Pregenerated sensors for BRDT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029279Ensembl transcript IDs: ENSMUST00000031215.15, ENSMUST00000112677.10
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTaGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GVHCPVWTAGVHCPV*TAGVHCPVWTAGVH Trigger: GTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR CCA 90 bp | GGTGTGCACTGCCCTGTCTGGACAGCAGGTGTTCACTGCCCTGTCTaGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GVHCPVWTAGVHCPV*TAGVHCPVWTAGVH Trigger: GTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACCTGCTGTCCAGACAGGGCAGTGCACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 90 bp | GGTGTGCACTGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTaGATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GVHCPVWTADVHCPV*IAGVHCPVWTAGVH Trigger: GTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCAGTGCACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 90 bp | CTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTaGACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTACA | + |
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Preference number: 1 (lower is better) Translates to: LSGQQVCTALSGQQV*TALSGQQVCTALST Trigger: TGTAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 90 bp | TGGACAGCAGGTGTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTaGCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: WTAGVHCPVWTAGVH*PVWTAGVHCPVWTA Trigger: TGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACCTGCTGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 90 bp | CTGTCTGGACAGCAGGTGTTCACTGCCCTGTCTGGACAGCAGGTGTaGACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LSGQQVFTALSGQQV*TALSGQQVCTALSG Trigger: TCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACCTGCTGTCCAGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 90 bp | TGGACAGCAGGTGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTaGCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGCATAGCA | + |
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Preference number: 1 (lower is better) Translates to: WTAGVHCPVYIAGVH*PVWTAGVHCPVCIA Trigger: TGCTATGCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACACCTGCTGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 90 bp | ATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTTCACTaGCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: ITAGVHCPVWTAGVH*PVWTAGVHCPVWTA Trigger: TGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 90 bp | CAGCCAGGCATGAAGACACACTTCTGGAGTCCAGTACTTGAGAGCTaGGGGCAGGAGAATCAGGAGATCAAGGCCAGCCTTGGCTACATG | + |
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Preference number: 1 (lower is better) Translates to: QPGMKTHFWSPVLES*GQENQEIKASLGYM Trigger: CATGTAGCCAAGGCTGGCCTTGATCTCCTGATTCTCCTGCCCTCAGCTCTCAAGTACTGGACTCCAGAAGTGTGTCTTCATGCCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 90 bp | AACAACTCAGCCAGGCATGAAGACACACTTCTGGAGTCCAGTACTTaGGAGCTGAGGGCAGGAGAATCAGGAGATCAAGGCCAGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: NNSARHEDTLLESST*ELRAGESGDQGQPW Trigger: CCAAGGCTGGCCTTGATCTCCTGATTCTCCTGCCCTCAGCTCTCAAGTACTGGACTCCAGAAGTGTGTCTTCATGCCTGGCTGAGTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 90 bp | GAGGGCAGGAGAATCAGGAGATCAAGGCCAGCCTTGGCTACATGTTaGGTTCACCAAAGCCAGCCTGAGTATATGAGACCCTGTCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: EGRRIRRSRPALATC*VHQSQPEYMRPCLK Trigger: TTTGAGACAGGGTCTCATATACTCAGGCTGGCTTTGGTGAACTCAACATGTAGCCAAGGCTGGCCTTGATCTCCTGATTCTCCTGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 90 bp | ATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATaGTGTGTAAGACTGAGGACCCTGGTTCAATCTCCACTAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: IMKQNCALREPGPRR*CVRLRTLVQSPLAC Trigger: ACAGGCTAGTGGAGATTGAACCAGGGTCCTCAGTCTTACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
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| 3UTR TCA 90 bp | CAGCCTTGGCTACATGTTGAGTTCACCAAAGCCAGCCTGAGTATATaGGACCCTGTCTCAAACAAGGACACAAACCAACTAACCAACAAA | + |
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Preference number: 1 (lower is better) Translates to: QPWLHVEFTKASLSI*DPVSNKDTNQLTNK Trigger: TTTGTTGGTTAGTTGGTTTGTGTCCTTGTTTGAGACAGGGTCTCATATACTCAGGCTGGCTTTGGTGAACTCAACATGTAGCCAAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 90 bp | TCTCTCTCTCTTTCTTGGTTCTTCTCAATCAAGGAGGTCTGGCTATaGCCAGAATCTGAAGATTGCTATGTGAACCAGGCTGGTCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: SLSLSWFFSIKEVWL*PESEDCYVNQAGLE Trigger: CTCAAGACCAGCCTGGTTCACATAGCAATCTTCAGATTCTGGTCATAGCCAGACCTCCTTGATTGAGAAGAACCAAGAAAGAGAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 90 bp | AGTATGGAATTTAAACATGGAACTAGCAGAGAATCTGACACACTGTaGCTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACA | + |
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Preference number: 1 (lower is better) Translates to: SMEFKHGTSRESDTL*LTWKPSILVRSSVT Trigger: TGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAAATTCCATACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 90 bp | TATTTAAAACGTCCCAACGGTCCTCTTCAGGTGTTAGTATTCTGGTaGTGTAATTTTCTTCACAATTTCCTGGACATTAGATCAATTTCT | + |
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Preference number: 1 (lower is better) Translates to: YLKRPNGPLQVLVFW*CNFLHNFLDIRSIS Trigger: AGAAATTGATCTAATGTCCAGGAAATTGTGAAGAAAATTACATCACCAGAATACTAACACCTGAAGAGGACCGTTGGGACGTTTTAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGGTGCACTGCCCTGTCTaGACAGCAGGTGTGCACTTC | + |
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Preference number: 2 (lower is better) Translates to: CALPCLHSRCALPCLDSRVHCPV*TAGVHF Trigger: GAAGTGCACACCTGCTGTCCAGACAGGGCAGTGCAC...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR TCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGCCAGTACTTGAGAGCTaGGGGCAGGAGAATCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: CALPCLHSRCALPCLDSRPVLES*GQENQE Trigger: CTCCTGATTCTCCTGCCCTCAGCTCTCAAGTACTGG...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTGCATAGCAGGTGTGCACCTGGAGTCCAGTACTTaGGAGCTGAGGGCAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CPVWTADVHCPVCIAGVHLESST*ELRAGE Trigger: TTCTCCTGCCCTCAGCTCTCAAGTACTGGACTCCAG...GTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTGCATAGCAGGTGTGCACGCCTTGGCTACATGTTaGGTTCACCAAAGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: CPVWTADVHCPVCIAGVHALATC*VHQSQP Trigger: AGGCTGGCTTTGGTGAACTCAACATGTAGCCAAGGC...GTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR TCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGCAACTCAGCCAGGCATaGAGACACACTTCTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: CALPCLHSRCALPCLDSRQLSQA*RHTSGV Trigger: GACTCCAGAAGTGTGTCTTCATGCCTGGCTGAGTTG...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGATGAAGACACACTTCTaGAGTCCAGTACTTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: CALPCLHSRCALPCLDSRMKTHF*SPVLES Trigger: GCTCTCAAGTACTGGACTCCAGAAGTGTGTCTTCAT...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGCACTTCCCTGTCTaGACACACACTGAGTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: PPNTGITAGVHCPVWTAGVHFPV*THTEFV Trigger: TACAAACTCAGTGTGTGTCCAGACAGGGAAGTGCAC...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR TCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAAGTTCTGTTACAATTCTaGCAGCAGACACATATCTCT | + |
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Preference number: 2 (lower is better) Translates to: LNMELAENLTHCDSHGNQVLLQF*QQTHIS Trigger: AGAGATATGTGTCTGCTGTCAGAATTGTAACAGAAC...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR-3UTR TCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAATCAGAACACAATCAGTaGTTGACATTCTGGTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: LNMELAENLTHCDSHGNQSEHNQ*LTFWCL Trigger: TAAACACCAGAATGTCAATCACTGATTGTGTTCTGA...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 72 bp | CAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTaGACTGCCCTGTCTGGACAGCAGGTGTGCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: QQVCTALSGQQV*TALSGQQVCTA Trigger: GGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 72 bp | GGTGTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTaGCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GVHCPVWTAGVH*PVWTAGVHCPV Trigger: GACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 72 bp | CAGCAGGTGTTCACTGCCCTGTCTGGACAGCAGGTGTaGACTGCCCTGTCTGGACAGCAGGTGTGCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: QQVFTALSGQQV*TALSGQQVCTA Trigger: GGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 72 bp | GGTGTGCACTGCCCTGTCTGGACAGCAGGTGTTCACTaGCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GVHCPVWTAGVH*PVWTAGVHCPV Trigger: GACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACCTGCTGTCCAGACAGGGCAGTGCACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 72 bp | GGTGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTaGCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GVHCPVYIAGVH*PVWTAGVHCPV Trigger: GACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR CCA 72 bp | TGCCCTGTCTGGACAGCAGGTGTTCACTGCCCTGTCTaGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: CPVWTAGVHCPV*TAGVHCPVWTA Trigger: TGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAACACCTGCTGTCCAGACAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 72 bp | GATGTGCACTGCCCTGTCTGCATAGCAGGTGTGCACTaGCCTGTCTGGACAGCAGGTGTGCACTTCCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: DVHCPVCIAGVH*PVWTAGVHFPV Trigger: GACAGGGAAGTGCACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGCAGACAGGGCAGTGCACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR GCA 72 bp | TGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTaGATAGCAGGTGTGCACTGCCCTGTCTGGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: CPVWTADVHCPV*IAGVHCPVWTA Trigger: TGCTGTCCAGACAGGGCAGTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR CCA 72 bp | TGCCCTGTCTGCATAGCAGGTGTGCACTGCCCTGTCTaGACAGCAGATGTGCACTGCCCTGTCTGCATAGCA | + |
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Preference number: 3 (lower is better) Translates to: CPVCIAGVHCPV*TADVHCPVCIA Trigger: TGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGCAGACAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR CCA 72 bp | CTGAGGGCAGGAGAATCAGGAGATCAAGGCCAGCCTTaGCTACATGTTGAGTTCACCAAAGCCAGCCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: LRAGESGDQGQP*LHVEFTKASLS Trigger: ACTCAGGCTGGCTTTGGTGAACTCAACATGTAGCCAAGGCTGGCCTTGATCTCCTGATTCTCCTGCCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 72 bp | ATGAAGACACACTTCTGGAGTCCAGTACTTGAGAGCTaGGGGCAGGAGAATCAGGAGATCAAGGCCAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: MKTHFWSPVLES*GQENQEIKASL Trigger: AAGGCTGGCCTTGATCTCCTGATTCTCCTGCCCTCAGCTCTCAAGTACTGGACTCCAGAAGTGTGTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 72 bp | AGAATCAGGAGATCAAGGCCAGCCTTGGCTACATGTTaGGTTCACCAAAGCCAGCCTGAGTATATGAGACCC | + |
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Preference number: 3 (lower is better) Translates to: RIRRSRPALATC*VHQSQPEYMRP Trigger: GGGTCTCATATACTCAGGCTGGCTTTGGTGAACTCAACATGTAGCCAAGGCTGGCCTTGATCTCCTGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 72 bp | AGCCTTGGCTACATGTTGAGTTCACCAAAGCCAGCCTaGGTATATGAGACCCTGTCTCAAACAAGGACACAA | + |
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Preference number: 3 (lower is better) Translates to: SLGYMLSSPKPA*VYETLSQTRTQ Trigger: TTGTGTCCTTGTTTGAGACAGGGTCTCATATACTCAGGCTGGCTTTGGTGAACTCAACATGTAGCCAAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 72 bp | GACAGCAGGTGTGCACTTCCCTGTCTGGACACACACTaGGTTTGTACTTTAGATCACAGCATTGCCTTAATC | + |
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Preference number: 3 (lower is better) Translates to: DSRCALPCLDTH*VCTLDHSIALI Trigger: GATTAAGGCAATGCTGTGATCTAAAGTACAAACTCAGTGTGTGTCCAGACAGGGAAGTGCACACCTGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 72 bp | CTACATGTTGAGTTCACCAAAGCCAGCCTGAGTATATaGGACCCTGTCTCAAACAAGGACACAAACCAACTA | + |
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Preference number: 3 (lower is better) Translates to: LHVEFTKASLSI*DPVSNKDTNQL Trigger: TAGTTGGTTTGTGTCCTTGTTTGAGACAGGGTCTCATATACTCAGGCTGGCTTTGGTGAACTCAACATGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 72 bp | CTTTCTTGGTTCTTCTCAATCAAGGAGGTCTGGCTATaGCCAGAATCTGAAGATTGCTATGTGAACCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LSWFFSIKEVWL*PESEDCYVNQA Trigger: AGCCTGGTTCACATAGCAATCTTCAGATTCTGGTCATAGCCAGACCTCCTTGATTGAGAAGAACCAAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| 3UTR TCA 72 bp | CGTCCCAACGGTCCTCTTCAGGTGTTAGTATTCTGGTaGTGTAATTTTCTTCACAATTTCCTGGACATTAGA | + |
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Preference number: 3 (lower is better) Translates to: RPNGPLQVLVFW*CNFLHNFLDIR Trigger: TCTAATGTCCAGGAAATTGTGAAGAAAATTACATCACCAGAATACTAACACCTGAAGAGGACCGTTGGGACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
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| 3UTR CCA 72 bp | ACAAAACATCAATGTTTCATAGGCTATAATTTCCCCTaGTTAGGCAAATATTCATTGCTATCACCTACACAT | + |
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Preference number: 3 (lower is better) Translates to: TKHQCFIGYNFP*LGKYSLLSPTH Trigger: ATGTGTAGGTGATAGCAATGAATATTTGCCTAACCAGGGGAAATTATAGCCTATGAAACATTGATGTTTTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR CCA 90 bp | CTGCCCTGTCTGCATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGATGTGCATCAGGCGAGACCCACTaGCCAGCTCCGGGGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LPCLHSRCALPCLDSRCASGETH*PAPGEA Trigger: CGCCTCCCCCGGAGCTGGCCAGTGGGTCTCGCCTGA...TGCACATCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGCAGACAGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR TCA 90 bp | CACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGCTGGCTCCAGCACTGTaGGGCTCTCAGCAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HCPVWTAGVHCPVWTAGVLAPAL*GSQQRC Trigger: ACACCTCTGCTGAGAGCCTCACAGTGCTGGAGCCAG...CACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR CCA 90 bp | CACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGTTCTGCGCGGGAGCATaGCATTCTGGCTCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: HCPVWTAGVHCPVWTAGVFCAGA*HSGSST Trigger: AGTGCTGGAGCCAGAATGCCATGCTCCCGCGCAGAA...CACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR GCA 90 bp | CACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGCTTCTCCTGCGCTCTTaGTCTTTCTCCCTCGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: HCPVWTAGVHCPVWTAGVLLLRS*SFSLAR Trigger: TCTAGCGAGGGAGAAAGAGCAAGAGCGCAGGAGAAG...CACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR TCA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGGTGCTGTGCTCTGCTaGGCAAGGGGAGCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPNTGITAGVHCPVWTAGGAVLC*ARGASA Trigger: TGCTGAAGCTCCCCTTGCTCAGCAGAGCACAGCACC...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | GTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTTCACCTGAAAGAGGCTaGGTCTGCACAGATGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHCPVWTAGVHCPVWTAGSPERG*VCTDAV Trigger: CACTGCATCTGTGCAGACTCAGCCTCTTTCAGGTGA...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | GTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTAGGAGTTGTTGTGTCTaGTCGCCTCTTCACACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHCPVWTAGVHCPVWTAGRSCCV*SPLHTL Trigger: AAGGGTGTGAAGAGGCGAGCAGACACAACAACTCCT...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGGCTGCTCCTGAAGCTTaGCAAGATGCTGCACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CALPCLHSRCALPCLDSRAAPEA*QDAALV Trigger: AACGAGTGCAGCATCTTGCCAAGCTTCAGGAGCAGC...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGGGAGCATGGCATTCTaGCTCCAGCACTGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPNTGITAGVHCPVWTAGGSMAF*LQHCEA Trigger: AGCCTCACAGTGCTGGAGCCAGAATGCCATGCTCCC...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | GTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGCAGAGGTTATGTCTTaGACAGAAGATTGTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHCPVWTAGVHCPVWTAGAEVMS*TEDCIC Trigger: GCAGATACAATCTTCTGTGCAAGACATAACCTCTGC...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | CACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGCGGCTTCTTCTTCTTTaGTTGATTGATTTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCPVWTAGVHCPVWTAGVRLLLL*LIDFGL Trigger: AAGGCCAAAATCAATCAACCAAAGAAGAAGAAGCCG...CACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTAGATGCTGTGTCACTTaGCAACCAAGCATCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPNTGITAGVHCPVWTAGRCCVT*QPSICW Trigger: CCAGCAGATGCTTGGTTGCCAAGTGACACAGCATCT...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | GTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGATCCATGGGATTTTTaGCAACGTCATAGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VHCPVWTAGVHCPVWTAGDPWDF*QRHSSC Trigger: ACAACTACTATGACGTTGTCAAAAATCCCATGGATC...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGAGGAGATTCGCTACTTaGTTTAGCTATGGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CALPCLHSRCALPCLDSRRRFAT*FSYGSG Trigger: ACCACTTCCATAGCTAAAGCAAGTAGCGAATCTCCT...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTGCATAGCAGGTGTGCACTGTTGTAAGGTGGCATaGATGCATACTCTCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPVWTADVHCPVCIAGVHCCKVA*MHTLNR Trigger: CCTATTGAGAGTATGCATGCATGCCACCTTACAACA...GTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | AATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAGGCGTCCACCGGCTGTTaGAAAGGCCAAGAGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NETKLCFKRARAEEMLCKASTGC*KGQEKP Trigger: CGGCTTCTCTTGGCCTTTCCAACAGCCGGTGGACGC...CTTACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR CCA 90 bp | CACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGTTTAGGAAATATTTCTaGTTCAGAATCGCTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HCPVWTAGVHCPVWTAGVFRKYF*FRIAAV Trigger: GACAGCAGCGATTCTGAACCAGAAATATTTCCTAAA...CACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTTGAGAACATTGTGTTaGAGTCTTCTATGCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CALPCLHSRCALPCLDSRLRTLC*SLLCIR Trigger: CCGAATGCATAGAAGACTTCAACACAATGTTCTCAA...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | CTGCCCTGTCTGCATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGATGTGCAGCATCCTTATATTCTTaGTTGTCCATTTTCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPCLHSRCALPCLDSRCAASLYS*LSIFPL Trigger: CAAGGGGAAAATGGACAATCAAGAATATAAGGATGC...TGCACATCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGCAGACAGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGGCTGCTGTTCACTCTaGTCTTCTTCAAGAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPNTGITAGVHCPVWTAGGCCSL*SSSRDL Trigger: TAAGTCTCTTGAAGAAGATCAGAGTGAACAGCAGCC...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGCATCAGTCTGACATCTaGAGCAAATTCATATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CALPCLHSRCALPCLDSRHQSDI*SKFICI Trigger: GATGCATATGAATTTGCTGCAGATGTCAGACTGATG...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGCGCTGCCGCTGCTGCTaGTGCTGTCGGTCAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRRCRCC*CCRSGE Trigger: CTCGCCTGACCGACAGCAGCAGCAGCAGCGGCAGCG...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCACGGACCCCGAGGAGCTaGTGCTGCTGCTGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTWKPSILVRSSVTILTARTPRS*CCCCCR Trigger: GCGGCAGCAGCAGCAGCAGCAGCTCCTCGGGGTCCG...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | CACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGGTTCATCGGGAATCTTaGCAAAATGTAGTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HCPVWTAGVHCPVWTAGVVHRES*QNVVQK Trigger: TTTTTGAACTACATTTTGCCAAGATTCCCGATGAAC...CACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTCCATTGGGGTTTTTATaGTGGTGTAATAGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPNTGITAGVHCPVWTAGPLGFL*WCNSQA Trigger: TGCCTGACTATTACACCATCATAAAAACCCCAATGG...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCATGCCGCTGCCGCTGCTaGTGCTGCTGTCGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTWKPSILVRSSVTILTACRCRC*CCCRSG Trigger: GCCTGACCGACAGCAGCAGCAGCAGCGGCAGCGGCA...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | AACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGACCCCGAGGAGCTGCTaGTGCTGCTGCTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NHFNHAHCKHFYLSFKVETPRSC*CCCCRC Trigger: GCAGCGGCAGCAGCAGCAGCAGCAGCTCCTCGGGGT...CTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | GTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTTGTATTTTCTTTTACTaGCATGTTCACTGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VHCPVWTAGVHCPVWTAGCIFFY*HVHWLC Trigger: ACAAAGCCAGTGAACATGCCAGTAAAAGAAAATACA...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAACTGGGAGTGCTTCCCTaGGGCTCCGCATGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQLGVLP*GSAWCC Trigger: ACAGCACCATGCGGAGCCCCAGGGAAGCACTCCCAG...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGGCGTCCACCGGCTGTTaGAAAGGCCAAGAGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRASTGC*KGQEKP Trigger: CGGCTTCTCTTGGCCTTTCCAACAGCCGGTGGACGC...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | ATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAGGAGTTGTTGTGTCTaGTCGCCTCTTCACACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IMKQNCALREPGPRRCCVRSCCV*SPLHTL Trigger: AAGGGTGTGAAGAGGCGAGCAGACACAACAACTCCT...TACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR GCA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCACTCCGCATGGTGCTGTaGTCTGCTGAGCAAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTWKPSILVRSSVTILTALRMVL*SAEQGE Trigger: CTCCCCTTGCTCAGCAGAGCACAGCACCATGCGGAG...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | AACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGTGGGGCTCCGCATGGTaGTGTGCTCTGCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NHFNHAHCKHFYLSFKVEWGSAW*CALLSK Trigger: CTTGCTCAGCAGAGCACAGCACCATGCGGAGCCCCA...CTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAACGATCTCGTCCGGGTTaGAGTTTCTCAGGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQRSRPG*SFSGKA Trigger: AGCCTTCCCTGAGAAACTCCAACCCGGACGAGATCG...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAACTGAGTCTGCACAGATaGAGTGTTCTCTGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQLSLHR*SVLCGL Trigger: CAGGCCACAGAGAACACTGCATCTGTGCAGACTCAG...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | AATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAGCCAGAAGGAATCTCTTaGCGCTTAAAGACATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NETKLCFKRARAEEMLCKPEGIS*RLKTFS Trigger: AGAGAATGTCTTTAAGCGGCAAGAGATTCCTTCTGG...CTTACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR CCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAAATGCAGTGTTCTCTGTaGCCTGCAGATGCTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQMQCSL*PADAVS Trigger: TGACACAGCATCTGCAGGCCACAGAGAACACTGCAT...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | AATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTCCATTGGGGTTTTTATaGTGGTGTAATAGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNETKLCFKRARAEEMLCPLGFL*WCNSQA Trigger: TGCCTGACTATTACACCATCATAAAAACCCCAATGG...ACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR TCA 90 bp | AATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAGTTGAGAACATTGTGTTaGAGTCTTCTATGCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NETKLCFKRARAEEMLCKLRTLC*SLLCIR Trigger: CCGAATGCATAGAAGACTTCAACACAATGTTCTCAA...CTTACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR TCA 90 bp | AATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAGGATCCATGGGATTTTTaGCAACGTCATAGTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NETKLCFKRARAEEMLCKDPWDF*QRHSSC Trigger: ACAACTACTATGACGTTGTCAAAAATCCCATGGATC...CTTACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR TCA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCATGCTGCTTTCTCTGCTaGGGGCTTGTGCACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTWKPSILVRSSVTILTACCFLC*GLVHCL Trigger: CAAACAGTGCACAAGCCCTCAGCAGAGAAAGCAGCA...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | AACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGCATTAAGCTGCTCCTaGAGCTTGGCAAGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NHFNHAHCKHFYLSFKVEALSCS*SLARCC Trigger: GCAGCATCTTGCCAAGCTTCAGGAGCAGCTTAATGC...CTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | AACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGTGTTCTCTGTGGCCTaGAGATGCTGTGTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHFNHAHCKHFYLSFKVEVFSVA*RCCVTW Trigger: CCAAGTGACACAGCATCTGCAGGCCACAGAGAACAC...CTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | AATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAGTTGTTGCTGAGAGTCTaGCAAAACGTTCTTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NETKLCFKRARAEEMLCKLLLRV*QNVLYC Trigger: ACAGTAAAGAACGTTTTGCCAGACTCTCAGCAACAA...CTTACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR TCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAAACTTTGTGTTGTTGCTaGGAGTCTGGCAAAACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQTLCCC*ESGKTF Trigger: GAACGTTTTGCCAGACTCTCAGCAACAACACAAAGT...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAACAGGGAAGGCTCCCTTaGCTGTATTATGTGAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQQGRLP*LYYVNY Trigger: ATAGTTCACATAATACAGTCAAGGGAGCCTTCCCTG...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | ATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAACTTCTCTAGAGCTTaGGCCATAACAACAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IMKQNCALREPGPRRCCVNFSRA*AITTMS Trigger: TGACATTGTTGTTATGGCCCAAGCTCTAGAGAAGTT...TACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR TCA 90 bp | AACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGAGACTTCAGTACACTTaGTGCTTTCACTGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NHFNHAHCKHFYLSFKVERLQYT*CFHWLP Trigger: GGGAAGCCAGTGAAAGCATCAAGTGTACTGAAGTCT...CTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAACCAGAAGGAATCTCTTaGCGCTTAAAGACATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQPEGIS*RLKTFS Trigger: AGAGAATGTCTTTAAGCGGCAAGAGATTCCTTCTGG...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | ATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAATTATAGAAGGGCCATaGATACGGCAAATGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IMKQNCALREPGPRRCCVIIEGP*IRQMFL Trigger: AAGAAACATTTGCCGTATGCATGGCCCTTCTATAAT...TACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR CCA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGTTACGTAATGGAACTTaGGACAGAACTTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRLRNGT*DRTCSC Trigger: GCAGCTGCAAGTTCTGTCCCAAGTTCCATTACGTAA...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCATTCCTACAATTCAGCTaGTTGTTGACGTCCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTWKPSILVRSSVTILTAFLQFS*LLTSSN Trigger: GTTGCTGGACGTCAACAATCAGCTGAATTGTAGGAA...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGCTGTTTGTTGTAAGGTaGCATGCATGCATACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRLFVVR*HACILS Trigger: TGAGAGTATGCATGCATGCCACCTTACAACAAACAG...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAAATTATAGAAGGGCCATaGATACGGCAAATGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQIIEGP*IRQMFL Trigger: AAGAAACATTTGCCGTATGCATGGCCCTTCTATAAT...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR GCA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGTTGGCCTTCTCCTTTTaGTTCATTTGCTTAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRLAFSF*FICLGF Trigger: AAAGCCTAAGCAAATGAAGCAAAAGGAGAAGGCCAA...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGTTGTTGCTGAGAGTCTaGCAAAACGTTCTTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRLLLRV*QNVLYC Trigger: ACAGTAAAGAACGTTTTGCCAGACTCTCAGCAACAA...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | AACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGAACTTCTCTAGAGCTTaGGCCATAACAACAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NHFNHAHCKHFYLSFKVENFSRA*AITTMS Trigger: TGACATTGTTGTTATGGCCCAAGCTCTAGAGAAGTT...CTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CCA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAACTTAGGCTTTTTCCTTaGGTTTTCATCTCTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LNMELAENLTHCDSHGNQLRLFP*VFISVI Trigger: AATAACAGAGATGAAAACCCAAGGAAAAAGCCTAAG...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR TCA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCATCTTCTTTGGTTGATTaGTTTTGGCCTTCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTWKPSILVRSSVTILTASSLVD*FWPSPF Trigger: AAAAGGAGAAGGCCAAAATCAATCAACCAAAGAAGA...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| 3UTR CAA 72 bp | ATAGGCTATAATTTCCCCTGGTTAGGCAAATATTCATaGCTATCACCTACACATTTTAAGAAATGTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IGYNFPWLGKYS*LSPTHFKKCLT Trigger: TGTCAGACATTTCTTAAAATGTGTAGGTGATAGCAATGAATATTTGCCTAACCAGGGGAAATTATAGCCTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | CTGGTTCAGAATCGCTGCTGTCGGAGGAGCTCGAGTCGCTGCTGCTaGTCGCGGACCCCGAGGAGCTGCTGCTGCTGCTGCTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVQNRCCRRSSSRCC*SRTPRSCCCCCCRC Trigger: GCAGCGGCAGCAGCAGCAGCAGCAGCTCCTCGGGGTCCGCGAGCAGCAGCAGCGACTCGAGCTCCTCCGACAGCAGCGATTCTGAACCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | ATATTTCTGGTTCAGAATCGCTGCTGTCGGAGGAGCTCGAGTCGCTaGTGCTGCTCGCGGACCCCGAGGAGCTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFLVQNRCCRRSSSR*CCSRTPRSCCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCTCCTCGGGGTCCGCGAGCAGCAGCAGCGACTCGAGCTCCTCCGACAGCAGCGATTCTGAACCAGAAATAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | TGTGCACTGCCCTGTCTACATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGGGCGTCCACCGGCTGTaGGAAAGGCCAAGAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CALPCLHSRCALPCLDSRGVHRL*ERPREA Trigger: GGCTTCTCTTGGCCTTTCCAACAGCCGGTGGACGCC...CCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGTAGACAGGGCAGTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | GCAACCAAGCATCTGCTGGGAGTGCTTCCCTGGGGCTCCGCATGGTaGTGTGCTCTGCTGAGCAAGGGGAGCTTCAGCAGAGGTTATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ATKHLLGVLPWGSAW*CALLSKGSFSRGYV Trigger: GACATAACCTCTGCTGAAGCTCCCCTTGCTCAGCAGAGCACAGCACCATGCGGAGCCCCAGGGAAGCACTCCCAGCAGATGCTTGGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | AGTTTCACGGCGTCCACCGGCTGTTGGAAAGGCCAAGAGAAGCCGTaGTTCCACAGGGCCTTCAGCACAACCCTCTGTAGGAACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFTASTGCWKGQEKP*FHRAFSTTLCRNCS Trigger: GCTGCAGTTCCTACAGAGGGTTGTGCTGAAGGCCCTGTGGAAGCACGGCTTCTCTTGGCCTTTCCAACAGCCGGTGGACGCCGTGAAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
||
| CDS GCA 90 bp | CAAGCATCTGCTGGGAGTGCTTCCCTGGGGCTCCGCATGGTGCTGTaGTCTGCTGAGCAAGGGGAGCTTCAGCAGAGGTTATGTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QASAGSASLGLRMVL*SAEQGELQQRLCLA Trigger: TGCAAGACATAACCTCTGCTGAAGCTCCCCTTGCTCAGCAGAGCACAGCACCATGCGGAGCCCCAGGGAAGCACTCCCAGCAGATGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS TCA 90 bp | TGCTGGGAGTGCTTCCCTGGGGCTCCGCATGGTGCTGTGCTCTGCTaGGCAAGGGGAGCTTCAGCAGAGGTTATGTCTTGCACAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CWECFPGAPHGAVLC*ARGASAEVMSCTED Trigger: ATCTTCTGTGCAAGACATAACCTCTGCTGAAGCTCCCCTTGCTCAGCAGAGCACAGCACCATGCGGAGCCCCAGGGAAGCACTCCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | CACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGTGTTGTCTCCAGGCAGTTaGTTTATGTCCAAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HCPVWTAGVHCPVWTAGVLSPGS*FMSKLS Trigger: GCTGAGCTTGGACATAAACAAACTGCCTGGAGACAA...CACACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | GTCCCCCGAGGAGGCCTCGCTGCTGCTTTCTCTGCTGAGGGCTTGTaGACTGTTTGTTGTAAGGTGGCATGCATGCATACTCTCAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPRGGLAAAFSAEGL*TVCCKVACMHTLNR Trigger: CCTATTGAGAGTATGCATGCATGCCACCTTACAACAAACAGTGCACAAGCCCTCAGCAGAGAAAGCAGCAGCGAGGCCTCCTCGGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | CTGCCCTGTCTGCATAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGATGTGCAGCTAGATTCCGGTCTTaGAGAAGCCAGAGCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCLHSRCALPCLDSRCAARFRS*RSQSLL Trigger: AAGCAAGCTCTGGCTTCTCAAAGACCGGAATCTAGC...TGCACATCTGCTGTCCAGACAGGGCAGTGCACACCTGCTATGCAGACAGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTGCATAGCAGGTGTGCACTTGTCCATTTTCCCCTaGATCGTTCCGAGATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CPVWTADVHCPVCIAGVHLSIFP*IVPRSM Trigger: CATGGATCTCGGAACGATCAAGGGGAAAATGGACAA...GTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | GTGTCTGCTCGCCTCTTCACACCCTTTGTAATTTGGACCAGAGACTaGGAGTCACAGATCGGGGGAGCTTCTTGTGCCATGTTTAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSARLFTPFVIWTRD*ESQIGGASCAMFKG Trigger: GCCCTTAAACATGGCACAAGAAGCTCCCCCGATCTGTGACTCGCAGTCTCTGGTCCAAATTACAAAGGGTGTGAAGAGGCGAGCAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
||
| CDS-3UTR CAA 90 bp | AATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTAAGGGCGTCCACCGGCTGTaGGAAAGGCCAAGAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NETKLCFKRARAEEMLCKGVHRL*ERPREA Trigger: GGCTTCTCTTGGCCTTTCCAACAGCCGGTGGACGCC...CTTACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR CAA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTAACTTGGGACAGAACTaGCAGCTGCTGATGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPNTGITAGVHCPVWTAGNLGQN*QLLMNS Trigger: GCTGTTCATCAGCAGCTGCAAGTTCTGTCCCAAGTT...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTGCATAGCAGGTGTGCACGTTAACAATAGCTGTTaGTCGACTTGGCAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: CPVWTADVHCPVCIAGVHVNNSC*STWQRH Trigger: ATGTCTCTGCCAAGTCGACAAACAGCTATTGTTAAC...GTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | GTTCACTGCCCTGTCTGGACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTGGTTCATCGGGAATCTaGGCAAAATGTAGTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VHCPVWTAGVHCPVWTAGGSSGI*AKCSSK Trigger: TTTTGAACTACATTTTGCCAAGATTCCCGATGAACC...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTCCAGACAGGGCAGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGTCTGGACAGCAGATGTGCACTGCCCTGTCTGCATAGCAGGTGTGCACCTCCTTTTGCTTCATTaGCTTAGGCTTTTTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPVWTADVHCPVCIAGVHLLLLH*LRLFPW Trigger: CCAAGGAAAAAGCCTAAGCAAATGAAGCAAAAGGAG...GTGCACACCTGCTATGCAGACAGGGCAGTGCACATCTGCTGTCCAGACAGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTTGCTGGACGTTTCGTTaGCCGTTTCCTACAATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPNTGITAGVHCPVWTAGCWTFR*PFPTIQ Trigger: CTGAATTGTAGGAAACGGCAAACGAAACGTCCAGCA...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS TCA 90 bp | GATCTCGATCTCGTCCGGGTTGGAGTTTCTCAGGGAAGGCTCCCTTaGCTGTATTATGTGAACTATTCGACCAAGCTTGTCTCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DLDLVRVGVSQGRLP*LYYVNYSTKLVSRQ Trigger: CTGCCTGGAGACAAGCTTGGTCGAATAGTTCACATAATACAGTCAAGGGAGCCTTCCCTGAGAAACTCCAACCCGGACGAGATCGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS CCA 90 bp | TTTTCAGAATGGAGCTCCTCCTTAGACCTGACAACCTTCTTTGCTTaGGGCTTCAGCGACCTCTTCCTCAGACAGGCCAGGACATACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSEWSSSLDLTTFFA*GFSDLFLRQARTYF Trigger: GAAGTATGTCCTGGCCTGTCTGAGGAAGAGGTCGCTGAAGCCCCAAGCAAAGAAGGTTGTCAGGTCTAAGGAGGAGCTCCATTCTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | CCCCCAAATACTGGAATTACAGCAGGTGTGCACTGCCCTGTCTGGACAGCAGGTAAGACTTCAGTACACTaGATGCTTTCACTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPNTGITAGVHCPVWTAGKTSVH*MLSLAS Trigger: GGAAGCCAGTGAAAGCATCAAGTGTACTGAAGTCTT...ACCTGCTGTCCAGACAGGGCAGTGCACACCTGCTGTAATTCCAGTATTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | TTTAAGGGCGAGAGAGAGATGTCAGGAAGCCCAGAAGGAATCTCTTaGCGCTTAAAGACATTCTCTGCCGCTTTGGAGGGGATTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FKGEREMSGSPEGIS*RLKTFSAALEGICS Trigger: GGAACAAATCCCCTCCAAAGCGGCAGAGAATGTCTTTAAGCGGCAAGAGATTCCTTCTGGGCTTCCTGACATCTCTCTCTCGCCCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
||
| CDS CCA 90 bp | CTGCTGCTTTCTCTGCTGAGGGCTTGTGCACTGTTTGTTGTAAGGTaGCATGCATGCATACTCTCAATAGGTTCATCGGGAATCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLSLLRACALFVVR*HACILSIGSSGILA Trigger: TGCCAAGATTCCCGATGAACCTATTGAGAGTATGCATGCATGCCACCTTACAACAAACAGTGCACAAGCCCTCAGCAGAGAAAGCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS TCA 90 bp | TCCGGGTTGGAGTTTCTCAGGGAAGGCTCCCTTGACTGTATTATGTaGACTATTCGACCAAGCTTGTCTCCAGGCAGTTTGTTTATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLEFLREGSLDCIM*TIRPSLSPGSLFMS Trigger: GGACATAAACAAACTGCCTGGAGACAAGCTTGGTCGAATAGTTCACATAATACAGTCAAGGGAGCCTTCCCTGAGAAACTCCAACCCGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS GCA 90 bp | TTCGCTACTTGCTTTAGCTATGGAAGTGGTAGGAGTTGTTGTGTCTaGTCGCCTCTTCACACCCTTTGTAATTTGGACCAGAGACTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FATCFSYGSGRSCCV*SPLHTLCNLDQRLR Trigger: TCGCAGTCTCTGGTCCAAATTACAAAGGGTGTGAAGAGGCGAGCAGACACAACAACTCCTACCACTTCCATAGCTAAAGCAAGTAGCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
||
| CDS GCA 90 bp | GTTCACTGGCTTTGTTTCTCTAAGTGTCGGAGGAGATTCGCTACTTaGTTTAGCTATGGAAGTGGTAGGAGTTGTTGTGTCTGCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHWLCFSKCRRRFAT*FSYGSGRSCCVCSP Trigger: AGGCGAGCAGACACAACAACTCCTACCACTTCCATAGCTAAAGCAAGTAGCGAATCTCCTCCGACACTTAGAGAAACAAAGCCAGTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
||
| CDS GCA 90 bp | GCTTTCTCTGCTGAGGGCTTGTGCACTGTTTGTTGTAAGGTGGCATaGATGCATACTCTCAATAGGTTCATCGGGAATCTTGGCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: AFSAEGLCTVCCKVA*MHTLNRFIGNLGKM Trigger: CATTTTGCCAAGATTCCCGATGAACCTATTGAGAGTATGCATGCATGCCACCTTACAACAAACAGTGCACAAGCCCTCAGCAGAGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | ATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTACGCTTTGGAGGGGATTaGTTCCTTAGCAGAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IMKQNCALREPGPRRCCVRFGGD*FLSRGN Trigger: GTTTCCTCTGCTAAGGAACAAATCCCCTCCAAAGCG...TACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR CAA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGTCGATCTCGTCCGGGTaGGAGTTTCTCAGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRSISSG*EFLREG Trigger: GCCTTCCCTGAGAAACTCCAACCCGGACGAGATCGA...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | AATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTGTTAACAATAGCTGTTaGTCGACTTGGCAGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: NNETKLCFKRARAEEMLCVNNSC*STWQRH Trigger: ATGTCTCTGCCAAGTCGACAAACAGCTATTGTTAAC...ACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR CAA 90 bp | ACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGGCGCTTTGGAGGGGATTaGTTCCTTAGCAGAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TTLTTPTVNTFTFHLKLRRFGGD*FLSRGN Trigger: GTTTCCTCTGCTAAGGAACAAATCCCCTCCAAAGCG...CCTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCACTTACCACCCACAACTaGCTCTTCTTGTGGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTWKPSILVRSSVTILTALTTHN*LFLWHL Trigger: CAGATGCCACAAGAAGAGCAAGTTGTGGGTGGTAAG...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAATCAGGGAAGGCTCCCTaGACTGTATTATGTGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: LNMELAENLTHCDSHGNQSGKAP*TVLCEL Trigger: TAGTTCACATAATACAGTCAAGGGAGCCTTCCCTGA...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
||
| CDS-3UTR CAA 90 bp | AATAATGAAACAAAACTGTGCTTTAAGAGAGCCAGGGCCGAGGAGATGCTGTGTTACGGCAAATGTTTCTaGGCAAGCATTTCTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NNETKLCFKRARAEEMLCYGKCF*ASISLR Trigger: TCTTAAAGAAATGCTTGCCAAGAAACATTTGCCGTA...ACACAGCATCTCCTCGGCCCTGGCTCTCTTAAAGCACAGTTTTGTTTCATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112677.10 |
||
| CDS-3UTR CAA 90 bp | AACCACTTTAACCACGCCCACTGTAAACACTTTTACCTTTCATTTAAAGTTGAGTTCTCTGCTGAGGGCTaGTGCACTGTTTGTTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: NHFNHAHCKHFYLSFKVEFSAEG*CTVCCK Trigger: CTTACAACAAACAGTGCACAAGCCCTCAGCAGAGAA...CTCAACTTTAAATGAAAGGTAAAAGTGTTTACAGTGGGCGTGGTTAAAGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 90 bp | GTAACAGTTCATGAACATCAGTCTGACATCTGCAGCAAATTCATATaGATCCTTATATTCTTGATTGTCCATTTTCCCCTTGATCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: VTVHEHQSDICSKFI*ILIFLIVHFPLDRS Trigger: GGAACGATCAAGGGGAAAATGGACAATCAAGAATATAAGGATGCATATGAATTTGCTGCAGATGTCAGACTGATGTTCATGAACTGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR CAA 90 bp | TTAAACATGGAACTAGCAGAGAATCTGACACACTGTGACTCACATGGAAACCAATACGGCAAATGTTTCTaGGCAAGCATTTCTTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: LNMELAENLTHCDSHGNQYGKCF*ASISLR Trigger: TCTTAAAGAAATGCTTGCCAAGAAACATTTGCCGTA...TTGGTTTCCATGTGAGTCACAGTGTGTCAGATTCTCTGCTAGTTCCATGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR CAA 90 bp | GACACATATCTCTTTGAAAAGTTAACAACTCAGCCAGGCATGAAGACACACTTCTGCATCCTTATATTCTaGATTGTCCATTTTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: DTYLFEKLTTQPGMKTHFCILIF*IVHFPL Trigger: AAGGGGAAAATGGACAATCAAGAATATAAGGATGCA...GAAGTGTGTCTTCATGCCTGGCTGAGTTGTTAACTTTTCAAAGAGATATGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS-3UTR CAA 90 bp | CTCACATGGAAACCAAGTATTCTTGTTAGAAGTTCTGTTACAATTCTGACAGCATTTGGCCTTCTCCTTTaGCTTCATTTGCTTAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LTWKPSILVRSSVTILTAFGLLL*LHLLRL Trigger: AAGCCTAAGCAAATGAAGCAAAAGGAGAAGGCCAAA...TGCTGTCAGAATTGTAACAGAACTTCTAACAAGAATACTTGGTTTCCATGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 90 bp | GGCAAATGTTTCTTGGCAAGCATTTCTTTAAGAATCTCGCTGCAGTaGTTTAATTGCTCCGTTACTTTGACTGTTTTTAAAACTTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GKCFLASISLRISLQ*FNCSVTLTVFKTLC Trigger: ACACAAAGTTTTAAAAACAGTCAAAGTAACGGAGCAATTAAAGCACTGCAGCGAGATTCTTAAAGAAATGCTTGCCAAGAAACATTTGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS GCA 90 bp | GGGAGGATTATACTTGTAACAGTTCATGAACATCAGTCTGACATCTaGAGCAAATTCATATGCATCCTTATATTCTTGATTGTCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: GRIILVTVHEHQSDI*SKFICILIFLIVHF Trigger: AAAATGGACAATCAAGAATATAAGGATGCATATGAATTTGCTGCAGATGTCAGACTGATGTTCATGAACTGTTACAAGTATAATCCTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | AATCGCTGCTGTCGGAGGAGCTCGAGTCGCTGCTGCTaGTCGCGGACCCCGAGGAGCTGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: NRCCRRSSSRCC*SRTPRSCCCCC Trigger: GCAGCAGCAGCAGCAGCTCCTCGGGGTCCGCGAGCAGCAGCAGCGACTCGAGCTCCTCCGACAGCAGCGATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | CAGAATCGCTGCTGTCGGAGGAGCTCGAGTCGCTGCTaGTGCTCGCGGACCCCGAGGAGCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QNRCCRRSSSRC*CSRTPRSCCCC Trigger: GCAGCAGCAGCAGCTCCTCGGGGTCCGCGAGCAGCAGCAGCGACTCGAGCTCCTCCGACAGCAGCGATTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | CATCTGCTGGGAGTGCTTCCCTGGGGCTCCGCATGGTaGTGTGCTCTGCTGAGCAAGGGGAGCTTCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HLLGVLPWGSAW*CALLSKGSFSR Trigger: TCTGCTGAAGCTCCCCTTGCTCAGCAGAGCACAGCACCATGCGGAGCCCCAGGGAAGCACTCCCAGCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | GCGTCCACCGGCTGTTGGAAAGGCCAAGAGAAGCCGTaGTTCCACAGGGCCTTCAGCACAACCCTCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: ASTGCWKGQEKP*FHRAFSTTLCR Trigger: CCTACAGAGGGTTGTGCTGAAGGCCCTGTGGAAGCACGGCTTCTCTTGGCCTTTCCAACAGCCGGTGGACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS GCA 72 bp | TGCTGTGTCACTTGGCAACCAAGCATCTGCTGGGAGTaGTTCCCTGGGGCTCCGCATGGTGCTGTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CCVTWQPSICWE*FPGAPHGAVLC Trigger: GCAGAGCACAGCACCATGCGGAGCCCCAGGGAAGCACTCCCAGCAGATGCTTGGTTGCCAAGTGACACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CCA 72 bp | TGCAGATGCTGTGTCACTTGGCAACCAAGCATCTGCTaGGAGTGCTTCCCTGGGGCTCCGCATGGTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CRCCVTWQPSIC*ECFPGAPHGAV Trigger: CACAGCACCATGCGGAGCCCCAGGGAAGCACTCCCAGCAGATGCTTGGTTGCCAAGTGACACAGCATCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CCA 72 bp | GCAGTGTTCTCTGTGGCCTGCAGATGCTGTGTCACTTaGCAACCAAGCATCTGCTGGGAGTGCTTCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AVFSVACRCCVT*QPSICWECFPG Trigger: CCCAGGGAAGCACTCCCAGCAGATGCTTGGTTGCCAAGTGACACAGCATCTGCAGGCCACAGAGAACACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CAA 90 bp | GGCGTCCCCCGAGGAGGCCTCGCTGCTGCTTTCTCTGCTGAGGGCTaGTGCACTGTTTGTTGTAAGGTGGCATGCATGCATACTCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: GVPRGGLAAAFSAEG*CTVCCKVACMHTLN Trigger: ATTGAGAGTATGCATGCATGCCACCTTACAACAAACAGTGCACAAGCCCTCAGCAGAGAAAGCAGCAGCGAGGCCTCCTCGGGGGACGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CCA 72 bp | TGGAGCTCCTCCTTAGACCTGACAACCTTCTTTGCTTaGGGCTTCAGCGACCTCTTCCTCAGACAGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WSSSLDLTTFFA*GFSDLFLRQAR Trigger: CCTGGCCTGTCTGAGGAAGAGGTCGCTGAAGCCCCAAGCAAAGAAGGTTGTCAGGTCTAAGGAGGAGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CAA 72 bp | TGCAGTGTTCTCTGTGGCCTGCAGATGCTGTGTCACTaGGCAACCAAGCATCTGCTGGGAGTGCTTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSVLCGLQMLCH*ATKHLLGVLPW Trigger: CCAGGGAAGCACTCCCAGCAGATGCTTGGTTGCCAAGTGACACAGCATCTGCAGGCCACAGAGAACACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | GTCTGCACAGATGCAGTGTTCTCTGTGGCCTGCAGATaGTGTGTCACTTGGCAACCAAGCATCTGCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VCTDAVFSVACR*CVTWQPSICWE Trigger: CTCCCAGCAGATGCTTGGTTGCCAAGTGACACAGCATCTGCAGGCCACAGAGAACACTGCATCTGTGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CAA 72 bp | CGAGGAGGCCTCGCTGCTGCTTTCTCTGCTGAGGGCTaGTGCACTGTTTGTTGTAAGGTGGCATGCATGCAT | + |
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Preference number: 6 (lower is better) Translates to: RGGLAAAFSAEG*CTVCCKVACMH Trigger: ATGCATGCATGCCACCTTACAACAAACAGTGCACAAGCCCTCAGCAGAGAAAGCAGCAGCGAGGCCTCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CAA 72 bp | ATGGAGCTCCTCCTTAGACCTGACAACCTTCTTTGCTaGGGGCTTCAGCGACCTCTTCCTCAGACAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MELLLRPDNLLC*GLQRPLPQTGQ Trigger: CTGGCCTGTCTGAGGAAGAGGTCGCTGAAGCCCCAAGCAAAGAAGGTTGTCAGGTCTAAGGAGGAGCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS TCA 72 bp | GCTGGACGTTTCGTTTGCCGTTTCCTACAATTCAGCTaGTTGTTGACGTCCAGCAACCGCCTCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AGRFVCRFLQFS*LLTSSNRLSSS Trigger: GGAGCTGGAGAGGCGGTTGCTGGACGTCAACAATCAGCTGAATTGTAGGAAACGGCAAACGAAACGTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | AGAATGGAGCTCCTCCTTAGACCTGACAACCTTCTTTaGTTGGGGCTTCAGCGACCTCTTCCTCAGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: RMELLLRPDNLL*LGLQRPLPQTG Trigger: GCCTGTCTGAGGAAGAGGTCGCTGAAGCCCCAAGCAAAGAAGGTTGTCAGGTCTAAGGAGGAGCTCCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS TCA 72 bp | CCAAGCAATACTCGCTTGCAATCACCTGAAAGAGGCTaGGTCTGCACAGATGCAGTGTTCTCTGTGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSNTRLQSPERG*VCTDAVFSVAC Trigger: GCAGGCCACAGAGAACACTGCATCTGTGCAGACTCAGCCTCTTTCAGGTGATTGCAAGCGAGTATTGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | GAGAGAGAGATGTCAGGAAGCCCAGAAGGAATCTCTTaGCGCTTAAAGACATTCTCTGCCGCTTTGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: EREMSGSPEGIS*RLKTFSAALEG Trigger: CCCCTCCAAAGCGGCAGAGAATGTCTTTAAGCGGCAAGAGATTCCTTCTGGGCTTCCTGACATCTCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CCA 72 bp | AAAGAGGCTGAGTCTGCACAGATGCAGTGTTCTCTGTaGCCTGCAGATGCTGTGTCACTTGGCAACCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KEAESAQMQCSL*PADAVSLGNQA Trigger: TGCTTGGTTGCCAAGTGACACAGCATCTGCAGGCCACAGAGAACACTGCATCTGTGCAGACTCAGCCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CAA 72 bp | CGAGAGAGAGATGTCAGGAAGCCCAGAAGGAATCTCTaGCCGCTTAAAGACATTCTCTGCCGCTTTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RERDVRKPRRNL*PLKDILCRFGG Trigger: CCCTCCAAAGCGGCAGAGAATGTCTTTAAGCGGCAAGAGATTCCTTCTGGGCTTCCTGACATCTCTCTCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CAA 72 bp | CGGGGGCGGCTTCTCCACTTTTGCTGGACGTTTCGTTaGCCGTTTCCTACAATTCAGCTGATTGTTGACGTC | + |
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Preference number: 6 (lower is better) Translates to: RGRLLHFCWTFR*PFPTIQLIVDV Trigger: GACGTCAACAATCAGCTGAATTGTAGGAAACGGCAAACGAAACGTCCAGCAAAAGTGGAGAAGCCGCCCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CAA 90 bp | CGATCTCGATCTCGTCCGGGTTGGAGTTTCTCAGGGAAGGCTCCCTaGACTGTATTATGTGAACTATTCGACCAAGCTTGTCTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RSRSRPGWSFSGKAP*TVLCELFDQACLQA Trigger: TGCCTGGAGACAAGCTTGGTCGAATAGTTCACATAATACAGTCAAGGGAGCCTTCCCTGAGAAACTCCAACCCGGACGAGATCGAGATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS TCA 72 bp | AGGGCCTTCAGCACAACCCTCTGTAGGAACTGCAGCTaGTTCGTCAACCGCCCACTCTTCTTAGTGTTTATG | + |
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Preference number: 6 (lower is better) Translates to: RAFSTTLCRNCS*FVNRPLFLVFM Trigger: CATAAACACTAAGAAGAGTGGGCGGTTGACGAATCAGCTGCAGTTCCTACAGAGGGTTGTGCTGAAGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CAA 90 bp | TTTTTCAGAATGGAGCTCCTCCTTAGACCTGACAACCTTCTTTGCTaGGGGCTTCAGCGACCTCTTCCTCAGACAGGCCAGGACATACTT | + |
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Preference number: 6 (lower is better) Translates to: FFRMELLLRPDNLLC*GLQRPLPQTGQDIL Trigger: AAGTATGTCCTGGCCTGTCTGAGGAAGAGGTCGCTGAAGCCCCAAGCAAAGAAGGTTGTCAGGTCTAAGGAGGAGCTCCATTCTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS TCA 72 bp | CTCGTCCGGGTTGGAGTTTCTCAGGGAAGGCTCCCTTaGCTGTATTATGTGAACTATTCGACCAAGCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LVRVGVSQGRLP*LYYVNYSTKLV Trigger: GACAAGCTTGGTCGAATAGTTCACATAATACAGTCAAGGGAGCCTTCCCTGAGAAACTCCAACCCGGACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS TCA 72 bp | GTTTCGTTTGCCGTTTCCTACAATTCAGCTGATTGTTaGCGTCCAGCAACCGCCTCTCCAGCTCCAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VSFAVSYNSADC*RPATASPAPAF Trigger: AAAAGCTGGAGCTGGAGAGGCGGTTGCTGGACGTCAACAATCAGCTGAATTGTAGGAAACGGCAAACGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CCA 72 bp | AAGCCAGAGCTTGCTTACGTCTTGAGCTTCCGACGGTaGCTGCTGTTCACTCTGATCTTCTTCAAGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: KPELAYVLSFRR*LLFTLIFFKRL Trigger: AAGTCTCTTGAAGAAGATCAGAGTGAACAGCAGCCACCGTCGGAAGCTCAAGACGTAAGCAAGCTCTGGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS CCA 72 bp | TCTCTGCTGAGGGCTTGTGCACTGTTTGTTGTAAGGTaGCATGCATGCATACTCTCAATAGGTTCATCGGGA | + |
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Preference number: 6 (lower is better) Translates to: SLLRACALFVVR*HACILSIGSSG Trigger: TCCCGATGAACCTATTGAGAGTATGCATGCATGCCACCTTACAACAAACAGTGCACAAGCCCTCAGCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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| CDS GCA 72 bp | TGCTTTAGCTATGGAAGTGGTAGGAGTTGTTGTGTCTaGTCGCCTCTTCACACCCTTTGTAATTTGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: CFSYGSGRSCCV*SPLHTLCNLDQ Trigger: CTGGTCCAAATTACAAAGGGTGTGAAGAGGCGAGCAGACACAACAACTCCTACCACTTCCATAGCTAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CAA 72 bp | CCGCTTAAAGACATTCTCTGCCGCTTTGGAGGGGATTaGTTCCTTAGCAGAGGAAACCGCTATCTTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PLKDILCRFGGD*FLSRGNRYLLL Trigger: CAACAAAAGATAGCGGTTTCCTCTGCTAAGGAACAAATCCCCTCCAAAGCGGCAGAGAATGTCTTTAAGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS GCA 72 bp | CTTTGTTTCTCTAAGTGTCGGAGGAGATTCGCTACTTaGTTTAGCTATGGAAGTGGTAGGAGTTGTTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LCFSKCRRRFAT*FSYGSGRSCCV Trigger: GACACAACAACTCCTACCACTTCCATAGCTAAAGCAAGTAGCGAATCTCCTCCGACACTTAGAGAAACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CAA 90 bp | CGCTTTGGAGGGGATTTGTTCCTTAGCAGAGGAAACCGCTATCTTTaGTTGGATATCTTTCTTTATTCTCTCCTTACCACCCACAACTTG | + |
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Preference number: 6 (lower is better) Translates to: RFGGDLFLSRGNRYL*LDIFLYSLLTTHNL Trigger: CAAGTTGTGGGTGGTAAGGAGAGAATAAAGAAAGATATCCAACAAAAGATAGCGGTTTCCTCTGCTAAGGAACAAATCCCCTCCAAAGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CAA 72 bp | GGGGATTTGTTCCTTAGCAGAGGAAACCGCTATCTTTaGTTGGATATCTTTCTTTATTCTCTCCTTACCACC | + |
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Preference number: 6 (lower is better) Translates to: GDLFLSRGNRYL*LDIFLYSLLTT Trigger: GGTGGTAAGGAGAGAATAAAGAAAGATATCCAACAAAAGATAGCGGTTTCCTCTGCTAAGGAACAAATCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CCA 72 bp | GTTCTTTACTGTATTTTCTTTTACTGGCATGTTCACTaGCTTTGTTTCTCTAAGTGTCGGAGGAGATTCGCT | + |
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Preference number: 6 (lower is better) Translates to: VLYCIFFYWHVH*LCFSKCRRRFA Trigger: AGCGAATCTCCTCCGACACTTAGAGAAACAAAGCCAGTGAACATGCCAGTAAAAGAAAATACAGTAAAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031215.15 ENSMUST00000112677.10 |
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| CDS CAA 72 bp | TCTGATCTTCTTCAAGAGACTTATCTTGCACTTTACTaGATAAAGATTCTAGAGTCAATCCACTTCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SDLLQETYLALY*IKILESIHFQA Trigger: AGCCTGGAAGTGGATTGACTCTAGAATCTTTATCAAGTAAAGTGCAAGATAAGTCTCTTGAAGAAGATCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031215.15 |
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