTAGCACAAGAGAGCAGAGGCAGG...GTTGTTGCTAGCATCCCCCACCCTTTGGGCCCTTTGTTGAGGCTCGACCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | CCAGGCTCACCAATGCTGGCTTTCTGGGCATGGTGGTaGACAACTTTAAGCCTGGTACTTGGGAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGSPMLAFWAWW*TTLSLVLGRQR Trigger: CCTCTGCCTCCCAAGTACCAGGCTTAAAGTTGTGCACCACCATGCCCAGAAAGCCAGCATTGGTGAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | TGCATAGGCCGCGTTCACCCCAAGGCGTTCGAACAATaGGGGCGTAGTCACATGTGCACATCATTCCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CIGRVHPKAFEQ*GRSHMCTSFLH Trigger: GTGCAGGAATGATGTGCACATGTGACTACGCCCCCATTGTTCGAACGCCTTGGGGTGAACGCGGCCTATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | GCACCAGGCTCACCAATGCTGGCTTTCTGGGCATGGTaGTGCACAACTTTAAGCCTGGTACTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: APGSPMLAFWAW*CTTLSLVLGRQ Trigger: CTGCCTCCCAAGTACCAGGCTTAAAGTTGTGCACCACCATGCCCAGAAAGCCAGCATTGGTGAGCCTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | TGCGCACCAGGCTCACCAATGCTGGCTTTCTGGGCATaGTGGTGCACAACTTTAAGCCTGGTACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CAPGSPMLAFWA*WCTTLSLVLGR Trigger: CCTCCCAAGTACCAGGCTTAAAGTTGTGCACCACCATGCCCAGAAAGCCAGCATTGGTGAGCCTGGTGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | TCGCCTGCCCCGCCCCTTATCTATAATAGATCCACAGTGGCTGCTGTCCAAATGGGGAAGACGAAGAGATaGCACACGGTGCTCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SPAPPLIYNRSTVAAVQMGKTKR*HTVLTH Trigger: GTGGGTGAGCACCGTGTGCAATCTCTTCGTCTTCCC...CATTTGGACAGCAGCCACTGTGGATCTATTATAGATAAGGGGCGGGGCAGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | TTGGTCCCGGGAATCAAACTCAGGTTTGGTGGCAAGTaGCTTTCTTCATTGAGCCATATCGCCTGCCCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVPGIKLRFGGK*LSSLSHIACPA Trigger: GGCGGGGCAGGCGATATGGCTCAATGAAGAAAGGCACTTGCCACCAAACCTGAGTTTGATTCCCGGGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | ATTTATTGGGGCCAAGGGGTGGGAAGCCACAGCCCATaGGTAGAGGTTAGAAGGAAACCTGTGGGAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: IYWGQGVGSHSP*VEVRRKPVGVV Trigger: GACCACTCCCACAGGTTTCCTTCTAACCTCTACGCATGGGCTGTGGCTTCCCACCCCTTGGCCCCAATAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | AAACAAGTGATTCCCATGAGGGTCCAGCCGGCTATCTaGGCCTCGCTGGCCAACAGGGAATGTGAGATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQVIPMRVQPAI*ASLANRECEIQ Trigger: CTGAATCTCACATTCCCTGTTGGCCAGCGAGGCCCAGATAGCCGGCTGGACCCTCATGGGAATCACTTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | CGTAGTCACATGTGCACATCATTCCTGCACTCGGGCTaGGGGCAGGAGAGTTTAAGGCCAGTCTCAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: RSHMCTSFLHSG*GQESLRPVSAT Trigger: AGTAGCTGAGACTGGCCTTAAACTCTCCTGCCCCCAGCCCGAGTGCAGGAATGATGTGCACATGTGACTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | AGGCAGCTGACAGTTATCACTAATTCCAGGGCGATCTaGCACCCTCTTCTCCTCTCTGCAGGCACCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RQLTVITNSRAI*HPLLLSAGTRQ Trigger: TTGCCTGGTGCCTGCAGAGAGGAGAAGAGGGTGTCAGATCGCCCTGGAATTAGTGATAACTGTCAGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | AAAACCCCGAACCATAGGGCCAGAGAGGCTGCTCAGTaGTTAGAGCACACCGGCTGTTCTTCCAAACAACCT | + |
|
Preference number: 3 (lower is better) Translates to: KTPNHRAREAAQ*LEHTGCSSKQP Trigger: AGGTTGTTTGGAAGAACAGCCGGTGTGCTCTAACCACTGAGCAGCCTCTCTGGCCCTATGGTTCGGGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | ACTCAGCACCTTCCTATCTATCTGGAGACTGAGTCCTaGGTTTGCAAAGCACATCGGGCTTCCTGGTCACGC | + |
|
Preference number: 3 (lower is better) Translates to: TQHLPIYLETES*VCKAHRASWSR Trigger: GCGTGACCAGGAAGCCCGATGTGCTTTGCAAACCCAGGACTCAGTCTCCAGATAGATAGGAAGGTGCTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | ACAGACCAAAGCAACAGGGCTTGTGAAGAAGGGAAGTaGTTCAGGCTGCCTACCAAGCACAAGATGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TDQSNRACEEGK*FRLPTKHKMQR Trigger: CCTCTGCATCTTGTGCTTGGTAGGCAGCCTGAAGCACTTCCCTTCTTCACAAGCCCTGTTGCTTTGGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | CAGCAATCCTCCTGCCTCTGCCTCCTGAATACTGGGTaGAGTTGCAGTCTTAGCTACAGTGGACTGTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: QQSSCLCLLNTG*SCSLSYSGLYR Trigger: CCTATACAGTCCACTGTAGCTAAGACTGCAACTCCACCCAGTATTCAGGAGGCAGAGGCAGGAGGATTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | GGTTCTCATGAGGTCCCTAGGAAAGACATGCCTTCCTaGTTGCTTATTCACAGCTCTGCTCCTAACCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSHEVPRKDMPS*LLIHSSAPNPL Trigger: CAGGGGGTTAGGAGCAGAGCTGTGAATAAGCAACCAGGAAGGCATGTCTTTCCTAGGGACCTCATGAGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGGTCGAGCCTCAACAAAGGGCCCAAAGGGTGGGGGATGCTAGCAACAACGAATCAAACTCAGGTTaGGTGGCAAGTGCCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KRVEPQQRAQRVGDASNNESNSG*VASAFL Trigger: AAGAAAGGCACTTGCCACCAAACCTGAGTTTGATTC...GTTGTTGCTAGCATCCCCCACCCTTTGGGCCCTTTGTTGAGGCTCGACCCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | GCCCAAAGGGTGGGGGATGCTAGCAACAACAGGAAGTaGGTCTGTGAAAGGTGTCTGTGTGCTATACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: AQRVGDASNNRK*VCERCLCAIPT Trigger: TGTTGGTATAGCACACAGACACCTTTCACAGACTCACTTCCTGTTGTTGCTAGCATCCCCCACCCTTTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | AGGCTGCCTCTTAGGCTCGTCCCTGGGTCACTTTTATaGATTAGAGGACCCTATCATGGGTCAAAAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLPLRLVPGSLL*IRGPYHGSKGQ Trigger: CTGGCCTTTTGACCCATGATAGGGTCCTCTAATTCATAAAAGTGACCCAGGGACGAGCCTAAGAGGCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | TCCTCCTGCCTCTGCCTCCTGAATACTGGGTGGAGTTaGAGTCTTAGCTACAGTGGACTGTATAGGAATCGA | + |
|
Preference number: 3 (lower is better) Translates to: SSCLCLLNTGWS*SLSYSGLYRNR Trigger: TCGATTCCTATACAGTCCACTGTAGCTAAGACTGCAACTCCACCCAGTATTCAGGAGGCAGAGGCAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | GCAACAGGGCTTGTGAAGAAGGGAAGTGCTTCAGGCTaGCTACCAAGCACAAGATGCAGAGGAGCTTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ATGLVKKGSASG*LPSTRCRGALL Trigger: TAACAAAGCTCCTCTGCATCTTGTGCTTGGTAGGCAGCCTGAAGCACTTCCCTTCTTCACAAGCCCTGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | CTCCTAAGGTCGACACACAGTGGGAAATACCAGGCGTaGCGTTTTTGCTCAGTTTATTGGGAGGGTTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLRSTHSGKYQA*RFCSVYWEGWD Trigger: ATCCCAACCCTCCCAATAAACTGAGCAAAAACGCCACGCCTGGTATTTCCCACTGTGTGTCGACCTTAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | CAGGATGGCTTTGAACTCAGCACCTTCCTATCTATCTaGAGACTGAGTCCTGGGTTTGCAAAGCACATCGGG | + |
|
Preference number: 3 (lower is better) Translates to: QDGFELSTFLSI*RLSPGFAKHIG Trigger: CCCGATGTGCTTTGCAAACCCAGGACTCAGTCTCCAGATAGATAGGAAGGTGCTGAGTTCAAAGCCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTTCTTCCAAACAACCTGGGTTTGACTTTTTCAGCATCCACAAGGCAGCTGGGTTTACACAGAGAGTaGCAGGACAGCCAGGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: AVLPNNLGLTFSASTRQLGLHRE*QDSQGY Trigger: ATAGCCCTGGCTGTCCTGCAACTCTCTGTGTAAACC...CAGCTGCCTTGTGGATGCTGAAAAAGTCAAACCCAGGTTGTTTGGAAGAACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | CCAACAGGGAATGTGAGATTCAGCTGGATTCTGGAATaGTCTTCGGGGCCTACCCGGTTCTTAGCATCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PTGNVRFSWILE*SSGPTRFLASN Trigger: GTTTGATGCTAAGAACCGGGTAGGCCCCGAAGATCATTCCAGAATCCAGCTGAATCTCACATTCCCTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | GCTTTAAACTCCGATGTGCCTGCCTCTGCTCTCTTGTaGTACCATACCTGGCTTTTGGTCTCGCTATGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALNSDVPASALL*YHTWLLVSLCN Trigger: GTTACATAGCGAGACCAAAAGCCAGGTATGGTAGCACAAGAGAGCAGAGGCAGGCACATCGGAGTTTAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | TCGCCTGCCCCGCCCCTTATCTATAATAGATCCACAGTGGCTGCTGTCCAAATGTTCTTCTTCTGTCTTTaGACATCACTAGCTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPAPPLIYNRSTVAAVQMFFFCL*TSLAGW Trigger: CCAACCAGCTAGTGATGTCAAAAGACAGAAGAAGAA...CATTTGGACAGCAGCCACTGTGGATCTATTATAGATAAGGGGCGGGGCAGGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGGTCGAGCCTCAACAAAGGGCCCAAAGGGTGGGGGATGCTAGCAACAACTTTGTTGCTATTGTTTaGAGACAAGGTCTCAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KRVEPQQRAQRVGDASNNFVAIV*RQGLSV Trigger: TACACTGAGACCTTGTCTCAAAACAATAGCAACAAA...GTTGTTGCTAGCATCCCCCACCCTTTGGGCCCTTTGTTGAGGCTCGACCCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | TCAAACTCAGGTTTGGTGGCAAGTGCCTTTCTTCATTaGGCCATATCGCCTGCCCCGCCCCTTATCTATAAT | + |
|
Preference number: 3 (lower is better) Translates to: SNSGLVASAFLH*AISPAPPLIYN Trigger: ATTATAGATAAGGGGCGGGGCAGGCGATATGGCTCAATGAAGAAAGGCACTTGCCACCAAACCTGAGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | AAGGGAATGAAATTCAAGAAAATGAGAGTCCCATACTaGCTGTCACCTCGAGAACAGAGGTCTCTCTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KGMKFKKMRVPY*LSPREQRSLSA Trigger: GGCCGAGAGAGACCTCTGTTCTCGAGGTGACAGGCAGTATGGGACTCTCATTTTCTTGAATTTCATTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | ACCTTTAATACCAGCAATCAGAGGCAGGTGGATCTCTaGAAGTTAGAGGGCAGCCTGGTTTACACAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TFNTSNQRQVDL*KLEGSLVYTES Trigger: ACTCTCTGTGTAAACCAGGCTGCCCTCTAACTTGCAGAGATCCACCTGCCTCTGATTGCTGGTATTAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | AAGGGAAGTGCTTCAGGCTGCCTACCAAGCACAAGATaGAGAGGAGCTTTGTTAAAGATTCTCGTGCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: KGSASGCLPSTR*RGALLKILVLT Trigger: AGTCAGCACGAGAATCTTTAACAAAGCTCCTCTGCATCTTGTGCTTGGTAGGCAGCCTGAAGCACTTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | TCAGCTTCCCAATTAATGTTTGCGCATGTGCGTGTGTaGACACACCCCACTATGTTCACACGGAATGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SASQLMFAHVRV*THPTMFTRNGF Trigger: AAAGCCATTCCGTGTGAACATAGTGGGGTGTGTGCACACACGCACATGCGCAAACATTAATTGGGAAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | GGGGCTATGATTACTTCCAAACAATGCCAGGCATGGTaGTGCAACACCTTTAATACCAGCAATCAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GAMITSKQCQAW*CNTFNTSNQRQ Trigger: CTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTGGCATTGTTTGGAAGTAATCATAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | CTGGGGGCTATGATTACTTCCAAACAATGCCAGGCATaGTGGTGCAACACCTTTAATACCAGCAATCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGAMITSKQCQA*WCNTFNTSNQR Trigger: CCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTGGCATTGTTTGGAAGTAATCATAGCCCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACCATGTTGGTCCCGGGAATCAAACTCAGGTTTGGTGGCAAGTGCCTTTCCAGGGGGTATATCCGTaGTTTAAAAACTGCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FHHVGPGNQTQVWWQVPFQGVYP*FKNCFP Trigger: GGGAAAGCAGTTTTTAAACAACGGATATACCCCCTG...GAAAGGCACTTGCCACCAAACCTGAGTTTGATTCCCGGGACCAACATGGTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | CTCTCTCGGCCACATCCTCAAAGACCCAAATCTGTGTaGCAGATACCTGTAACCAAAGACAGAACTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSRPHPQRPKSV*QIPVTKDRTSQ Trigger: CTGTGAAGTTCTGTCTTTGGTTACAGGTATCTGTCACACAGATTTGGGTCTTTGAGGATGTGGCCGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | GCTATGATTACTTCCAAACAATGCCAGGCATGGTGGTaGAACACCTTTAATACCAGCAATCAGAGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: AMITSKQCQAWW*NTFNTSNQRQV Trigger: CACCTGCCTCTGATTGCTGGTATTAAAGGTGTTGCACCACCATGCCTGGCATTGTTTGGAAGTAATCATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | GTTTTTGCTCAGTTTATTGGGAGGGTTGGGATTTGGTaGGGTTGCCGGCTCTTCTCTTCTTCTTCTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VFAQFIGRVGIW*GCRLFSSSSVF Trigger: AAAGACAGAAGAAGAAGAGAAGAGCCGGCAACCCCACCAAATCCCAACCCTCCCAATAAACTGAGCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | CGCCTGCCCCGCCCCTTATCTATAATAGATCCACAGTaGCTGCTGTCCAAATGTTTATCATGTTATTCGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLPRPLSIIDPQ*LLSKCLSCYSV Trigger: AACCGAATAACATGATAAACATTTGGACAGCAGCCACTGTGGATCTATTATAGATAAGGGGCGGGGCAGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR-3UTR CAA 90 bp | TTTCACCATGTTGGTCCCGGGAATCAAACTCAGGTTTGGTGGCAAGTGCCTTTCGTTTCACATCACAAGTaGTGGATTTCCAATGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FHHVGPGNQTQVWWQVPFVSHHK*WISNVC Trigger: ACAGACATTGGAAATCCACAACTTGTGATGTGAAAC...GAAAGGCACTTGCCACCAAACCTGAGTTTGATTCCCGGGACCAACATGGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | TCCTTTCTTCCTGGAAAGGCTAGGGTTAATCTACATTaGAGTCCAGAGAAGAGAAAGAGATCTCGGGACGTC | + |
|
Preference number: 3 (lower is better) Translates to: SFLPGKARVNLH*SPEKRKRSRDV Trigger: GACGTCCCGAGATCTCTTTCTCTTCTCTGGACTTCAATGTAGATTAACCCTAGCCTTTCCAGGAAGAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | AAGTCCAGAGAAGAGAAAGAGATCTCGGGACGTCTGTaGGTACCTTCATTCAGAAATACAATGGACAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KSREEKEISGRL*VPSFRNTMDKG Trigger: ACCCTTGTCCATTGTATTTCTGAATGAAGGTACCCACAGACGTCCCGAGATCTCTTTCTCTTCTCTGGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | GTACATTCTTCCACTAAGAATGAAGGTATCCAGGACTaGACTCTTGAGTGCTCTCTTAACATGCATAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: VHSSTKNEGIQD*TLECSLNMHRP Trigger: CGGCCTATGCATGTTAAGAGAGCACTCAAGAGTCCAGTCCTGGATACCTTCATTCTTAGTGGAAGAATGTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | AGGGAAGAGACCACTATACAAACACTGACTACAGGCTaGGACCGGGCTAATTTGGTAGAACGCTTATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: REETTIQTLTTG*DRANLVERLCK Trigger: TTTACATAAGCGTTCTACCAAATTAGCCCGGTCCCAGCCTGTAGTCAGTGTTTGTATAGTGGTCTCTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | ATTAGAGGACCCTATCATGGGTCAAAAGGCCAGCTGTaGGGACATTCTTTTCCACACTTATTGCCAGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IRGPYHGSKGQL*GHSFPHLLPVE Trigger: TTCTACTGGCAATAAGTGTGGAAAAGAATGTCCTCACAGCTGGCCTTTTGACCCATGATAGGGTCCTCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR TCA 72 bp | AACTCAAAAACATTACAGAATTATCACAGGTTGCTTTaGAAGCAGCTTTCATGCTGGGGGCAGAGCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NSKTLQNYHRLL*KQLSCWGQSSG Trigger: TCCTGAGCTCTGCCCCCAGCATGAAAGCTGCTTTCAAAGCAACCTGTGATAATTCTGTAATGTTTTTGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR GCA 72 bp | GGTCAAACTCAAAAACATTACAGAATTATCACAGGTTaGTTTGAAAGCAGCTTTCATGCTGGGGGCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GQTQKHYRIITG*FESSFHAGGRA Trigger: AGCTCTGCCCCCAGCATGAAAGCTGCTTTCAAAGCAACCTGTGATAATTCTGTAATGTTTTTGAGTTTGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | TTCACAGGTGAGGAGCCCAAAGCCCAAGTACATAAATaGTCAAACTCAAAAACATTACAGAATTATCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FTGEEPKAQVHK*SNSKTLQNYHR Trigger: CCTGTGATAATTCTGTAATGTTTTTGAGTTTGACCATTTATGTACTTGGGCTTTGGGCTCCTCACCTGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CCA 72 bp | AAACAACAAAATCGGAATGTTTCACATCACAAGTTGTaGATTTCCAATGTCTGTGGAGAGATTTCCCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: KQQNRNVSHHKL*ISNVCGEISPV Trigger: TACTGGGGAAATCTCTCCACAGACATTGGAAATCCACAACTTGTGATGTGAAACATTCCGATTTTGTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCCAGCTTCTCCTCCACACTGGGGCTGCAAAGGCCACCGGGGCTGCCCCTCCAGAGGCTCCAGGTaGCCCAGGTCACCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GVPASPPHWGCKGHRGCPSRGSR*PRSPSL Trigger: CAGTGATGGTGACCTGGGCCACCTGGAGCCTCTGGA...GGGGCAGCCCCGGTGGCCTTTGCAGCCCCAGTGTGGAGGAGAAGCTGGAACACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
||
| CDS-3UTR CCA 90 bp | AGATGGCCACCACGACGCAGAGCGGTAGCACTGCGTGCTCTGGCTCGCCCTCGTACCGCTCGGTCAGCCTaGACAGTAACTTCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RWPPRRRAVALRALARPRTARSA*TVTSEP Trigger: CGGCTCAGAAGTTACTGTCCAGGCTGACCGAGCGGT...ACGAGGGCGAGCCAGAGCACGCAGTGCTACCGCTCTGCGTCGTGGTGGCCATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
||
| CDS-3UTR GCA 90 bp | ATTTATTGGGGCCAAGGGGTGGGAAGCCACAGCCCATGCGTAGAGGTTAGAAGGCCTCCACACTGGGGCTaGAAAGGCCACCGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IYWGQGVGSHSPCVEVRRPPHWG*KGHRGC Trigger: GCAGCCCCGGTGGCCTTTGCAGCCCCAGTGTGGAGG...CCTTCTAACCTCTACGCATGGGCTGTGGCTTCCCACCCCTTGGCCCCAATAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR CCA 90 bp | CCAGTAGCCCATGGGCCCCGTCATGAAGTAGATGGCCACCACGACGCAGAGCGGTCTTCTGCCCTCTTCTaGCTTCCAGAGGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVAHGPRHEVDGHHDAERSSALF*LPEAPG Trigger: ACCTGGAGCCTCTGGAAGCCAGAAGAGGGCAGAAGA...CCGCTCTGCGTCGTGGTGGCCATCTACTTCATGACGGGGCCCATGGGCTACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGCGGATGTTAAGCAACCTCACCTGGTTCTCCAGGTGTTCCAGCTTCTCCCTCGTCGCGCGCCGGTaGCTGTTCTTGTCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRMLSNLTWFSRCSSFSLVARR*LFLSAA Trigger: GGCTGCGGACAAGAACAGCCACCGGCGCGCGACGAG...GGAGAAGCTGGAACACCTGGAGAACCAGGTGAGGTTGCTTAACATCCGCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
||
| CDS-3UTR GCA 90 bp | ATGACACGCACGAGCCAGAAGAAGCGGCCAAACACCAGGTGGAGGAGGCTGAAGCTCGGGAGCCTCTTCTaGCCTCTTCTGGCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MTRTSQKKRPNTRWRRLKLGSLF*PLLASR Trigger: TCTGGAAGCCAGAAGAGGGCAGAAGAGGCTCCCGAG...CTTCAGCCTCCTCCACCTGGTGTTTGGCCGCTTCTTCTGGCTCGTGCGTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGGCTTTAAACTCCGATGTGCCTGCCTCTGCTCTCTTGTGCTACCATACCCTCGTCGCGCGCCGGTaGCTGTTCTTGTCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLALNSDVPASALLCYHTLVARR*LFLSAA Trigger: GGCTGCGGACAAGAACAGCCACCGGCGCGCGACGAG...GGTATGGTAGCACAAGAGAGCAGAGGCAGGCACATCGGAGTTTAAAGCCAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR TCA 90 bp | TTGAGGCGGATGTTAAGCAACCTCACCTGGTTCTCCAGGTGTTCCAGCTTCTCCGGGGCTGTTGGACACTaGGGCTGGGCTGAAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRMLSNLTWFSRCSSFSGAVGH*GWAEVL Trigger: CAGTACTTCAGCCCAGCCTCAGTGTCCAACAGCCCC...GGAGAAGCTGGAACACCTGGAGAACCAGGTGAGGTTGCTTAACATCCGCCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGGAATGTGAGATTCAGCTGGATTCTGGAATGATCTTCGGGGCCTACCCGAGCGGTAGCACTGCGTaGTCTGGCTCGCCCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NRECEIQLDSGMIFGAYPSGSTA*SGSPSY Trigger: GTACGAGGGCGAGCCAGAGCACGCAGTGCTACCGCT...CGGGTAGGCCCCGAAGATCATTCCAGAATCCAGCTGAATCTCACATTCCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR CCA 90 bp | TTTCACCATGTTGGTCCCGGGAATCAAACTCAGGTTTGGTGGCAAGTGCCTTTCGCTTCTCCTCCACACTaGGGCTGCAAAGGCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: FHHVGPGNQTQVWWQVPFASPPH*GCKGHR Trigger: CCGGTGGCCTTTGCAGCCCCAGTGTGGAGGAGAAGC...GAAAGGCACTTGCCACCAAACCTGAGTTTGATTCCCGGGACCAACATGGTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGATTTGGTGGGGTTGCCGGCTCTTCTCTTCTTCTTCTGTCTTTTGACAGGGGCTGTTGGACACTaGGGCTGGGCTGAAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GWDLVGLPALLFFFCLLTGAVGH*GWAEVL Trigger: CAGTACTTCAGCCCAGCCTCAGTGTCCAACAGCCCC...TGTCAAAAGACAGAAGAAGAAGAGAAGAGCCGGCAACCCCACCAAATCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CAA 72 bp | GTGGGGTTGCCGGCTCTTCTCTTCTTCTTCTGTCTTTaGACATCACTAGCTGGTTGGACGGCTAGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLPALLFFFCL*TSLAGWTARQL Trigger: CAGCTGCCTAGCCGTCCAACCAGCTAGTGATGTCAAAAGACAGAAGAAGAAGAGAAGAGCCGGCAACCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR TCA 90 bp | GAATGTGAGATTCAGCTGGATTCTGGAATGATCTTCGGGGCCTACCCGGTTCTTACATGGAGAACAGGATaGCACGCACGAGCCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECEIQLDSGMIFGAYPVLTWRTG*HARARR Trigger: TCTTCTGGCTCGTGCGTGTCATCCTGTTCTCCATGT...AAGAACCGGGTAGGCCCCGAAGATCATTCCAGAATCCAGCTGAATCTCACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CAA 72 bp | CTGGCTTTAAACTCCGATGTGCCTGCCTCTGCTCTCTaGTGCTACCATACCTGGCTTTTGGTCTCGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LALNSDVPASAL*CYHTWLLVSLC Trigger: ACATAGCGAGACCAAAAGCCAGGTATGGTAGCACAAGAGAGCAGAGGCAGGCACATCGGAGTTTAAAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR TCA 90 bp | TCTTCTATGGTCCCGAGTCAATTAGAAGCAAAGGAAACAAGTGATTCCCATGAGCCATGGGCCCCGTCATaGAGTAGATGGCCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SSMVPSQLEAKETSDSHEPWAPS*SRWPPR Trigger: TCGTGGTGGCCATCTACTTCATGACGGGGCCCATGG...CTCATGGGAATCACTTGTTTCCTTTGCTTCTAATTGACTCGGGACCATAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS-3UTR CCA 90 bp | TCTTCTATGGTCCCGAGTCAATTAGAAGCAAAGGAAACAAGTGATTCCCATGAGACCGCTCGGTCAGCCTaGACAGTAACTTCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSMVPSQLEAKETSDSHETARSA*TVTSEP Trigger: CGGCTCAGAAGTTACTGTCCAGGCTGACCGAGCGGT...CTCATGGGAATCACTTGTTTCCTTTGCTTCTAATTGACTCGGGACCATAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CAA 72 bp | TGCTCAGTTTATTGGGAGGGTTGGGATTTGGTGGGGTaGCCGGCTCTTCTCTTCTTCTTCTGTCTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CSVYWEGWDLVG*PALLFFFCLLT Trigger: TGTCAAAAGACAGAAGAAGAAGAGAAGAGCCGGCAACCCCACCAAATCCCAACCCTCCCAATAAACTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CAA 72 bp | CTTCCACTAAGAATGAAGGTATCCAGGACTGGACTCTaGAGTGCTCTCTTAACATGCATAGGCCGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRMKVSRTGL*SALLTCIGRVH Trigger: GTGAACGCGGCCTATGCATGTTAAGAGAGCACTCAAGAGTCCAGTCCTGGATACCTTCATTCTTAGTGGAAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CAA 72 bp | CACGAAATAAAGGTCACATTCGGGAAGACGAAGAGATaGCACACGGTGCTCACCCACAAGCCAATTTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: HEIKVTFGKTKR*HTVLTHKPILT Trigger: GGTTAAAATTGGCTTGTGGGTGAGCACCGTGTGCAATCTCTTCGTCTTCCCGAATGTGACCTTTATTTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
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| 3UTR CAA 72 bp | TCAGGCTGCCTACCAAGCACAAGATGCAGAGGAGCTTaGTTAAAGATTCTCGTGCTGACTCTTGAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGCLPSTRCRGA*LKILVLTLEHV Trigger: AACATGTTCAAGAGTCAGCACGAGAATCTTTAACAAAGCTCCTCTGCATCTTGTGCTTGGTAGGCAGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| 3UTR CAA 72 bp | TCCAAATGTTTATCATGTTATTCGGTTAAGGAGGAGTaGTACACAGCCCTGAAGATAAGGCATGAAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKCLSCYSVKEE*YTALKIRHEIR Trigger: CCTTATTTCATGCCTTATCTTCAGGGCTGTGTACAACTCCTCCTTAACCGAATAACATGATAAACATTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS GCA 90 bp | GCACGTTGTCCTCTCCGAAGAGGCTGCTCACGCTCTGCGAGAAGCTaGTCGTCGCGCGCCGGTGGCTGTTCTTGTCCGCAGCCCCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARCPLRRGCSRSARS*SSRAGGCSCPQPRG Trigger: GCCGCGGGGCTGCGGACAAGAACAGCCACCGGCGCGCGACGAGCAGCTTCTCGCAGAGCGTGAGCAGCCTCTTCGGAGAGGACAACGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS GCA 90 bp | ACAGTAACTTCTGAGCCGCGCGCACGTTGTCCTCTCCGAAGAGGCTaGTCACGCTCTGCGAGAAGCTGCTCGTCGCGCGCCGGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVTSEPRARCPLRRG*SRSARSCSSRAGGC Trigger: ACAGCCACCGGCGCGCGACGAGCAGCTTCTCGCAGAGCGTGAGCAGCCTCTTCGGAGAGGACAACGTGCGCGCGGCTCAGAAGTTACTGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
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| CDS TCA 90 bp | TCCACTCCCTGCACGAACCGCTCGGTCAGCCTGGACAGTAACTTCTaGGCCGCGCGCACGTTGTCCTCTCCGAAGAGGCTGCTCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: STPCTNRSVSLDSNF*AARTLSSPKRLLTL Trigger: GAGCGTGAGCAGCCTCTTCGGAGAGGACAACGTGCGCGCGGCTCAGAAGTTACTGTCCAGGCTGACCGAGCGGTTCGTGCAGGGAGTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS CCA 90 bp | TCTCTAAGAACATGTCCACTCCCTGCACGAACCGCTCGGTCAGCCTaGACAGTAACTTCTGAGCCGCGCGCACGTTGTCCTCTCCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLRTCPLPARTARSA*TVTSEPRARCPLRR Trigger: TCTTCGGAGAGGACAACGTGCGCGCGGCTCAGAAGTTACTGTCCAGGCTGACCGAGCGGTTCGTGCAGGGAGTGGACATGTTCTTAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS GCA 90 bp | CTCTTCTGGCTTCCAGAGGCTCCAGGTGGCCCAGGTCACCATCACTaGAGGCTCTACCTCCATTGTCGTCAAGCCCAAGGACTTCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFWLPEAPGGPGHHH*RLYLHCRQAQGLLR Trigger: TCTTAGAAGTCCTTGGGCTTGACGACAATGGAGGTAGAGCCTGCAGTGATGGTGACCTGGGCCACCTGGAGCCTCTGGAAGCCAGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
||
| CDS-3UTR CAA 90 bp | GAATGTGAGATTCAGCTGGATTCTGGAATGATCTTCGGGGCCTACCCGGTTCTTTTCTCGAGCACCCTGTaGAGGCGGATGTTAAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ECEIQLDSGMIFGAYPVLFSSTL*RRMLSN Trigger: GTTGCTTAACATCCGCCTCAACAGGGTGCTCGAGAA...AAGAACCGGGTAGGCCCCGAAGATCATTCCAGAATCCAGCTGAATCTCACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049040.14 |
||
| CDS CCA 72 bp | CTCACGCTCTGCGAGAAGCTGCTCGTCGCGCGCCGGTaGCTGTTCTTGTCCGCAGCCCCGCGGCCCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTLCEKLLVARR*LFLSAAPRPRA Trigger: GGCTCGGGGCCGCGGGGCTGCGGACAAGAACAGCCACCGGCGCGCGACGAGCAGCTTCTCGCAGAGCGTGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS GCA 72 bp | TCTGAGCCGCGCGCACGTTGTCCTCTCCGAAGAGGCTaGTCACGCTCTGCGAGAAGCTGCTCGTCGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SEPRARCPLRRG*SRSARSCSSRA Trigger: GGCGCGCGACGAGCAGCTTCTCGCAGAGCGTGAGCAGCCTCTTCGGAGAGGACAACGTGCGCGCGGCTCAGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS GCA 72 bp | CGCACGTTGTCCTCTCCGAAGAGGCTGCTCACGCTCTaGGAGAAGCTGCTCGTCGCGCGCCGGTGGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RTLSSPKRLLTL*EKLLVARRWLF Trigger: GAACAGCCACCGGCGCGCGACGAGCAGCTTCTCGCAGAGCGTGAGCAGCCTCTTCGGAGAGGACAACGTGCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS TCA 72 bp | TGCACGAACCGCTCGGTCAGCCTGGACAGTAACTTCTaGGCCGCGCGCACGTTGTCCTCTCCGAAGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CTNRSVSLDSNF*AARTLSSPKRL Trigger: CAGCCTCTTCGGAGAGGACAACGTGCGCGCGGCTCAGAAGTTACTGTCCAGGCTGACCGAGCGGTTCGTGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS CCA 72 bp | ACATGTCCACTCCCTGCACGAACCGCTCGGTCAGCCTaGACAGTAACTTCTGAGCCGCGCGCACGTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TCPLPARTARSA*TVTSEPRARCP Trigger: AGGACAACGTGCGCGCGGCTCAGAAGTTACTGTCCAGGCTGACCGAGCGGTTCGTGCAGGGAGTGGACATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049040.14 ENSMUST00000198811.2 |
||
| CDS TCA 72 bp | GCTGGGCTGAAGTACTGTGACAGGTTGGACACTGTGTaGGGACTCTCGGGAGCCTCTTCTGCCCTCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGLKYCDRLDTV*GLSGASSALFW Trigger: CCAGAAGAGGGCAGAAGAGGCTCCCGAGAGTCCTCACACAGTGTCCAACCTGTCACAGTACTTCAGCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198811.2 |
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