Pregenerated sensors for BRD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024335Ensembl transcript IDs: ENSMUST00000025193.14, ENSMUST00000095347.13, ENSMUST00000114242.9, ENSMUST00000151986.2, ENSMUST00000154232.9, ENSMUST00000173204.2, ENSMUST00000235313.2
Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCGGCCACTCTCTCTGCGCATAGGAGGGAGCCTTGCTGCCTTTaGCTCAAGACTCCCAGGAGGACTAGCTGGGGAACCAGGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: WAATLSAHRREPCCL*LKTPRRTSWGTRSQ Trigger: CTGGCTCCTGGTTCCCCAGCTAGTCCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATGCGCAGAGAGAGTGGCCGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 90 bp | CTCCTATGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTaGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLWRGEMKKRHSKGK*GRVVQGSGPAEPSC Trigger: GCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCATAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR GCA 90 bp | TTTGATTGGGCGGCCACTCTCTCTGCGCATAGGAGGGAGCCTTGCTaGCTTTGGCTCAAGACTCCCAGGAGGACTAGCTGGGGAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: FDWAATLSAHRREPC*LWLKTPRRTSWGTR Trigger: CCTGGTTCCCCAGCTAGTCCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATGCGCAGAGAGAGTGGCCGCCCAATCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR TCA 90 bp | CCGGTAGTCACGGTTCTCCATCTTCCGCTGCAGAAGGAGGCAGCATaGGAAGCTGCACAGGCAGAGTCTCATCTTTCCCTGCCAACCCGA | + |
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Preference number: 1 (lower is better) Translates to: PVVTVLHLPLQKEAA*EAAQAESHLSLPTR Trigger: TCGGGTTGGCAGGGAAAGATGAGACTCTGCCTGTGCAGCTTCTCATGCTGCCTCCTTCTGCAGCGGAAGATGGAGAACCGTGACTACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173204.2 |
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| 3UTR CCA 90 bp | GTGTTGCTGTTGCGAGTCAGGCAAGTCTTTTCGTGGGGGTTTGATTaGGCGGCCACTCTCTCTGCGCATAGGAGGGAGCCTTGCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: VLLLRVRQVFSWGFD*AATLSAHRREPCCL Trigger: AAGGCAGCAAGGCTCCCTCCTATGCGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCTGACTCGCAACAGCAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR GCA 90 bp | CCCACCACCTGCTTTCTTAGATTTCTTGGGCTGAGGTGGGCGAGGTaGCCTAGGCCCCTTATCATCTTCATCGATCCCAATTCGGCCACG | + |
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Preference number: 1 (lower is better) Translates to: PTTCFLRFLGLRWAR*PRPLIIFIDPNSAT Trigger: CGTGGCCGAATTGGGATCGATGAAGATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCAGGTGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 90 bp | CTTAGAGCTCTGGTGTTGCTGTTGCGAGTCAGGCAAGTCTTTTCGTaGGGGTTTGATTGGGCGGCCACTCTCTCTGCGCATAGGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LRALVLLLRVRQVFS*GFDWAATLSAHRRE Trigger: CTCCCTCCTATGCGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR GCA 90 bp | AAAGCCAGGATGGCTGAGTGTAGTAGCATTGCTACCCCCACCACCTaGTTTCTTAGATTTCTTGGGCTGAGGTGGGCGAGGTGCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KARMAECSSIATPTT*FLRFLGLRWARCPR Trigger: CCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCAGGTGGTGGGGGTAGCAATGCTACTACACTCAGCCATCCTGGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR TCA 90 bp | GTAGCATTGCTACCCCCACCACCTGCTTTCTTAGATTTCTTGGGCTaGGGTGGGCGAGGTGCCCTAGGCCCCTTATCATCTTCATCGATC | + |
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Preference number: 1 (lower is better) Translates to: VALLPPPPAFLDFLG*GGRGALGPLSSSSI Trigger: GATCGATGAAGATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCAGGTGGTGGGGGTAGCAATGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR GCA 90 bp | TTCTTGGGAGGCTTTTTGGTGGAGTTGAGCTGTCCACTGACATCCTaGAACCGCTTCTCTAGCTCCCGCTTCTTCTCCAAAGCCAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: FLGGFLVELSCPLTS*NRFSSSRFFSKASS Trigger: GGAACTGGCTTTGGAGAAGAAGCGGGAGCTAGAGAAGCGGTTGCAGGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCCTCCCAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 90 bp | ATTGCTACCCCCACCACCTGCTTTCTTAGATTTCTTGGGCTGAGGTaGGCGAGGTGCCCTAGGCCCCTTATCATCTTCATCGATCCCAAT | + |
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Preference number: 1 (lower is better) Translates to: IATPTTCFLRFLGLR*ARCPRPLIIFIDPN Trigger: ATTGGGATCGATGAAGATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCAGGTGGTGGGGGTAGCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 90 bp | CTGGTAATACTGCCCTGGAGTGCTGCTAACTTGGCCCCCTTCTTATaGCTGTTTTTAGGGATGGTCACCACAAGCTCTTGCTCCTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LVILPWSAANLAPFL*LFLGMVTTSSCSSC Trigger: ACAAGAGGAGCAAGAGCTTGTGGTGACCATCCCTAAAAACAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCCAGGGCAGTATTACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 90 bp | TTGCAGTGCTTTAACTGCTCTGACAGCTTCCCTTTCTTAGAGCTCTaGTGTTGCTGTTGCGAGTCAGGCAAGTCTTTTCGTGGGGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LQCFNCSDSFPFLEL*CCCCESGKSFRGGL Trigger: CAAACCCCCACGAAAAGACTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR GCA 90 bp | GCCCCCTTCTTATGGCTGTTTTTAGGGATGGTCACCACAAGCTCTTaGTCCTCTTGTGGCATGGATGCTACTTTCTGTAGGAAGATCTTT | + |
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Preference number: 1 (lower is better) Translates to: APFLWLFLGMVTTSS*SSCGMDATFCRKIF Trigger: AAAGATCTTCCTACAGAAAGTAGCATCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGACCATCCCTAAAAACAGCCATAAGAAGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 90 bp | TCAATTTCTTCTGGATTTGAATCACGTAGAGAGGGTTCCCTGGCTTaGATGATATGTACTACTCGACCCAGCTTTTCCCCAGGTAACTTA | + |
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Preference number: 1 (lower is better) Translates to: SISSGFESRREGSLA*MICTTRPSFSPGNL Trigger: TAAGTTACCTGGGGAAAAGCTGGGTCGAGTAGTACATATCATCCAAGCCAGGGAACCCTCTCTACGTGATTCAAATCCAGAAGAAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: ATAQGALCQAYPHSHPYPPAEPS*PIWPGP Trigger: GGGGCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGGGGTCCGGTCCTaGGGAGCCTTCCTGCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CPTPIILNRDTTPKRARNSGVRS*GAFLPH Trigger: ATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGA...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR TCA 90 bp | ACCACCTGCTTTCTTAGATTTCTTGGGCTGAGGTGGGCGAGGTGCCCTAGGCCCTTCTTGGCAAGGGGCTaGGCTGGAGGCGCTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TTCFLRFLGLRWARCPRPFLARG*AGGAAD Trigger: ATCAGCAGCGCCTCCAGCTCAGCCCCTTGCCAAGAA...GGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCAGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTACCTGCGGAGCCTTCCTaGCCCATCTGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PIILNRDTTPKRARNSIVPAEPS*PIWPGP Trigger: GGGGCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGAAAGTGGGGAAGGGTaGTTCAGGGGTCCGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PTPIILNRDTTPKRARNSESGEG*FRGPVL Trigger: CAGGACCGGACCCCTGAACCACCCTTCCCCACTTTC...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR CAA 90 bp | CTCTGGTGTTGCTGTTGCGAGTCAGGCAAGTCTTTTCGTGGGGGTTaGATTGGGCGGCCACTCTCTCTGCGCATAGGAGGGAGCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LWCCCCESGKSFRGG*IGRPLSLRIGGSLA Trigger: AGCAAGGCTCCCTCCTATGCGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCTGACTCGCAACAGCAACACCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCCCTGGGACAGGGCAGCCAGTTGTTCATGAACTGCCCGAAGCTGCTCCTTTCCTCCTCAGAGTCTaGGCTTTCACTCTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LGPGTGQPVVHELPEAAPFLLRV*AFTLLL Trigger: GAGGAGGAGAGTGAAAGCTCAGACTCTGAGGAGGAA...AGGAGCAGCTTCGGGCAGTTCATGAACAACTGGCTGCCCTGTCCCAGGGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TTPKRARNSIVFCPCPCLPAEPS*PIWPGP Trigger: GGGGCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCTGCGGAGCCTTCCTaGCCCATCTGGCCTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: ILNRDTTPKRARNSIVFCPAEPS*PIWPGP Trigger: GGGGCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGG...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGACTCTGAAGAGGATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGAAAGTGGGGAAGGGTaGTTCAGGGGTCCGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LEDSEEDLVNPGGKAVETESGEG*FRGPVL Trigger: CAGGACCGGACCCCTGAACCACCCTTCCCCACTTTC...AGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTCCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCCGCTTGGGCTTAGATATTGGGCCCTGGGACAGGGCAGCCAGTTGTTCAGGCAAGTCTTTTCGTaGGGGTTTGATTGGGCGGCC | + |
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Preference number: 2 (lower is better) Translates to: SLPLGLRYWALGQGSQLFRQVFS*GFDWAA Trigger: GGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCT...GAACAACTGGCTGCCCTGTCCCAGGGCCCAATATCTAAGCCCAAGCGGAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CAA 90 bp | CAGAGTCTCATCTTTCCCTGCCAACCCGACTCAAGCAGCCCTCTCTaGAAACAAGTGGGGATGACCTTAGGGATCTGTGCCCTGGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: QSLIFPCQPDSSSPL*KQVGMTLGICALGF Trigger: GAACCCCAGGGCACAGATCCCTAAGGTCATCCCCACTTGTTTCAAGAGAGGGCTGCTTGAGTCGGGTTGGCAGGGAAAGATGAGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173204.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGGAGGACCACGGCTACACACCCCCAGCCTTACCACATAGCTTAAATAAATCCCACCCATACCCTTaGCCCACCCCCATCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: WREDHGYTPPALPHSLNKSHPYP*PTPIIL Trigger: GAGGATGATGGGGGTGGGGCAAGGGTATGGGTGGGA...TTTATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCAAACTCCTGTGCATCCCGGTAGTCACGGTTCTCCATCTTCCGCTGCAGGCAGCATGAGAAGCTaGACAGGCAGAGTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: QQQTPVHPGSHGSPSSAAGSMRS*TGRVSS Trigger: AGATGAGACTCTGCCTGTGCAGCTTCTCATGCTGCC...TGCAGCGGAAGATGGAGAACCGTGACTACCGGGATGCACAGGAGTTTGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173204.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCACTTGCTGTGCAGATGACTCTGTCTTCTCACTCGCTTTCTTGGGAGGCTCACAGCAAGGGAAAGTaGGGAAGGGTGGTTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LPLAVQMTLSSHSLSWEAHSKGK*GRVVQG Trigger: CCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTG...AGCCTCCCAAGAAAGCGAGTGAGAAGACAGAGTCATCTGCACAGCAAGTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGCCACTCTCTCTGCGCATAGGAGGGAGCCTTGCTGCCTTTGGCTCAAGAAGGTATTTCAGGTGGTaGTGTATACAGGGCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: GRPLSLRIGGSLAAFGSRRYFRW*CIQGCM Trigger: CATACAGCCCTGTATACACCACCACCTGAAATACCT...TCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATGCGCAGAGAGAGTGGCCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CAA 90 bp | GACTCTGTCTTCTCACTCGCTTTCTTGGGAGGCTTTTTGGTGGAGTaGAGCTGTCCACTGACATCCTGCAACCGCTTCTCTAGCTCCCGC | + |
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Preference number: 2 (lower is better) Translates to: DSVFSLAFLGGFLVE*SCPLTSCNRFSSSR Trigger: GCGGGAGCTAGAGAAGCGGTTGCAGGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCCTCCCAAGAAAGCGAGTGAGAAGACAGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR TCA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATATGGAGGGGTGAGATaGAGAAGCGTCACAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQYGGVR*RSVTAR Trigger: CCTTGCTGTGACGCTTCTTCATCTCACCCCTCCATA...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCTGCTTTCTTCCTCCTCCTCAGAATCATAGCCAGTGGGAAGGACAGGTGTATGGAGGGGTGAGATaGAGAAGCGTCACAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: WACFLPPPQNHSQWEGQVYGGVR*RSVTAR Trigger: CCTTGCTGTGACGCTTCTTCATCTCACCCCTCCATA...CACCTGTCCTTCCCACTGGCTATGATTCTGAGGAGGAGGAAGAAAGCAGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCTCTTCCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCAGCAGCAAACTCCTGTaGATCCCGGTAGTCACGGTT | + |
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Preference number: 2 (lower is better) Translates to: LLLFLRGTLTATFLTGGLSSKLL*IPVVTV Trigger: AACCGTGACTACCGGGATGCACAGGAGTTTGCTGCT...GAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGGAAGAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154232.9 ENSMUST00000173204.2 |
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| 3UTR-3UTR CCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCACAGCAAGGGAAAGTaGGGAAGGGTGGTTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: DTTPKRARNSIVFCPCPCHSKGK*GRVVQG Trigger: CCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTG...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCTGAAGAGGATTCTTCTTCCCTCCCCATaGAAGCTGGAGGGAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: PQRNSHCYFPHWRTLKRILLPSP*KLEGGP Trigger: TGGTCCTCCCTCCAGCTTCCATGGGGAGGGAAGAAG...AATCCTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCACTTGCTGTGCAGATGACTCTGTCTTCTCACTCGCTTTCTTGGGAGGCTGTCACCACAAGCTCTTaGTCCTCTTGTGGCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: LPLAVQMTLSSHSLSWEAVTTSS*SSCGMD Trigger: ATCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGAC...AGCCTCCCAAGAAAGCGAGTGAGAAGACAGAGTCATCTGCACAGCAAGTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | TTACATGTTAGACTCAAGAAAGAAAAGACAGTCTTGGGGCCAACTGGAGAGGTGGAAAGTGGGGAAGGGTaGTTCAGGGGTCCGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LHVRLKKEKTVLGPTGEVESGEG*FRGPVL Trigger: CAGGACCGGACCCCTGAACCACCCTTCCCCACTTTC...CACCTCTCCAGTTGGCCCCAAGACTGTCTTTTCTTTCTTGAGTCTAACATGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCTCTTCCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCCCTTTCTTAGAGCTCTaGTGTTGCTGTTGCGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LLLFLRGTLTATFLTGGLPFLEL*CCCCES Trigger: TGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGG...GAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGGAAGAGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCCTCTTCCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTGGACAATATCATCGGTaGGCTTGTTATAAATGTAAC | + |
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Preference number: 2 (lower is better) Translates to: PPPLPQRNSHCYFPHWRTGQYHR*ACYKCN Trigger: GTTACATTTATAACAAGCCCACCGATGATATTGTCC...AGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGGAAGAGGAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR GCA 72 bp | GCGGCCACTCTCTCTGCGCATAGGAGGGAGCCTTGCTaGCTTTGGCTCAAGACTCCCAGGAGGACTAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: AATLSAHRREPC*LWLKTPRRTSW Trigger: CCAGCTAGTCCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATGCGCAGAGAGAGTGGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 72 bp | AGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTaGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: RGEMKKRHSKGK*GRVVQGSGPAE Trigger: CTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| 3UTR CCA 72 bp | ACTCTCTCTGCGCATAGGAGGGAGCCTTGCTGCCTTTaGCTCAAGACTCCCAGGAGGACTAGCTGGGGAACC | + |
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Preference number: 3 (lower is better) Translates to: TLSAHRREPCCL*LKTPRRTSWGT Trigger: GGTTCCCCAGCTAGTCCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATGCGCAGAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| 3UTR CCA 72 bp | TTGCGAGTCAGGCAAGTCTTTTCGTGGGGGTTTGATTaGGCGGCCACTCTCTCTGCGCATAGGAGGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRVRQVFSWGFD*AATLSAHRREP Trigger: AGGCTCCCTCCTATGCGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCTGACTCGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR TCA 72 bp | CTACCCCCACCACCTGCTTTCTTAGATTTCTTGGGCTaGGGTGGGCGAGGTGCCCTAGGCCCCTTATCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LPPPPAFLDFLG*GGRGALGPLSS Trigger: AGATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCAGGTGGTGGGGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CCA 72 bp | CTGGTGTTGCTGTTGCGAGTCAGGCAAGTCTTTTCGTaGGGGTTTGATTGGGCGGCCACTCTCTCTGCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVLLLRVRQVFS*GFDWAATLSAH Trigger: ATGCGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCTGACTCGCAACAGCAACACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CCA 72 bp | CCCACCACCTGCTTTCTTAGATTTCTTGGGCTGAGGTaGGCGAGGTGCCCTAGGCCCCTTATCATCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: PTTCFLRFLGLR*ARCPRPLIIFI Trigger: GATGAAGATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCAGGTGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCCTCTTCCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCTGGAGTGCTGCTAACTaGGCCCCCTTCTTATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLLFLRGTLTATFLTGGLWSAAN*APFLWL Trigger: CAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCCA...GAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGGAAGAGGAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR-3UTR CAA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCCTTAGAGCTCTGGTGTaGCTGTTGCGAGTCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: DLVNPGGKAVETGRGPGSLRALV*LLRVRQ Trigger: TTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAG...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR TCA 72 bp | AGCACTGAGACGGGACACTGCCACTTGCTGTGCAGATaGCTCTGTCTTCTCACTCGCTTTCTTGGGAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: STETGHCHLLCR*LCLLTRFLGRL Trigger: AAGCCTCCCAAGAAAGCGAGTGAGAAGACAGAGTCATCTGCACAGCAAGTGGCAGTGTCCCGTCTCAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CCA 72 bp | CTGCCCTGGAGTGCTGCTAACTTGGCCCCCTTCTTATaGCTGTTTTTAGGGATGGTCACCACAAGCTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPWSAANLAPFL*LFLGMVTTSSC Trigger: GCAAGAGCTTGTGGTGACCATCCCTAAAAACAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCCAGGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR GCA 72 bp | GGCTTTTTGGTGGAGTTGAGCTGTCCACTGACATCCTaGAACCGCTTCTCTAGCTCCCGCTTCTTCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GFLVELSCPLTS*NRFSSSRFFSK Trigger: TTTGGAGAAGAAGCGGGAGCTAGAGAAGCGGTTGCAGGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCTGCTTTCTTCCTCCTCCTCAGAATCATAGCCAGTGGGAAGGACAGGTGGAATTCAATCGTATTTaGTCCATGTCCCTGCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: WACFLPPPQNHSQWEGQVEFNRI*SMSLPS Trigger: GGAAGGCAGGGACATGGACAAAATACGATTGAATTC...CACCTGTCCTTCCCACTGGCTATGATTCTGAGGAGGAGGAAGAAAGCAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCACTTGCTGTGCAGATGACTCTGTCTTCTCACTCGCTTTCTTGGGAGGCTAAGCCAGTTCCTCCTTaGTTTTTCCCACAGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LPLAVQMTLSSHSLSWEAKPVPP*FFPQVS Trigger: GGAAACCTGTGGGAAAAACAAAGGAGGAACTGGCTT...AGCCTCCCAAGAAAGCGAGTGAGAAGACAGAGTCATCTGCACAGCAAGTGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR GCA 72 bp | TGCTTTCTTAGATTTCTTGGGCTGAGGTGGGCGAGGTaGCCTAGGCCCCTTATCATCTTCATCGATCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CFLRFLGLRWAR*PRPLIIFIDPN Trigger: ATTGGGATCGATGAAGATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAATCTAAGAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CCA 72 bp | TTCCTTTTTCTCTCTCTTCCGCTTGGGCTTAGATATTaGGCCCTGGGACAGGGCAGCCAGTTGTTCATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: FLFLSLPLGLRY*ALGQGSQLFMN Trigger: GTTCATGAACAACTGGCTGCCCTGTCCCAGGGCCCAATATCTAAGCCCAAGCGGAAGAGAGAGAAAAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR GCA 72 bp | GACAGCTTCCCTTTCTTAGAGCTCTGGTGTTGCTGTTaGGAGTCAGGCAAGTCTTTTCGTGGGGGTTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: DSFPFLELWCCC*ESGKSFRGGLI Trigger: AATCAAACCCCCACGAAAAGACTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGGGAAGCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR GCA 72 bp | CGTGCTTCTTTGAGAGCAGTTCCTTCAGGATGCCGTTaGAGTGCTTTAACTGCTCTGACAGCTTCCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RASLRAVPSGCR*SALTALTASLS Trigger: AGAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAACGGCATCCTGAAGGAACTGCTCTCAAAGAAGCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CCA 72 bp | GCCTGCTTTCTTCCTCCTCCTCAGAATCATAGCCAGTaGGAAGGACAGGTGGAGCTGTCTTTTGAGACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ACFLPPPQNHSQ*EGQVELSFETF Trigger: AAAAGTCTCAAAAGACAGCTCCACCTGTCCTTCCCACTGGCTATGATTCTGAGGAGGAGGAAGAAAGCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR TCA 72 bp | GATTTGAATCACGTAGAGAGGGTTCCCTGGCTTGGATaGTATGTACTACTCGACCCAGCTTTTCCCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DLNHVERVPWLG*YVLLDPAFPQV Trigger: TACCTGGGGAAAAGCTGGGTCGAGTAGTACATATCATCCAAGCCAGGGAACCCTCTCTACGTGATTCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CCA 72 bp | TCTGGATTTGAATCACGTAGAGAGGGTTCCCTGGCTTaGATGATATGTACTACTCGACCCAGCTTTTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGFESRREGSLA*MICTTRPSFSP Trigger: TGGGGAAAAGCTGGGTCGAGTAGTACATATCATCCAAGCCAGGGAACCCTCTCTACGTGATTCAAATCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR GCA 72 bp | TTATGGCTGTTTTTAGGGATGGTCACCACAAGCTCTTaGTCCTCTTGTGGCATGGATGCTACTTTCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LWLFLGMVTTSS*SSCGMDATFCR Trigger: CCTACAGAAAGTAGCATCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGACCATCCCTAAAAACAGCCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR GCA 72 bp | TTCTTTGAGAGCAGTTCCTTCAGGATGCCGTTGCAGTaGTTTAACTGCTCTGACAGCTTCCCTTTCTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FFESSSFRMPLQ*FNCSDSFPFLE Trigger: CTCTAAGAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAACGGCATCCTGAAGGAACTGCTCTCAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CCA 72 bp | TTTAACTGCTCTGACAGCTTCCCTTTCTTAGAGCTCTaGTGTTGCTGTTGCGAGTCAGGCAAGTCTTTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: FNCSDSFPFLEL*CCCCESGKSFR Trigger: ACGAAAAGACTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGGGAAGCTGTCAGAGCAGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR TCA 72 bp | GATGACCTTAGGGATCTGTGCCCTGGGGTTCAAGTTTaGAGTCCAAAGATTTGGGGTAGGTTTGAAGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: DDLRDLCPGVQV*SPKIWGRFEEI Trigger: TATTTCTTCAAACCTACCCCAAATCTTTGGACTTCAAACTTGAACCCCAGGGCACAGATCCCTAAGGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173204.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCTTCTTGGCAAGGGGCTaGGCTGGAGGCGCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGFLARG*AGGAAD Trigger: ATCAGCAGCGCCTCCAGCTCAGCCCCTTGCCAAGAA...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCTCGTGGGGGTTTGATTaGGCGGCCACTCTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGSWGFD*AATLSA Trigger: CGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGA...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCGCAGCCAGTTGTTCATaGACTGCCCGAAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGAASCS*TARSCS Trigger: GGAGCAGCTTCGGGCAGTTCATGAACAACTGGCTGC...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCAGGGGGTGGTGGATTaGCAGGGGCCAGTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAQGVVD*QGPVVK Trigger: CTTTACAACTGGCCCCTGCCAATCCACCACCCCCTG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCGAGCCTTGCTGCCTTTaGCTCAAGACTCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGEPCCL*LKTPRR Trigger: CCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTC...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTTGGGCTTAGATATTaGGCCCTGGGACAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLALGLRY*ALGQGS Trigger: GCTGCCCTGTCCCAGGGCCCAATATCTAAGCCCAAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCTTTCTTGGGCTGAGGTaGGCGAGGTGCCCTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RESGEGWFRGPVLRSLPAFLGLR*ARCPRP Trigger: GGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAA...GGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAGACAGCAGGCACCTaGTGGGCACTGGTAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAETAGT*WALVIL Trigger: CAGTATTACCAGTGCCCATCAGGTGCCTGCTGTCTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGGCAAGTCTTTTCGTaGGGGTTTGATTGGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLARQVFS*GFDWAA Trigger: GGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCATAGGAGGGAGCCTTaGTGCCTTTGGCTCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAHRREP*CLWLKT Trigger: AGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCCTGGTAATACTGCCCTaGAGTGCTGCTAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGLVILP*SAANLA Trigger: GGCCAAGTTAGCAGCACTCCAGGGCAGTATTACCAG...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGAAGAGGAGAAGAGATaGCTGATGGGTGGGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAEEEKR*LMGGEC Trigger: ACATTCCCCACCCATCAGTCATCTCTTCTCCTCTTC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCGTCACCACAAGCTCTTaGTCCTCTTGTGGCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGVTTSS*SSCGMD Trigger: ATCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGAC...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGAGCTGGAGGCGCTGCTaGTACAGCAAGGAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEEASQQGKVGKGGSGVRSWRRC*YSKEWG Trigger: CCCCCACTCCTTGCTGTATCAGCAGCGCCTCCAGCT...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCTTCCTCCTCAGAGTCTaGGCTTTCACTCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RESGEGWFRGPVLRSLPAFLLRV*AFTLLL Trigger: GAGGAGGAGAGTGAAAGCTCAGACTCTGAGGAGGAA...GGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCTTCCAGTGGCTCATCTaGCATCTTGGCATAGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGFQWLI*HLGIAK Trigger: TTTCGCTATGCCAAGATGCCAGATGAGCCACTGGAA...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTCCAGTGGCTCATCTaGCATCTTGGCATAGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAFQWLI*HLGIAK Trigger: TTTCGCTATGCCAAGATGCCAGATGAGCCACTGGAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTTTCTTGGGCTGAGGTaGGCGAGGTGCCCTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DEEASQQGKVGKGGSGVRFLGLR*ARCPRP Trigger: GGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAA...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTTGTGATAATCCTCTaGGGATGGCTATCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAFVIIL*GWLSMG Trigger: GCCCATGGATAGCCATCCCCAGAGGATTATCACAAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTTCTTGGCAAGGGGCTaGGCTGGAGGCGCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPTPIILNRDTTPKRARNFLARG*AGGAAD Trigger: ATCAGCAGCGCCTCCAGCTCAGCCCCTTGCCAAGAA...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATCTGAGGTGGGCGAGGTaGCCTAGGCCCCTTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPTPIILNRDTTPKRARNLRWAR*PRPLII Trigger: GATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAG...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCGCTACCCCCACCACCTaGTTTCTTAGATTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RESGEGWFRGPVLRSLPAATPTT*FLRFLG Trigger: CCCAAGAAATCTAAGAAAGCAGGTGGTGGGGGTAGC...GGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTCAGGGGGTGGTGGATTaGCAGGGGCCAGTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATAQGALCQAYPHSHPYPQGVVD*QGPVVK Trigger: CTTTACAACTGGCCCCTGCCAATCCACCACCCCCTG...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCAGGTATTTCAGGTGGTaGTGTATACAGGGCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLARYFRW*CIQGCM Trigger: CATACAGCCCTGTATACACCACCACCTGAAATACCT...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCGAGCCTTGCTGCCTTTaGCTCAAGACTCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTEPCCL*LKTPRR Trigger: CCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTC...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCTCTCATCATAACTCATaGGCCTGCTTTCTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGSHHNS*ACFLPP Trigger: AGGAGGAAGAAAGCAGGCCCATGAGTTATGATGAGA...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| 3UTR CAA 72 bp | GGGCTTAGATATTGGGCCCTGGGACAGGGCAGCCAGTaGTTCATGAACTGCCCGAAGCTGCTCCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRYWALGQGSQ*FMNCPKLLLQL Trigger: GAGCTGCAGGAGCAGCTTCGGGCAGTTCATGAACAACTGGCTGCCCTGTCCCAGGGCCCAATATCTAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTAGCTGGAGGCGCTGCTaGTACAGCAAGGAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVSWRRC*YSKEWG Trigger: CCCCCACTCCTTGCTGTATCAGCAGCGCCTCCAGCT...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATGCAGCCAGTTGTTCATaGACTGCCCGAAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPTPIILNRDTTPKRARNAASCS*TARSCS Trigger: GGAGCAGCTTCGGGCAGTTCATGAACAACTGGCTGC...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTCATCACTACCTTGTaGAGGTACTGCAGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAFITTL*RYCSWF Trigger: AAACCAACTGCAGTACCTGCACAAGGTAGTGATGAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCACTGAGGTGGGCGAGGTaGCCTAGGCCCCTTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSLRWAR*PRPLII Trigger: GATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAG...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCTTTCTTAGAGCTCTaGTGTTGCTGTTGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RESGEGWFRGPVLRSLPAPFLEL*CCCCES Trigger: TGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGG...GGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATGAATTTTGGCCACCGTaGTCCTCTCCCAACCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPTPIILNRDTTPKRARNEFWPP*SSPNQG Trigger: CCCCTGGTTGGGAGAGGACCACGGTGGCCAAAATTC...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR TCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTGGCAGCGTGCTTCTTTaGGAGCAGTTCCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATAQGALCQAYPHSHPYPGSVLL*EQFLQD Trigger: ATCCTGAAGGAACTGCTCTCAAAGAAGCACGCTGCC...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCACTTGCTGTGCAGATaGCTCTGTCTTCTCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTHLLCR*LCLLTR Trigger: GCGAGTGAGAAGACAGAGTCATCTGCACAGCAAGTG...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCATAGGAGGGAGCCTTaGTGCCTTTGGCTCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTHRREP*CLWLKT Trigger: AGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATG...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATCGGGACACTGCCACTTaGTGTGCAGATGACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPTPIILNRDTTPKRARNRDTAT*CADDSV Trigger: GACAGAGTCATCTGCACAGCAAGTGGCAGTGTCCCG...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCCAGGGGGTGGTGGATTaGCAGGGGCCAGTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSQGVVD*QGPVVK Trigger: CTTTACAACTGGCCCCTGCCAATCCACCACCCCCTG...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGAGCCTTGCTGCCTTTaGCTCAAGACTCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSEPCCL*LKTPRR Trigger: CCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTC...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTTCGTGGGGGTTTGATTaGGCGGCCACTCTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVSWGFD*AATLSA Trigger: CGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGA...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATAGGTCCTGGTTCCAGTaGCTCATCTGGCATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPTPIILNRDTTPKRARNRSWFQ*LIWHLG Trigger: GCCAAGATGCCAGATGAGCCACTGGAACCAGGACCT...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTTTAGATATTGGGCCCTaGGACAGGGCAGCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATAQGALCQAYPHSHPYPLDIGP*DRAASC Trigger: ACAACTGGCTGCCCTGTCCCAGGGCCCAATATCTAA...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCACTTGGGCTTAGATATTaGGCCCTGGGACAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSLGLRY*ALGQGS Trigger: GCTGCCCTGTCCCAGGGCCCAATATCTAAGCCCAAG...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| 3UTR CAA 72 bp | TGCTGTTGCGAGTCAGGCAAGTCTTTTCGTGGGGGTTaGATTGGGCGGCCACTCTCTCTGCGCATAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCCESGKSFRGG*IGRPLSLRIGG Trigger: CCCTCCTATGCGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCTGACTCGCAACAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR GCA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAAGGAGGGAGCCTTGCTaGCTTTGGCTCAAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQRREPC*LWLKTP Trigger: GGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCT...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCCGGGACACTGCCACTTaGTGTGCAGATGACTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSRDTAT*CADDSV Trigger: GACAGAGTCATCTGCACAGCAAGTGGCAGTGTCCCG...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCCCCAGGGAGCTTGTaGGGAGTCACGTTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQSPGSL*GVTFCS Trigger: GCTGCAAAACGTGACTCCCCACAAGCTCCCTGGGGA...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCGAGCCTTGCTGCCTTTaGCTCAAGACTCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLVNPGGKAVETGRGPGSEPCCL*LKTPRR Trigger: CCTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTC...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTTCGTGGGGGTTTGATTaGGCGGCCACTCTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EEDLVNPGGKAVETGRGPSWGFD*AATLSA Trigger: CGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGA...AGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATCCTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTTAGATATTGGGCCCTaGGACAGGGCAGCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPTPIILNRDTTPKRARNLDIGP*DRAASC Trigger: ACAACTGGCTGCCCTGTCCCAGGGCCCAATATCTAA...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTCTTGGGCTGAGGTaGGCGAGGTGCCCTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PIILNRDTTPKRARNSIVFLGLR*ARCPRP Trigger: GGGCCTAGGGCACCTCGCCCACCTCAGCCCAAGAAA...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTGAGACAGCAGGCACCTaGTGGGCACTGGTAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVETAGT*WALVIL Trigger: CAGTATTACCAGTGCCCATCAGGTGCCTGCTGTCTC...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCAGCTGGAGGCGCTGCTaGTACAGCAAGGAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DTTPKRARNSIVFCPCPCSWRRC*YSKEWG Trigger: CCCCCACTCCTTGCTGTATCAGCAGCGCCTCCAGCT...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | AACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCAGTGGCTCAGGCAGCGTGCTTCTTTaGGAGCAGTTCCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPGGKAVETGRGPGSSGSGSVLL*EQFLQD Trigger: ATCCTGAAGGAACTGCTCTCAAAGAAGCACGCTGCC...TGAGCCACTGGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173204.2 ENSMUST00000235313.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCACACTTGCTGTGCAGATaGCTCTGTCTTCTCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSHLLCR*LCLLTR Trigger: GCGAGTGAGAAGACAGAGTCATCTGCACAGCAAGTG...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCCTGCCGGAATGGCCATaGAAACTGATGCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSLPEWP*KLMLPQ Trigger: CTGTGGAAGCATCAGTTTGCATGGCCATTCCGGCAG...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCACTGCCGGAATGGCCATaGAAACTGATGCTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSLPEWP*KLMLPQ Trigger: CTGTGGAAGCATCAGTTTGCATGGCCATTCCGGCAG...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR GCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTCTCTGGTGTTGCTGTTaGGAGTCAGGCAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATAQGALCQAYPHSHPYPLWCCC*ESGKSF Trigger: AAAAGACTTGCCTGACTCGCAACAGCAACACCAGAG...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAGCAGCAAACTCCTGTaGATCCCGGTAGTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSSSKLL*IPVVTV Trigger: AACCGTGACTACCGGGATGCACAGGAGTTTGCTGCT...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCATCCTGCAACTTTCGTaGCATAGCCACAACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTILQLS*HSHNIV Trigger: CACGATGTTGTGGCTATGGCACGAAAGTTGCAGGAT...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCGTACAGAAGCCATTGTaGGGCTCTCAAATCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTVQKPL*GSQIPH Trigger: ATGAGGGATTTGAGAGCCCCACAATGGCTTCTGTAC...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAACTGGCTTTTTGGGATTaGACACCTCAGGGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQLAFWD*TPQGVV Trigger: CACCACCCCCTGAGGTGTCCAATCCCAAAAAGCCAG...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGGAGTGCTGCTAACTTaGCCCCCTTCTTATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSGVLLT*PPSYGC Trigger: ACAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCC...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGAGTGCTGCTAACTTaGCCCCCTTCTTATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSGVLLT*PPSYGC Trigger: ACAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCC...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCACTGGTAATACTGCCCTaGAGTGCTGCTAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSLVILP*SAANLA Trigger: GGCCAAGTTAGCAGCACTCCAGGGCAGTATTACCAG...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTGGTAGGTATTTCAGGTaGTGGTGTATACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATAQGALCQAYPHSHPYPGRYFR*WCIQGC Trigger: ACAGCCCTGTATACACCACCACCTGAAATACCTACC...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTAGGCAAGTCTTTTCGTaGGGGTTTGATTGGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVRQVFS*GFDWAA Trigger: GGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCT...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCAGGCAAGTCTTTTCGTaGGGGTTTGATTGGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLVNPGGKAVETGRGPGSRQVFS*GFDWAA Trigger: GGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCT...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCCTTTCTTAGAGCTCTaGTGTTGCTGTTGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTPFLEL*CCCCES Trigger: TGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGG...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTTTCCAGTGGCTCATCTaGCATCTTGGCATAGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ATAQGALCQAYPHSHPYPFQWLI*HLGIAK Trigger: TTTCGCTATGCCAAGATGCCAGATGAGCCACTGGAA...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAAGGTCCTGGTTCCAGTaGCTCATCTGGCATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQRSWFQ*LIWHLG Trigger: GCCAAGATGCCAGATGAGCCACTGGAACCAGGACCT...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTAGGTCCTGGTTCCAGTaGCTCATCTGGCATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVRSWFQ*LIWHLG Trigger: GCCAAGATGCCAGATGAGCCACTGGAACCAGGACCT...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCATTAGATATTGGGCCCTaGGACAGGGCAGCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSLDIGP*DRAASC Trigger: ACAACTGGCTGCCCTGTCCCAGGGCCCAATATCTAA...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCAGTGGGAAGGACAGGTaGAGCTGTCTTTTGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTSGKDR*SCLLRL Trigger: AAGTCTCAAAAGACAGCTCCACCTGTCCTTCCCACT...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCCAGAATCATAGCCAGTaGGAAGGACAGGTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSQNHSQ*EGQVEL Trigger: CAGCTCCACCTGTCCTTCCCACTGGCTATGATTCTG...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCGGCAGCGTGCTTCTTTaGGAGCAGTTCCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLVNPGGKAVETGRGPGSGSVLL*EQFLQD Trigger: ATCCTGAAGGAACTGCTCTCAAAGAAGCACGCTGCC...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173204.2 ENSMUST00000235313.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGTTCCCTGGCTTGGATaGTATGTACTACTCGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSVPWLG*YVLLDP Trigger: TGGGTCGAGTAGTACATATCATCCAAGCCAGGGAAC...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGTCACCACAAGCTCTTaGTCCTCTTGTGGCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSVTTSS*SSCGMD Trigger: ATCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGAC...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTGGGGGTCCAGCAGAATaGAGGGACTTAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVGGPAE*RDLRRG Trigger: TCCTCTTCTTAAGTCCCTGCATTCTGCTGGACCCCC...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCATTAGAGCTCTGGTGTTaGTGTTGCGAGTCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSLELWC*CCESGK Trigger: CTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAA...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR GCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCTTAGAGCTCTGGTGTTaGTGTTGCGAGTCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSLELWC*CCESGK Trigger: CTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAA...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTAGCAGCAAACTCCTGTaGATCCCGGTAGTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVSSKLL*IPVVTV Trigger: AACCGTGACTACCGGGATGCACAGGAGTTTGCTGCT...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR GCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGCTACCCCCACCACCTaGTTTCTTAGATTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSATPTT*FLRFLG Trigger: CCCAAGAAATCTAAGAAAGCAGGTGGTGGGGGTAGC...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR CCA 90 bp | CTGGAGGACTCTGAAGAGGATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTCTGGCTTTTTGGGATTaGACACCTCAGGGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEDSEEDLVNPGGKAVETLAFWD*TPQGVV Trigger: CACCACCCCCTGAGGTGTCCAATCCCAAAAAGCCAG...AGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTCCTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
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| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCTCGTGGGGGTTTGATTaGGCGGCCACTCTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFSWGFD*AATLSA Trigger: CGCAGAGAGAGTGGCCGCCCAATCAAACCCCCACGA...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAACTCTGAAGAGGATTTaGTCAACCCAGGAGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSTLKRI*STQEAR Trigger: CCTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGT...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR CCA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCTGCTACTTTCCTCACTaGAGGACTCTGAAGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QLQLRGLYARPIPTPTHTCYFPH*RTLKRI Trigger: AATCCTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCA...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGAGTGGGAAGGACAGGTaGAGCTGTCTTTTGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: DEEASQQGKVGKGGSGVRSGKDR*SCLLRL Trigger: AAGTCTCAAAAGACAGCTCCACCTGTCCTTCCCACT...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR CCA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTTCTCATCATAACTCATaGGCCTGCTTTCTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATAQGALCQAYPHSHPYPSHHNS*ACFLPP Trigger: AGGAGGAAGAAAGCAGGCCCATGAGTTATGATGAGA...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
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| 3UTR CAA 72 bp | ATCTTTCCCTGCCAACCCGACTCAAGCAGCCCTCTCTaGAAACAAGTGGGGATGACCTTAGGGATCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IFPCQPDSSSPL*KQVGMTLGICA Trigger: GGCACAGATCCCTAAGGTCATCCCCACTTGTTTCAAGAGAGGGCTGCTTGAGTCGGGTTGGCAGGGAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173204.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTGAAGAGGAGAAGAGATaGCTGATGGGTGGGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVEEEKR*LMGGEC Trigger: ACATTCCCCACCCATCAGTCATCTCTTCTCCTCTTC...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR GCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCAGGAGGGAGCCTTGCTaGCTTTGGCTCAAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DTTPKRARNSIVFCPCPCRREPC*LWLKTP Trigger: GGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCT...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR GCA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATTAGAGCTCTGGTGTTaGTGTTGCGAGTCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQLELWC*CCESGK Trigger: CTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAA...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR GCA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCTTAGAGCTCTGGTGTTaGTGTTGCGAGTCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLVNPGGKAVETGRGPGSLELWC*CCESGK Trigger: CTTGCCTGACTCGCAACAGCAACACCAGAGCTCTAA...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR GCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCATCCTGCAACTTTCGTaGCATAGCCACAACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSILQLS*HSHNIV Trigger: CACGATGTTGTGGCTATGGCACGAAAGTTGCAGGAT...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
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| CDS-3UTR GCA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCTGAGGTGGGCGAGGTaGCCTAGGCCCCTTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: TTPKRARNSIVFCPCPCLLRWAR*PRPLII Trigger: GATGATAAGGGGCCTAGGGCACCTCGCCCACCTCAG...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCTCCCCAGGGAGCTTGTaGGGAGTCACGTTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFSPGSL*GVTFCS Trigger: GCTGCAAAACGTGACTCCCCACAAGCTCCCTGGGGA...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGTACAGAAGCCATTGTaGGGCTCTCAAATCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSVQKPL*GSQIPH Trigger: ATGAGGGATTTGAGAGCCCCACAATGGCTTCTGTAC...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTACTGGCTTTTTGGGATTaGACACCTCAGGGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIILNRDTTPKRARNSIVLAFWD*TPQGVV Trigger: CACCACCCCCTGAGGTGTCCAATCCCAAAAAGCCAG...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
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| CDS-3UTR CCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTAGGTATTTCAGGTaGTGGTGTATACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSGRYFR*WCIQGC Trigger: ACAGCCCTGTATACACCACCACCTGAAATACCTACC...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCCTTGGGCTTAGATATTaGGCCCTGGGACAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFLGLRY*ALGQGS Trigger: GCTGCCCTGTCCCAGGGCCCAATATCTAAGCCCAAG...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAGTGGGAAGGACAGGTaGAGCTGTCTTTTGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSSGKDR*SCLLRL Trigger: AAGTCTCAAAAGACAGCTCCACCTGTCCTTCCCACT...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTTTCTTGGCAAGGGGCTaGGCTGGAGGCGCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCFLARG*AGGAAD Trigger: ATCAGCAGCGCCTCCAGCTCAGCCCCTTGCCAAGAA...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTCCTCCTCAGAGTCTaGGCTTTCACTCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PIILNRDTTPKRARNSIVFLLRV*AFTLLL Trigger: GAGGAGGAGAGTGAAAGCTCAGACTCTGAGGAGGAA...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGAGGACCACGGCTACACACCCCCAGCCTTACCACATAGCTTAAATAAACACTTGCTGTGCAGATaGCTCTGTCTTCTCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WREDHGYTPPALPHSLNKHLLCR*LCLLTR Trigger: GCGAGTGAGAAGACAGAGTCATCTGCACAGCAAGTG...TTTATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTTCATCACTACCTTGTaGAGGTACTGCAGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DEEASQQGKVGKGGSGVRFITTL*RYCSWF Trigger: AAACCAACTGCAGTACCTGCACAAGGTAGTGATGAA...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR GCA 90 bp | CGAAACTCAAACACATCCTGCAACTTTCGTGCCATAGCCACAACATCGTGGTCTAGGAGGGAGCCTTGCTaGCTTTGGCTCAAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNSNTSCNFRAIATTSWSRREPC*LWLKTP Trigger: GGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCT...AGACCACGATGTTGTGGCTATGGCACGAAAGTTGCAGGATGTGTTTGAGTTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR GCA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCCTCTGGTGTTGCTGTTaGGAGTCAGGCAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLVNPGGKAVETGRGPGSLWCCC*ESGKSF Trigger: AAAAGACTTGCCTGACTCGCAACAGCAACACCAGAG...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR GCA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCTTGCAGTGCTTTAACTaGTCTGACAGCTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSLQCFN*SDSFPF Trigger: GAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAA...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCTGAAGAGGATTTGTCCCCAGGGAGCTTGTaGGGAGTCACGTTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEELSLLLSSLEDSEEDLSPGSL*GVTFCS Trigger: GCTGCAAAACGTGACTCCCCACAAGCTCCCTGGGGA...CAAATCCTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | CGAAACTCAAACACATCCTGCAACTTTCGTGCCATAGCCACAACATCGTGGTCTCAGGGGGTGGTGGATTaGCAGGGGCCAGTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNSNTSCNFRAIATTSWSQGVVD*QGPVVK Trigger: CTTTACAACTGGCCCCTGCCAATCCACCACCCCCTG...AGACCACGATGTTGTGGCTATGGCACGAAAGTTGCAGGATGTGTTTGAGTTTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAGCTCCTCTTGTGGCATaGATGCTACTTTCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQAPLVA*MLLSVG Trigger: TCCTACAGAAAGTAGCATCCATGCCACAAGAGGAGC...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCATCTCATCATAACTCATaGGCCTGCTTTCTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPIILNRDTTPKRARNSSHHNS*ACFLPP Trigger: AGGAGGAAGAAAGCAGGCCCATGAGTTATGATGAGA...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCTTCCTCCTCAGAGTCTaGGCTTTCACTCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFFLLRV*AFTLLL Trigger: GAGGAGGAGAGTGAAAGCTCAGACTCTGAGGAGGAA...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTGCAGCCAGTTGTTCATaGACTGCCCGAAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCAASCS*TARSCS Trigger: GGAGCAGCTTCGGGCAGTTCATGAACAACTGGCTGC...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAGGACCACGGCTACACACCCCCAGCCTTACCACATAGCTTAAATAAAGTCACCACAAGCTCTTaGTCCTCTTGTGGCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WREDHGYTPPALPHSLNKVTTSS*SSCGMD Trigger: ATCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGAC...TTTATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTAGGAGGGAGCCTTGCTaGCTTTGGCTCAAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCRREPC*LWLKTP Trigger: GGGAGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCT...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCCATAGGAGGGAGCCTTaGTGCCTTTGGCTCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFHRREP*CLWLKT Trigger: AGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATG...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTTTGCAGTGCTTTAACTaGTCTGACAGCTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVLQCFN*SDSFPF Trigger: GAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAA...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCTTGCAGTGCTTTAACTaGTCTGACAGCTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLVNPGGKAVETGRGPGSLQCFN*SDSFPF Trigger: GAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAA...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173204.2 ENSMUST00000235313.2 |
||
| CDS-3UTR GCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCAGCAGCAAACTCCTGTaGATCCCGGTAGTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFSSKLL*IPVVTV Trigger: AACCGTGACTACCGGGATGCACAGGAGTTTGCTGCT...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTGGTAATACTGCCCTaGAGTGCTGCTAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DTTPKRARNSIVFCPCPCLVILP*SAANLA Trigger: GGCCAAGTTAGCAGCACTCCAGGGCAGTATTACCAG...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGACTCTGAAGAGGATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTCCTTTCTTAGAGCTCTaGTGTTGCTGTTGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEDSEEDLVNPGGKAVETPFLEL*CCCCES Trigger: TGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGG...AGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCCAGAATCATAGCCAGTaGGAAGGACAGGTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFQNHSQ*EGQVEL Trigger: CAGCTCCACCTGTCCTTCCCACTGGCTATGATTCTG...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| 3UTR CAA 72 bp | TTCTCACTCGCTTTCTTGGGAGGCTTTTTGGTGGAGTaGAGCTGTCCACTGACATCCTGCAACCGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLAFLGGFLVE*SCPLTSCNRFS Trigger: AGAGAAGCGGTTGCAGGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCCTCCCAAGAAAGCGAGTGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CAA 72 bp | GACTCTGTCTTCTCACTCGCTTTCTTGGGAGGCTTTTaGGTGGAGTTGAGCTGTCCACTGACATCCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSVFSLAFLGGF*VELSCPLTSCN Trigger: GTTGCAGGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCCTCCCAAGAAAGCGAGTGAGAAGACAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR TCA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTGGCAGCGTGCTTCTTTaGGAGCAGTTCCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTPKRARNSIVFCPCPCLGSVLL*EQFLQD Trigger: ATCCTGAAGGAACTGCTCTCAAAGAAGCACGCTGCC...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCGTTCCCTGGCTTGGATaGTATGTACTACTCGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTTPKRARNSIVFCPCPCVPWLG*YVLLDP Trigger: TGGGTCGAGTAGTACATATCATCCAAGCCAGGGAAC...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CGAAACTCAAACACATCCTGCAACTTTCGTGCCATAGCCACAACATCGTGGTCTCATAGGAGGGAGCCTTaGTGCCTTTGGCTCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RNSNTSCNFRAIATTSWSHRREP*CLWLKT Trigger: AGTCTTGAGCCAAAGGCAGCAAGGCTCCCTCCTATG...AGACCACGATGTTGTGGCTATGGCACGAAAGTTGCAGGATGTGTTTGAGTTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTACTCTGGTGTTGCTGTTaGGAGTCAGGCAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PIILNRDTTPKRARNSIVLWCCC*ESGKSF Trigger: AAAAGACTTGCCTGACTCGCAACAGCAACACCAGAG...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTAATCCTGCAACTTTCGTaGCATAGCCACAACATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIILNRDTTPKRARNSIVILQLS*HSHNIV Trigger: CACGATGTTGTGGCTATGGCACGAAAGTTGCAGGAT...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCTGGCTTTTTGGGATTaGACACCTCAGGGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCLAFWD*TPQGVV Trigger: CACCACCCCCTGAGGTGTCCAATCCCAAAAAGCCAG...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CCA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGGGACAATATCATCGGTaGGCTTGTTATAAATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DEEASQQGKVGKGGSGVRGQYHR*ACYKCN Trigger: GTTACATTTATAACAAGCCCACCGATGATATTGTCC...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTAGCTCCTCTTGTGGCATaGATGCTACTTTCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PIILNRDTTPKRARNSIVAPLVA*MLLSVG Trigger: TCCTACAGAAAGTAGCATCCATGCCACAAGAGGAGC...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTGGAGTGCTGCTAACTTaGCCCCCTTCTTATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTPKRARNSIVFCPCPCLGVLLT*PPSYGC Trigger: ACAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCC...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTAGGCAAGTCTTTTCGTaGGGGTTTGATTGGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCRQVFS*GFDWAA Trigger: GGCCGCCCAATCAAACCCCCACGAAAAGACTTGCCT...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCACTCTGAAGAGGATTTaGTCAACCCAGGAGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTTPKRARNSIVFCPCPCTLKRI*STQEAR Trigger: CCTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGT...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCAGAATCATAGCCAGTaGGAAGGACAGGTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTPKRARNSIVFCPCPCLQNHSQ*EGQVEL Trigger: CAGCTCCACCTGTCCTTCCCACTGGCTATGATTCTG...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCATAATCCTCTGGGGATaGCTATCCATGGGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFIILWG*LSMGCM Trigger: CATGCAGCCCATGGATAGCCATCCCCAGAGGATTAT...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| 3UTR CAA 72 bp | GAAGTCCCAAAGCCAGGATGGCTGAGTGTAGTAGCATaGCTACCCCCACCACCTGCTTTCTTAGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVPKPGWLSVVA*LPPPPAFLDFL Trigger: CAAGAAATCTAAGAAAGCAGGTGGTGGGGGTAGCAATGCTACTACACTCAGCCATCCTGGCTTTGGGACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR TCA 90 bp | TTACATGTTAGACTCAAGAAAGAAAAGACAGTCTTGGGGCCAACTGGAGAGGTGGAGACAGCAGGCACCTaGTGGGCACTGGTAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHVRLKKEKTVLGPTGEVETAGT*WALVIL Trigger: CAGTATTACCAGTGCCCATCAGGTGCCTGCTGTCTC...CACCTCTCCAGTTGGCCCCAAGACTGTCTTTTCTTTCTTGAGTCTAACATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTGGCAGCGTGCTTCTTTaGGAGCAGTTCCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCGSVLL*EQFLQD Trigger: ATCCTGAAGGAACTGCTCTCAAAGAAGCACGCTGCC...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTGGGGGTCCAGCAGAATaGAGGGACTTAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCGGPAE*RDLRRG Trigger: TCCTCTTCTTAAGTCCCTGCATTCTGCTGGACCCCC...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTCTGGTGTTGCTGTTaGGAGTCAGGCAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DTTPKRARNSIVFCPCPCLWCCC*ESGKSF Trigger: AAAAGACTTGCCTGACTCGCAACAGCAACACCAGAG...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAGGACCACGGCTACACACCCCCAGCCTTACCACATAGCTTAAATAAATTGCAGTGCTTTAACTaGTCTGACAGCTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WREDHGYTPPALPHSLNKLQCFN*SDSFPF Trigger: GAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAA...TTTATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCGCTCCTCTTGTGGCATaGATGCTACTTTCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFAPLVA*MLLSVG Trigger: TCCTACAGAAAGTAGCATCCATGCCACAAGAGGAGC...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAGGACCACGGCTACACACCCCCAGCCTTACCACATAGCTTAAATAAAAGGTATTTCAGGTGGTaGTGTATACAGGGCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: WREDHGYTPPALPHSLNKRYFRW*CIQGCM Trigger: CATACAGCCCTGTATACACCACCACCTGAAATACCT...TTTATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCGGTAGGTATTTCAGGTaGTGGTGTATACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFGRYFR*WCIQGC Trigger: ACAGCCCTGTATACACCACCACCTGAAATACCTACC...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATGCTACTTTCCTCACTaGAGGACTCTGAAGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PIILNRDTTPKRARNSIVCYFPH*RTLKRI Trigger: AATCCTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCA...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGAGGACCACGGCTACACACCCCCAGCCTTACCACATAGCTTAAATAAATTCATCACTACCTTGTaGAGGTACTGCAGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WREDHGYTPPALPHSLNKFITTL*RYCSWF Trigger: AAACCAACTGCAGTACCTGCACAAGGTAGTGATGAA...TTTATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR GCA 90 bp | TTACATGTTAGACTCAAGAAAGAAAAGACAGTCTTGGGGCCAACTGGAGAGGTGGGGGGTCCAGCAGAATaGAGGGACTTAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHVRLKKEKTVLGPTGEVGGPAE*RDLRRG Trigger: TCCTCTTCTTAAGTCCCTGCATTCTGCTGGACCCCC...CACCTCTCCAGTTGGCCCCAAGACTGTCTTTTCTTTCTTGAGTCTAACATGTAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCTGAAGAGGATTTTGCAGTGCTTTAACTaGTCTGACAGCTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQRNSHCYFPHWRTLKRILQCFN*SDSFPF Trigger: GAAAGGGAAGCTGTCAGAGCAGTTAAAGCACTGCAA...AATCCTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173204.2 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCAGGTATTTCAGGTGGTaGTGTATACAGGGCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFRYFRW*CIQGCM Trigger: CATACAGCCCTGTATACACCACCACCTGAAATACCT...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCCTTTCTTAGAGCTCTaGTGTTGCTGTTGCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPKRARNSIVFCPCPCLPFLEL*CCCCES Trigger: TGACTCGCAACAGCAACACCAGAGCTCTAAGAAAGG...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCTGCTACTTTCCTCACTaGAGGACTCTGAAGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFCYFPH*RTLKRI Trigger: AATCCTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCA...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR TCA 90 bp | TTACATGTTAGACTCAAGAAAGAAAAGACAGTCTTGGGGCCAACTGGAGAGGTGGTTCCCTGGCTTGGATaGTATGTACTACTCGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHVRLKKEKTVLGPTGEVVPWLG*YVLLDP Trigger: TGGGTCGAGTAGTACATATCATCCAAGCCAGGGAAC...CACCTCTCCAGTTGGCCCCAAGACTGTCTTTTCTTTCTTGAGTCTAACATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCGGACAATATCATCGGTaGGCTTGTTATAAATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DTTPKRARNSIVFCPCPCGQYHR*ACYKCN Trigger: GTTACATTTATAACAAGCCCACCGATGATATTGTCC...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTGGACAATATCATCGGTaGGCTTGTTATAAATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNRDTTPKRARNSIVFCGQYHR*ACYKCN Trigger: GTTACATTTATAACAAGCCCACCGATGATATTGTCC...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGACAGGGCAGCCAGTaGTTCATGAACTGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAGQGSQ*FMNCPK Trigger: CTTCGGGCAGTTCATGAACAACTGGCTGCCCTGTCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCGGTCACCACAAGCTCTaGCTCCTCTTGTGGCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGGHHKL*LLLWHG Trigger: TCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGACC...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGTCACCACAAGCTCTaGCTCCTCTTGTGGCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAGHHKL*LLLWHG Trigger: TCCATGCCACAAGAGGAGCAAGAGCTTGTGGTGACC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGAGTGCTGCTAACTaGGCCCCCTTCTTATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAWSAAN*APFLWL Trigger: CAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCCA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCGGAGCCTTGCTGCCTTaGGCTCAAGACTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RESGEGWFRGPVLRSLPAGALLP*AQDSQE Trigger: CTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCC...GGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCACCCGTCCTGGCTTTTaGGGATTGGACACCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RESGEGWFRGPVLRSLPATRPGF*GLDTSG Trigger: CCCTGAGGTGTCCAATCCCAAAAAGCCAGGACGGGT...GGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTCTCCATCTTCCGCTaGACAGTGCTGAGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAFSIFR*TVLRSM Trigger: CATGGACCTCAGCACTGTCAAGCGGAAGATGGAGAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCGGCTTTTTGGTGGAGTaGAGCTGTCCACTGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAGFLVE*SCPLTS Trigger: GGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCC...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCTGAGTGTAGTAGCATaGCTACCCCCACCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RESGEGWFRGPVLRSLPALSVVA*LPPPPA Trigger: AGCAGGTGGTGGGGGTAGCAATGCTACTACACTCAG...GGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCCCACTTTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTGGCTTCTTGGGAGGCTTTTaGGTGGAGTTGAGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RVVQGSGPAEPSCPIWPGFLGGF*VELSCP Trigger: TGGACAGCTCAACTCCACCAAAAAGCCTCCCAAGAA...GCCAGGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTCTTGGGAGGCTTTTaGGTGGAGTTGAGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAFLGGF*VELSCP Trigger: TGGACAGCTCAACTCCACCAAAAAGCCTCCCAAGAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATCCTGGCTTTTTGGGATaGGACACCTCAGGGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPTPIILNRDTTPKRARNPGFLG*DTSGGG Trigger: ACCACCCCCTGAGGTGTCCAATCCCAAAAAGCCAGG...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATGGACAGGGCAGCCAGTaGTTCATGAACTGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CPTPIILNRDTTPKRARNGQGSQ*FMNCPK Trigger: CTTCGGGCAGTTCATGAACAACTGGCTGCCCTGTCC...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTCCCCAGGTAACTTATaGATATCCAGGCTTAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLASPGNL*ISRLNC Trigger: ACAGTTAAGCCTGGATATCAATAAGTTACCTGGGGA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCCTAAGTGTGGACGGCTaGAGTGTTTCAAAATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLALSVDG*SVSKSI Trigger: GATTGATTTTGAAACACTCAAGCCGTCCACACTTAG...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGGTGGTTCAGGGGTCCGGTCCTGCGGAGCCTTCCTGCCCCATCTGGCCTTTTCAAGTCTCCTCTaGATAGTACCCATGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GKGGSGVRSCGAFLPHLAFSSLL*IVPMSI Trigger: TATGGACATGGGTACTATCAAGAGGAGACTTGAAAA...GGCCAGATGGGGCAGGAAGGCTCCGCAGGACCGGACCCCTGAACCACCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAGGAGCCTTGCTGCCTTaGGCTCAAGACTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQGALLP*AQDSQE Trigger: CTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCC...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCGCTCTGGTGTTGCTGTaGCGAGTCAGGCAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QLQLRGLYARPIPTPTHTALVLL*RVRQVF Trigger: AAAGACTTGCCTGACTCGCAACAGCAACACCAGAGC...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCTTCTCCATCTTCCGCTaGACAGTGCTGAGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QLQLRGLYARPIPTPTHTFSIFR*TVLRSM Trigger: CATGGACCTCAGCACTGTCAAGCGGAAGATGGAGAA...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCCTGACTCTGAAGAGGATTaGGTCAACCCAGGAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ATAQGALCQAYPHSHPYPDSEED*VNPGGK Trigger: CTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTC...AGGGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCGGCTTTTTGGTGGAGTaGAGCTGTCCACTGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QLQLRGLYARPIPTPTHTGFLVE*SCPLTS Trigger: GGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCC...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATCTGGTACAGAAGCCATaGTGGGGCTCTCAAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CPTPIILNRDTTPKRARNLVQKP*WGSQIP Trigger: AGGGATTTGAGAGCCCCACAATGGCTTCTGTACCAG...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCCTGGCTTTTTGGGATaGGACACCTCAGGGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVPGFLG*DTSGGG Trigger: ACCACCCCCTGAGGTGTCCAATCCCAAAAAGCCAGG...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAGTGCAGGTACTGCAGTaGGTTTGTTACCCGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTPIILNRDTTPKRARNSVQVLQ*VCYPSW Trigger: CCAGGACGGGTAACAAACCAACTGCAGTACCTGCAC...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGGCCTTCATCACTACCTaGTGCAGGTACTGCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DEEASQQGKVGKGGSGVRAFITT*CRYCSW Trigger: CCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGC...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCTGGAGTGCTGCTAACTaGGCCCCCTTCTTATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSWSAAN*APFLWL Trigger: CAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCCA...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGACTCTGAAGAGGATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGAGCCTTGCTGCCTTaGGCTCAAGACTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEDSEEDLVNPGGKAVETGALLP*AQDSQE Trigger: CTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCC...AGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTCCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CAA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGCTTAGAGCTCTGGTGTaGCTGTTGCGAGTCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DEEASQQGKVGKGGSGVRLRALV*LLRVRQ Trigger: TTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAG...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAGGACAGGGCAGCCAGTaGTTCATGAACTGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQGQGSQ*FMNCPK Trigger: CTTCGGGCAGTTCATGAACAACTGGCTGCCCTGTCC...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATGGCTTTTTGGTGGAGTaGAGCTGTCCACTGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: CPTPIILNRDTTPKRARNGFLVE*SCPLTS Trigger: GGATGTCAGTGGACAGCTCAACTCCACCAAAAAGCC...ATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGCTCTGGTGTTGCTGTaGCGAGTCAGGCAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSALVLL*RVRQVF Trigger: AAAGACTTGCCTGACTCGCAACAGCAACACCAGAGC...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCTGAGTGTAGTAGCATaGCTACCCCCACCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVLSVVA*LPPPPA Trigger: AGCAGGTGGTGGGGGTAGCAATGCTACTACACTCAG...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGGTTCCCTGGTACAGAAGCCATaGTGGGGCTCTCAAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DLVNPGGKAVETGRGPGSLVQKP*WGSQIP Trigger: AGGGATTTGAGAGCCCCACAATGGCTTCTGTACCAG...GGAACCAGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTAACCCGTCCTGGCTTTTaGGGATTGGACACCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PIILNRDTTPKRARNSIVTRPGF*GLDTSG Trigger: CCCTGAGGTGTCCAATCCCAAAAAGCCAGGACGGGT...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGAGGACCACGGCTACACACCCCCAGCCTTACCACATAGCTTAAATAAAACCCGTCCTGGCTTTTaGGGATTGGACACCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WREDHGYTPPALPHSLNKTRPGF*GLDTSG Trigger: CCCTGAGGTGTCCAATCCCAAAAAGCCAGGACGGGT...TTTATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCGGAGCCTTGCTGCCTTaGGCTCAAGACTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFGALLP*AQDSQE Trigger: CTCCTGGGAGTCTTGAGCCAAAGGCAGCAAGGCTCC...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCTTAGAGCTCTGGTGTaGCTGTTGCGAGTCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVLRALV*LLRVRQ Trigger: TTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAG...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGAAGCCAGTTCCTCCTTaGTTTTTCCCACAGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DEEASQQGKVGKGGSGVRKPVPP*FFPQVS Trigger: GGAAACCTGTGGGAAAAACAAAGGAGGAACTGGCTT...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCATTCTTGGGAGGCTTTTaGGTGGAGTTGAGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTPIILNRDTTPKRARNSFLGGF*VELSCP Trigger: TGGACAGCTCAACTCCACCAAAAAGCCTCCCAAGAA...TGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCACCCGTCCTGGCTTTTaGGGATTGGACACCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFTRPGF*GLDTSG Trigger: CCCTGAGGTGTCCAATCCCAAAAAGCCAGGACGGGT...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCTCCTCTTCCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTGCCTTCATCACTACCTaGTGCAGGTACTGCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPLPQRNSHCYFPHWRTAFITT*CRYCSW Trigger: CCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGC...AGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGGAAGAGGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAGGATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTGGTAGAGGTCCTGCTCTGGTGTTGCTGTaGCGAGTCAGGCAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EEDLVNPGGKAVETGRGPALVLL*RVRQVF Trigger: AAAGACTTGCCTGACTCGCAACAGCAACACCAGAGC...AGGACCTCTACCAGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATCCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGACTCTGAAGAGGATTTGGTCAACCCAGGAGGCAAGGCAGTAGAGACTCTTAGAGCTCTGGTGTaGCTGTTGCGAGTCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LEDSEEDLVNPGGKAVETLRALV*LLRVRQ Trigger: TTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAG...AGTCTCTACTGCCTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTCCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTACAGCTCAGGGGGCTTTATGCCAGGCCTATCCCCACTCCCACCCATACCTCCCCAGGTAACTTATaGATATCCAGGCTTAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLQLRGLYARPIPTPTHTSPGNL*ISRLNC Trigger: ACAGTTAAGCCTGGATATCAATAAGTTACCTGGGGA...GGTATGGGTGGGAGTGGGGATAGGCCTGGCATAAAGCCCCCTGAGCTGTAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCAAGCCAGTTCCTCCTTaGTTTTTCCCACAGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSKPVPP*FFPQVS Trigger: GGAAACCTGTGGGAAAAACAAAGGAGGAACTGGCTT...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS CCA 90 bp | GTGGATTGGCAGGGGCCAGTTGTAAAGCTGGTACAGAAGCCATTGTaGGGCTCTCAAATCCCTCATACAGCAGAGAAGGCTTTCGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VDWQGPVVKLVQKPL*GSQIPHTAEKAFES Trigger: GGATTCGAAAGCCTTCTCTGCTGTATGAGGGATTTGAGAGCCCCACAATGGCTTCTGTACCAGCTTTACAACTGGCCCCTGCCAATCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
||
| CDS CCA 90 bp | TGCTTCCACAGAGCCTTCATCACTACCTTGTGCAGGTACTGCAGTTaGTTTGTTACCCGTCCTGGCTTTTTGGGATTGGACACCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CFHRAFITTLCRYCS*FVTRPGFLGLDTSG Trigger: CCCTGAGGTGTCCAATCCCAAAAAGCCAGGACGGGTAACAAACCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGCTCTGTGGAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCGTGCAGGTACTGCAGTaGGTTTGTTACCCGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFVQVLQ*VCYPSW Trigger: CCAGGACGGGTAACAAACCAACTGCAGTACCTGCAC...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCTGAAGAGGATTGTGCAGGTACTGCAGTaGGTTTGTTACCCGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQRNSHCYFPHWRTLKRIVQVLQ*VCYPSW Trigger: CCAGGACGGGTAACAAACCAACTGCAGTACCTGCAC...AATCCTCTTCAGAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTAGCCTTCATCACTACCTaGTGCAGGTACTGCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PIILNRDTTPKRARNSIVAFITT*CRYCSW Trigger: CCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGC...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTCTCCATCTTCCGCTaGACAGTGCTGAGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PIILNRDTTPKRARNSIVFSIFR*TVLRSM Trigger: CATGGACCTCAGCACTGTCAAGCGGAAGATGGAGAA...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCGGCTAAGTGTGGACGGCTaGAGTGTTTCAAAATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: DEEASQQGKVGKGGSGVRLSVDG*SVSKSI Trigger: GATTGATTTTGAAACACTCAAGCCGTCCACACTTAG...CCGGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCTTCCTCAGAGGAACTCTCACTGCTACTTTCCTCACTGGAGGACTCAAGAAGCTAAGAATTTaGGCCACCGTGGTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLRGTLTATFLTGGLKKLRI*ATVVLS Trigger: GGAGAGGACCACGGTGGCCAAAATTCTTAGCTTCTT...GAGTCCTCCAGTGAGGAAAGTAGCAGTGAGAGTTCCTCTGAGGAAGAGGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCCTGGTACAGAAGCCATaGTGGGGCTCTCAAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFLVQKP*WGSQIP Trigger: AGGGATTTGAGAGCCCCACAATGGCTTCTGTACCAG...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTGTGCAGGTACTGCAGTaGGTTTGTTACCCGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTPKRARNSIVFCPCPCLVQVLQ*VCYPSW Trigger: CCAGGACGGGTAACAAACCAACTGCAGTACCTGCAC...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCGACTCTGAAGAGGATTaGGTCAACCCAGGAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFDSEED*VNPGGK Trigger: CTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTC...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCTGAGTGTAGTAGCATaGCTACCCCCACCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTPKRARNSIVFCPCPCLLSVVA*LPPPPA Trigger: AGCAGGTGGTGGGGGTAGCAATGCTACTACACTCAG...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CCACCCCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAAGACTTTTTAGGTAGCTaGTTGCTACTTCCTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPPSSSTGTPHPRGLGIQDFLGS*LLLPPE Trigger: TTCCGGAGGAAGTAGCAACAAGCTACCTAAAAAGTC...TTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGGGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGGTGAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTGACTTTTTAGGTAGCTaGTTGCTACTTCCTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WRGEMKKRHSKGKWGRVVDFLGS*LLLPPE Trigger: TTCCGGAGGAAGTAGCAACAAGCTACCTAAAAAGTC...AACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTCACCCCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GAGATGAAGAAGCGTCACAGCAAGGGAAAGTGGGGAAGGGTGGTTCAGGGGTCCCTAAGTGTGGACGGCTaGAGTGTTTCAAAATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: EMKKRHSKGKWGRVVQGSLSVDG*SVSKSI Trigger: GATTGATTTTGAAACACTCAAGCCGTCCACACTTAG...GGACCCCTGAACCACCCTTCCCCACTTTCCCTTGCTGTGACGCTTCTTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CGAAACTCAAACACATCCTGCAACTTTCGTGCCATAGCCACAACATCGTGGTCTGGCAGCATGAGAAGCTaGACAGTGCTGAGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RNSNTSCNFRAIATTSWSGSMRS*TVLRSM Trigger: CATGGACCTCAGCACTGTCAAGCTTCTCATGCTGCC...AGACCACGATGTTGTGGCTATGGCACGAAAGTTGCAGGATGTGTTTGAGTTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235313.2 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTGCCTTCATCACTACCTaGTGCAGGTACTGCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTPKRARNSIVFCPCPCLAFITT*CRYCSW Trigger: CCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGC...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000154232.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTTGGAGTGCTGCTAACTaGGCCCCCTTCTTATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILNRDTTPKRARNSIVFCWSAAN*APFLWL Trigger: CAGCCATAAGAAGGGGGCCAAGTTAGCAGCACTCCA...ACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCTTAGAGCTCTGGTGTaGCTGTTGCGAGTCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TTPKRARNSIVFCPCPCLLRALV*LLRVRQ Trigger: TTGCCTGACTCGCAACAGCAACACCAGAGCTCTAAG...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | TTACATGTTAGACTCAAGAAAGAAAAGACAGTCTTGGGGCCAACTGGAGAGGTGGACTCTGAAGAGGATTaGGTCAACCCAGGAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHVRLKKEKTVLGPTGEVDSEED*VNPGGK Trigger: CTTGCCTCCTGGGTTGACCAAATCCTCTTCAGAGTC...CACCTCTCCAGTTGGCCCCAAGACTGTCTTTTCTTTCTTGAGTCTAACATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTCGACTTTTTAGGTAGCTaGTTGCTACTTCCTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PHPRGLGIQSYFVHVPAFDFLGS*LLLPPE Trigger: TTCCGGAGGAAGTAGCAACAAGCTACCTAAAAAGTC...GAAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCCTTAAGCCAGTTCCTCCTTaGTTTTTCCCACAGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTPKRARNSIVFCPCPCLKPVPP*FFPQVS Trigger: GGAAACCTGTGGGAAAAACAAAGGAGGAACTGGCTT...AAGGCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | CCCATCATCCTCAACAGGGACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTCAAGTCTCCTCTaGATAGTACCCATGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PIILNRDTTPKRARNSIVFSSLL*IVPMSI Trigger: TATGGACATGGGTACTATCAAGAGGAGACTTGAAAA...TACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTCCCTGTTGAGGATGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCTCCCCAGGTAACTTATaGATATCCAGGCTTAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: DTTPKRARNSIVFCPCPCSPGNL*ISRLNC Trigger: ACAGTTAAGCCTGGATATCAATAAGTTACCTGGGGA...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS-3UTR CAA 90 bp | GACACCACACCCAAGAGGGCTAGGAATTCAATCGTATTTTGTCCATGTCCCTGCTTTTCAAGTCTCCTCTaGATAGTACCCATGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: DTTPKRARNSIVFCPCPCFSSLL*IVPMSI Trigger: TATGGACATGGGTACTATCAAGAGGAGACTTGAAAA...GCAGGGACATGGACAAAATACGATTGAATTCCTAGCCCTCTTGGGTGTGGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 |
||
| CDS CCA 72 bp | GAATTTTGGCCACCGTGGTCCTCTCCCAACCAGGGGTaGGAATCGGCAAACCCAGCTTCACAGCGTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: EFWPPWSSPNQG*ESANPASQRPQ Trigger: CTGTGGACGCTGTGAAGCTGGGTTTGCCGATTCCCACCCCTGGTTGGGAGAGGACCACGGTGGCCAAAATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154232.9 |
||
| CDS CCA 72 bp | CAGGGGCCAGTTGTAAAGCTGGTACAGAAGCCATTGTaGGGCTCTCAAATCCCTCATACAGCAGAGAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGPVVKLVQKPL*GSQIPHTAEKA Trigger: AGCCTTCTCTGCTGTATGAGGGATTTGAGAGCCCCACAATGGCTTCTGTACCAGCTTTACAACTGGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
||
| CDS CAA 72 bp | TGGCAGGGGCCAGTTGTAAAGCTGGTACAGAAGCCATaGTGGGGCTCTCAAATCCCTCATACAGCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WQGPVVKLVQKP*WGSQIPHTAEK Trigger: CTTCTCTGCTGTATGAGGGATTTGAGAGCCCCACAATGGCTTCTGTACCAGCTTTACAACTGGCCCCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
||
| CDS CAA 90 bp | GTGGTGGATTGGCAGGGGCCAGTTGTAAAGCTGGTACAGAAGCCATaGTGGGGCTCTCAAATCCCTCATACAGCAGAGAAGGCTTTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVDWQGPVVKLVQKP*WGSQIPHTAEKAFE Trigger: TTCGAAAGCCTTCTCTGCTGTATGAGGGATTTGAGAGCCCCACAATGGCTTCTGTACCAGCTTTACAACTGGCCCCTGCCAATCCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025193.14 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
||
| CDS CAA 90 bp | ATGCTTCCACAGAGCCTTCATCACTACCTTGTGCAGGTACTGCAGTaGGTTTGTTACCCGTCCTGGCTTTTTGGGATTGGACACCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MLPQSLHHYLVQVLQ*VCYPSWLFGIGHLR Trigger: CCTGAGGTGTCCAATCCCAAAAAGCCAGGACGGGTAACAAACCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGCTCTGTGGAAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
||
| CDS GCA 72 bp | TTCCACAGAGCCTTCATCACTACCTTGTGCAGGTACTaGAGTTGGTTTGTTACCCGTCCTGGCTTTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FHRAFITTLCRY*SWFVTRPGFLG Trigger: TCCCAAAAAGCCAGGACGGGTAACAAACCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGCTCTGTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
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| CDS CCA 72 bp | AGAGCCTTCATCACTACCTTGTGCAGGTACTGCAGTTaGTTTGTTACCCGTCCTGGCTTTTTGGGATTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RAFITTLCRYCS*FVTRPGFLGLD Trigger: GTCCAATCCCAAAAAGCCAGGACGGGTAACAAACCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
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| CDS CAA 72 bp | CAGAGCCTTCATCACTACCTTGTGCAGGTACTGCAGTaGGTTTGTTACCCGTCCTGGCTTTTTGGGATTGGA | + |
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Preference number: 6 (lower is better) Translates to: QSLHHYLVQVLQ*VCYPSWLFGIG Trigger: TCCAATCCCAAAAAGCCAGGACGGGTAACAAACCAACTGCAGTACCTGCACAAGGTAGTGATGAAGGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000025193.14 ENSMUST00000095347.13 ENSMUST00000114242.9 ENSMUST00000151986.2 ENSMUST00000154232.9 |
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