Pregenerated sensors for BRF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011158Ensembl transcript IDs: ENSMUST00000011302.9
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | ACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGATAAAACAGATACACTaGGAGTCCAGCACCAGGACG | + |
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Preference number: 3 (lower is better) Translates to: TGRVSEIIPMSRGPRAHLIKQIH*ESSTRT Trigger: CGTCCTGGTGCTGGACTCCAAGTGTATCTGTTTTAT...CAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGGAGTCCCAGGGCGAGGGGTCTaGTGCCCCCATCAGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: EPWPQGPSDTHKTDTLGVPGRGV*CPHQGL Trigger: GAGACCCTGATGGGGGCAGCAGACCCCTCGCCCTGG...GACTCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGCCAACTCGATGTCCGTaGCGCCGCAGCCGCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EIIPMSRGPRAHLTPIKQPTRCP*RRSRGR Trigger: TCTGCCGCGGCTGCGGCGGCACGGACATCGAGTTGG...CTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | ATAAAACAGATACACTTGGAGTCCAGCACCAGGACGCTGCCTGGCCTTGAGTTCGGCCTCTCCCACGGCTaGCTTCTTCGCCGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IKQIHLESSTRTLPGLEFGLSHG*LLRRLG Trigger: GCCCAGCCGGCGAAGAAGGCAGCCGTGGGAGAGGCC...GAACTCAAGGCCAGGCAGCGTCCTGGTGCTGGACTCCAAGTGTATCTGTTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGTGGCTCCCCAGGTGGTaGATGTGGCGCCGCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: TGRVSEIIPMSRGPRAHLWLPRW*MWRRPF Trigger: GAATGGGCGGCGCCACATCCACCACCTGGGGAGCCA...CAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | CAGTGCTTGACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGAGCTGGCTCCCCAGGTaGTGGATGTGGCGCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QCLTGRVSEIIPMSRGPRSWLPR*WMWRRP Trigger: TGGGCGGCGCCACATCCACCACCTGGGGAGCCAGCT...CCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGTCAAGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | CATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACCCAGGTGGTGGATGTaGCGCCGCCCATTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HSYEPWPQGPSDTHKTDTPRWWM*RRPFCR Trigger: CCTGCAGAATGGGCGGCGCCACATCCACCACCTGGG...TGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ATAAAACAGATACACTTGGAGTCCAGCACCAGGACGCTGCCTGGCCTTGAGTTCCCTCCCCAGCTGTGCTaGCCAGGATTGGCTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: IKQIHLESSTRTLPGLEFPPQLC*PGLAPG Trigger: GCCGGGAGCCAATCCTGGCCAGCACAGCTGGGGAGG...GAACTCAAGGCCAGGCAGCGTCCTGGTGCTGGACTCCAAGTGTATCTGTTTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | GAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGGAGTCACAGCTTCTTGGTGCTaGCACGCTCTGGGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: EPWPQGPSDTHKTDTLGVTASWC*HALGAV Trigger: CACAGCCCCCAGAGCGTGCCAGCACCAAGAAGCTGT...GACTCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | CTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAGCCTTCTTCGCCGGCTaGGCAGACAGCAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LRNHSYEPWPQGPSDTHKAFFAG*ADSRGL Trigger: GAGGCCTCTGCTGTCTGCCCAGCCGGCGAAGAAGGC...TTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | ACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGCAGTGCTGGTTTAGCTaGAGCTGGCTCCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGRVSEIIPMSRGPRAHLQCWFS*SWLPRW Trigger: CCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTG...CAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | ACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGGTGACAGCTTCTTGGTaGTGGCACGCTCTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGRVSEIIPMSRGPRAHLVTASW*WHALGA Trigger: AGCCCCCAGAGCGTGCCAGCACCAAGAAGCTGTCAC...CAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGCTGTGAGTCGTCCCTaGGTGGGCTGCCTCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTAVSRP*VGCLHP Trigger: AGGGTGGAGGCAGCCCACCCAGGGACGACTCACAGC...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGTCCGTGACAGCTTCTTaGTGCTGGCACGCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TGRVSEIIPMSRGPRAHLSVTAS*CWHALG Trigger: CCCCAGAGCGTGCCAGCACCAAGAAGCTGTCACGGA...CAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATATGGCGCCGCCCATTCTaGAGGGTCTGTGCTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VSEIIPMSRGPRAHLTPIWRRPF*RVCALD Trigger: ATCAAGAGCACAGACCCTGCAGAATGGGCGGCGCCA...TATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAGGGCGCCGGCCCGTGTaGATCCAATCCCTTTTCATT | + |
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Preference number: 4 (lower is better) Translates to: VSEIIPMSRGPRAHLTPIGRRPV*IQSLFI Trigger: AATGAAAAGGGATTGGATGCACACGGGCCGGCGCCC...TATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATATGCAACCAAAAGTGCTaGTCCACAGAGGCCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEIIPMSRGPRAHLTPICNQKC*STEAGG Trigger: CCCTCCGGCCTCTGTGGAGCAGCACTTTTGGTTGCA...TATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | AGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCCAGGCAGCAATCACATaGGCCATTTTCCGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSEIIPMSRGPRAHLTPQAAIT*AIFRPR Trigger: CCGAGGACGGAAAATGGCCCATGTGATTGCTGCCTG...GGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR TCA 90 bp | ATAAAACAGATACACTTGGAGTCCAGCACCAGGACGCTGCCTGGCCTTGAGTTCGCACCTCGGACACGATaGTGTTGTCCTCGAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: IKQIHLESSTRTLPGLEFAPRTR*CCPRAP Trigger: CGGTGCTCGAGGACAACATCATCGTGTCCGAGGTGC...GAACTCAAGGCCAGGCAGCGTCCTGGTGCTGGACTCCAAGTGTATCTGTTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR TCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAACCGGAGCCATCCTTTaGCAAGTTGGCCAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTTGAIL*QVGQSP Trigger: GGGGCTCTGGCCAACTTGTCAAAGGATGGCTCCGGT...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | AGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCGCTTCTTTCTCCTTCTaGTCCCGCAGGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVSEIIPMSRGPRAHLTPASFSF*SRRYSA Trigger: TGCTGAGTACCTGCGGGAGCAGAAGGAGAAAGAAGC...GGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | CAGTGCTTGACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGCCTTGTTCATGTGGCTaGCAGCAGCCTCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QCLTGRVSEIIPMSRGPRPCSCG*QQPPAP Trigger: AGGAGCTGGAGGCTGCTGCCAGCCACATGAACAAGG...CCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGTCAAGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR TCA 90 bp | AGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCCCAAACTCCAGCAGATaGGCAAAGCGTGGAATGTAC | + |
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Preference number: 4 (lower is better) Translates to: RVSEIIPMSRGPRAHLTPPNSSR*AKRGMY Trigger: GTACATTCCACGCTTTGCTCATCTGCTGGAGTTTGG...GGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACACACTTGGGGAGGAGATaGACTCTCGGATGGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTHLGRR*TLGWSR Trigger: CCGACTCCATCCGAGAGTGCATCTCCTCCCCAAGTG...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATATTGGCTCCCGGCGTTTaGAAGACTTCTTGGGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VSEIIPMSRGPRAHLTPILAPGV*KTSWAC Trigger: ACAAGCCCAAGAAGTCTTGCAAACGCCGGGAGCCAA...TATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGTGTCCAGGCAGTGCTaGTTTAGCTGCAGCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTVSRQC*FSCSWL Trigger: GAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACAC...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | CTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAAAGTCCTTGTTCATGTaGCTGGCAGCAGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LRNHSYEPWPQGPSDTHKKSLFM*LAAASS Trigger: GCTGGAGGCTGCTGCCAGCCACATGAACAAGGACTT...TTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR TCA 90 bp | CCCTTGCTGGGCAAAAATATCCCTTCCATTGCTCAAAACATGATTCCCAATAGTACGCTCTGGGGGCTGTaGGTCGTCCCTGGGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PLLGKNIPSIAQNMIPNSTLWGL*VVPGWA Trigger: AGCCCACCCAGGGACGACTCACAGCCCCCAGAGCGT...ACTATTGGGAATCATGTTTTGAGCAATGGAAGGGATATTTTTGCCCAGCAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGGAGTCGTTCTCCGGAAGTCATaGATTCTGGCTGCAACCAAA | + |
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Preference number: 4 (lower is better) Translates to: EPWPQGPSDTHKTDTLGVVLRKS*ILAATK Trigger: TTTGGTTGCAGCCAGAATGCATGACTTCCGGAGAAC...GACTCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGTTCCAGCTGCTTCATaGGAAGCTTCCTCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTVPAAS*EASSGQ Trigger: CTGGCCAGAGGAAGCTTCGCATGAAGCAGCTGGAAC...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGTGGCTTGATTGGCTCTaGTCCCAAGGCAGGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: EIIPMSRGPRAHLTPIKQWLDWL*SQGRRT Trigger: AGTTCTCCTGCCTTGGGAGCAGAGCCAATCAAGCCA...CTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGGCGTCCTCCTCATCTaGATCCTCCTCAGGATGGTA | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTGVLLI*ILLRMV Trigger: TACCATCCTGAGGAGGATGCAGATGAGGAGGACGCC...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACACTGTTCTCCACGAACTaGACCTCGGACACGATGATG | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTLFSTN*TSDTMM Trigger: CATCATCGTGTCCGAGGTGCAGTTCGTGGAGAACAG...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | TATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGGAGTCATGCATTCTGGCTaGAACCAAAAGTGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YEPWPQGPSDTHKTDTLGVMHSG*NQKCCS Trigger: GGAGCAGCACTTTTGGTTGCAGCCAGAATGCATGAC...TCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | GAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGGAGTCCTCCTTCGCTATTCTTaGTTCTTTCTCCTTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: EPWPQGPSDTHKTDTLGVLLRYS*FFLLLL Trigger: GAGCAGAAGGAGAAAGAAGCAAGAATAGCGAAGGAG...GACTCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR TCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACACAGGGTCTGTGCTCTTaGTTCCTTTCCCAAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTQGLCS*FLSQVH Trigger: GTGAACTTGGGAAAGGAATCAAGAGCACAGACCCTG...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | ATCCCTTCCATTGCTCAAAACATGATTCCCAATAGTAAGTACAATGGTCCACAAGGGCGAGGGGTCTGCTaGCCCCATCAGGGTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IPSIAQNMIPNSKYNGPQGRGVC*PHQGLL Trigger: CAGGAGACCCTGATGGGGGCAGCAGACCCCTCGCCC...TTGTGGACCATTGTACTTACTATTGGGAATCATGTTTTGAGCAATGGAAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | TATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGGATGTGCTCCTTATAGATaGCAAGCTCCTTCTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: YEPWPQGPSDTHKTDTLGCAPYR*QAPSPS Trigger: CGAAGGAGAAGGAGCTTGGCATCTATAAGGAGCACA...TCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ATAAAACAGATACACTTGGAGTCCAGCACCAGGACGCTGCCTGGCCTTGAGTTCGCATGGGTCTATAGCTaGTGCGTTGATGCAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: IKQIHLESSTRTLPGLEFAWVYS*CVDAKL Trigger: GAGCTTTGCATCAACGCACCAGCTATAGACCCATGC...GAACTCAAGGCCAGGCAGCGTCCTGGTGCTGGACTCCAAGTGTATCTGTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGTGGAATGTACAAGCATaGGTCTATAGCTGGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: TGRVSEIIPMSRGPRAHLWNVQA*VYSWCV Trigger: AACGCACCAGCTATAGACCCATGCTTGTACATTCCA...CAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR TCA 90 bp | CAGTGCTTGACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGTCATCAATAGTGAGCTaGCTGGTTGGAGTGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QCLTGRVSEIIPMSRGPRSSIVS*LVGVSS Trigger: TGAAGACACTCCAACCAGTCAGCTCACTATTGATGA...CCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGTCAAGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | CATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGAAGAAATTGAATaGTGTGTCCAGGCAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: HSYEPWPQGPSDTHKTDTLEEIE*CVQAVL Trigger: CAGCACTGCCTGGACACAGCATTCAATTTCTTCAAG...TGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | AGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACATCCCTTTTCATTCTCTaGAGAAGCCTCAAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RNHSYEPWPQGPSDTHKTSLFIL*RSLKAV Trigger: GACAGCCTTGAGGCTTCTGCAGAGAATGAAAAGGGA...TGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | CTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAGCCTCAAGGCTGTCATaGATACTTCATGGTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRNHSYEPWPQGPSDTHKASRLS*ILHGSS Trigger: AGAAGAACCATGAAGTATCCATGACAGCCTTGAGGC...TTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ATCCCTTCCATTGCTCAAAACATGATTCCCAATAGTAAGTACAATGGTCCACAACCAGGCTGGCTGCTGTaGGCAGGGGACCAAGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: IPSIAQNMIPNSKYNGPQPGWLL*AGDQVG Trigger: CCCTACTTGGTCCCCTGCCCACAGCAGCCAGCCTGG...TTGTGGACCATTGTACTTACTATTGGGAATCATGTTTTGAGCAATGGAAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | CCCTTGCTGGGCAAAAATATCCCTTCCATTGCTCAAAACATGATTCCCAATAGTTCAACCTCTTCCCTGTaGTTGTCCCAGGATCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLGKNIPSIAQNMIPNSSTSSL*LSQDQH Trigger: GTGCTGATCCTGGGACAAGCACAGGGAAGAGGTTGA...ACTATTGGGAATCATGTTTTGAGCAATGGAAGGGATATTTTTGCCCAGCAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | ATAGTAAGTACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGTTTGCCACCCATCATCTaGAGAGCACTGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVSTMVHNVATGRELQISLPPII*RALTQG Trigger: GCCCTGCGTCAGTGCTCTGCAGATGATGGGTGGCAA...ACTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGTACTTACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | AATAGTAAGTACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGTGGTTTAGCTGCAGCTaGCTCCCCAGGTGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSKYNGPQCSHRKRASNKWFSCS*LPRWWM Trigger: CATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCA...CTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGTACTTACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | AATAGTAAGTACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGAGATGCACTCTCGGATaGAGTCGGAGATGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSKYNGPQCSHRKRASNKRCTLG*SRRCPG Trigger: GCCTGGGCATCTCCGACTCCATCCGAGAGTGCATCT...CTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGTACTTACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ATAGTAAGTACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGTATGCGAAGCTTCCTCTaGCCAGCTGTGTACGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVSTMVHNVATGRELQISMRSFL*PAVYEG Trigger: TCCCTCGTACACAGCTGGCCAGAGGAAGCTTCGCAT...ACTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGTACTTACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR GCA 90 bp | ATAGTAAGTACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGTTGGGTCTATAGCTGGTaGGTTGATGCAAAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVSTMVHNVATGRELQISWVYSW*VDAKLP Trigger: AGGGAGCTTTGCATCAACGCACCAGCTATAGACCCA...ACTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGTACTTACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CCA 90 bp | ATCCCTTCCATTGCTCAAAACATGATTCCCAATAGTAAGTACAATGGTCCACAACATCCTTTGACAAGTTaGCCAGAGCCCCTTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPSIAQNMIPNSKYNGPQHPLTS*PEPLLL Trigger: AAGCAAAAGGGGCTCTGGCCAACTTGTCAAAGGATG...TTGTGGACCATTGTACTTACTATTGGGAATCATGTTTTGAGCAATGGAAGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | CCTCCTAGGGTTGGGGTTTTCCCAGCACCGTCCAGCGACACGAACTaGCCGACCGCCGACGAGCCGCCGCCGCTGTTCTCCACGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPRVGVFPAPSSDTN*PTADEPPPLFSTNC Trigger: GCAGTTCGTGGAGAACAGCGGCGGCGGCTCGTCGGCGGTCGGCCAGTTCGTGTCGCTGGACGGTGCTGGGAAAACCCCAACCCTAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | AACTGGCCGACCGCCGACGAGCCGCCGCCGCTGTTCTCCACGAACTaGACCTCGGACACGATGATGTTGTCCTCGAGCACCGAGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NWPTADEPPPLFSTN*TSDTMMLSSSTEPQ Trigger: CTGCGGCTCGGTGCTCGAGGACAACATCATCGTGTCCGAGGTGCAGTTCGTGGAGAACAGCGGCGGCGGCTCGTCGGCGGTCGGCCAGTT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 90 bp | ACGAGCCGCCGCCGCTGTTCTCCACGAACTGCACCTCGGACACGATaGTGTTGTCCTCGAGCACCGAGCCGCAGCCCGTGCACACCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TSRRRCSPRTAPRTR*CCPRAPSRSPCTPH Trigger: ATGCGGTGTGCACGGGCTGCGGCTCGGTGCTCGAGGACAACATCATCGTGTCCGAGGTGCAGTTCGTGGAGAACAGCGGCGGCGGCTCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | AGATGCACTCTCGGATGGAGTCGGAGATGCCCAGGCTGGCTGCTGTaGGCAGGGGACCAAGTAGGGACTCCAGGGCGAGGGGTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCTLGWSRRCPGWLL*AGDQVGTPGRGVCC Trigger: GCAGCAGACCCCTCGCCCTGGAGTCCCTACTTGGTCCCCTGCCCACAGCAGCCAGCCTGGGCATCTCCGACTCCATCCGAGAGTGCATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | GCTGTGTCCAGGCAGTGCTGGTTTAGCTGCAGCTGGCTCCCCAGGTaGTGGATGTGGCGCCGCCCATTCTGCAGGGTCTGTGCTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVSRQCWFSCSWLPR*WMWRRPFCRVCALD Trigger: ATCAAGAGCACAGACCCTGCAGAATGGGCGGCGCCACATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | ACTGACGCAGGGCTCTCCATCCTCGTCCTCGGCGTCCTCCTCATCTaGATCCTCCTCAGGATGGTACGACACAGGGCCACTCTCTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: TDAGLSILVLGVLLI*ILLRMVRHRATLYQ Trigger: TTGGTAGAGAGTGGCCCTGTGTCGTACCATCCTGAGGAGGATGCAGATGAGGAGGACGCCGAGGACGAGGATGGAGAGCCCTGCGTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | CCAGCTCCTCATCCTCAGTGTCTTCCTCACAGCGTGGACTGGATGTaGCGTCCTCACCGGAGCCATCCTTTGACAAGTTGGCCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPHPQCLPHSVDWM*RPHRSHPLTSWPEP Trigger: GGGCTCTGGCCAACTTGTCAAAGGATGGCTCCGGTGAGGACGCCACATCCAGTCCACGCTGTGAGGAAGACACTGAGGATGAGGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | GAACTTAAGAGTAAGGCCTCTCCCACGGCTGCCTTCTTCGCCGGCTaGGCAGACAGCAGAGGCCTCAACCTCTTCCCTGTGCTTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ELKSKASPTAAFFAG*ADSRGLNLFPVLVP Trigger: TGGGACAAGCACAGGGAAGAGGTTGAGGCCTCTGCTGTCTGCCCAGCCGGCGAAGAAGGCAGCCGTGGGAGAGGCCTTACTCTTAAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | AAGAAATTGAATGCTGTGTCCAGGCAGTGCTGGTTTAGCTGCAGCTaGCTCCCCAGGTGGTGGATGTGGCGCCGCCCATTCTGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KKLNAVSRQCWFSCS*LPRWWMWRRPFCRV Trigger: GACCCTGCAGAATGGGCGGCGCCACATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACACAGCATTCAATTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | CCATCCTCGTCCTCGGCGTCCTCCTCATCTGCATCCTCCTCAGGATaGTACGACACAGGGCCACTCTCTACCAAGACTGCTGATGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSSSASSSSASSSG*YDTGPLSTKTADGL Trigger: CAAGCCATCAGCAGTCTTGGTAGAGAGTGGCCCTGTGTCGTACCATCCTGAGGAGGATGCAGATGAGGAGGACGCCGAGGACGAGGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | ATCTTGAAGAAATTGAATGCTGTGTCCAGGCAGTGCTGGTTTAGCTaGAGCTGGCTCCCCAGGTGGTGGATGTGGCGCCGCCCATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILKKLNAVSRQCWFS*SWLPRWWMWRRPFC Trigger: GCAGAATGGGCGGCGCCACATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACACAGCATTCAATTTCTTCAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | CCGGAGGGGCGCCGGCCCGTGTGCATCCAATCCCTTTTCATTCTCTaGAGAAGCCTCAAGGCTGTCATGGATACTTCATGGTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PEGRRPVCIQSLFIL*RSLKAVMDTSWFFS Trigger: GGAGAAGAACCATGAAGTATCCATGACAGCCTTGAGGCTTCTGCAGAGAATGAAAAGGGATTGGATGCACACGGGCCGGCGCCCCTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | CTTACAGCCATCTTGAAGAAATTGAATGCTGTGTCCAGGCAGTGCTaGTTTAGCTGCAGCTGGCTCCCCAGGTGGTGGATGTGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LTAILKKLNAVSRQC*FSCSWLPRWWMWRR Trigger: GCGGCGCCACATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACACAGCATTCAATTTCTTCAAGATGGCTGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | AGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATTGGCTCCCGGCGTTaGCAAGACTTCTTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVSEIIPMSRGPRAHLTPIGSRR*QDFLGL Trigger: CAAGCCCAAGAAGTCTTGCAAACGCCGGGAGCCAAT...GGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 90 bp | CCATTCTGCAGGGTCTGTGCTCTTGATTCCTTTCCCAAGTTCACGTaGAAGCCACCTCCTAGGGTTGGGGTTTTCCCAGCACCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFCRVCALDSFPKFT*KPPPRVGVFPAPSS Trigger: GCTGGACGGTGCTGGGAAAACCCCAACCCTAGGAGGTGGCTTTCACGTGAACTTGGGAAAGGAATCAAGAGCACAGACCCTGCAGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | TTGCTTACAGCCATCTTGAAGAAATTGAATGCTGTGTCCAGGCAGTaGTGGTTTAGCTGCAGCTGGCTCCCCAGGTGGTGGATGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LLTAILKKLNAVSRQ*WFSCSWLPRWWMWR Trigger: GCGCCACATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACACAGCATTCAATTTCTTCAAGATGGCTGTAAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | TTCCAGCATCTTCTCAATAGCCTCCCCAGCTGTGCTGGCCAGGATTaGCTCCCGGCGTTTGCAAGACTTCTTGGGCTTGTGCTCCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: FQHLLNSLPSCAGQD*LPAFARLLGLVLLI Trigger: TATAAGGAGCACAAGCCCAAGAAGTCTTGCAAACGCCGGGAGCCAATCCTGGCCAGCACAGCTGGGGAGGCTATTGAGAAGATGCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | CAGATGAGCAAAGCGTGGAATGTACAAGCATGGGTCTATAGCTGGTaGGTTGATGCAAAGCTCCCTCGCCAAGAGCAGGAACGTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QMSKAWNVQAWVYSW*VDAKLPRQEQERLP Trigger: GGGAAGACGTTCCTGCTCTTGGCGAGGGAGCTTTGCATCAACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTTGCTCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | CTCCCCAAACTCCAGCAGATGAGCAAAGCGTGGAATGTACAAGCATaGGTCTATAGCTGGTGCGTTGATGCAAAGCTCCCTCGCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPKLQQMSKAWNVQA*VYSWCVDAKLPRQE Trigger: CTCTTGGCGAGGGAGCTTTGCATCAACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTTGCTCATCTGCTGGAGTTTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | ACTTTGACCACACTGATGACTTCTTTGACCGTTCTCCGGAAGTCATaGATTCTGGCTGCAACCAAAAGTGCTGCTCCACAGAGGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLTTLMTSLTVLRKS*ILAATKSAAPQRPE Trigger: CTCCGGCCTCTGTGGAGCAGCACTTTTGGTTGCAGCCAGAATGCATGACTTCCGGAGAACGGTCAAAGAAGTCATCAGTGTGGTCAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | CAGCAGATGAGCAAAGCGTGGAATGTACAAGCATGGGTCTATAGCTaGTGCGTTGATGCAAAGCTCCCTCGCCAAGAGCAGGAACGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QQMSKAWNVQAWVYS*CVDAKLPRQEQERL Trigger: AAGACGTTCCTGCTCTTGGCGAGGGAGCTTTGCATCAACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTTGCTCATCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | TATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGATACACTTGGAGCAGGGTCTGTGCTCTaGATTCCTTTCCCAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YEPWPQGPSDTHKTDTLGAGSVL*IPFPSS Trigger: TGAACTTGGGAAAGGAATCAAGAGCACAGACCCTGC...TCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | CAGTGCTTGACTGGTAGAGTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGTGGCCAGAGCCCCTTTaGCTTTTGGTCGACTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QCLTGRVSEIIPMSRGPRWPEPL*LLVDCF Trigger: AAAACAGTCGACCAAAAGCAAAAGGGGCTCTGGCCA...CCTGGGGCCACGGCTCATAGGAATGATTTCTGAGACTCTACCAGTCAAGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | GTCTCAGAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAGTGGACTCACATACTTaGACCACACTGATGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSEIIPMSRGPRAHLTPIVDSHT*TTLMTS Trigger: AGAAGTCATCAGTGTGGTCAAAGTATGTGAGTCCAC...TATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTCTGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 90 bp | AGGCAGGCAGCAATCACATGGGCCATTTTCCGTCCTCGGGTAAGATaGTTGCTTACAGCCATCTTGAAGAAATTGAATGCTGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQAAITWAIFRPRVR*LLTAILKKLNAVSR Trigger: CCTGGACACAGCATTCAATTTCTTCAAGATGGCTGTAAGCAAGCATCTTACCCGAGGACGGAAAATGGCCCATGTGATTGCTGCCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | GAAATCATTCCTATGAGCCGTGGCCCCAGGGCCCATCTGACACCCATAAAACAGTCTCCTTCGCTATTCTaGCTTCTTTCTCCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EIIPMSRGPRAHLTPIKQSPSLF*LLSPSA Trigger: AGCAGAAGGAGAAAGAAGCAAGAATAGCGAAGGAGA...CTGTTTTATGGGTGTCAGATGGGCCCTGGGGCCACGGCTCATAGGAATGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | ACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGTGGGGCAGTGCCTCGGGTAAGATGCTaGCTTACAGCCATCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TMVHNVATGRELQISGAVPRVRC*LTAILK Trigger: CTTCAAGATGGCTGTAAGCAAGCATCTTACCCGAGG...CACTGCCCCACTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | ATCCCTTCCATTGCTCAAAACATGATTCCCAATAGTAAGTACAATGGTCCACAACTCCGTGACAGCTTCTaGGTGCTGGCACGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPSIAQNMIPNSKYNGPQLRDSF*VLARSG Trigger: CCCAGAGCGTGCCAGCACCAAGAAGCTGTCACGGAG...TTGTGGACCATTGTACTTACTATTGGGAATCATGTTTTGAGCAATGGAAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 90 bp | CTCAGCATTCTCCCGCATCCACAACTCAGCTTTTACTCGGGCTTCTaGCTCATTCAAGATGTATCTGTCAATCTCAAGGTCATCGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSILPHPQLSFYSGF*LIQDVSVNLKVIDA Trigger: GGCATCGATGACCTTGAGATTGACAGATACATCTTGAATGAGTCAGAAGCCCGAGTAAAAGCTGAGTTGTGGATGCGGGAGAATGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 90 bp | TACTTCATGGTTCTTCTCCCCAAACTCCAGCAGATGAGCAAAGCGTaGAATGTACAAGCATGGGTCTATAGCTGGTGCGTTGATGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YFMVLLPKLQQMSKA*NVQAWVYSWCVDAK Trigger: CTTTGCATCAACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTTGCTCATCTGCTGGAGTTTGGGGAGAAGAACCATGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | ATCCCTTCCATTGCTCAAAACATGATTCCCAATAGTAAGTACAATGGTCCACAATCGGACACGATGATGTaGTCCTCGAGCACCGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IPSIAQNMIPNSKYNGPQSDTMM*SSSTEP Trigger: CGGCTCGGTGCTCGAGGACAACATCATCGTGTCCGA...TTGTGGACCATTGTACTTACTATTGGGAATCATGTTTTGAGCAATGGAAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | ACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGTGGGGCAGTGTTGCTTACAGCCATCTaGAAGAAATTGAATGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TMVHNVATGRELQISGAVLLTAI*KKLNAV Trigger: CACAGCATTCAATTTCTTCAAGATGGCTGTAAGCAA...CACTGCCCCACTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 90 bp | CACTCTTCCTCCAAGTCAATCTTCATAAACTCATCAATAGTGAGCTaGCTGGTTGGAGTGTCTTCAAATTCTGTGAGCCTCTTCCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSSKSIFINSSIVS*LVGVSSNSVSLFRS Trigger: ACTACGGAAGAGGCTCACAGAATTTGAAGACACTCCAACCAGTCAGCTCACTATTGATGAGTTTATGAAGATTGACTTGGAGGAAGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS-3UTR CAA 90 bp | AATAGTAAGTACAATGGTCCACAATGTAGCCACAGGAAGAGAGCTTCAAATAAGCTTCTTCTAGCTTTTTaGATAGGACCTGTTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSKYNGPQCSHRKRASNKLLLAF*IGPVPA Trigger: AGCTGGAACAGGTCCTATCAAAAAAGCTAGAAGAAG...CTTATTTGAAGCTCTCTTCCTGTGGCTACATTGTGGACCATTGTACTTACTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 90 bp | CCGCCGCCGCTGTTCTCCACGAACTGCACCTCGGACACGATGATGTaGTCCTCGAGCACCGAGCCGCAGCCCGTGCACACCGCATCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPPLFSTNCTSDTMM*SSSTEPQPVHTASP Trigger: CGGCGATGCGGTGTGCACGGGCTGCGGCTCGGTGCTCGAGGACAACATCATCGTGTCCGAGGTGCAGTTCGTGGAGAACAGCGGCGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | CGCCGCTGTTCTCCACGAACTGCACCTCGGACACGATaGTGTTGTCCTCGAGCACCGAGCCGCAGCCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRCSPRTAPRTR*CCPRAPSRSPC Trigger: GCACGGGCTGCGGCTCGGTGCTCGAGGACAACATCATCGTGTCCGAGGTGCAGTTCGTGGAGAACAGCGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | ACCGCCGACGAGCCGCCGCCGCTGTTCTCCACGAACTaGACCTCGGACACGATGATGTTGTCCTCGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TADEPPPLFSTN*TSDTMMLSSST Trigger: GGTGCTCGAGGACAACATCATCGTGTCCGAGGTGCAGTTCGTGGAGAACAGCGGCGGCGGCTCGTCGGCGGT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | GCTGCTCCACAGAGGCCGGAGGGGCGCCGGCCCGTGTaGATCCAATCCCTTTTCATTCTCTGCAGAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAPQRPEGRRPV*IQSLFILCRSL Trigger: GAGGCTTCTGCAGAGAATGAAAAGGGATTGGATGCACACGGGCCGGCGCCCCTCCGGCCTCTGTGGAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | CAGTGCTGGTTTAGCTGCAGCTGGCTCCCCAGGTGGTaGATGTGGCGCCGCCCATTCTGCAGGGTCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QCWFSCSWLPRW*MWRRPFCRVCA Trigger: AGCACAGACCCTGCAGAATGGGCGGCGCCACATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | AGGCAGTGCTGGTTTAGCTGCAGCTGGCTCCCCAGGTaGTGGATGTGGCGCCGCCCATTCTGCAGGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RQCWFSCSWLPR*WMWRRPFCRVC Trigger: ACAGACCCTGCAGAATGGGCGGCGCCACATCCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | AGTAAGGCCTCTCCCACGGCTGCCTTCTTCGCCGGCTaGGCAGACAGCAGAGGCCTCAACCTCTTCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SKASPTAAFFAG*ADSRGLNLFPV Trigger: CACAGGGAAGAGGTTGAGGCCTCTGCTGTCTGCCCAGCCGGCGAAGAAGGCAGCCGTGGGAGAGGCCTTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | GGGCTCTCCATCCTCGTCCTCGGCGTCCTCCTCATCTaGATCCTCCTCAGGATGGTACGACACAGGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: GLSILVLGVLLI*ILLRMVRHRAT Trigger: AGTGGCCCTGTGTCGTACCATCCTGAGGAGGATGCAGATGAGGAGGACGCCGAGGACGAGGATGGAGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 72 bp | CTGTTCTCCACGAACTGCACCTCGGACACGATGATGTaGTCCTCGAGCACCGAGCCGCAGCCCGTGCACACC | + |
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Preference number: 6 (lower is better) Translates to: LFSTNCTSDTMM*SSSTEPQPVHT Trigger: GGTGTGCACGGGCTGCGGCTCGGTGCTCGAGGACAACATCATCGTGTCCGAGGTGCAGTTCGTGGAGAACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | TGGCTCCCCAGGTGGTGGATGTGGCGCCGCCCATTCTaGAGGGTCTGTGCTCTTGATTCCTTTCCCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: WLPRWWMWRRPF*RVCALDSFPKF Trigger: GAACTTGGGAAAGGAATCAAGAGCACAGACCCTGCAGAATGGGCGGCGCCACATCCACCACCTGGGGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | AGGACCTGTTCCAGCTGCTTCATGCGAAGCTTCCTCTaGCCAGCTGTGTACGAGGGAGGGTCGCACTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RTCSSCFMRSFL*PAVYEGGSHSS Trigger: GGAAGAGTGCGACCCTCCCTCGTACACAGCTGGCCAGAGGAAGCTTCGCATGAAGCAGCTGGAACAGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | CCCCAGCTGTGCTGGCCAGGATTGGCTCCCGGCGTTTaGAAGACTTCTTGGGCTTGTGCTCCTTATAGATGC | + |
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Preference number: 6 (lower is better) Translates to: PQLCWPGLAPGV*KTSWACAPYRC Trigger: GCATCTATAAGGAGCACAAGCCCAAGAAGTCTTGCAAACGCCGGGAGCCAATCCTGGCCAGCACAGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | GCTCCTCATCCTCAGTGTCTTCCTCACAGCGTGGACTaGATGTGGCGTCCTCACCGGAGCCATCCTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: APHPQCLPHSVD*MWRPHRSHPLT Trigger: TGTCAAAGGATGGCTCCGGTGAGGACGCCACATCCAGTCCACGCTGTGAGGAAGACACTGAGGATGAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | TCCTCGGCGTCCTCCTCATCTGCATCCTCCTCAGGATaGTACGACACAGGGCCACTCTCTACCAAGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSASSSSASSSG*YDTGPLSTKTA Trigger: AGCAGTCTTGGTAGAGAGTGGCCCTGTGTCGTACCATCCTGAGGAGGATGCAGATGAGGAGGACGCCGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | GATGTGGCGCCGCCCATTCTGCAGGGTCTGTGCTCTTaGTTCCTTTCCCAAGTTCACGTGAAAGCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: DVAPPILQGLCS*FLSQVHVKATS Trigger: GGAGGTGGCTTTCACGTGAACTTGGGAAAGGAATCAAGAGCACAGACCCTGCAGAATGGGCGGCGCCACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 72 bp | CCTTTCCCAAGTTCACGTGAAAGCCACCTCCTAGGGTaGGGGTTTTCCCAGCACCGTCCAGCGACACGAACT | + |
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Preference number: 6 (lower is better) Translates to: PFPSSRESHLLG*GFSQHRPATRT Trigger: AGTTCGTGTCGCTGGACGGTGCTGGGAAAACCCCAACCCTAGGAGGTGGCTTTCACGTGAACTTGGGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | ATGGTACGACACAGGGCCACTCTCTACCAAGACTGCTaGTGGCTTGATTGGCTCTGCTCCCAAGGCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: MVRHRATLYQDC*WLDWLCSQGRR Trigger: TCTCCTGCCTTGGGAGCAGAGCCAATCAAGCCATCAGCAGTCTTGGTAGAGAGTGGCCCTGTGTCGTACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | GCCATCTTGAAGAAATTGAATGCTGTGTCCAGGCAGTaGTGGTTTAGCTGCAGCTGGCTCCCCAGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AILKKLNAVSRQ*WFSCSWLPRWW Trigger: CCACCACCTGGGGAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACACAGCATTCAATTTCTTCAAGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | TTCTTTGACCGTTCTCCGGAAGTCATGCATTCTGGCTaGAACCAAAAGTGCTGCTCCACAGAGGCCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: FFDRSPEVMHSG*NQKCCSTEAGG Trigger: CCCTCCGGCCTCTGTGGAGCAGCACTTTTGGTTGCAGCCAGAATGCATGACTTCCGGAGAACGGTCAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | ATCAGCACTATTTCTGGTAGTTGCTCTTTTCCTCCGTaGCAGCTTCTTGGTGCTGGCACGCTCTGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ISTISGSCSFPP*QLLGAGTLWGL Trigger: CAGCCCCCAGAGCGTGCCAGCACCAAGAAGCTGTCACGGAGGAAAAGAGCAACTACCAGAAATAGTGCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | CGCCGGCCCGTGTGCATCCAATCCCTTTTCATTCTCTaGAGAAGCCTCAAGGCTGTCATGGATACTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: RRPVCIQSLFIL*RSLKAVMDTSW Trigger: CCATGAAGTATCCATGACAGCCTTGAGGCTTCTGCAGAGAATGAAAAGGGATTGGATGCACACGGGCCGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | AGGGTCTGTGCTCTTGATTCCTTTCCCAAGTTCACGTaGAAGCCACCTCCTAGGGTTGGGGTTTTCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RVCALDSFPKFT*KPPPRVGVFPA Trigger: TGCTGGGAAAACCCCAACCCTAGGAGGTGGCTTTCACGTGAACTTGGGAAAGGAATCAAGAGCACAGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | AGCAAAGCGTGGAATGTACAAGCATGGGTCTATAGCTaGTGCGTTGATGCAAAGCTCCCTCGCCAAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SKAWNVQAWVYS*CVDAKLPRQEQ Trigger: CTGCTCTTGGCGAGGGAGCTTTGCATCAACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 90 bp | TTCCGTCCTCGGGTAAGATGCTTGCTTACAGCCATCTTGAAGAAATaGAATGCTGTGTCCAGGCAGTGCTGGTTTAGCTGCAGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FRPRVRCLLTAILKK*NAVSRQCWFSCSWL Trigger: GAGCCAGCTGCAGCTAAACCAGCACTGCCTGGACACAGCATTCAATTTCTTCAAGATGGCTGTAAGCAAGCATCTTACCCGAGGACGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | AAAGCGTGGAATGTACAAGCATGGGTCTATAGCTGGTaGGTTGATGCAAAGCTCCCTCGCCAAGAGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: KAWNVQAWVYSW*VDAKLPRQEQE Trigger: TTCCTGCTCTTGGCGAGGGAGCTTTGCATCAACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | CTCCAGCAGATGAGCAAAGCGTGGAATGTACAAGCATaGGTCTATAGCTGGTGCGTTGATGCAAAGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LQQMSKAWNVQA*VYSWCVDAKLP Trigger: AGGGAGCTTTGCATCAACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTTGCTCATCTGCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 90 bp | TGGGCCATTTTCCGTCCTCGGGTAAGATGCTTGCTTACAGCCATCTaGAAGAAATTGAATGCTGTGTCCAGGCAGTGCTGGTTTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WAIFRPRVRCLLTAI*KKLNAVSRQCWFSC Trigger: GCAGCTAAACCAGCACTGCCTGGACACAGCATTCAATTTCTTCAAGATGGCTGTAAGCAAGCATCTTACCCGAGGACGGAAAATGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 90 bp | CAGGCAGCAATCACATGGGCCATTTTCCGTCCTCGGGTAAGATGCTaGCTTACAGCCATCTTGAAGAAATTGAATGCTGTGTCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QAAITWAIFRPRVRC*LTAILKKLNAVSRQ Trigger: CTGCCTGGACACAGCATTCAATTTCTTCAAGATGGCTGTAAGCAAGCATCTTACCCGAGGACGGAAAATGGCCCATGTGATTGCTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | ACACTGATGACTTCTTTGACCGTTCTCCGGAAGTCATaGATTCTGGCTGCAACCAAAAGTGCTGCTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TLMTSLTVLRKS*ILAATKSAAPQ Trigger: CTGTGGAGCAGCACTTTTGGTTGCAGCCAGAATGCATGACTTCCGGAGAACGGTCAAAGAAGTCATCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CCA 72 bp | GTTCTTCTCCCCAAACTCCAGCAGATGAGCAAAGCGTaGAATGTACAAGCATGGGTCTATAGCTGGTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: VLLPKLQQMSKA*NVQAWVYSWCV Trigger: AACGCACCAGCTATAGACCCATGCTTGTACATTCCACGCTTTGCTCATCTGCTGGAGTTTGGGGAGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 72 bp | TTCCGTCCTCGGGTAAGATGCTTGCTTACAGCCATCTaGAAGAAATTGAATGCTGTGTCCAGGCAGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FRPRVRCLLTAI*KKLNAVSRQCW Trigger: CCAGCACTGCCTGGACACAGCATTCAATTTCTTCAAGATGGCTGTAAGCAAGCATCTTACCCGAGGACGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 72 bp | GTGGACTCACATACTTTGACCACACTGATGACTTCTTaGACCGTTCTCCGGAAGTCATGCATTCTGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VDSHTLTTLMTS*TVLRKSCILAA Trigger: TGCAGCCAGAATGCATGACTTCCGGAGAACGGTCAAAGAAGTCATCAGTGTGGTCAAAGTATGTGAGTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 90 bp | TTCCGTAGTGTGGACTCACATACTTTGACCACACTGATGACTTCTTaGACCGTTCTCCGGAAGTCATGCATTCTGGCTGCAACCAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: FRSVDSHTLTTLMTS*TVLRKSCILAATKS Trigger: ACTTTTGGTTGCAGCCAGAATGCATGACTTCCGGAGAACGGTCAAAGAAGTCATCAGTGTGGTCAAAGTATGTGAGTCCACACTACGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS CAA 90 bp | TCTTCAAATTCTGTGAGCCTCTTCCGTAGTGTGGACTCACATACTTaGACCACACTGATGACTTCTTTGACCGTTCTCCGGAAGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: SSNSVSLFRSVDSHT*TTLMTSLTVLRKSC Trigger: GCATGACTTCCGGAGAACGGTCAAAGAAGTCATCAGTGTGGTCAAAGTATGTGAGTCCACACTACGGAAGAGGCTCACAGAATTTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | CTCCCGCATCCACAACTCAGCTTTTACTCGGGCTTCTaGCTCATTCAAGATGTATCTGTCAATCTCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LPHPQLSFYSGF*LIQDVSVNLKV Trigger: GACCTTGAGATTGACAGATACATCTTGAATGAGTCAGAAGCCCGAGTAAAAGCTGAGTTGTGGATGCGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | GATACTTCATGGTTCTTCTCCCCAAACTCCAGCAGATaGGCAAAGCGTGGAATGTACAAGCATGGGTCTATA | + |
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Preference number: 6 (lower is better) Translates to: DTSWFFSPNSSR*AKRGMYKHGSI Trigger: TATAGACCCATGCTTGTACATTCCACGCTTTGCTCATCTGCTGGAGTTTGGGGAGAAGAACCATGAAGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | GCAATCACATGGGCCATTTTCCGTCCTCGGGTAAGATaGTTGCTTACAGCCATCTTGAAGAAATTGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: AITWAIFRPRVR*LLTAILKKLNA Trigger: AGCATTCAATTTCTTCAAGATGGCTGTAAGCAAGCATCTTACCCGAGGACGGAAAATGGCCCATGTGATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS GCA 72 bp | GTTTGCAAGACTTCTTGGGCTTGTGCTCCTTATAGATaGCAAGCTCCTTCTCCTTCGCTATTCTTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VCKTSWACAPYR*QAPSPSLFLLL Trigger: AAGAAGCAAGAATAGCGAAGGAGAAGGAGCTTGGCATCTATAAGGAGCACAAGCCCAAGAAGTCTTGCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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| CDS TCA 72 bp | TCCAAGTCAATCTTCATAAACTCATCAATAGTGAGCTaGCTGGTTGGAGTGTCTTCAAATTCTGTGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKSIFINSSIVS*LVGVSSNSVSL Trigger: GAGGCTCACAGAATTTGAAGACACTCCAACCAGTCAGCTCACTATTGATGAGTTTATGAAGATTGACTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011302.9 |
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