Pregenerated sensors for BRD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057649Ensembl transcript IDs: ENSMUST00000099384.4, ENSMUST00000222399.2, ENSMUST00000222749.2, ENSMUST00000223238.2, ENSMUST00000223525.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTCCCGAGCCTCATCAGCTGCGTGCTCTACCAGGGCTAGCACATaGTCCTCTGCCGTGCTGTCTGTCAGGCTGCAGGCATTCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LSRASSAACSTRAST*SSAVLSVRLQAFPS Trigger: TGAAGGGAATGCCTGCAGCCTGACAGACAGCACGGCAGAGGAGCATGTGCTAGCCCTGGTAGAGCACGCAGCTGATGAGGCTCGGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 90 bp | CCCGGGAGAAACCGGTTAATCCTGTCCCGAGCCTCATCAGCTGCGTaGTCTACCAGGGCTAGCACATGCTCCTCTGCCGTGCTGTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: PGRNRLILSRASSAA*STRASTCSSAVLSV Trigger: GACAGACAGCACGGCAGAGGAGCATGTGCTAGCCCTGGTAGAGCACGCAGCTGATGAGGCTCGGGACAGGATTAACCGGTTTCTCCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 90 bp | CATCAGCTGCGTGCTCTACCAGGGCTAGCACATGCTCCTCTGCCGTaGTGTCTGTCAGGCTGCAGGCATTCCCTTCAGGCTCAAACATGC | + |
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Preference number: 1 (lower is better) Translates to: HQLRALPGLAHAPLP*CLSGCRHSLQAQTC Trigger: GCATGTTTGAGCCTGAAGGGAATGCCTGCAGCCTGACAGACAGCACGGCAGAGGAGCATGTGCTAGCCCTGGTAGAGCACGCAGCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR TCA 90 bp | GCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTaGCGGTACAGACAAGCCAGCATCTTCCTCAGGCTGCTACTTGCC | + |
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Preference number: 1 (lower is better) Translates to: AYWTPFGATGPLLQT*RYRQASIFLRLLLA Trigger: GGCAAGTAGCAGCCTGAGGAAGATGCTGGCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR GCA 90 bp | CTCAGGTCCACAGGGTGTGTCTCCTCCATCAGCATCAGGCTCAGGTaGGTTCACCACGCTGTAGAGCAGACTTCCATCTCCAAGCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LRSTGCVSSISIRLR*VHHAVEQTSISKLL Trigger: AAGAAGCTTGGAGATGGAAGTCTGCTCTACAGCGTGGTGAACGCACCTGAGCCTGATGCTGATGGAGGAGACACACCCTGTGGACCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 90 bp | AAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCTTTGAGAACTaGAGGAAGGCTGTGCAAAGCTCCTGTAGAATGACTGTGTGCACA | + |
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Preference number: 1 (lower is better) Translates to: KEPSEGLVCRLPFEN*RKAVQSSCRMTVCT Trigger: TGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTTCTCAAAGGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR TCA 90 bp | TCCCCTTTGAGAACTGCAGGAAGGCTGTGCAAAGCTCCTGTAGAATaGCTGTGTGCACATCATCATGAACAGGCTTGGCTGCTGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPLRTAGRLCKAPVE*LCAHHHEQAWLLVL Trigger: GAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTTCTCAAAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR GCA 90 bp | AGTTTCTACTTGCACTGGGACAACCTCGGGAACAGGTTCCTCAGCTaGTGGGTCTTCACTGCCCAAGAGAGCTGCTTTGCTCATCATCTT | + |
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Preference number: 1 (lower is better) Translates to: SFYLHWDNLGNRFLS*WVFTAQESCFAHHL Trigger: AAGATGATGAGCAAAGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 90 bp | TGCTGCAGACGTGACGGTACAGACAAGCCAGCATCTTCCTCAGGCTaGTACTTGCCAGAGAGGATGAGACAAAAGTTTCTGTCTTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: CCRRDGTDKPASSSG*YLPERMRQKFLSCD Trigger: GTCACAAGACAGAAACTTTTGTCTCATCCTCTCTGGCAAGTAGCAGCCTGAGGAAGATGCTGGCTTGTCTGTACCGTCACGTCTGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR GCA 90 bp | GTGGTTCATTATTTGTCAGGGAGACAACTCCATCCTCTGGCTCAGTaGCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: VVHYLSGRQLHPLAQ*PNRKQKEPSEGLVC Trigger: GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAGAGGATGGAGTTGTCTCCCTGACAAATAATGAACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR TCA 90 bp | ACTCTCGTTGCTCTTGCAGAGGACTCGGGTTTGGTTCCACAGCACTaGCACAGTGGCTCACAGTTATATGTAACTACAGTTCCAGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: TLVALAEDSGLVPQH*HSGSQLYVTTVPGD Trigger: ATCTCCTGGAACTGTAGTTACATATAACTGTGAGCCACTGTGTCAGTGCTGTGGAACCAAACCCGAGTCCTCTGCAAGAGCAACGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 90 bp | ATAACTTCTCTACTCGGCTTTTTGGATTTCTTGGTAGTTTCTACTTaGACTGGGACAACCTCGGGAACAGGTTCCTCAGCTGCTGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: ITSLLGFLDFLVVST*TGTTSGTGSSAAGS Trigger: AGACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGTGTGTCTCCTCCATCAGCATCAGGCTCAGGTGCGTTCACCACGCTGTATGCTGTCTGTCAGGCTaGAGGCATTCCCTTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TGCVSSISIRLRCVHHAVCCLSG*RHSLQA Trigger: AGCCTGAAGGGAATGCCTGCAGCCTGACAGACAGCA...TACAGCGTGGTGAACGCACCTGAGCCTGATGCTGATGGAGGAGACACACCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCATGAACAGGCTTGGCTaGTGGTGCTCAGGAGACACA | + |
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Preference number: 2 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPMNRLG*WCSGDT Trigger: TGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCAT...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCATCTTGCCACCCGGGAGAAACCGGTTAATCCTGTCCCGAGCCTCATCAGCCGTGCAGGATCTTCTTaGCTAATTTGTAGTACACGG | + |
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Preference number: 2 (lower is better) Translates to: PHLATREKPVNPVPSLISRAGSS*LICSTR Trigger: CCGTGTACTACAAATTAGCCAAGAAGATCCTGCACG...GCTGATGAGGCTCGGGACAGGATTAACCGGTTTCTCCCGGGTGGCAAGATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAAACCGGTTAATCCTGTCCCGAGCCTCATCAGCTGCGTGCTCTACCAGGATCTTAAAGCCCGCGTaGAGGATCTTCTTGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: GRNRLILSRASSAACSTRILKPA*RIFLAN Trigger: ATTAGCCAAGAAGATCCTGCACGCGGGCTTTAAGAT...CCTGGTAGAGCACGCAGCTGATGAGGCTCGGGACAGGATTAACCGGTTTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCGTGCTGTCTGTCAGGCTGCAGGCATTCCCTTCAGGCTCAAACATGCAGTTGGTAGTTTCTACTTaGACTGGGACAACCTCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SAVLSVRLQAFPSGSNMQLVVST*TGTTSG Trigger: TCCCGAGGTTGTCCCAGTGCAAGTAGAAACTACCAA...CTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCCTGACAGACAGCACGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGTGTGTCTCCTCCATCAGCATCAGGCTCAGGTGCGTTCACCACGCTGTAGTAGTACACGGTGTCTaGTCTATTGTACGTCATCGC | + |
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Preference number: 2 (lower is better) Translates to: TGCVSSISIRLRCVHHAVVVHGV*SIVRHR Trigger: GCGATGACGTACAATAGACCAGACACCGTGTACTAC...TACAGCGTGGTGAACGCACCTGAGCCTGATGCTGATGGAGGAGACACACCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCACATCATCATGAACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTGCATCTTCCTCAGGCTaGTACTTGCCAGAGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: CAHHHEQAWLLVLRRHRVASSSG*YLPERM Trigger: CATCCTCTCTGGCAAGTAGCAGCCTGAGGAAGATGC...AACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCATCTTGCCACCCGGGAGAAACCGGTTAATCCTGTCCCGAGCCTCATCAGCCCCAAAATAGTCCTCTaGAAACACCTGCAACTAAAA | + |
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Preference number: 2 (lower is better) Translates to: PHLATREKPVNPVPSLISPKIVL*KHLQLK Trigger: TTTTAGTTGCAGGTGTTTGCAGAGGACTATTTTGGG...GCTGATGAGGCTCGGGACAGGATTAACCGGTTTCTCCCGGGTGGCAAGATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCACATTCTATTGCCACTaGTCAGAGCTTATTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPTFYCH*SELIGH Trigger: GTGTCCAATAAGCTCTGAGCAGTGGCAATAGAATGT...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACATCATCATGAACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTCTGCTCAGAGCTTATTaGACACCATTCGGTGCTACT | + |
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Preference number: 2 (lower is better) Translates to: CAHHHEQAWLLVLRRHRVLLRAY*TPFGAT Trigger: AGTAGCACCGAATGGTGTCCAATAAGCTCTGAGCAG...AACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR CAA 90 bp | GATAACTTCTCTACTCGGCTTTTTGGATTTCTTGGTAGTTTCTACTaGCACTGGGACAACCTCGGGAACAGGTTCCTCAGCTGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: DNFSTRLFGFLGSFY*HWDNLGNRFLSCWV Trigger: GACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTATTGCCACGCATCTTCCTCAGGCTaGTACTTGCCAGAGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: RRHRVEPSDCNPLTFYCHASSSG*YLPERM Trigger: CATCCTCTCTGGCAAGTAGCAGCCTGAGGAAGATGC...GTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCACCGTTGACATTCTATTaGCACTGCTCAGAGCTTATT | + |
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Preference number: 2 (lower is better) Translates to: NRLGCWCSGDTELSHLIAPLTFY*HCSELI Trigger: AATAAGCTCTGAGCAGTGGCAATAGAATGTCAACGG...TGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR CAA 90 bp | CCTTCAGGCTCAAACATGCAGCTGATAACTTCTCTACTCGGCTTTTaGGATTTCTTGGTAGTTTCTACTTGCACTGGGACAACCTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: PSGSNMQLITSLLGF*DFLVVSTCTGTTSG Trigger: TCCCGAGGTTGTCCCAGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCCTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTATTGCCACACTTGCCAGAGAGGATaGGACAAAAGTTTCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RRHRVEPSDCNPLTFYCHTCQRG*DKSFCL Trigger: AAGACAGAAACTTTTGTCTCATCCTCTCTGGCAAGT...GTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGGTGTGCACATCATCATaGACAGGCTTGGCTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TSFILHSKRWGGSLFVREVCTSS*TGLAAG Trigger: ACCAGCAGCCAAGCCTGTTCATGATGATGTGCACAC...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGCATCATGAACAGGCTTaGCTGCTGGTGCTCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TSFILHSKRWGGSLFVREHHEQA*LLVLRR Trigger: TCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATG...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGTCTATTGTACGTCATCGCATTATCACACATTAATTTGAAATCTGCCCAATTGGTTCCACAGCACTaGCACAGTGGCTCACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: SGLLYVIALSHINLKSAQLVPQH*HSGSQL Trigger: TAACTGTGAGCCACTGTGTCAGTGCTGTGGAACCAA...TTGGGCAGATTTCAAATTAATGTGTGATAATGCGATGACGTACAATAGACCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR CAA 90 bp | ACGGTGTCTGGTCTATTGTACGTCATCGCATTATCACACATTAATTaGAAATCTGCCCAAAATAGTCCTCTGCAAACACCTGCAACTAAA | + |
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Preference number: 2 (lower is better) Translates to: TVSGLLYVIALSHIN*KSAQNSPLQTPATK Trigger: TTTAGTTGCAGGTGTTTGCAGAGGACTATTTTGGGCAGATTTCAAATTAATGTGTGATAATGCGATGACGTACAATAGACCAGACACCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 72 bp | CGTGCTCTACCAGGGCTAGCACATGCTCCTCTGCCGTaGTGTCTGTCAGGCTGCAGGCATTCCCTTCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: RALPGLAHAPLP*CLSGCRHSLQA Trigger: AGCCTGAAGGGAATGCCTGCAGCCTGACAGACAGCACGGCAGAGGAGCATGTGCTAGCCCTGGTAGAGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 72 bp | AACCGGTTAATCCTGTCCCGAGCCTCATCAGCTGCGTaGTCTACCAGGGCTAGCACATGCTCCTCTGCCGTG | + |
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Preference number: 3 (lower is better) Translates to: NRLILSRASSAA*STRASTCSSAV Trigger: CACGGCAGAGGAGCATGTGCTAGCCCTGGTAGAGCACGCAGCTGATGAGGCTCGGGACAGGATTAACCGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR TCA 72 bp | ACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTaGCGGTACAGACAAGCCAGCATCTTCCTCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TPFGATGPLLQT*RYRQASIFLRL Trigger: CAGCCTGAGGAAGATGCTGGCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR GCA 72 bp | TTGCACTGGGACAACCTCGGGAACAGGTTCCTCAGCTaGTGGGTCTTCACTGCCCAAGAGAGCTGCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LHWDNLGNRFLS*WVFTAQESCFA Trigger: AGCAAAGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 72 bp | ACAGGGTGTGTCTCCTCCATCAGCATCAGGCTCAGGTaGGTTCACCACGCTGTAGAGCAGACTTCCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: TGCVSSISIRLR*VHHAVEQTSIS Trigger: GGAGATGGAAGTCTGCTCTACAGCGTGGTGAACGCACCTGAGCCTGATGCTGATGGAGGAGACACACCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 72 bp | TTCCTCAGCTGCTGGGTCTTCACTGCCCAAGAGAGCTaGTTTGCTCATCATCTTAAAGCCCGCGTGCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: FLSCWVFTAQES*FAHHLKARVQD Trigger: ATCCTGCACGCGGGCTTTAAGATGATGAGCAAAGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR CCA 72 bp | TCCGTTGACATTCTATTGCCACTGCTCAGAGCTTATTaGACACCATTCGGTGCTACTGGGCCTCTGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: SVDILLPLLRAY*TPFGATGPLLQ Trigger: CTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGAGCAGTGGCAATAGAATGTCAACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR TCA 72 bp | CAAAGCTCCTGTAGAATGACTGTGTGCACATCATCATaGACAGGCTTGGCTGCTGGTGCTCAGGAGACACAG | + |
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Preference number: 3 (lower is better) Translates to: QSSCRMTVCTSS*TGLAAGAQETQ Trigger: CTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACACAGTCATTCTACAGGAGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR GCA 72 bp | TGTGTGCACATCATCATGAACAGGCTTGGCTGCTGGTaGTCAGGAGACACAGAGTTGAGCCATCTGATTGCA | + |
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Preference number: 3 (lower is better) Translates to: CVHIIMNRLGCW*SGDTELSHLIA Trigger: TGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR GCA 72 bp | AATGACTGTGTGCACATCATCATGAACAGGCTTGGCTaGTGGTGCTCAGGAGACACAGAGTTGAGCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: NDCVHIIMNRLG*WCSGDTELSHL Trigger: CAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACACAGTCATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR CCA 72 bp | GACTGTGTGCACATCATCATGAACAGGCTTGGCTGCTaGTGCTCAGGAGACACAGAGTTGAGCCATCTGATT | + |
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Preference number: 3 (lower is better) Translates to: DCVHIIMNRLGC*CSGDTELSHLI Trigger: AATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACACAGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGGTGTGTCTCCTCCATCAGCATCAGGCTCAGGTGCGTTCACCACGCTGTAGGCTTTTTGGATTTCTaGGTAGTTTCTACTTGCACT | + |
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Preference number: 3 (lower is better) Translates to: TGCVSSISIRLRCVHHAVGFLDF*VVSTCT Trigger: AGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCC...TACAGCGTGGTGAACGCACCTGAGCCTGATGCTGATGGAGGAGACACACCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR TCA 72 bp | AGAACTGCAGGAAGGCTGTGCAAAGCTCCTGTAGAATaGCTGTGTGCACATCATCATGAACAGGCTTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RTAGRLCKAPVE*LCAHHHEQAWL Trigger: CAGCCAAGCCTGTTCATGATGATGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR TCA 72 bp | CAATGTTGTAAAACCTGGGAGCAACTTGCTAGACAGTaGACTCAGGTCCACAGGGTGTGTCTCCTCCATCAG | + |
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Preference number: 3 (lower is better) Translates to: QCCKTWEQLARQ*TQVHRVCLLHQ Trigger: CTGATGGAGGAGACACACCCTGTGGACCTGAGTTCACTGTCTAGCAAGTTGCTCCCAGGTTTTACAACATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| 3UTR GCA 72 bp | CTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTaGAATCCGTTGACATTCTATTGCCACTGCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LVLRRHRVEPSD*NPLTFYCHCSE Trigger: CTCTGAGCAGTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR GCA 72 bp | TATTTGTCAGGGAGACAACTCCATCCTCTGGCTCAGTaGCCAAATAGGAAACAGAAGGAACCCTCTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YLSGRQLHPLAQ*PNRKQKEPSEG Trigger: GCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAGAGGATGGAGTTGTCTCCCTGACAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| 3UTR TCA 72 bp | GGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTaGCATTCTATTGCCACTGCTCAGAGCTTATTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GDTELSHLIAIR*HSIATAQSLLD Trigger: GTCCAATAAGCTCTGAGCAGTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGACTGCTCAGAGCTTATaGGACACCATTCGGTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TSFILHSKRWGGSLFVRETAQSL*DTIRCY Trigger: GTAGCACCGAATGGTGTCCAATAAGCTCTGAGCAGT...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGTCCGTTGACATTCTATaGCCACTGCTCAGAGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: TSFILHSKRWGGSLFVRESVDIL*PLLRAY Trigger: ATAAGCTCTGAGCAGTGGCAATAGAATGTCAACGGA...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | GACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAGACAAGCCATGCTCCTCTGCCGTaGTGTCTGTCAGGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTIRCYWASAADVTVQTSHAPLP*CLSGCR Trigger: CCTGCAGCCTGACAGACAGCACGGCAGAGGAGCATG...GCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCTTTGAGAACTGCAGGCACTTCCTCCCACCTTaGGCACCAGCTTCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKEPSEGLVCRLPFENCRHFLPP*APASEA Trigger: AGCCTCTGAAGCTGGTGCTCAAGGTGGGAGGAAGTG...CCTGCAGTTCTCAAAGGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCTTTGAGAACTGCAGGCTTCCTGGAGGAGGATaGTCCCTCTCAGAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKEPSEGLVCRLPFENCRLPGGG*SLSEAV Trigger: CACTGCCTCTGAGAGGGAGCATCCTCCTCCAGGAAG...CCTGCAGTTCTCAAAGGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | GACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAGACAAGCGATCGTCGTAGTAGCTaGAGTCGTGGCCAGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTIRCYWASAADVTVQTSDRRSS*SRGQIL Trigger: CAGGATCTGGCCACGACTCCAGCTACTACGACGATC...GCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCTTTGAGAACTGCAGGGCGAGAAGGACTTCCTaGAGGAGGATGCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKEPSEGLVCRLPFENCRARRTS*RRMLPL Trigger: GAGAGGGAGCATCCTCCTCCAGGAAGTCCTTCTCGC...CCTGCAGTTCTCAAAGGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACACACTTCCTCCCACCTTaGGCACCAGCTTCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTHFLPP*APASEA Trigger: AGCCTCTGAAGCTGGTGCTCAAGGTGGGAGGAAGTG...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCATCAGCCTCCCCCTCTaGGTCGCAGTGTTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPISLPL*VAVFLL Trigger: GAGAAGGAACACTGCGACTCAGAGGGGGAGGCTGAT...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACCTTTCCCGAGAGAGCTaGGCATGGACACATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SELIGHHSVLLGLCCRRDLSRES*AWTHPG Trigger: CCCTGGATGTGTCCATGCTCAGCTCTCTCGGGAAAG...GTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCCATGCTCCTCTGCCGTaGTGTCTGTCAGGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQCPNRKQKEPSEGLVCHAPLP*CLSGCR Trigger: CCTGCAGCCTGACAGACAGCACGGCAGAGGAGCATG...GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CATCCTCTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTATCTCACTGGTCGGTCTaGGGGTGGCTCCACCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPLAQCPNRKQKEPSEGLSHWSV*GWLHLH Trigger: GTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGA...TAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAGAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | GACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAGACAAGCAGTCCTGCAGGAGCCTaGCTGTCTCATCCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DTIRCYWASAADVTVQTSSPAGA*LSHPSS Trigger: TGAACTTGGATGAGACAGCCAGGCTCCTGCAGGACT...GCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTAGCGAGAAGGACTTCCTaGAGGAGGATGCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLDTIRCYWASAADVTVARRTS*RRMLPL Trigger: GAGAGGGAGCATCCTCCTCCAGGAAGTCCTTCTCGC...TACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACATTCCTGCAGGCTCAGTaGACACTGCACACCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTFLQAQ*TLHTSL Trigger: GAGACTGGTGTGCAGTGTGCACTGAGCCTGCAGGAA...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCTTCCTGCAGGCTCAGTaGACACTGCACACCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPFLQAQ*TLHTSL Trigger: GAGACTGGTGTGCAGTGTGCACTGAGCCTGCAGGAA...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAGCTTCGTGTAAGTCCTaGAGGAGCCTGGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTASCKS*RSLAVS Trigger: TGAGACAGCCAGGCTCCTGCAGGACTTACACGAAGC...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACACTGCTGGGTCTTCACTaGCCAAGAGAGCTGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTLLGLH*PRELLC Trigger: GCAAAGCAGCTCTCTTGGGCAGTGAAGACCCAGCAG...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCGATCGTCGTAGTAGCTaGAGTCGTGGCCAGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPDRRSS*SRGQIL Trigger: CAGGATCTGGCCACGACTCCAGCTACTACGACGATC...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGAGTCCTGCAGGAGCCTaGCTGTCTCATCCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRAYWTPFGATGPLLQTSPAGA*LSHPSS Trigger: TGAACTTGGATGAGACAGCCAGGCTCCTGCAGGACT...CGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCCTGCTGGGTCTTCACTaGCCAAGAGAGCTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAQCPNRKQKEPSEGLVCLLGLH*PRELPV Trigger: AACAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAG...GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099384.4 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCTGCTGTCTGTCAGGCTaGAGGCATTCCCTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAQCPNRKQKEPSEGLVCCCLSG*RHSLQA Trigger: AGCCTGAAGGGAATGCCTGCAGCCTGACAGACAGCA...GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCATGCTGTCTGTCAGGCTaGAGGCATTCCCTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRLGCWCSGDTELSHLIACCLSG*RHSLQA Trigger: AGCCTGAAGGGAATGCCTGCAGCCTGACAGACAGCA...TGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCACATCATCATGAACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTCTTCCTGGAGGAGGATaGTCCCTCTCAGAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CAHHHEQAWLLVLRRHRVLPGGG*SLSEAV Trigger: CACTGCCTCTGAGAGGGAGCATCCTCCTCCAGGAAG...AACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCACATCTGCAGGTCTCATaGGGATGCTCCTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRLGCWCSGDTELSHLIAHLQVS*GCSSSA Trigger: AGCAGAGGAGGAGCATCCCCATGAGACCTGCAGATG...TGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTAACCACTCTCTCCCAGTaGATCCCCAACCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLDTIRCYWASAADVTVTTLSQ*IPNLHL Trigger: GAGATGAAGGTTGGGGATCCACTGGGAGAGAGTGGT...TACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| 3UTR CAA 72 bp | TCAGCTGCTGGGTCTTCACTGCCCAAGAGAGCTGCTTaGCTCATCATCTTAAAGCCCGCGTGCAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAAGSSLPKRAA*LIILKPACRIF Trigger: GAAGATCCTGCACGCGGGCTTTAAGATGATGAGCAAAGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
||
| 3UTR CAA 72 bp | AGACTTCCATCTCCAAGCTTCTTCAGGTACCCCATCTaGCCACCCGGGAGAAACCGGTTAATCCTGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLPSPSFFRYPI*PPGRNRLILSR Trigger: TCGGGACAGGATTAACCGGTTTCTCCCGGGTGGCAAGATGGGGTACCTGAAGAAGCTTGGAGATGGAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
||
| CDS-3UTR TCA 90 bp | GACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAGACAAGCAAGATCATCCTTGAGTaGTCACCACCTGTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTIRCYWASAADVTVQTSKIILE*SPPVIW Trigger: CCAAATCACAGGTGGTGATCACTCAAGGATGATCTT...GCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGGTAGTACACGGTGTCTaGTCTATTGTACGTCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRAYWTPFGATGPLLQTVVHGV*SIVRHR Trigger: GCGATGACGTACAATAGACCAGACACCGTGTACTAC...CGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAAGAGTTGTTCTGCATTaGAAGTGCAGTGCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTRVVLH*KCSAGT Trigger: AGTGCCAGCACTGCACTTTCAATGCAGAACAACTCT...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTAACTGTTTCATTGACATaGAGTCCAGAACAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLDTIRCYWASAADVTVTVSLT*SPEQGH Trigger: GTGGCCCTGTTCTGGACTTCATGTCAATGAAACAGT...TACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACACTGCCCAAGAGAGCTaGCTGTTTGCTCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SELIGHHSVLLGLCCRRDTAQES*LFAHHL Trigger: AAGATGATGAGCAAACAGGCAGCTCTCTTGGGCAGT...GTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099384.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTATTGGTAGTTTCTACTTaGACTGGGACAACCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLDTIRCYWASAADVTVLVVST*TGTTSG Trigger: TCCCGAGGTTGTCCCAGTGCAAGTAGAAACTACCAA...TACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCGCTTCGTGTAAGTCCTaGAGGAGCCTGGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLRRHRVEPSDCNPLTFASCKS*RSLAVS Trigger: TGAGACAGCCAGGCTCCTGCAGGACTTACACGAAGC...GAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACACAGAGGCTTCTCCAGTaGCGTGTCTGTATAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTQRLLQ*RVCIIF Trigger: GAAGATTATACAGACACGCCACTGGAGAAGCCTCTG...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTATTGCCACTGGTCGGTCTGGGGGTaGCTCCACCTCCACCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRHRVEPSDCNPLTFYCHWSVWG*LHLHLL Trigger: AAGAAGGTGGAGGTGGAGCCACCCCCAGACCGACCA...GTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGTTTCTACTTGCACTaGGACAACCTCGGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQCPNRKQKEPSEGLVCSFYLH*DNLGNR Trigger: CCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACT...GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCCATCTGCAGGTCTCATaGGGATGCTCCTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLRRHRVEPSDCNPLTFHLQVS*GCSSSA Trigger: AGCAGAGGAGGAGCATCCCCATGAGACCTGCAGATG...GAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGAGGAGCTGCAGGTTCTaGAGACTGAAGGAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LLRAYWTPFGATGPLLQTRSCRF*RLKEFI Trigger: TATGAATTCCTTCAGTCTCCAGAACCTGCAGCTCCT...CGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTATTGCCACATCAGCCTCCCCCTCTaGGTCGCAGTGTTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRHRVEPSDCNPLTFYCHISLPL*VAVFLL Trigger: GAGAAGGAACACTGCGACTCAGAGGGGGAGGCTGAT...GTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACAAGATCATCCTTGAGTaGTCACCACCTGTGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SELIGHHSVLLGLCCRRDKIILE*SPPVIW Trigger: CCAAATCACAGGTGGTGATCACTCAAGGATGATCTT...GTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTATTGCCACCTTTCCCGAGAGAGCTaGGCATGGACACATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRHRVEPSDCNPLTFYCHLSRES*AWTHPG Trigger: CCCTGGATGTGTCCATGCTCAGCTCTCTCGGGAAAG...GTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGAAGTGGCTATCTTCATaGTCCAGCTCCTTCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LLRAYWTPFGATGPLLQTKWLSS*SSSFFT Trigger: AGTAAAGAAGGAGCTGGACCATGAAGATAGCCACTT...CGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTAAGGAGCTGCAGGTTCTaGAGACTGAAGGAATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLLDTIRCYWASAADVTVRSCRF*RLKEFI Trigger: TATGAATTCCTTCAGTCTCCAGAACCTGCAGCTCCT...TACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACAGGATACTGTTTCATTaGCATGAAGTCCAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SELIGHHSVLLGLCCRRDRILFH*HEVQNR Trigger: CCTGTTCTGGACTTCATGTCAATGAAACAGTATCCT...GTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAAGGATACTGTTTCATTaGCATGAAGTCCAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTRILFH*HEVQNR Trigger: CCTGTTCTGGACTTCATGTCAATGAAACAGTATCCT...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCAACACAGAGTTGTTCTaGATTGAAAGTGCAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPNTELF*IESAVL Trigger: CAGCACTGCACTTTCAATGCAGAACAACTCTGTGTT...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCCATCTACCATCTTCTTaGTATAGCTTCCAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPHLPSS*YSFQHP Trigger: AGGATGCTGGAAGCTATAGCAAGAAGATGGTAGATG...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACCATCTACCATCTTCTTaGTATAGCTTCCAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SELIGHHSVLLGLCCRRDHLPSS*YSFQHP Trigger: AGGATGCTGGAAGCTATAGCAAGAAGATGGTAGATG...GTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CATCCTCTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTACAGAGGCTTCTCCAGTaGCGTGTCTGTATAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLAQCPNRKQKEPSEGLQRLLQ*RVCIIF Trigger: GAAGATTATACAGACACGCCACTGGAGAAGCCTCTG...TAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCCGTGCAGGATCTTCTTaGCTAATTTGTAGTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQCPNRKQKEPSEGLVCRAGSS*LICSTR Trigger: CCGTGTACTACAAATTAGCCAAGAAGATCCTGCACG...GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | AACTGCAGGAAGGCTGTGCAAAGCTCCTGTAGAATGACTGTGTGCACATCATCAACCACTCTCTCCCAGTaGATCCCCAACCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NCRKAVQSSCRMTVCTSSTTLSQ*IPNLHL Trigger: GAGATGAAGGTTGGGGATCCACTGGGAGAGAGTGGT...TGATGATGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCCTGGAAGATCATCCTTaGGTGATCACCACCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLRRHRVEPSDCNPLTFLEDHP*VITTCD Trigger: ATCACAGGTGGTGATCACTCAAGGATGATCTTCCAG...GAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCGTAGTACACGGTGTCTaGTCTATTGTACGTCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLRRHRVEPSDCNPLTFVVHGV*SIVRHR Trigger: GCGATGACGTACAATAGACCAGACACCGTGTACTAC...GAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | AACTGCAGGAAGGCTGTGCAAAGCTCCTGTAGAATGACTGTGTGCACATCATCAAGTTTCTACTTGCACTaGGACAACCTCGGGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NCRKAVQSSCRMTVCTSSSFYLH*DNLGNR Trigger: CCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACT...TGATGATGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | CATCCTCTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTATCATCCAAGTTCAAGTaGCTATCTTCATGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPLAQCPNRKQKEPSEGLSSKFK*LSSWSS Trigger: GCTGGACCATGAAGATAGCCACTTGAACTTGGATGA...TAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAGAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| 3UTR CAA 72 bp | TCTACTCGGCTTTTTGGATTTCTTGGTAGTTTCTACTaGCACTGGGACAACCTCGGGAACAGGTTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STRLFGFLGSFY*HWDNLGNRFLS Trigger: GCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCCGAGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
||
| CDS-3UTR GCA 90 bp | CATCCTCTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAAACACAGAGTTGTTCTaGATTGAAAGTGCAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPLAQCPNRKQKEPSEGLNTELF*IESAVL Trigger: CAGCACTGCACTTTCAATGCAGAACAACTCTGTGTT...TAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAGAGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGTCTCACTGGTCGGTCTaGGGGTGGCTCCACCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSFILHSKRWGGSLFVRESHWSV*GWLHLH Trigger: GTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGA...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCACATCATCATGAACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTAAGTGGCTATCTTCATaGTCCAGCTCCTTCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: CAHHHEQAWLLVLRRHRVKWLSS*SSSFFT Trigger: AGTAAAGAAGGAGCTGGACCATGAAGATAGCCACTT...AACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | AACTGCAGGAAGGCTGTGCAAAGCTCCTGTAGAATGACTGTGTGCACATCATCAATCTTAAAGCCCGCGTaGAGGATCTTCTTGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NCRKAVQSSCRMTVCTSSILKPA*RIFLAN Trigger: ATTAGCCAAGAAGATCCTGCACGCGGGCTTTAAGAT...TGATGATGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTATTGCCACATCTTAAAGCCCGCGTaGAGGATCTTCTTGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRHRVEPSDCNPLTFYCHILKPA*RIFLAN Trigger: ATTAGCCAAGAAGATCCTGCACGCGGGCTTTAAGAT...GTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR CAA 72 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTaGACATTCTATTGCCACTGCTCAGAGCTTATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRHRVEPSDCNP*TFYCHCSELIG Trigger: TCCAATAAGCTCTGAGCAGTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| 3UTR CAA 72 bp | TCAAACATGCAGCTGATAACTTCTCTACTCGGCTTTTaGGATTTCTTGGTAGTTTCTACTTGCACTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SNMQLITSLLGF*DFLVVSTCTGT Trigger: TGTCCCAGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| CDS-3UTR TCA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGCTGGAAGATCATCCTTaGGTGATCACCACCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSFILHSKRWGGSLFVRELEDHP*VITTCD Trigger: ATCACAGGTGGTGATCACTCAAGGATGATCTTCCAG...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CCA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGCGTGCAGGATCTTCTTaGCTAATTTGTAGTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFILHSKRWGGSLFVRERAGSS*LICSTR Trigger: CCGTGTACTACAAATTAGCCAAGAAGATCCTGCACG...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CCA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGTCATCCAAGTTCAAGTaGCTATCTTCATGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSFILHSKRWGGSLFVRESSKFK*LSSWSS Trigger: GCTGGACCATGAAGATAGCCACTTGAACTTGGATGA...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| 3UTR CAA 72 bp | GGTCTATTGTACGTCATCGCATTATCACACATTAATTaGAAATCTGCCCAAAATAGTCCTCTGCAAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLYVIALSHIN*KSAQNSPLQTP Trigger: AGGTGTTTGCAGAGGACTATTTTGGGCAGATTTCAAATTAATGTGTGATAATGCGATGACGTACAATAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| CDS CCA 90 bp | CTCAGCTGGCTGTGTTCGGCAGGCTCTCACTGGTCGGTCTGGGGGTaGCTCCACCTCCACCTTCTTTCCAGGGTCGAAAGCATCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSWLCSAGSHWSVWG*LHLHLLSRVESISL Trigger: GAGGCTGATGCTTTCGACCCTGGAAAGAAGGTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGAGCCTGCCGAACACAGCCAGCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS CCA 90 bp | AGGTGTGCTCTCGTTCTCAGCTGGCTGTGTTCGGCAGGCTCTCACTaGTCGGTCTGGGGGTGGCTCCACCTCCACCTTCTTTCCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RCALVLSWLCSAGSH*SVWGWLHLHLLSRV Trigger: GACCCTGGAAAGAAGGTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGAGCCTGCCGAACACAGCCAGCTGAGAACGAGAGCACACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS CCA 90 bp | CTCGTTCTCAGCTGGCTGTGTTCGGCAGGCTCTCACTGGTCGGTCTaGGGGTGGCTCCACCTCCACCTTCTTTCCAGGGTCGAAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVLSWLCSAGSHWSV*GWLHLHLLSRVESI Trigger: GATGCTTTCGACCCTGGAAAGAAGGTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGAGCCTGCCGAACACAGCCAGCTGAGAACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS CCA 90 bp | GAAGTGTTCCAGAAGCCTCTGGATAGGTGTGCTCTCGTTCTCAGCTaGCTGTGTTCGGCAGGCTCTCACTGGTCGGTCTGGGGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVFQKPLDRCALVLS*LCSAGSHWSVWGWL Trigger: GAGCCACCCCCAGACCGACCAGTGAGAGCCTGCCGAACACAGCCAGCTGAGAACGAGAGCACACCTATCCAGAGGCTTCTGGAACACTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS CCA 90 bp | GGCGACATCCGGCTGCTCCCCAACACTAAGGCGAGAAGGACTTCCTaGAGGAGGATGCTCCCTCTCAGAGGCAGTGGACAGAGAGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDIRLLPNTKARRTS*RRMLPLRGSGQRAK Trigger: CTTAGCTCTCTGTCCACTGCCTCTGAGAGGGAGCATCCTCCTCCAGGAAGTCCTTCTCGCCTTAGTGTTGGGGAGCAGCCGGATGTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | GACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAGACAAGCGACAGAGAGCTAAGGTaGGAGGATGGCCGAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DTIRCYWASAADVTVQTSDRELR*EDGREP Trigger: AGGCTCTCGGCCATCCTCCAACCTTAGCTCTCTGTC...GCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS GCA 90 bp | GGCTGCTCCCCAACACTAAGGCGAGAAGGACTTCCTGGAGGAGGATaGTCCCTCTCAGAGGCAGTGGACAGAGAGCTAAGGTTGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GCSPTLRREGLPGGG*SLSEAVDRELRLED Trigger: ATCCTCCAACCTTAGCTCTCTGTCCACTGCCTCTGAGAGGGAGCATCCTCCTCCAGGAAGTCCTTCTCGCCTTAGTGTTGGGGAGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS CCA 90 bp | CTCTGTGTCTCTCCCGTTCGTGGTCTGAGCGATCGTCGTAGTAGCTaGAGTCGTGGCCAGATCCTGAGAGCTCTGTCACTTCACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCVSPVRGLSDRRSS*SRGQILRALSLHFL Trigger: GAGGAAGTGAAGTGACAGAGCTCTCAGGATCTGGCCACGACTCCAGCTACTACGACGATCGCTCAGACCACGAACGGGAGAGACACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 |
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| CDS GCA 90 bp | CAGGTCCACAGGGTGTGTCTCCTCCTCATCAGCATCAGGCTCAGGTaGGTTCACCACGCTGTAGAGCAGACTTCCATCTCCAAGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVHRVCLLLISIRLR*VHHAVEQTSISKLL Trigger: AAGAAGCTTGGAGATGGAAGTCTGCTCTACAGCGTGGTGAACGCACCTGAGCCTGATGCTGATGAGGAGGAGACACACCCTGTGGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000223525.2 |
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| CDS GCA 90 bp | GATGGCCGAGAGCCTCCTCGCTCTGCTTGTGCTTCGTGTAAGTCCTaGAGGAGCCTGGCTGTCTCATCCAAGTTCAAGTGGCTATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DGREPPRSACASCKS*RSLAVSSKFKWLSS Trigger: TGAAGATAGCCACTTGAACTTGGATGAGACAGCCAGGCTCCTGCAGGACTTACACGAAGCACAAGCAGAGCGAGGAGGCTCTCGGCCATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS TCA 90 bp | CACCTCCACCTTCTTTCCAGGGTCGAAAGCATCAGCCTCCCCCTCTaGGTCGCAGTGTTCCTTCTCCCGTTTCCGTTTCTTCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLHLLSRVESISLPL*VAVFLLPFPFLLFL Trigger: AAGGAAGAGAAGAAACGGAAACGGGAGAAGGAACACTGCGACTCAGAGGGGGAGGCTGATGCTTTCGACCCTGGAAAGAAGGTGGAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS GCA 90 bp | AGTTTCTACTTGCACTGGGACAACCTCGGGAACAGGTTCCTCAGCTaGTGGGTCTTCACTGCCCAAGAGAGCTGCCTGCTGAGAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SFYLHWDNLGNRFLS*WVFTAQESCLLREI Trigger: GATTTCTCTCAGCAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223525.2 |
||
| CDS CCA 90 bp | AGCCTCCTCGCTCTGCTTGTGCTTCGTGTAAGTCCTGCAGGAGCCTaGCTGTCTCATCCAAGTTCAAGTGGCTATCTTCATGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLALLVLRVSPAGA*LSHPSSSGYLHGPA Trigger: AGCTGGACCATGAAGATAGCCACTTGAACTTGGATGAGACAGCCAGGCTCCTGCAGGACTTACACGAAGCACAAGCAGAGCGAGGAGGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
||
| CDS TCA 90 bp | GGTTCCTCAGCTGCTGGGTCTTCACTGCCCAAGAGAGCTGCCTGCTaGGAGAAATCCATGTCCTGCATAAACGACATGCTGCGCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSAAGSSLPKRAAC*EKSMSCINDMLRFK Trigger: TTTGAAGCGCAGCATGTCGTTTATGCAGGACATGGATTTCTCTCAGCAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223525.2 |
||
| CDS GCA 90 bp | AGTTTCTACTTGCACTGGGACAACCTCGGGAACAGGTTCCTCAGCTaGTGGGTCTTCACTGCCCAAGAGAGCTGCCTGTTTGCTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFYLHWDNLGNRFLS*WVFTAQESCLFAHH Trigger: ATGATGAGCAAACAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAAGTAGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099384.4 |
||
| CDS-3UTR CAA 90 bp | TCAGAGCTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACCCCAAGAGAGCTGCTTaGCTCATCATCTTAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SELIGHHSVLLGLCCRRDPKRAA*LIILKP Trigger: GGGCTTTAAGATGATGAGCAAAGCAGCTCTCTTGGG...GTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAGCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222399.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCACATCATCATGAACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTGAGCGCCATTCCGCCTaGTGCTTCTTGTGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CAHHHEQAWLLVLRRHRVERHSA*CFLCFL Trigger: CAAAAAGCACAAGAAGCACAAGGCGGAATGGCGCTC...AACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | CTTATTGGACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAAAGAGAGCTGCCTGTTaGCTCATCATCTTAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LIGHHSVLLGLCCRRDGTKRAAC*LIILKP Trigger: GGGCTTTAAGATGATGAGCAAACAGGCAGCTCTCTT...TGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTCCAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099384.4 |
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| CDS-3UTR CAA 90 bp | CTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCCAGAGTTGTTCTGCATaGAAAGTGCAGTGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAQCPNRKQKEPSEGLVCQSCSA*KVQCWH Trigger: GTGCCAGCACTGCACTTTCAATGCAGAACAACTCTG...GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS CCA 90 bp | TCGTGTAAGTCCTGCAGGAGCCTGGCTGTCTCATCCAAGTTCAAGTaGCTATCTTCATGGTCCAGCTCCTTCTTTACTTTCCCGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCKSCRSLAVSSKFK*LSSWSSSFFTFPRE Trigger: CTCTCTCGGGAAAGTAAAGAAGGAGCTGGACCATGAAGATAGCCACTTGAACTTGGATGAGACAGCCAGGCTCCTGCAGGACTTACACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | GACACCATTCGGTGCTACTGGGCCTCTGCTGCAGACGTGACGGTACAGACAAGCGGCTTTTTGGATTTCTaGGTAGTTTCTACTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: DTIRCYWASAADVTVQTSGFLDF*VVSTCT Trigger: AGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCC...GCTTGTCTGTACCGTCACGTCTGCAGCAGAGGCCCAGTAGCACCGAATGGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | TGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCAGGCTCCCCTCCCCAAACACAGAGTaGTTCTGCATTGAAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPNRKQKEPSEGLVCRLPSPNTE*FCIESA Trigger: TGCACTTTCAATGCAGAACAACTCTGTGTTTGGGGA...GGGGAGCCTGCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | AACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCATCCCCAAACACAGAGTaGTTCTGCATTGAAAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: NRLGCWCSGDTELSHLIASPNTE*FCIESA Trigger: TGCACTTTCAATGCAGAACAACTCTGTGTTTGGGGA...TGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | AACTGCAGGAAGGCTGTGCAAAGCTCCTGTAGAATGACTGTGTGCACATCATCAATCACCACCTGTGATTaGGTCCAGGAGGTCATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NCRKAVQSSCRMTVCTSSITTCD*VQEVIY Trigger: GTAGATGACCTCCTGGACCAAATCACAGGTGGTGAT...TGATGATGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | AACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCATCATTAGCTACAATCTaGTCTTTCATCGTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NRLGCWCSGDTELSHLIASLATI*SFIVPK Trigger: CTTTGGCACGATGAAAGACAAGATTGTAGCTAATGA...TGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTCAGTGCCCAAATAGGAAACAGAAGGAACCCTCTGAAGGCCTAGTCTGCTCATTAGCTACAATCTaGTCTTTCATCGTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAQCPNRKQKEPSEGLVCSLATI*SFIVPK Trigger: CTTTGGCACGATGAAAGACAAGATTGTAGCTAATGA...GCAGACTAGGCCTTCAGAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | AGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTATTGCCACATCACCACCTGTGATTaGGTCCAGGAGGTCATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RRHRVEPSDCNPLTFYCHITTCD*VQEVIY Trigger: GTAGATGACCTCCTGGACCAAATCACAGGTGGTGAT...GTGGCAATAGAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | TTCACTGCCCAAGAGAGCTGCTTTGCTCATCATCTTAAAGCCCGCGTGCAGGATTCATTAGCTACAATCTaGTCTTTCATCGTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTAQESCFAHHLKARVQDSLATI*SFIVPK Trigger: CTTTGGCACGATGAAAGACAAGATTGTAGCTAATGA...ATCCTGCACGCGGGCTTTAAGATGATGAGCAAAGCAGCTCTCTTGGGCAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223238.2 |
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| CDS-3UTR CAA 90 bp | TGTGCACATCATCATGAACAGGCTTGGCTGCTGGTGCTCAGGAGACACAGAGTTTCTCTACTCGGCTTTTaGGATTTCTTGGTAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CAHHHEQAWLLVLRRHRVSLLGF*DFLVVS Trigger: AGAAACTACCAAGAAATCCAAAAAGCCGAGTAGAGA...AACTCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | CTGGTGCTCAGGAGACACAGAGTTGAGCCATCTGATTGCAATCCGTTGACATTCTCTCTACTCGGCTTTTaGGATTTCTTGGTAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVLRRHRVEPSDCNPLTFSLLGF*DFLVVS Trigger: AGAAACTACCAAGAAATCCAAAAAGCCGAGTAGAGA...GAATGTCAACGGATTGCAATCAGATGGCTCAACTCTGTGTCTCCTGAGCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | AACTGCAGGAAGGCTGTGCAAAGCTCCTGTAGAATGACTGTGTGCACATCATCAGGCTTTTTGGATTTCTaGGTAGTTTCTACTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NCRKAVQSSCRMTVCTSSGFLDF*VVSTCT Trigger: AGTGCAAGTAGAAACTACCAAGAAATCCAAAAAGCC...TGATGATGTGCACACAGTCATTCTACAGGAGCTTTGCACAGCCTTCCTGCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGGAGCGCCATTCCGCCTaGTGCTTCTTGTGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSFILHSKRWGGSLFVREERHSA*CFLCFL Trigger: CAAAAAGCACAAGAAGCACAAGGCGGAATGGCGCTC...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS-3UTR CAA 90 bp | ACTTCATTTATACTTCATTCTAAAAGGTGGGGTGGTTCATTATTTGTCAGGGAGCAGAGTTGTTCTGCATaGAAAGTGCAGTGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TSFILHSKRWGGSLFVREQSCSA*KVQCWH Trigger: GTGCCAGCACTGCACTTTCAATGCAGAACAACTCTG...CTCCCTGACAAATAATGAACCACCCCACCTTTTAGAATGAAGTATAAATGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS CCA 72 bp | AGCTGGCTGTGTTCGGCAGGCTCTCACTGGTCGGTCTaGGGGTGGCTCCACCTCCACCTTCTTTCCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SWLCSAGSHWSV*GWLHLHLLSRV Trigger: GACCCTGGAAAGAAGGTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGAGCCTGCCGAACACAGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS CCA 72 bp | CTGTGTTCGGCAGGCTCTCACTGGTCGGTCTGGGGGTaGCTCCACCTCCACCTTCTTTCCAGGGTCGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCSAGSHWSVWG*LHLHLLSRVES Trigger: GCTTTCGACCCTGGAAAGAAGGTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGAGCCTGCCGAACACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS CCA 72 bp | CTCGTTCTCAGCTGGCTGTGTTCGGCAGGCTCTCACTaGTCGGTCTGGGGGTGGCTCCACCTCCACCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVLSWLCSAGSH*SVWGWLHLHLL Trigger: AAGAAGGTGGAGGTGGAGCCACCCCCAGACCGACCAGTGAGAGCCTGCCGAACACAGCCAGCTGAGAACGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS GCA 72 bp | TTGCACTGGGACAACCTCGGGAACAGGTTCCTCAGCTaGTGGGTCTTCACTGCCCAAGAGAGCTGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHWDNLGNRFLS*WVFTAQESCLL Trigger: CAGCAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223525.2 |
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| CDS CCA 72 bp | CTCAGAGGCAGTGGACAGAGAGCTAAGGTTGGAGGATaGCCGAGAGCCTCCTCGCTCTGCTTGTGCTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRGSGQRAKVGG*PRASSLCLCFV Trigger: CACGAAGCACAAGCAGAGCGAGGAGGCTCTCGGCCATCCTCCAACCTTAGCTCTCTGTCCACTGCCTCTGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS TCA 72 bp | GCGATCGTCGTAGTAGCTGGAGTCGTGGCCAGATCCTaGGAGCTCTGTCACTTCACTTCCTCCCACCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AIVVVAGVVARS*ELCHFTSSHLE Trigger: CTCAAGGTGGGAGGAAGTGAAGTGACAGAGCTCTCAGGATCTGGCCACGACTCCAGCTACTACGACGATCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 |
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| CDS GCA 72 bp | TTGCACTGGGACAACCTCGGGAACAGGTTCCTCAGCTaGTGGGTCTTCACTGCCCAAGAGAGCTGCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LHWDNLGNRFLS*WVFTAQESCLF Trigger: AAACAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACCTGTTCCCGAGGTTGTCCCAGTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099384.4 |
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| CDS GCA 72 bp | GAGCCTCCTCGCTCTGCTTGTGCTTCGTGTAAGTCCTaGAGGAGCCTGGCTGTCTCATCCAAGTTCAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: EPPRSACASCKS*RSLAVSSKFKW Trigger: CCACTTGAACTTGGATGAGACAGCCAGGCTCCTGCAGGACTTACACGAAGCACAAGCAGAGCGAGGAGGCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS GCA 72 bp | CCAACACTAAGGCGAGAAGGACTTCCTGGAGGAGGATaGTCCCTCTCAGAGGCAGTGGACAGAGAGCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTLRREGLPGGG*SLSEAVDRELR Trigger: CCTTAGCTCTCTGTCCACTGCCTCTGAGAGGGAGCATCCTCCTCCAGGAAGTCCTTCTCGCCTTAGTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS GCA 72 bp | CCCAGGACCCCAATTCCTTCACGGAAGCCCTCTTTTTaGTGCGGGTCTTCCTGGTGTCAGAGAGGAGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: PRTPIPSRKPSF*CGSSWCQRGGT Trigger: TGTACCTCCTCTCTGACACCAGGAAGACCCGCAGCAAAAAGAGGGCTTCCGTGAAGGAATTGGGGTCCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222749.2 |
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| CDS GCA 72 bp | CCTCGGGAACAGGTTCCTCAGCTGCTGGGTCTTCACTaGCCAAGAGAGCTGCCTGCTGAGAGAAATCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: PREQVPQLLGLH*PRELPAERNPC Trigger: ACATGGATTTCTCTCAGCAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGCTGAGGAACCTGTTCCCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223525.2 |
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| CDS CCA 72 bp | TCTCCCGTTCGTGGTCTGAGCGATCGTCGTAGTAGCTaGAGTCGTGGCCAGATCCTGAGAGCTCTGTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SPVRGLSDRRSS*SRGQILRALSL Trigger: AAGTGACAGAGCTCTCAGGATCTGGCCACGACTCCAGCTACTACGACGATCGCTCAGACCACGAACGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 |
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| CDS CAA 72 bp | ACCCAGGACCCCAATTCCTTCACGGAAGCCCTCTTTTaGCTGCGGGTCTTCCTGGTGTCAGAGAGGAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: TQDPNSFTEALF*LRVFLVSERRY Trigger: GTACCTCCTCTCTGACACCAGGAAGACCCGCAGCAAAAAGAGGGCTTCCGTGAAGGAATTGGGGTCCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222749.2 |
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| CDS GCA 72 bp | ACTCTCTCCCAGTGGATCCCCAACCTTCATCTCATCTaGAGGTCTCATGGGGATGCTCCTCCTCTGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLSQWIPNLHLI*RSHGDAPPLLQ Trigger: CTGAAGCAGAGGAGGAGCATCCCCATGAGACCTGCAGATGAGATGAAGGTTGGGGATCCACTGGGAGAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS CCA 72 bp | CTCTGTAGCTGGCGGAGGAAGTGTTCCAGAAGCCTCTaGATAGGTGTGCTCTCGTTCTCAGCTGGCTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LCSWRRKCSRSL*IGVLSFSAGCV Trigger: AACACAGCCAGCTGAGAACGAGAGCACACCTATCCAGAGGCTTCTGGAACACTTCCTCCGCCAGCTACAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000222749.2 ENSMUST00000223525.2 |
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| CDS TCA 72 bp | GCTGCTGGGTCTTCACTGCCCAAGAGAGCTGCCTGCTaGGAGAAATCCATGTCCTGCATAAACGACATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AAGSSLPKRAAC*EKSMSCINDML Trigger: CAGCATGTCGTTTATGCAGGACATGGATTTCTCTCAGCAGGCAGCTCTCTTGGGCAGTGAAGACCCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223525.2 |
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| CDS TCA 72 bp | GGACACATCCAGGGAGACATCAGGATACTGTTTCATTaGCATGAAGTCCAGAACAGGGCCACCACTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GHIQGDIRILFH*HEVQNRATTLS Trigger: GGAGAGAGTGGTGGCCCTGTTCTGGACTTCATGTCAATGAAACAGTATCCTGATGTCTCCCTGGATGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS TCA 72 bp | CATGGTCCAGCTCCTTCTTTACTTTCCCGAGAGAGCTaGGCATGGACACATCCAGGGAGACATCAGGATACT | + |
|
Preference number: 6 (lower is better) Translates to: HGPAPSLLSRES*AWTHPGRHQDT Trigger: AGTATCCTGATGTCTCCCTGGATGTGTCCATGCTCAGCTCTCTCGGGAAAGTAAAGAAGGAGCTGGACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS CCA 72 bp | GCTCTGCTTGTGCTTCGTGTAAGTCCTGCAGGAGCCTaGCTGTCTCATCCAAGTTCAAGTGGCTATCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ALLVLRVSPAGA*LSHPSSSGYLH Trigger: ATGAAGATAGCCACTTGAACTTGGATGAGACAGCCAGGCTCCTGCAGGACTTACACGAAGCACAAGCAGAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 |
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| CDS TCA 72 bp | ATCTCCATAGGCGGAATACAGAAGCTCCATCTCATCTaGCTTCAGGTCCCCAAACACAGAGTTGTTCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ISIGGIQKLHLI*LQVPKHRVVLH Trigger: ATGCAGAACAACTCTGTGTTTGGGGACCTGAAGTCAGATGAGATGGAGCTTCTGTATTCCGCCTATGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099384.4 ENSMUST00000222399.2 ENSMUST00000223525.2 |
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