Pregenerated sensors for BRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022387Ensembl transcript IDs: ENSMUST00000109380.8, ENSMUST00000109381.9
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTaGTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: SAVRSSVSHHPLQAR*SESLTSLRLQLTQP Trigger: AGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTGAGCTCCCGGCTGGCTaGGGCTTTGGCCACCGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ARCSESLTSLRLQLTQPPELPAG*GFGHRL Trigger: AAGGCGGTGGCCAAAGCCTCAGCCAGCCGGGAGCTC...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTGCTGGGAGGCACGCCTaGAGGAGCCAGGGCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ARCSESLTSLRLQLTQPPAGRHA*RSQGRA Trigger: TGCTCTGCCCTGGCTCCTGCAGGCGTGCCTCCCAGC...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCCCTCGGCACCTGCAGTaGGACCCCAACACCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPPRHLQ*DPNTTL Trigger: CAGTGTGGTGTTGGGGTCCCACTGCAGGTGCCGAGG...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGCTGGCTGAGGCTTTaGCCACCGCCTTTGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SESLTSLRLQLTQPPSDAGWLRL*PPPLLE Trigger: TTCCAGCAAAGGCGGTGGCCAAAGCCTCAGCCAGCC...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAAGCTTATCAACACTATaGACAGAGCTCCCGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SESLTSLRLQLTQPPSDASLSTL*TELPAG Trigger: GCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCT...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCGCTCCCACACCAAGTTaGATTTTTATGTGCCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPAPTPS*IFMCLY Trigger: ATACAGGCACATAAAAATTCAACTTGGTGTGGGAGC...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTCAGACCCTCCTCACTTaGAAAGCCAAGACCAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCQTLLT*KAKTRW Trigger: CCATCTGGTCTTGGCTTTGCAAGTGAGGAGGGTCTG...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTAAAGCCAAGACCAGATaGTTTCATAGAAAACTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TKSKYTQASRVYNLATHSKAKTR*FHRKLG Trigger: TCCAAGTTTTCTATGAAACCATCTGGTCTTGGCTTT...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGGTTTCATAGAAAACTaGGAAGTGAAACCTCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAGFIEN*EVKPPL Trigger: GAGGGGAGGTTTCACTTCCAAGTTTTCTATGAAACC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAACAGACCCTCCTCACTaGCAAAGCCAAGACCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SESLTSLRLQLTQPPSDATDPPH*QSQDQM Trigger: CATCTGGTCTTGGCTTTGCAAGTGAGGAGGGTCTGT...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR CCA 72 bp | GTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTaGCTGAGGCTTTGGCCACCGCCTTTGCTGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: VQLINTMDRAPG*LRLWPPPLLET Trigger: GGTTTCCAGCAAAGGCGGTGGCCAAAGCCTCAGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| 3UTR CCA 72 bp | CAACAGACCCTCCTCACTTGCAAAGCCAAGACCAGATaGTTTCATAGAAAACTTGGAAGTGAAACCTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QQTLLTCKAKTR*FHRKLGSETSP Trigger: AGGGGAGGTTTCACTTCCAAGTTTTCTATGAAACCATCTGGTCTTGGCTTTGCAAGTGAGGAGGGTCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCACCTCTCGCCGGGCCTaGCTCAGGACAACCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPTSRRA*LRTTPP Trigger: GGGAGGGGTTGTCCTGAGGCAGGCCCGGCGAGAGGT...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCGACTGCAGGCTGGACTaGAGCCGCCGCAACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPDCRLD*SRRNRG Trigger: TCCCCTGTTGCGGCGGCTCCAGTCCAGCCTGCAGTC...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTGGAGCCTGGCTGTGCTaGTGGCTCAGCTTGTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARCSESLTSLRLQLTQPPGAWLC*WLSLFR Trigger: CCGAAACAAGCTGAGCCAGCAGCACAGCCAGGCTCC...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGCACTACTGGCGAGGGTaGGCTCTGGAGGGTGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVHYWRG*ALEGVR Trigger: GCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTG...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGGTAGCCGCTGCACTTaGCCCATACCACCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAGSRCT*PIPPSG Trigger: CCCTGAAGGTGGTATGGGCCAAGTGCAGCGGCTACC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGGGGAAGGGCACTGGCTaGCGCCGGTGTGCCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSEGKGTG*RRCAVG Trigger: ACCCACGGCACACCGGCGTCAGCCAGTGCCCTTCCC...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGTCTGGGACTGCAGGCTaGACTGGAGCCGCCGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVSGTAG*TGAAAT Trigger: TGTTGCGGCGGCTCCAGTCCAGCCTGCAGTCCCAGA...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGGTGGGCCCTGTTGGCTaGGTCCAGCAACCTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVVGPVG*VQQPVH Trigger: GTGGACAGGTTGCTGGACCCAGCCAACAGGGCCCAC...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTCCCCGTCCATGCAGATaGAGCAAACAGCGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAPRPCR*SKQRPH Trigger: ATGAGGACGCTGTTTGCTGCATCTGCATGGACGGGG...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTGTGTCCGCTTACCAGTaGGCTCTGAGTGCAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARCSESLTSLRLQLTQPPVSAYQ*ALSASA Trigger: AGCACTTGCACTCAGAGCGCACTGGTAAGCGGACAC...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTAGCCGCTGGACTTCATaGAGCAGGTCAGGTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQASRWTS*SRSGPT Trigger: AGTTGGACCTGACCTGCTCCATGAAGTCCAGCGGCT...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTCGGCTGACTTCTCGATaGACTTGTAGTACACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQARLTSR*TCSTQG Trigger: CCCCTGTGTACTACAAGTTCATCGAGAAGTCAGCCG...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGTTTTGGTCCCTAGCTaGGGAGAAGTTGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAVLVPS*GEVGWV Trigger: AACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAAC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGTCGCGCAGCCTCACTaGAGCTCTATAAAACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAVAQPH*SSIKHG Trigger: ACCGTGTTTTATAGAGCTGCAGTGAGGCTGCGCGAC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTAAAGCCTCCCGTGCCTaGCCCTGTGGGCGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCKASRA*PCGRSL Trigger: CAGGCTCCGCCCACAGGGGCAGGCACGGGAGGCTTT...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTGTGTGCCGTGGGTGCTaGGCAGGACTTCATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARCSESLTSLRLQLTQPPVCRGC*AGLHFS Trigger: AGAAAAATGAAGTCCTGCCCAGCACCCACGGCACAC...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCGGCAAAGCCAACCTCTaGGATCCACAGGGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPGKANL*DPQGTY Trigger: GTATGTGCCCTGTGGATCCCAGAGGTTGGCTTTGCC...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAASSAE*PPDSQS Trigger: GGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTCCTGTGGGCGGAGCCTaGCTGTGCTGCTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCPVGGA*LCCWLS Trigger: GCTGAGCCAGCAGCACAGCCAGGCTCCGCCCACAGG...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTTTACTCTGCTCGGGGTaGAGTTCTACTGGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQALLCSG*SSTGLR Trigger: CCTCAACCCAGTAGAACTCCACCCCGAGCAGAGTAA...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGCACATCGCCACTACTaGCGAGGGTGGGCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDAAHRHY*RGWALE Trigger: CTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGC...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGTGGCCAGGCACTCGTaGCATCTTGGGGTCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAVARHS*HLGVNN Trigger: ATTATTGACCCCAAGATGCCACGAGTGCCTGGCCAC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAACTGAGGTCACTGGCTaGCTCCCCATGGACCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDATEVTG*LPMDPA Trigger: AGCCGGGTCCATGGGGAGCCAGCCAGTGACCTCAGT...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCGTCCAGCTCCTCGGCTaGCTTCTCGATGAACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPVQLLG*LLDELV Trigger: TACAAGTTCATCGAGAAGTCAGCCGAGGAGCTGGAC...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | GTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGAGGCTTTGGCCAGCGGCGCAGGGATGGTaGCGCCATTGTGGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQLINTMDRAPGWLRLWPAAQGW*RHCGGQ Trigger: CTGGCCACCACAATGGCGTCACCATCCCTGCGCCGC...TGGCCAAAGCCTCAGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTTCTATCAAGGACTGCTaGTCACCCTGCTTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARCSESLTSLRLQLTQPPSIKDC*SPCFWF Trigger: GAACCAGAAGCAGGGTGAGCAGCAGTCCTTGATAGA...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTTCATGTCGCAGCCGCTaGCAGTACTTTAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQASCRSR*QYFSFS Trigger: AGAGAAGCTAAAGTACTGGCAGCGGCTGCGACATGA...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGACCTTTTCCTTGGCTaGAGTAGAGTCTCCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQADLFLG*SRVSNL Trigger: GAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGTACTCCGTGAGCCGCTaGACTTCATGGAGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVYSVSR*TSWSRS Trigger: TGACCTGCTCCATGAAGTCCAGCGGCTCACGGAGTA...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGTGTGTCCGGGGCCAGTaGAGCAGCCTCATCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVCVRGQ*SSLIFK Trigger: TTTGAAGATGAGGCTGCTCCACTGGCCCCGGACACA...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGTGACGCCATTGTGGTaGCCAGGCACTCGTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDAVTPLW*PGTRGI Trigger: GATGCCACGAGTGCCTGGCCACCACAATGGCGTCAC...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCCGTCAATGGGCTCAATaGATACCGTGTTGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPRQWAQ*IPCWQS Trigger: GCTTTGCCAACACGGTATTCATTGAGCCCATTGACG...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTTCATTTTCTCTCTGCTaGGTGTTTCTCTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQASFSLC*VFLWDC Trigger: GCAGTCCCAGAGAAACACGCAGCAGAGAGAAAATGA...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGCCTCCGGGTACAGCCTaGAGGCGTGTGGACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSEPPGTA*RRVDIT Trigger: TGTGATGTCCACACGCCTCCAGGCTGTACCCGGAGG...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCAGGGATCAAAAATACTaGTCCGATGCAAGCGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPRDQKY*SDASAL Trigger: AAGGGCGCTTGCATCGGATCAGTATTTTTGATCCCT...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAAATCTGGTACCTCCTTaGGACTCACGGGCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDANLVPP*DSRAGQ Trigger: TTGCCCAGCCCGTGAGTCTCAAGGAGGTACCAGATT...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGCCGGTGTGCCGTGGGTaGTGGGCAGGACTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSEPVCRG*WAGLHF Trigger: AAAATGAAGTCCTGCCCAGCACCCACGGCACACCGG...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTGCTGCGTGTTTCTCTaGGACTGCAGGCTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSECCVFL*DCRLDW Trigger: CCAGTCCAGCCTGCAGTCCCAGAGAAACACGCAGCA...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGAGTGGGCTGTTGCTaGAACAAATACTGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARCSESLTSLRLQLTQPPRVGCC*NKYWIQ Trigger: CTGAATCCAGTATTTGTTCCAGCAACAGCCCACTCT...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTTGCCCGTTTACTCCGTaGGCCGCTGGACTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCCPFTP*AAGLHG Trigger: TCCATGAAGTCCAGCGGCTCACGGAGTAAACGGGCA...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAGTTCTACTGGGTTaGGGGTTGGTGGTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDAGVLLG*GLVVLS Trigger: ACTCAGAACCACCAACCCTCAACCCAGTAGAACTCC...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGCATCCTTTGAGCTTGTaGGTAGGTCAGTGTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVHPLSL*VGQCFS Trigger: CGAGAAACACTGACCTACGCACAAGCTCAAAGGATG...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTCGGTCTTCTAGCGTGTaGCTTCGCACAAGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCRSSSV*LRTRAG Trigger: ACCTGCCCTTGTGCGAAGGCACACGCTAGAAGACCG...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAATAACGTTGCTGTTCTaGCACTCCCCGTCCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDAITLLF*HSPSMQ Trigger: CTGCATGGACGGGGAGTGCCAGAACAGCAACGTTAT...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTGCCTGGCTGTGCTGCTaGCTCAGCTTGTTTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCAWLCC*LSLFRR Trigger: TCTCCGAAACAAGCTGAGCCAGCAGCACAGCCAGGC...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGGGGGTGGAGTTCTACTaGGTTGAGGGTTGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSEGVEFY*VEGWWF Trigger: GAACCACCAACCCTCAACCCAGTAGAACTCCACCCC...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGCTTCTCCTCGGACTTaGTCTGCATGTGTTCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDAASPRT*SACVHR Trigger: TCGGTGAACACATGCAGACCAAGTCCGAGGAGAAGC...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTTCACCTGCTCTCTCTTaGGTTTCTCCCGCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCSPALS*VSPACA Trigger: TGCGCAAGCGGGAGAAACTCAAGAGAGAGCAGGTGA...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTCGCTCTGAGTGCAAGTaGTATGTGATTCATTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTPGPVLRVPHVPQARSECK*YVIHYQ Trigger: TTGATAATGAATCACATAGCACTTGCACTCAGAGCG...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCAGAAGAGAACAGAAGTaGGTCTGTTTACATCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPRREQK*VCLHRL Trigger: CAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCT...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTTGAGACTCACGGGCTaGGCAAAGATCTTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSELRLTG*AKIFAG Trigger: CCCTGCAAAGATCTTTGCCCAGCCCGTGAGTCTCAA...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCGGTCATCTTCTAGTATaGTCTCCAAGGGATCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVCHTTHSRPGAPSPSRPGHLLV*SPRDQK Trigger: TTTTTGATCCCTTGGAGATCATACTAGAAGATGACC...GGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | GTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGAGGCTTTGGCCATTTGCTTTGTGGCACTaGATGCAGGCACCCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQLINTMDRAPGWLRLWPFALWH*MQAPTP Trigger: AGGCGTGGGTGCCTGCATTCAGTGCCACAAAGCAAA...TGGCCAAAGCCTCAGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTGCTCCACCTTCACCTaGTCTCTCTTGAGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSECSTFT*SLLSFS Trigger: GGAGAAACTCAAGAGAGAGCAGGTGAAGGTGGAGCA...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCACCAGTGCGCTCTGAGTaGAAGTGCTATGTGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDAPVRSE*KCYVIH Trigger: ATGAATCACATAGCACTTGCACTCAGAGCGCACTGG...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTTTACACTTTTCGATTTaGAGAAGAGAACAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARCSESLTSLRLQLTQPPLHFSI*RREQKC Trigger: GCACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAA...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGGTTCTTGGCAGACTTTaGGGGGCTTACACTTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSEVLGRL*GAYTFR Trigger: TCGAAAAGTGTAAGCCCCCCAAAGTCTGCCAAGAAC...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAAAAATACTGATCCGATaGAAGCGCCCTTCGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SESLTSLRLQLTQPPSDAKILIR*KRPSIS Trigger: AGAAATCGAAGGGCGCTTGCATCGGATCAGTATTTT...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCATCATTTTCTCTCTaGTGCGTGTTTCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAVRSSVSHHPLQARCSESSFSL*CVFLWD Trigger: GTCCCAGAGAAACACGCAGCAGAGAGAAAATGATGA...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTCCGTGCCTGCCCCTGTaGGCGGAGCCTGGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSPCLPL*AEPGCA Trigger: AGCACAGCCAGGCTCCGCCCACAGGGGCAGGCACGG...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | AATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGGCGAGGGTGGGCTCTaGAGGGTGTCCGCTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NIQTCTAYQHYGQSSRLAGEGGL*RVSAYQ Trigger: CTGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCC...AGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | AATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTAGGGGGCCTCCTGGGTaGAGAGGGAGGACTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: NIQTCTAYQHYGQSSRLARGPPG*RGRTVL Trigger: GAGTACAGTCCTCCCTCTGCACCCAGGAGGCCCCCT...AGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | AATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTACACAGGGGGCCTCCTaGGTGCAGAGGGAGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NIQTCTAYQHYGQSSRLATQGAS*VQREDC Trigger: ACAGTCCTCCCTCTGCACCCAGGAGGCCCCCTGTGT...AGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | CTGAACAATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCCCTGGGCCCCCTCCTaGCTCCTGTTCGCTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTCTAYQHYGQSSRPWAPS*LLFASS Trigger: GCTAGAAGCGAACAGGAGCCAGGAGGGGGCCCAGGG...CCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | CTGAACAATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCCTCTTCCAGGCCAATaGTCTCCACCTCTCGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTCTAYQHYGQSSRPLPGQ*SPPLAG Trigger: CCCGGCGAGAGGTGGAGAGCATTGGCCTGGAAGAGG...CCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGAGGCTTTGGCCACAGACAAAAAGGTTTTaGTCCCTAGCTGAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQLINTMDRAPGWLRLWPQTKRF*SLAEEK Trigger: CTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTG...TGGCCAAAGCCTCAGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | AATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTATGGTGACGCCATTGTaGTGGCCAGGCACTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NIQTCTAYQHYGQSSRLAMVTPL*WPGTRG Trigger: GCCACGAGTGCCTGGCCACCACAATGGCGTCACCAT...AGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTAGGGCACATACCACGTaGCCCCAGCGGTCATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSRAHTT*PQRSSS Trigger: AGACGATGACCGCTGGGGCCACGTGGTATGTGCCCT...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | CTGAACAATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGTCATGTGGGCCCTGTTaGCTGGGTCCAGCAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTCTAYQHYGQSSRSCGPC*LGPATC Trigger: ACAGGTTGCTGGACCCAGCCAACAGGGCCCACATGA...CCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | GTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGAGGCTTTGGCCAACTCTGTTGTTTTTGTaGCGCTTAGTTCTTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQLINTMDRAPGWLRLWPTLLFL*RLVLKQ Trigger: TTGCTTAAGAACTAAGCGTCACAAAAACAACAGAGT...TGGCCAAAGCCTCAGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTCACGGGGAAGAAGGATaGCTCGCTGCAGAACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSHGEEG*LAAEPR Trigger: TCGAGGTTCTGCAGCGAGGCATCCTTCTTCCCCGTG...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | AATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGTCAATAATCAGTGCTaGGTAGGAGGGGTAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIQTCTAYQHYGQSSRLAVNNQC*VGGVAA Trigger: AGCGGCTACCCCTCCTACCCAGCACTGATTATTGAC...AGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | AATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTCTTACCAGTGCGCTCTaGGTGCAAGTGCTATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NIQTCTAYQHYGQSSRLALTSAL*VQVLCD Trigger: ATCACATAGCACTTGCACTCAGAGCGCACTGGTAAG...AGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | CTGAACAATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTTTGTGGCACTGAATaGAGGCACCCACGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTCTAYQHYGQSSRLCGTE*RHPRLS Trigger: AGAAAGGCGTGGGTGCCTGCATTCAGTGCCACAAAG...CCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | CTGAACAATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGCGGAGTCTCCACATGTaGTCCTCGACCTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTCTAYQHYGQSSRRSLHM*SSTFSL Trigger: CAAGGAAAAGGTCGAGGAGCACATGTGGAGACTCCG...CCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTGGGGTCAATAATCAGTaGTGGGTAGGAGGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSGVNNQ*WVGGVA Trigger: GGCTACCCCTCCTACCCAGCACTGATTATTGACCCC...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTGCTGCAGAACCTCGATaGCATCGTCCTTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSAAEPR*HRPFLL Trigger: GAGGAGGAAAGGACGATGCCATCGAGGTTCTGCAGC...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTCAAGAGGGACCATCTTaGACTTGGGAAGCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSQEGPS*TWEATA Trigger: GGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTG...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTCATCGTCTGTCTTTTTaGAGGCACCGCCCTTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSHRLSF*RHRPYS Trigger: CGAATAAGGGCGGTGCCTTCAAAAAGACAGACGATG...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTTCATCTATCAAGGACTaGTGCTCACCCTGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSSSIKD*CSPCFW Trigger: CCAGAAGCAGGGTGAGCAGCAGTCCTTGATAGATGA...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR TCA 90 bp | CTGAACAATATACAAACATGTACAGCTTATCAACACTATGGACAGAGCTCCCGGAGGTTTTTATACCCTTaGGCTTCTAGCCGTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTCTAYQHYGQSSRRFLYP*ASSRFL Trigger: GAGGAAACGGCTAGAAGCTCAAGGGTATAAAAACCT...CCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTACATGTTTGTATATTGTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTTGCTGGAACAAATACTaGATTCAGATGCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSCWNKY*IQMHSA Trigger: GGCGCTGTGCATCTGAATCCAGTATTTGTTCCAGCA...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTGTGATCCAAATAATCTaGTACCTCCTTGAGACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKSKYTQASRVYNLATHSVIQII*YLLETH Trigger: GTGAGTCTCAAGGAGGTACCAGATTATTTGGATCAC...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | GCTCCGCCACTGCGGAGGCCGCCGCCGCCGGCACATCGCCACTACTaGCGAGGGTGGGCTCTGGAGGGTGTCCGCTTACCAGTGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: APPLRRPPPPAHRHY*RGWALEGVRLPVRS Trigger: AGAGCGCACTGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGGCCTCCGCAGTGGCGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | CTGCGGAGGCCGCCGCCGCCGGCACATCGCCACTACTGGCGAGGGTaGGCTCTGGAGGGTGTCCGCTTACCAGTGCGCTCTGAGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRRPPPPAHRHYWRG*ALEGVRLPVRSECK Trigger: CTTGCACTCAGAGCGCACTGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGGCCTCCGCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | GCCTCCTGGGTGCAGAGGGAGGACTGTACTCCACAATCCGCACCTTaGGCTCGGGAAGGGCACTGGCTGACGCCGGTGTGCCGTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASWVQREDCTPQSAP*AREGHWLTPVCRGC Trigger: GCACCCACGGCACACCGGCGTCAGCCAGTGCCCTTCCCGAGCCCAAGGTGCGGATTGTGGAGTACAGTCCTCCCTCTGCACCCAGGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | GGCCGCCGCCGCCGGCACATCGCCACTACTGGCGAGGGTGGGCTCTaGAGGGTGTCCGCTTACCAGTGCGCTCTGAGTGCAAGTGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: GRRRRHIATTGEGGL*RVSAYQCALSASAM Trigger: CATAGCACTTGCACTCAGAGCGCACTGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | TGGGTCGCTCAGGCAGGTGCATTCCCGAGGCCTCTTCCAGGCCAATaGTCTCCACCTCTCGCCGGGCCTGCCTCAGGACAACCCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WVAQAGAFPRPLPGQ*SPPLAGPASGQPLP Trigger: AGGGAGGGGTTGTCCTGAGGCAGGCCCGGCGAGAGGTGGAGAGCATTGGCCTGGAAGAGGCCTCGGGAATGCACCTGCCTGAGCGACCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | CAGCAACCTGTCCACCTCTTCCCAGGAGAAGGGCCGCCGAGGGGCTaGGATGGGTCGCTCAGGCAGGTGCATTCCCGAGGCCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQPVHLFPGEGPPRG*DGSLRQVHSRGLFQ Trigger: CTGGAAGAGGCCTCGGGAATGCACCTGCCTGAGCGACCCATCGCAGCCCCTCGGCGGCCCTTCTCCTGGGAAGAGGTGGACAGGTTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | ACCTGTCCACCTCTTCCCAGGAGAAGGGCCGCCGAGGGGCTGCGATaGGTCGCTCAGGCAGGTGCATTCCCGAGGCCTCTTCCAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TCPPLPRRRAAEGLR*VAQAGAFPRPLPGQ Trigger: TTGGCCTGGAAGAGGCCTCGGGAATGCACCTGCCTGAGCGACCCATCGCAGCCCCTCGGCGGCCCTTCTCCTGGGAAGAGGTGGACAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGGGATGGTGACGCCATaGTGGTGGCCAGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAGMVTP*WWPGTR Trigger: ACGAGTGCCTGGCCACCACAATGGCGTCACCATCCC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGTCGTACTCTACCTCGTaGTCCAGCTCCTCGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVSYSTS*SSSSAD Trigger: GTCAGCCGAGGAGCTGGACAACGAGGTAGAGTACGA...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTTCCTCGACCTTTTCCTaGGCTGCAGTAGAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTPGPVLRVPHVPQASSTFS*AAVESP Trigger: TGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGA...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTCACCATCCTTTGAGCTaGTGCGTAGGTCAGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAHHPLS*CVGQCF Trigger: GAAACACTGACCTACGCACAAGCTCAAAGGATGGTG...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGCTCATGTGGGCCCTGTaGGCTGGGTCCAGCAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAVRSSVSHHPLQARCSELMWAL*AGSSNL Trigger: CAGGTTGCTGGACCCAGCCAACAGGGCCCACATGAG...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTTCGCAGAGTGGGCTGTaGCTGGAACAAATACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ARCSESLTSLRLQLTQPPSQSGL*LEQILD Trigger: ATCCAGTATTTGTTCCAGCAACAGCCCACTCTGCGA...AGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS TCA 90 bp | ACTGTACTCCACAATCCGCACCTTGGGCTCGGGAAGGGCACTGGCTaGCGCCGGTGTGCCGTGGGTGCTGGGCAGGACTTCATTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVLHNPHLGLGKGTG*RRCAVGAGQDFIFL Trigger: AAGAAAAATGAAGTCCTGCCCAGCACCCACGGCACACCGGCGTCAGCCAGTGCCCTTCCCGAGCCCAAGGTGCGGATTGTGGAGTACAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS TCA 90 bp | TTTCGATTTGCAGAAGAGAACAGAAGTGCGTCTGTTTACATCGCTTaGTGGCTCCGCCACTGCGGAGGCCGCCGCCGCCGGCACATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRFAEENRSASVYIA*WLRHCGGRRRRHIA Trigger: GGCGATGTGCCGGCGGCGGCGGCCTCCGCAGTGGCGGAGCCATCAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCTGCAAATCGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGCAGAAGAGTATAACGTaGCTGTTCTGGCACTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVQKSIT*LFWHSP Trigger: CGGGGAGTGCCAGAACAGCAACGTTATACTCTTCTG...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTTCATCGTCTGTCTTTTaGAAGGCACCGCCCTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTPGPVLRVPHVPQASSSVF*KAPPLF Trigger: GAATAAGGGCGGTGCCTTCAAAAAGACAGACGATGA...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGTTGAGTTTCTCCCGCTaGCGCAGCAGCTCAATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVLSFSR*RSSSIS Trigger: GCTAATTGAGCTGCTGCGCAAGCGGGAGAAACTCAA...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTCCCTCACGTCCCTCAGGCTGTAGACCTGACCGTTTaGACTGAGCTTTCTTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTPGPVLRVPHVPQAVDLTV*TELSFR Trigger: TCGAAAAGAAAGCTCAGTCAAAACGGTCAGGTCTAC...AGCCTGAGGGACGTGAGGGACTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGCTAGCTGAGGAGAAGTaGGCTGGGTTTCAGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVLAEEK*AGFQCS Trigger: AGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAG...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | CGCACCTTGGGCTCGGGAAGGGCACTGGCTGACGCCGGTGTGCCGTaGGTGCTGGGCAGGACTTCATTTTTCTTTTTGACTCTGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RTLGSGRALADAGVP*VLGRTSFFFLTLLF Trigger: AAACAACAGAGTCAAAAAGAAAAATGAAGTCCTGCCCAGCACCCACGGCACACCGGCGTCAGCCAGTGCCCTTCCCGAGCCCAAGGTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | TCCAACTTGTCCAGAAGTTCTCTCAGCTGCTCCTCCAAGCTCATGTaGGCCCTGTTGGCTGGGTCCAGCAACCTGTCCACCTCTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLSRSSLSCSSKLM*ALLAGSSNLSTSSQ Trigger: CTGGGAAGAGGTGGACAGGTTGCTGGACCCAGCCAACAGGGCCCACATGAGCTTGGAGGAGCAGCTGAGAGAACTTCTGGACAAGTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | TCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGCACTCGTGGCATCTaGGGGTCAATAATCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SESLTSLRLQLTQPPSDAGTRGI*GSIISA Trigger: AGCACTGATTATTGACCCCAAGATGCCACGAGTGCC...TGCATCACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGAGCTTCTCCTCGGACTaGGTCTGCATGTGTTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: SAVRSSVSHHPLQARCSESFSSD*VCMCSP Trigger: CGGTGAACACATGCAGACCAAGTCCGAGGAGAAGCT...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGAGGCTTTGGCCAGGGACCATCTTGGACTaGGGAAGCCACTGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQLINTMDRAPGWLRLWPGTILD*GSHCQL Trigger: GAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCC...TGGCCAAAGCCTCAGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTCCAAGAGGGACCATCTaGGACTTGGGAAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCPRGTI*DLGSHC Trigger: GCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGG...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS TCA 90 bp | ATGTCACTGAGGTCACTGGCTGGCTCCCCATGGACCCGGCTCAGATaGTTCATGGCTCGATCAAATGCAATCCGCACAGCCTTCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MSLRSLAGSPWTRLR*FMARSNAIRTAFRM Trigger: CATCCGGAAGGCTGTGCGGATTGCATTTGATCGAGCCATGAATCATCTGAGCCGGGTCCATGGGGAGCCAGCCAGTGACCTCAGTGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | TTCATGGAGCAGGTCAGGTCCAACTTGTCCAGAAGTTCTCTCAGCTaGTCCTCCAAGCTCATGTGGGCCCTGTTGGCTGGGTCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FMEQVRSNLSRSSLS*SSKLMWALLAGSSN Trigger: GTTGCTGGACCCAGCCAACAGGGCCCACATGAGCTTGGAGGAGCAGCTGAGAGAACTTCTGGACAAGTTGGACCTGACCTGCTCCATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | TCCACTTCGGAGTCTCCACATGTGCTCCTCGACCTTTTCCTTGGCTaGAGTAGAGTCTCCAACCTCGGAAGGACTTCCTCCGCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: STSESPHVLLDLFLG*SRVSNLGRTSSAVS Trigger: GGACACAGCGGAGGAAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTCCGAAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109380.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCTGTTAGATCAAGTGTGTCACACCACCCACTCCAGGCCCGGTGCTCCGAGTGGAGTTCTACTGGGTaGAGGGTTGGTGGTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVRSSVSHHPLQARCSEWSSTG*RVGGSE Trigger: CTCAGAACCACCAACCCTCAACCCAGTAGAACTCCA...CTCGGAGCACCGGGCCTGGAGTGGGTGGTGTGACACACTTGATCTAACAGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GTACAGCTTATCAACACTATGGACAGAGCTCCCGGCTGGCTGAGGCTTTGGCCAGTCTGTTTACATCGCTaGATGGCTCCGCCACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VQLINTMDRAPGWLRLWPVCLHR*MAPPLR Trigger: CCGCAGTGGCGGAGCCATCAAGCGATGTAAACAGAC...TGGCCAAAGCCTCAGCCAGCCGGGAGCTCTGTCCATAGTGTTGATAAGCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | TGGCTCCCCATGGACCCGGCTCAGATGATTCATGGCTCGATCAAATaGAATCCGCACAGCCTTCCGGATGCTAGAGTTCCTCCCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WLPMDPAQMIHGSIK*NPHSLPDARVPPFH Trigger: ATGGAAGGGAGGAACTCTAGCATCCGGAAGGCTGTGCGGATTGCATTTGATCGAGCCATGAATCATCTGAGCCGGGTCCATGGGGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | AGGCTACAGCTCACCCAGCCTCCTAGTGATGCAGGAATGAGAGGGCCACACTGTTATCTCCACCATCCTTaGAGCTTGTGCGTAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLQLTQPPSDAGMRGPHCYLHHP*SLCVGQ Trigger: CTGACCTACGCACAAGCTCAAAGGATGGTGGAGATA...ACAGTGTGGCCCTCTCATTCCTGCATCACTAGGAGGCTGGGTGAGCTGTAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCCGAGTCCCTCACGTCCCTCAGGCTACAGCTCACCCAGCCTCCTAGTGCTTACACTTTTCGATTaGCAGAAGAGAACAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GAPSPSRPSGYSSPSLLVLTLFD*QKRTEV Trigger: CACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAAG...CACTAGGAGGCTGGGTGAGCTGTAGCCTGAGGGACGTGAGGGACTCGGAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS TCA 90 bp | CACAAGGGCAGGTTTCCCTCGCCCACACTTGGGTGTGCTAAAGCTTaGGTCGCAGAGTGGGCTGTTGCTGGAACAAATACTGGATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HKGRFPSPTLGCAKA*VAEWAVAGTNTGFR Trigger: TCTGAATCCAGTATTTGTTCCAGCAACAGCCCACTCTGCGACTCAAGCTTTAGCACACCCAAGTGTGGGCGAGGGAAACCTGCCCTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | CCATTTTCAATACAAGATATCAGCTCGCTTCGGTCTTCTAGCGTGTaGCTTCGCACAAGGGCAGGTTTCCCTCGCCCACACTTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PFSIQDISSLRSSSV*LRTRAGFPRPHLGV Trigger: CACACCCAAGTGTGGGCGAGGGAAACCTGCCCTTGTGCGAAGGCACACGCTAGAAGACCGAAGCGAGCTGATATCTTGTATTGAAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | TCCACTTCGGAGTCTCCACATGTGCTCCTCGACCTTTTCCTTGGCTaGAGTAGAGTCTCCAACCTCGGAAGGACTACAGACAAAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: STSESPHVLLDLFLG*SRVSNLGRTTDKKV Trigger: AACCTTTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTCCGAAGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | AGCAGCGTCAGTGGAAATCCACATGTTGCTCTGGCCCACCTCAGCTaGAATCCTGGCCGCCTTAGCGTAGTTTCCATTTTCAATACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSVSGNPHVALAHLS*NPGRLSVVSIFNTR Trigger: TCTTGTATTGAAAATGGAAACTACGCTAAGGCGGCCAGGATTGCAGCTGAGGTGGGCCAGAGCAACATGTGGATTTCCACTGACGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | GCAGTAGAGTCTCCAACCTCGGAAGGACTACAGACAAAAAGGTTTTaGTCCCTAGCTGAGGAGAAGTTGGCTGGGTTTCAGTGTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVESPTSEGLQTKRF*SLAEEKLAGFQCSW Trigger: CCAAGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | ACTTGTCGATGGTCTCGTCGACACCAAGAGGGACCATCTTGGACTTaGGAAGCCACTGCCAGCTCCTCTTATTGTCGAAAAACAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: TCRWSRRHQEGPSWT*EATASSSYCRKTEQ Trigger: TTGTTCTGTTTTTCGACAATAAGAGGAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGGTGTCGACGAGACCATCGACAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 90 bp | ATGCAAGCGCCCTTCGATTTCTATCTCCACCATCCTTTGAGCTTGTaGGTAGGTCAGTGTTTCTCGAGTGGGGGAGTGTTTAATACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MQAPFDFYLHHPLSL*VGQCFSSGGVFNTA Trigger: TGCAGTATTAAACACTCCCCCACTCGAGAAACACTGACCTACGCACAAGCTCAAAGGATGGTGGAGATAGAAATCGAAGGGCGCTTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 90 bp | TTTTCAACTTGTCGATGGTCTCGTCGACACCAAGAGGGACCATCTTaGACTTGGGAAGCCACTGCCAGCTCCTCTTATTGTCGAAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: FSTCRWSRRHQEGPS*TWEATASSSYCRKT Trigger: TGTTTTTCGACAATAAGAGGAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGGTGTCGACGAGACCATCGACAAGTTGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAATCAAAGTACACACAGGCCAGTCGTGTATATAACCTCGCAACACATTCTTGCTGCTGGCTCAGCTaGTTTCGGAGAAGAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: TKSKYTQASRVYNLATHSCCWLS*FRRRAI Trigger: GATTGCTCTTCTCCGAAACAAGCTGAGCCAGCAGCA...AGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGTGTACTTTGATTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | CTGCGGAGGCCGCCGCCGCCGGCACATCGCCACTACTaGCGAGGGTGGGCTCTGGAGGGTGTCCGCTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: LRRPPPPAHRHY*RGWALEGVRLP Trigger: TGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGGCCTCCGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | CCGCCGCCGCCGGCACATCGCCACTACTGGCGAGGGTaGGCTCTGGAGGGTGTCCGCTTACCAGTGCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPPPAHRHYWRG*ALEGVRLPVRS Trigger: AGAGCGCACTGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGCCGGCGGCGGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | GTCCACCTCTTCCCAGGAGAAGGGCCGCCGAGGGGCTaGGATGGGTCGCTCAGGCAGGTGCATTCCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VHLFPGEGPPRG*DGSLRQVHSRG Trigger: GCCTCGGGAATGCACCTGCCTGAGCGACCCATCGCAGCCCCTCGGCGGCCCTTCTCCTGGGAAGAGGTGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | GGCCTCCTGGGTGCAGAGGGAGGACTGTACTCCACAATCCGCACCTaGGGCTCGGGAAGGGCACTGGCTGACGCCGGTGTGCCGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLLGAEGGLYSTIRT*GSGRALADAGVPWV Trigger: CACCCACGGCACACCGGCGTCAGCCAGTGCCCTTCCCGAGCCCAAGGTGCGGATTGTGGAGTACAGTCCTCCCTCTGCACCCAGGAGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS TCA 72 bp | CACAATCCGCACCTTGGGCTCGGGAAGGGCACTGGCTaGCGCCGGTGTGCCGTGGGTGCTGGGCAGGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HNPHLGLGKGTG*RRCAVGAGQDF Trigger: GAAGTCCTGCCCAGCACCCACGGCACACCGGCGTCAGCCAGTGCCCTTCCCGAGCCCAAGGTGCGGATTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | CCTCTTCCCAGGAGAAGGGCCGCCGAGGGGCTGCGATaGGTCGCTCAGGCAGGTGCATTCCCGAGGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLPRRRAAEGLR*VAQAGAFPRPL Trigger: AAGAGGCCTCGGGAATGCACCTGCCTGAGCGACCCATCGCAGCCCCTCGGCGGCCCTTCTCCTGGGAAGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | CGCCGGCACATCGCCACTACTGGCGAGGGTGGGCTCTaGAGGGTGTCCGCTTACCAGTGCGCTCTGAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRHIATTGEGGL*RVSAYQCALSA Trigger: TGCACTCAGAGCGCACTGGTAAGCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGTGCCGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | CAGGCAGGTGCATTCCCGAGGCCTCTTCCAGGCCAATaGTCTCCACCTCTCGCCGGGCCTGCCTCAGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: QAGAFPRPLPGQ*SPPLAGPASGQ Trigger: TTGTCCTGAGGCAGGCCCGGCGAGAGGTGGAGAGCATTGGCCTGGAAGAGGCCTCGGGAATGCACCTGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | CCTCCCGTGCCTGCCCCTGTGGGCGGAGCCTGGCTGTaGTGCTGGCTCAGCTTGTTTCGGAGAAGAGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: PPVPAPVGGAWL*CWLSLFRRRAI Trigger: GATTGCTCTTCTCCGAAACAAGCTGAGCCAGCAGCACAGCCAGGCTCCGCCCACAGGGGCAGGCACGGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | GTGCAGAGGGAGGACTGTACTCCACAATCCGCACCTTaGGCTCGGGAAGGGCACTGGCTGACGCCGGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VQREDCTPQSAP*AREGHWLTPVC Trigger: GCACACCGGCGTCAGCCAGTGCCCTTCCCGAGCCCAAGGTGCGGATTGTGGAGTACAGTCCTCCCTCTGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | GGTGCAGAGGGAGGACTGTACTCCACAATCCGCACCTaGGGCTCGGGAAGGGCACTGGCTGACGCCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GAEGGLYSTIRT*GSGRALADAGV Trigger: CACACCGGCGTCAGCCAGTGCCCTTCCCGAGCCCAAGGTGCGGATTGTGGAGTACAGTCCTCCCTCTGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS TCA 72 bp | CGATCTTCAGCACATCCAGCGGCGGCGCAGGGATGGTaGCGCCATTGTGGTGGCCAGGCACTCGTGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RSSAHPAAAQGW*RHCGGQALVAS Trigger: AGATGCCACGAGTGCCTGGCCACCACAATGGCGTCACCATCCCTGCGCCGCCGCTGGATGTGCTGAAGATCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | CCCGTGCCTGCCCCTGTGGGCGGAGCCTGGCTGTGCTaGTGGCTCAGCTTGTTTCGGAGAAGAGCAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PVPAPVGGAWLC*WLSLFRRRAIS Trigger: AGAGATTGCTCTTCTCCGAAACAAGCTGAGCCAGCAGCACAGCCAGGCTCCGCCCACAGGGGCAGGCACGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | GAGTGGGCTGTTGCTGGAACAAATACTGGATTCAGATaGACAGCGCCGCCGGGGCGCAGCTTTCCTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EWAVAGTNTGFR*TAPPGRSFPPW Trigger: CCAGGGAGGAAAGCTGCGCCCCGGCGGCGCTGTGCATCTGAATCCAGTATTTGTTCCAGCAACAGCCCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | GGCTCGGGAAGGGCACTGGCTGACGCCGGTGTGCCGTaGGTGCTGGGCAGGACTTCATTTTTCTTTTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: GSGRALADAGVP*VLGRTSFFFLT Trigger: AGTCAAAAAGAAAAATGAAGTCCTGCCCAGCACCCACGGCACACCGGCGTCAGCCAGTGCCCTTCCCGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | TCCAGAAGTTCTCTCAGCTGCTCCTCCAAGCTCATGTaGGCCCTGTTGGCTGGGTCCAGCAACCTGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSLSCSSKLM*ALLAGSSNLST Trigger: GGTGGACAGGTTGCTGGACCCAGCCAACAGGGCCCACATGAGCTTGGAGGAGCAGCTGAGAGAACTTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | TTTTCGATTTGCAGAAGAGAACAGAAGTGCGTCTGTTTACATCGCTaGATGGCTCCGCCACTGCGGAGGCCGCCGCCGCCGGCACATCGC | + |
|
Preference number: 6 (lower is better) Translates to: FSICRREQKCVCLHR*MAPPLRRPPPPAHR Trigger: GCGATGTGCCGGCGGCGGCGGCCTCCGCAGTGGCGGAGCCATCAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCTGCAAATCGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | CGCCCACACTTGGGTGTGCTAAAGCTTGAGTCGCAGAGTGGGCTGTaGCTGGAACAAATACTGGATTCAGATGCACAGCGCCGCCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RPHLGVLKLESQSGL*LEQILDSDAQRRRG Trigger: GCCCCGGCGGCGCTGTGCATCTGAATCCAGTATTTGTTCCAGCAACAGCCCACTCTGCGACTCAAGCTTTAGCACACCCAAGTGTGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | CCTCCTCCACTTCGGAGTCTCCACATGTGCTCCTCGACCTTTTCCTaGGCTGCAGTAGAGTCTCCAACCTCGGAAGGACTTCCTCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPPLRSLHMCSSTFS*AAVESPTSEGLPPL Trigger: CAGCGGAGGAAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTCCGAAGTGGAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109380.8 |
||
| CDS GCA 72 bp | CAGGTCAGGTCCAACTTGTCCAGAAGTTCTCTCAGCTaGTCCTCCAAGCTCATGTGGGCCCTGTTGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QVRSNLSRSSLS*SSKLMWALLAG Trigger: CCCAGCCAACAGGGCCCACATGAGCTTGGAGGAGCAGCTGAGAGAACTTCTGGACAAGTTGGACCTGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | TTGAGTCGCAGAGTGGGCTGTTGCTGGAACAAATACTaGATTCAGATGCACAGCGCCGCCGGGGCGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSRRVGCCWNKY*IQMHSAAGAQL Trigger: AAGCTGCGCCCCGGCGGCGCTGTGCATCTGAATCCAGTATTTGTTCCAGCAACAGCCCACTCTGCGACTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | TGGCTGGCTCCCCATGGACCCGGCTCAGATGATTCATaGCTCGATCAAATGCAATCCGCACAGCCTTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: WLAPHGPGSDDS*LDQMQSAQPSG Trigger: TCCGGAAGGCTGTGCGGATTGCATTTGATCGAGCCATGAATCATCTGAGCCGGGTCCATGGGGAGCCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | GCCATCTGCTCCACCTTCACCTGCTCTCTCTTGAGTTTCTCCCGCTaGCGCAGCAGCTCAATTAGCAGGCGTGCACGCTCTAGGTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: AICSTFTCSLLSFSR*RSSSISRRARSRSC Trigger: ACATGACCTAGAGCGTGCACGCCTGCTAATTGAGCTGCTGCGCAAGCGGGAGAAACTCAAGAGAGAGCAGGTGAAGGTGGAGCAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | AAGCCAACCTCTGGGATCCACAGGGCACATACCACGTaGCCCCAGCGGTCATCGTCTGTCTTTTTGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KPTSGIHRAHTT*PQRSSSVFLKA Trigger: TGCCTTCAAAAAGACAGACGATGACCGCTGGGGCCACGTGGTATGTGCCCTGTGGATCCCAGAGGTTGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | TCCACCTTCACCTGCTCTCTCTTGAGTTTCTCCCGCTaGCGCAGCAGCTCAATTAGCAGGCGTGCACGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STFTCSLLSFSR*RSSSISRRARS Trigger: AGAGCGTGCACGCCTGCTAATTGAGCTGCTGCGCAAGCGGGAGAAACTCAAGAGAGAGCAGGTGAAGGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | GAGCCGCTGGACTTCATGGAGCAGGTCAGGTCCAACTaGTCCAGAAGTTCTCTCAGCTGCTCCTCCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EPLDFMEQVRSN*SRSSLSCSSKL Trigger: GAGCTTGGAGGAGCAGCTGAGAGAACTTCTGGACAAGTTGGACCTGACCTGCTCCATGAAGTCCAGCGGCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | GGAGGGATGTTCCTCACACCGTCAATGGGCTCAATGAATACCGTGTaGGCAAAGCCAACCTCTGGGATCCACAGGGCACATACCACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGMFLTPSMGSMNTV*AKPTSGIHRAHTTW Trigger: CCACGTGGTATGTGCCCTGTGGATCCCAGAGGTTGGCTTTGCCAACACGGTATTCATTGAGCCCATTGACGGTGTGAGGAACATCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | GTGGGGGAGTGTTTAATACTGCACGGGGAAGAAGGATaGCTCGCTGCAGAACCTCGATGGCATCGTCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGECLILHGEEG*LAAEPRWHRPF Trigger: GAAAGGACGATGCCATCGAGGTTCTGCAGCGAGGCATCCTTCTTCCCCGTGCAGTATTAAACACTCCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | ATACAAGATATCAGCTCGCTTCGGTCTTCTAGCGTGTaGCTTCGCACAAGGGCAGGTTTCCCTCGCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: IQDISSLRSSSV*LRTRAGFPRPH Trigger: GTGTGGGCGAGGGAAACCTGCCCTTGTGCGAAGGCACACGCTAGAAGACCGAAGCGAGCTGATATCTTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | GAGTCTCCACATGTGCTCCTCGACCTTTTCCTTGGCTaGAGTAGAGTCTCCAACCTCGGAAGGACTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ESPHVLLDLFLG*SRVSNLGRTSS Trigger: GGAGGAAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109380.8 |
||
| CDS CCA 72 bp | GCTTTGCCCGTTTACTCCGTGAGCCGCTGGACTTCATaGAGCAGGTCAGGTCCAACTTGTCCAGAAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALPVYSVSRWTS*SRSGPTCPEVL Trigger: GAGAACTTCTGGACAAGTTGGACCTGACCTGCTCCATGAAGTCCAGCGGCTCACGGAGTAAACGGGCAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS TCA 72 bp | CTCGAAGCGGTCCATCAGGAACTCAAACATATTCTGTaGCACGGCAGAGACGCAGTCACCCTTCCGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LEAVHQELKHIL*HGRDAVTLPLL Trigger: GAGAAGCGGAAGGGTGACTGCGTCTCTGCCGTGTCACAGAATATGTTTGAGTTCCTGATGGACCGCTTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | GAGTCTCCACATGTGCTCCTCGACCTTTTCCTTGGCTaGAGTAGAGTCTCCAACCTCGGAAGGACTACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ESPHVLLDLFLG*SRVSNLGRTTD Trigger: GTCTGTAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | GCGCCCTTCGATTTCTATCTCCACCATCCTTTGAGCTaGTGCGTAGGTCAGTGTTTCTCGAGTGGGGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: APFDFYLHHPLS*CVGQCFSSGGV Trigger: CACTCCCCCACTCGAGAAACACTGACCTACGCACAAGCTCAAAGGATGGTGGAGATAGAAATCGAAGGGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | CTTCGGAGTCTCCACATGTGCTCCTCGACCTTTTCCTaGGCTGCAGTAGAGTCTCCAACCTCGGAAGGACTA | + |
|
Preference number: 6 (lower is better) Translates to: LRSLHMCSSTFS*AAVESPTSEGL Trigger: TAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTCCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | CTTCGGAGTCTCCACATGTGCTCCTCGACCTTTTCCTaGGCTGCAGTAGAGTCTCCAACCTCGGAAGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: LRSLHMCSSTFS*AAVESPTSEGL Trigger: AAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTCCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109380.8 |
||
| CDS CAA 90 bp | CCTCCTCCACTTCGGAGTCTCCACATGTGCTCCTCGACCTTTTCCTaGGCTGCAGTAGAGTCTCCAACCTCGGAAGGACTACAGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PPPLRSLHMCSSTFS*AAVESPTSEGLQTK Trigger: TTTTGTCTGTAGTCCTTCCGAGGTTGGAGACTCTACTGCAGCCAAGGAAAAGGTCGAGGAGCACATGTGGAGACTCCGAAGTGGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS TCA 72 bp | AGGTTTCCCTCGCCCACACTTGGGTGTGCTAAAGCTTaGGTCGCAGAGTGGGCTGTTGCTGGAACAAATACT | + |
|
Preference number: 6 (lower is better) Translates to: RFPSPTLGCAKA*VAEWAVAGTNT Trigger: AGTATTTGTTCCAGCAACAGCCCACTCTGCGACTCAAGCTTTAGCACACCCAAGTGTGGGCGAGGGAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | GTGTTTAATACTGCACGGGGAAGAAGGATGCCTCGCTaGAGAACCTCGATGGCATCGTCCTTTCCTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VFNTARGRRMPR*RTSMASSFPPH Trigger: ATGAGGAGGAAAGGACGATGCCATCGAGGTTCTGCAGCGAGGCATCCTTCTTCCCCGTGCAGTATTAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | AGTGGAAATCCACATGTTGCTCTGGCCCACCTCAGCTaGAATCCTGGCCGCCTTAGCGTAGTTTCCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGNPHVALAHLS*NPGRLSVVSIF Trigger: GAAAATGGAAACTACGCTAAGGCGGCCAGGATTGCAGCTGAGGTGGGCCAGAGCAACATGTGGATTTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | ATGGACCCGGCTCAGATGATTCATGGCTCGATCAAATaGAATCCGCACAGCCTTCCGGATGCTAGAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MDPAQMIHGSIK*NPHSLPDARVP Trigger: AGGAACTCTAGCATCCGGAAGGCTGTGCGGATTGCATTTGATCGAGCCATGAATCATCTGAGCCGGGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | TGGTCTCGTCGACACCAAGAGGGACCATCTTGGACTTaGGAAGCCACTGCCAGCTCCTCTTATTGTCGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: WSRRHQEGPSWT*EATASSSYCRK Trigger: TTTTCGACAATAAGAGGAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGGTGTCGACGAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | TTCCTCACACCGTCAATGGGCTCAATGAATACCGTGTaGGCAAAGCCAACCTCTGGGATCCACAGGGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: FLTPSMGSMNTV*AKPTSGIHRAH Trigger: ATGTGCCCTGTGGATCCCAGAGGTTGGCTTTGCCAACACGGTATTCATTGAGCCCATTGACGGTGTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | ATGGTCTCGTCGACACCAAGAGGGACCATCTTGGACTaGGGAAGCCACTGCCAGCTCCTCTTATTGTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MVSSTPRGTILD*GSHCQLLLLSK Trigger: TTTCGACAATAAGAGGAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGGTGTCGACGAGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | ACAGCCTTCCGGATGCTAGAGTTCCTCCCTTCCATCATTTTCAACTaGTCGATGGTCTCGTCGACACCAAGAGGGACCATCTTGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: TAFRMLEFLPSIIFN*SMVSSTPRGTILDL Trigger: CAAGTCCAAGATGGTCCCTCTTGGTGTCGACGAGACCATCGACAAGTTGAAAATGATGGAAGGGAGGAACTCTAGCATCCGGAAGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS TCA 72 bp | GTGGGCTCTGGAGGGTGTCCGCTTACCAGTGCGCTCTaGGTGCAAGTGCTATGTGATTCATTATCAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGSGGCPLTSAL*VQVLCDSLSNV Trigger: CACATTTGATAATGAATCACATAGCACTTGCACTCAGAGCGCACTGGTAAGCGGACACCCTCCAGAGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | TTGGGTGTGCTAAAGCTTGAGTCGCAGAGTGGGCTGTaGCTGGAACAAATACTGGATTCAGATGCACAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGVLKLESQSGL*LEQILDSDAQR Trigger: GCGCTGTGCATCTGAATCCAGTATTTGTTCCAGCAACAGCCCACTCTGCGACTCAAGCTTTAGCACACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | CGGATGCTAGAGTTCCTCCCTTCCATCATTTTCAACTaGTCGATGGTCTCGTCGACACCAAGAGGGACCATC | + |
|
Preference number: 6 (lower is better) Translates to: RMLEFLPSIIFN*SMVSSTPRGTI Trigger: GATGGTCCCTCTTGGTGTCGACGAGACCATCGACAAGTTGAAAATGATGGAAGGGAGGAACTCTAGCATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | CCGATGCAAGCGCCCTTCGATTTCTATCTCCACCATCCTTTGAGCTaGTGCGTAGGTCAGTGTTTCTCGAGTGGGGGAGTGTTTAATACT | + |
|
Preference number: 6 (lower is better) Translates to: PMQAPFDFYLHHPLS*CVGQCFSSGGVFNT Trigger: AGTATTAAACACTCCCCCACTCGAGAAACACTGACCTACGCACAAGCTCAAAGGATGGTGGAGATAGAAATCGAAGGGCGCTTGCATCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | AACTTGTCGATGGTCTCGTCGACACCAAGAGGGACCATCTTGGACTaGGGAAGCCACTGCCAGCTCCTCTTATTGTCGAAAAACAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: NLSMVSSTPRGTILD*GSHCQLLLLSKNRT Trigger: TGTTCTGTTTTTCGACAATAAGAGGAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGGTGTCGACGAGACCATCGACAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | CCCTTCGATTTCTATCTCCACCATCCTTTGAGCTTGTaGGTAGGTCAGTGTTTCTCGAGTGGGGGAGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PFDFYLHHPLSL*VGQCFSSGGVF Trigger: AAACACTCCCCCACTCGAGAAACACTGACCTACGCACAAGCTCAAAGGATGGTGGAGATAGAAATCGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | ACACCAAGAGGGACCATCTTGGACTTGGGAAGCCACTaGCAGCTCCTCTTATTGTCGAAAAACAGAACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPRGTILDLGSH*QLLLLSKNRTR Trigger: CCTTGTTCTGTTTTTCGACAATAAGAGGAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CCA 72 bp | TGTGGGCTCGCTCCACAAACTGCTTCTTCCGCTGAATaGCCACCTGATTCGCAATCCTATTTAATCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: CGLAPQTASSAE*PPDSQSYLISE Trigger: CTCAGAGATTAAATAGGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGCAGTTTGTGGAGCGAGCCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | ATTTTCAACTTGTCGATGGTCTCGTCGACACCAAGAGGGACCATCTaGGACTTGGGAAGCCACTGCCAGCTCCTCTTATTGTCGAAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IFNLSMVSSTPRGTI*DLGSHCQLLLLSKN Trigger: GTTTTTCGACAATAAGAGGAGCTGGCAGTGGCTTCCCAAGTCCAAGATGGTCCCTCTTGGTGTCGACGAGACCATCGACAAGTTGAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||
| CDS TCA 72 bp | GGAAGGACTACAGACAAAAAGGTTTTGGTCCCTAGCTaGGGAGAAGTTGGCTGGGTTTCAGTGTTCTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRTTDKKVLVPS*GEVGWVSVFLA Trigger: TGCCAAGAACACTGAAACCCAGCCAACTTCTCCTCAGCTAGGGACCAAAACCTTTTTGTCTGTAGTCCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | GGCTTACACTTTTCGATTTGCAGAAGAGAACAGAAGTaGGTCTGTTTACATCGCTTGATGGCTCCGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: GLHFSICRREQK*VCLHRLMAPPL Trigger: CAGTGGCGGAGCCATCAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCTGCAAATCGAAAAGTGTAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CAA 72 bp | AATAGTTTACTCTGCTCGGGGTGGAGTTCTACTGGGTaGAGGGTTGGTGGTTCTGAGTTAGTCTCCGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NSLLCSGWSSTG*RVGGSELVSEF Trigger: AAACTCGGAGACTAACTCAGAACCACCAACCCTCAACCCAGTAGAACTCCACCCCGAGCAGAGTAAACTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS CAA 90 bp | ACTCTTTTGAATAGTTTACTCTGCTCGGGGTGGAGTTCTACTGGGTaGAGGGTTGGTGGTTCTGAGTTAGTCTCCGAGTTTGAAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLLNSLLCSGWSSTG*RVGGSELVSEFEGR Trigger: TCTTCCTTCAAACTCGGAGACTAACTCAGAACCACCAACCCTCAACCCAGTAGAACTCCACCCCGAGCAGAGTAAACTATTCAAAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109381.9 |
||
| CDS GCA 72 bp | AGTATGATCTCCAAGGGATCAAAAATACTGATCCGATaGAAGCGCCCTTCGATTTCTATCTCCACCATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SMISKGSKILIR*KRPSISISTIL Trigger: AAGGATGGTGGAGATAGAAATCGAAGGGCGCTTGCATCGGATCAGTATTTTTGATCCCTTGGAGATCATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109380.8 ENSMUST00000109381.9 |
||