Pregenerated sensors for BRD8DC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049357Ensembl transcript IDs: ENSMUST00000056932.9, ENSMUST00000129566.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTTGGAACATCAGCATCAGATCCCGCTGGAATTCAGCCATGGTGTaGATGCGTCCCTTAGACAAATTCCTCTTCAGGGTCGTTAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: FWNISIRSRWNSAMV*MRPLDKFLFRVVKS Trigger: GGACTTAACGACCCTGAAGAGGAATTTGTCTAAGGGACGCATTCACACCATGGCTGAATTCCAGCGGGATCTGATGCTGATGTTCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| 3UTR CCA 90 bp | AGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACCACATTAGCTaGCACTCATTCCAGACTACTCAAGTCCTTCCTTTTATCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: SSRLTKSPFFIHHIS*HSFQTTQVLPFIQP Trigger: TGGCTGGATAAAAGGAAGGACTTGAGTAGTCTGGAATGAGTGCCAGCTAATGTGGTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGAGGGAGGGAAAGTCTTCACATCGTCTCTGGCCAGTCCTAAGAAGAGCCTCAGAACCTGGATCTaGTCCAAGACTTCCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: EREGGKVFTSSLASPKKSLRTWI*SKTSRC Trigger: GCAGCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAG...GCTCTTCTTAGGACTGGCCAGAGACGATGTGAAGACTTTCCCTCCCTCTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGAGGGAGGGAAAGTCTTCACATCGTCTCTGGCCAGTCCTAAGAAGAGCTACATCACGGCATTTTaGAACATCAGCATCAGATCC | + |
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Preference number: 2 (lower is better) Translates to: EREGGKVFTSSLASPKKSYITAF*NISIRS Trigger: GGATCTGATGCTGATGTTCCAAAATGCCGTGATGTA...GCTCTTCTTAGGACTGGCCAGAGACGATGTGAAGACTTTCCCTCCCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTTATCCAGCCAAGTACTCAGAACCTGGATCTGCTCCAAGACTTCCCGCTAGAAGAGCTGTAACTTaGGAAAGAACCAGACTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SFYPAKYSEPGSAPRLPARRAVT*ERTRLV Trigger: TACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCT...AGCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAGTACTTGGCTGGATAAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACATTACTGTCCTTATTTaGAAAGGGAATAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHITVLI*KGNRER Trigger: TCTCTCTCTATTCCCTTTCCAAATAAGGACAGTAAT...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAATTACTGTCCTTATTTaGAAAGGGAATAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SPKKSCNLRKNQTCSSRLITVLI*KGNRER Trigger: TCTCTCTCTATTCCCTTTCCAAATAAGGACAGTAAT...TAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| 3UTR TCA 72 bp | ATCAGCATCAGATCCCGCTGGAATTCAGCCATGGTGTaGATGCGTCCCTTAGACAAATTCCTCTTCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ISIRSRWNSAMV*MRPLDKFLFRV Trigger: GACCCTGAAGAGGAATTTGTCTAAGGGACGCATTCACACCATGGCTGAATTCCAGCGGGATCTGATGCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGAGGGAGGGAAAGTCTTCACATCGTCTCTGGCCAGTCCTAAGAAGAGCAAGAAGAGCTGTAACTaGAGAAAGAACCAGACTTGT | + |
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Preference number: 3 (lower is better) Translates to: EREGGKVFTSSLASPKKSKKSCN*RKNQTC Trigger: ACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTT...GCTCTTCTTAGGACTGGCCAGAGACGATGTGAAGACTTTCCCTCCCTCTCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| 3UTR CCA 72 bp | CTAACAAAGTCCCCTTTCTTCATCCACCACATTAGCTaGCACTCATTCCAGACTACTCAAGTCCTTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LTKSPFFIHHIS*HSFQTTQVLPF Trigger: AAAAGGAAGGACTTGAGTAGTCTGGAATGAGTGCCAGCTAATGTGGTGGATGAAGAAAGGGGACTTTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCACAGCCATGTGGTATATGTGATGATCAGAGTCGTTGTACATCACGGCATTAAGAAGAGCTGTAACTaGAGAAAGAACCAGACTTGT | + |
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Preference number: 3 (lower is better) Translates to: LHSHVVYVMIRVVVHHGIKKSCN*RKNQTC Trigger: ACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTT...AATGCCGTGATGTACAACGACTCTGATCATCACATATACCACATGGCTGTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | GAGAGAGAGGGAGGGAAAGTCTTCACATCGTCTCTGGCCAGTCCTAAGAAGAGCCGGTGTCCTTCCAGCTaGCCACATCAAGATCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: EREGGKVFTSSLASPKKSRCPSS*PHQDPD Trigger: GTCTGGATCTTGATGTGGGCAGCTGGAAGGACACCG...GCTCTTCTTAGGACTGGCCAGAGACGATGTGAAGACTTTCCCTCCCTCTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | GAGAGAGAGGGAGGGAAAGTCTTCACATCGTCTCTGGCCAGTCCTAAGAAGAGCATCAGCCTCAGCCTCTaGATCCTCGGTGTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: EREGGKVFTSSLASPKKSISLSL*ILGVLP Trigger: TGGAAGGACACCGAGGATGCAGAGGCTGAGGCTGAT...GCTCTTCTTAGGACTGGCCAGAGACGATGTGAAGACTTTCCCTCCCTCTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | TCCTTTTATCCAGCCAAGTACTCAGAACCTGGATCTGCTCCAAGACTTCCCGCTTGGAGTCCCAAGAGCTaGGGAGGGACCTGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SFYPAKYSEPGSAPRLPAWSPKS*GGTCSH Trigger: ATGACTGCAGGTCCCTCCTCAGCTCTTGGGACTCCA...AGCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAGTACTTGGCTGGATAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACACCAGGGGAGCTTCCTaGACTCGGATGCCTTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHTRGAS*TRMPSP Trigger: GGGGGAAGGCATCCGAGTTCAGGAAGCTCCCCTGGT...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTACCAGGGGAGCTTCCTaGACTCGGATGCCTTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSTRGAS*TRMPSP Trigger: GGGGGAAGGCATCCGAGTTCAGGAAGCTCCCCTGGT...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACTGGAGTCCCAAGAGCTaGGGAGGGACCTGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHWSPKS*GGTCSH Trigger: ATGACTGCAGGTCCCTCCTCAGCTCTTGGGACTCCA...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | CATCTCCACAGCCATGTGGTATATGTGATGATCAGAGTCGTTGTACATCACGGCGGGCTGCTAAACCTGTaGCTGGCAATCATCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HLHSHVVYVMIRVVVHHGGLLNL*LAIIFQ Trigger: CTGGAAGATGATTGCCAGTCACAGGTTTAGCAGCCC...GCCGTGATGTACAACGACTCTGATCATCACATATACCACATGGCTGTGGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACGCAGTTCCTGGGGTGTaGCTTGTTCTGCCTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHAVPGV*LVLPLP Trigger: GGGAAGAGGCAGAACAAGGCACACCCCAGGAACTGC...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTCTGGGCTGCTTTCCTTaGGCTCATCAGCCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSLGCFP*AHQPQP Trigger: AGGCTGAGGCTGATGAGCCCAAGGAAAGCAGCCCAG...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACTCTTTTGAGTCTTGCTaGGCCTCCCCCTCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHSFESC*ASPSES Trigger: GCTCTCTGAGGGGGAGGCTCAGCAAGACTCAAAAGA...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACCGTGTCTTCTCCGTCTaGAGCAGACCCTTCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHRVFSV*SRPFTL Trigger: CAAGGTGAAGGGTCTGCTTCAGACGGAGAAGACACG...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTCGTGTCTTCTCCGTCTaGAGCAGACCCTTCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSRVFSV*SRPFTL Trigger: CAAGGTGAAGGGTCTGCTTCAGACGGAGAAGACACG...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTTTATCCAGCCAAGTACTCAGAACCTGGATCTGCTCCAAGACTTCCCGCGGGACCTGCAGTCATTaGTCAACTCAGAGTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: FLLSSQVLRTWICSKTSRGTCSH*STQSHH Trigger: ATGATGACTCTGAGTTGAGCAATGACTGCAGGTCCC...GCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAGTACTTGGCTGGATAAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | AGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAGCAGTTCCTGGGGTGTaGCTTGTTCTGCCTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SPKKSCNLRKNQTCSSRLAVPGV*LVLPLP Trigger: GGGAAGAGGCAGAACAAGGCACACCCCAGGAACTGC...TAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CCA 90 bp | GGTATATGTGATGATCAGAGTCGTTGTACATCACGGCATTTTGGAACATCAGCACTGGGCTGCTTTCCTTaGGCTCATCAGCCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GICDDQSRCTSRHFGTSALGCFP*AHQPQP Trigger: AGGCTGAGGCTGATGAGCCCAAGGAAAGCAGCCCAG...TGCTGATGTTCCAAAATGCCGTGATGTACAACGACTCTGATCATCACATATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | CTCCACAGCCATGTGGTATATGTGATGATCAGAGTCGTTGTACATCACGGCATTTTGATCATCCTCTTTTaGGTCTTGCTGAGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LHSHVVYVMIRVVVHHGILIILF*VLLSLP Trigger: GGGGAGGCTCAGCAAGACTCAAAAGAGGATGATCAA...AATGCCGTGATGTACAACGACTCTGATCATCACATATACCACATGGCTGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | AGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTGGGCTGCTAAACCTGTaGCTGGCAATCATCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCNLRKNQTCSSRLTKSPGLLNL*LAIIFQ Trigger: CTGGAAGATGATTGCCAGTCACAGGTTTAGCAGCCC...AGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTTTATCCAGCCAAGTACTCAGAACCTGGATCTGCTCCAAGACTTCCCGCCATATCTTGAGTCTGTaGGTGCTTTTCACCACATCC | + |
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Preference number: 4 (lower is better) Translates to: FLLSSQVLRTWICSKTSRHILSL*VLFTTS Trigger: GGATGTGGTGAAAAGCACTCACAGACTCAAGATATG...GCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAGTACTTGGCTGGATAAAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | AGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAATCAGCCTCAGCCTCTaGATCCTCGGTGTCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SPKKSCNLRKNQTCSSRLISLSL*ILGVLP Trigger: TGGAAGGACACCGAGGATGCAGAGGCTGAGGCTGAT...TAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTCTTCCTGAACTCGGATaGCTTCCCCCTCACCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSLPELG*LPPHLK Trigger: CTTTAGGTGAGGGGGAAGGCATCCGAGTTCAGGAAG...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACCTTCCTGAACTCGGATaGCTTCCCCCTCACCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHLPELG*LPPHLK Trigger: CTTTAGGTGAGGGGGAAGGCATCCGAGTTCAGGAAG...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | AGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTACTCAGAACCTGGATCTaGTCCAAGACTTCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SPKKSCNLRKNQTCSSRLLRTWI*SKTSRC Trigger: GCAGCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAG...TAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056932.9 |
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| CDS-3UTR CCA 90 bp | AACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCGCTACATCCTCTCTCTaGGCTGCTTTCCTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NLRKNQTCSSRLTKSPFFATSSL*AAFLGL Trigger: GAGCCCAAGGAAAGCAGCCCAGAGAGAGGATGTAGC...GAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CCA 90 bp | GGTATATGTGATGATCAGAGTCGTTGTACATCACGGCATTTTGGAACATCAGCAGCTACATCCTCTCTCTaGGCTGCTTTCCTTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GICDDQSRCTSRHFGTSAATSSL*AAFLGL Trigger: GAGCCCAAGGAAAGCAGCCCAGAGAGAGGATGTAGC...TGCTGATGTTCCAAAATGCCGTGATGTACAACGACTCTGATCATCACATATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | GCATCTCCACAGCCATGTGGTATATGTGATGATCAGAGTCGTTGTACATCACGGAACTCAGAGTCATCATaGGAGTCTTGTCCAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: ASPQPCGICDDQSRCTSRNSESS*ESCPES Trigger: GGATTCTGGACAAGACTCTCATGATGACTCTGAGTT...CCGTGATGTACAACGACTCTGATCATCACATATACCACATGGCTGTGGAGATGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTTGATCATCCTCTTTTaGGTCTTGCTGAGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSLIILF*VLLSLP Trigger: GGGGAGGCTCAGCAAGACTCAAAAGAGGATGATCAA...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | AGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTGCAGACCCTTCACCTTaGTCATCCTCTTTTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SCNLRKNQTCSSRLTKSPADPSP*SSSFES Trigger: AGACTCAAAAGAGGATGATCAAGGTGAAGGGTCTGC...AGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTGCAGACCCTTCACCTTaGTCATCCTCTTTTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSADPSP*SSSFES Trigger: AGACTCAAAAGAGGATGATCAAGGTGAAGGGTCTGC...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTGGGACCTGCAGTCATTaGTCAACTCAGAGTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSGTCSH*STQSHH Trigger: ATGATGACTCTGAGTTGAGCAATGACTGCAGGTCCC...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | AGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTGTATCCTGGAGCCTaGTTCTCTGACACGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SCNLRKNQTCSSRLTKSPLYPGA*FSDTGF Trigger: AAAACCCGTGTCAGAGAAGCAGGCTCCAGGATACAA...AGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR GCA 90 bp | CACAGCCATGTGGTATATGTGATGATCAGAGTCGTTGTACATCACGGCATTTTGTTGTATCCTGGAGCCTaGTTCTCTGACACGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: HSHVVYVMIRVVVHHGILLYPGA*FSDTGF Trigger: AAAACCCGTGTCAGAGAAGCAGGCTCCAGGATACAA...CAAAATGCCGTGATGTACAACGACTCTGATCATCACATATACCACATGGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTAACTCAGAGTCATCATaGGAGTCTTGTCCAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: SLASPKKSCNLRKNQTCSNSESS*ESCPES Trigger: GGATTCTGGACAAGACTCTCATGATGACTCTGAGTT...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCATCCACTACATCACGGCATTTTaGAACATCAGCATCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: RKNQTCSSRLTKSPFFIHYITAF*NISIRS Trigger: GGATCTGATGCTGATGTTCCAAAATGCCGTGATGTA...GTGGATGAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056932.9 |
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| CDS GCA 90 bp | CTGAGCCTCCCCCTCAGAGAGCAGTTCCTGGGGTGTGCCTTGTTCTaGCTCTTCCCGAGCTTCTTCACTTTCTACGTCACCCACAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LSLPLREQFLGCALF*LFPSFFTFYVTHKK Trigger: CTTCTTGTGGGTGACGTAGAAAGTGAAGAAGCTCGGGAAGAGGCAGAACAAGGCACACCCCAGGAACTGCTCTCTGAGGGGGAGGCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS GCA 90 bp | TTTCTACGTCACCCACAAGAAGCTCGCTACATCCTCTCTCTGGGCTaGTTTCCTTGGGCTCATCAGCCTCAGCCTCTGCATCCTCGGTGT | + |
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Preference number: 5 (lower is better) Translates to: FLRHPQEARYILSLG*FPWAHQPQPLHPRC Trigger: ACACCGAGGATGCAGAGGCTGAGGCTGATGAGCCCAAGGAAAGCAGCCCAGAGAGAGGATGTAGCGAGCTTCTTGTGGGTGACGTAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS TCA 90 bp | GAGCTGAGGAGGGACCTGCAGTCATTGCTCAACTCAGAGTCATCATaGGAGTCTTGTCCAGAATCCAACCAAACCCACTCACACCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: ELRRDLQSLLNSESS*ESCPESNQTHSHPA Trigger: GGCGGGGTGTGAGTGGGTTTGGTTGGATTCTGGACAAGACTCTCATGATGACTCTGAGTTGAGCAATGACTGCAGGTCCCTCCTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS CCA 90 bp | TTCACTTTCTACGTCACCCACAAGAAGCTCGCTACATCCTCTCTCTaGGCTGCTTTCCTTGGGCTCATCAGCCTCAGCCTCTGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: FTFYVTHKKLATSSL*AAFLGLISLSLCIL Trigger: GAGGATGCAGAGGCTGAGGCTGATGAGCCCAAGGAAAGCAGCCCAGAGAGAGGATGTAGCGAGCTTCTTGTGGGTGACGTAGAAAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | AACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAACAAAGTCCCCTTTCTTCTTCCTGGGGTGTGCCTaGTTCTGCCTCTTCCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: NLRKNQTCSSRLTKSPFFFLGCA*FCLFPS Trigger: GCTCGGGAAGAGGCAGAACAAGGCACACCCCAGGAA...GAAGAAAGGGGACTTTGTTAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTTTATCCAGCCAAGTACTCAGAACCTGGATCTGCTCCAAGACTTCCCGCCTTTTCACCACATCCTaGTATCCTGGAGCCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FLLSSQVLRTWICSKTSRLFTTS*YPGACF Trigger: GAAGCAGGCTCCAGGATACAAGGATGTGGTGAAAAG...GCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAGTACTTGGCTGGATAAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS TCA 90 bp | GGTAGAGGCAGAGCTTCATTGGCTGTAGACCATATCTTGAGTCTGTaGGTGCTTTTCACCACATCCTTGTATCCTGGAGCCTGCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GRGRASLAVDHILSL*VLFTTSLYPGACFS Trigger: AGAGAAGCAGGCTCCAGGATACAAGGATGTGGTGAAAAGCACTCACAGACTCAAGATATGGTCTACAGCCAATGAAGCTCTGCCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | GCATCTCCACAGCCATGTGGTATATGTGATGATCAGAGTCGTTGTACATCACGGCTTGATCATCCTCTTTaGAGTCTTGCTGAGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: ASPQPCGICDDQSRCTSRLDHPL*SLAEPP Trigger: GGGAGGCTCAGCAAGACTCAAAAGAGGATGATCAAG...CCGTGATGTACAACGACTCTGATCATCACATATACCACATGGCTGTGGAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | TTCCTTTTATCCAGCCAAGTACTCAGAACCTGGATCTGCTCCAAGACTTCCCGCAGAGGCAGAGCTTCATaGGCTGTAGACCATATCTTG | + |
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Preference number: 5 (lower is better) Translates to: FLLSSQVLRTWICSKTSRRGRAS*AVDHIL Trigger: CAAGATATGGTCTACAGCCAATGAAGCTCTGCCTCT...GCGGGAAGTCTTGGAGCAGATCCAGGTTCTGAGTACTTGGCTGGATAAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTAGGGACCTGCAGTCATaGCTCAACTCAGAGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: SLASPKKSCNLRKNQTCSRDLQS*LNSESS Trigger: TGATGACTCTGAGTTGAGCAATGACTGCAGGTCCCT...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTCTTGATCATCCTCTTTaGAGTCTTGCTGAGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SLASPKKSCNLRKNQTCSLDHPL*SLAEPP Trigger: GGGAGGCTCAGCAAGACTCAAAAGAGGATGATCAAG...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTCTTTTCACCACATCCTaGTATCCTGGAGCCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLASPKKSCNLRKNQTCSLFTTS*YPGACF Trigger: GAAGCAGGCTCCAGGATACAAGGATGTGGTGAAAAG...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAAGGGACCTGCAGTCATaGCTCAACTCAGAGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: SPKKSCNLRKNQTCSSRLRDLQS*LNSESS Trigger: TGATGACTCTGAGTTGAGCAATGACTGCAGGTCCCT...TAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS TCA 90 bp | GCCTGCTTCTCTGACACGGGTTTTAGAAATGGGCTGCTAAACCTGTaGCTGGCAATCATCTTCCAGACTTGCAAAAGAGTCTTCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: ACFSDTGFRNGLLNL*LAIIFQTCKRVFLN Trigger: ATTTAAGAAGACTCTTTTGCAAGTCTGGAAGATGATTGCCAGTCACAGGTTTAGCAGCCCATTTCTAAAACCCGTGTCAGAGAAGCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCAGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTGTCATCATGAGAGTCTaGTCCAGAATCCAACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: SLASPKKSCNLRKNQTCSVIMRV*SRIQPN Trigger: GTTTGGTTGGATTCTGGACAAGACTCTCATGATGAC...ACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACTGGCCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAGTCATCATGAGAGTCTaGTCCAGAATCCAACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: SPKKSCNLRKNQTCSSRLVIMRV*SRIQPN Trigger: GTTTGGTTGGATTCTGGACAAGACTCTCATGATGAC...TAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTAAGAAGAGCTGTAACTTGAGAAAGAACCAGACTTGTAGTTCCAGGCTAGTACATCACGGCATTTaGGAACATCAGCATCAGATC | + |
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Preference number: 5 (lower is better) Translates to: SPKKSCNLRKNQTCSSRLVHHGI*EHQHQI Trigger: GATCTGATGCTGATGTTCCAAAATGCCGTGATGTAC...TAGCCTGGAACTACAAGTCTGGTTCTTTCTCAAGTTACAGCTCTTCTTAGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056932.9 |
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| CDS CAA 90 bp | GTCTTGCTGAGCCTCCCCCTCAGAGAGCAGTTCCTGGGGTGTGCCTaGTTCTGCCTCTTCCCGAGCTTCTTCACTTTCTACGTCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: VLLSLPLREQFLGCA*FCLFPSFFTFYVTH Trigger: GTGGGTGACGTAGAAAGTGAAGAAGCTCGGGAAGAGGCAGAACAAGGCACACCCCAGGAACTGCTCTCTGAGGGGGAGGCTCAGCAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS GCA 72 bp | CCCCTCAGAGAGCAGTTCCTGGGGTGTGCCTTGTTCTaGCTCTTCCCGAGCTTCTTCACTTTCTACGTCACC | + |
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Preference number: 6 (lower is better) Translates to: PLREQFLGCALF*LFPSFFTFYVT Trigger: GGTGACGTAGAAAGTGAAGAAGCTCGGGAAGAGGCAGAACAAGGCACACCCCAGGAACTGCTCTCTGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS CCA 72 bp | TACGTCACCCACAAGAAGCTCGCTACATCCTCTCTCTaGGCTGCTTTCCTTGGGCTCATCAGCCTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YVTHKKLATSSL*AAFLGLISLSL Trigger: GAGGCTGAGGCTGATGAGCCCAAGGAAAGCAGCCCAGAGAGAGGATGTAGCGAGCTTCTTGTGGGTGACGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS CAA 72 bp | AGCCTCCCCCTCAGAGAGCAGTTCCTGGGGTGTGCCTaGTTCTGCCTCTTCCCGAGCTTCTTCACTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SLPLREQFLGCA*FCLFPSFFTFY Trigger: GTAGAAAGTGAAGAAGCTCGGGAAGAGGCAGAACAAGGCACACCCCAGGAACTGCTCTCTGAGGGGGAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS CAA 72 bp | CGTCTGAAGCAGACCCTTCACCTTGATCATCCTCTTTaGAGTCTTGCTGAGCCTCCCCCTCAGAGAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RLKQTLHLDHPL*SLAEPPPQRAV Trigger: AACTGCTCTCTGAGGGGGAGGCTCAGCAAGACTCAAAAGAGGATGATCAAGGTGAAGGGTCTGCTTCAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS CAA 72 bp | GCAGTCATTGCTCAACTCAGAGTCATCATGAGAGTCTaGTCCAGAATCCAACCAAACCCACTCACACCCCGC | + |
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Preference number: 6 (lower is better) Translates to: AVIAQLRVIMRV*SRIQPNPLTPR Trigger: GCGGGGTGTGAGTGGGTTTGGTTGGATTCTGGACAAGACTCTCATGATGACTCTGAGTTGAGCAATGACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056932.9 ENSMUST00000129566.2 |
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| CDS GCA 72 bp | ATGGGTCTTTTCACCACATCCTTGTATCCTGGAGCCTaGTTCTCTGACACGGGTTTTAGAAATGGGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: MGLFTTSLYPGA*FSDTGFRNGLL Trigger: TAGCAGCCCATTTCTAAAACCCGTGTCAGAGAAGCAGGCTCCAGGATACAAGGATGTGGTGAAAAGACCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056932.9 |
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