Pregenerated sensors for BRCA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041147Ensembl transcript IDs: ENSMUST00000044620.11, ENSMUST00000202003.4, ENSMUST00000202313.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AGTGCAGCTACTCCCGCCTTCTCACACGAACACCTATaGGTAGCCTGGAACTGTACACATCTTACAAACCGG | + |
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Preference number: 3 (lower is better) Translates to: SAATPAFSHEHL*VAWNCTHLTNR Trigger: CCGGTTTGTAAGATGTGTACAGTTCCAGGCTACTCATAGGTGTTCGTGTGAGAAGGCGGGAGTAGCTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | GTCCCTGAGAGACTCCTTCCTGGACCTGGGCCCTACTTGCTGGTCTaGCCTCTGTGCTGGCTGGGGGTTCCTTGTGGAATCACCGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: VPERLLPGPGPYLLV*PLCWLGVPCGITGK Trigger: TTTCCCGGTGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAGGGCCCAGGTCCAGGAAGGAGTCTCTCAGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | CTACAGTCCCTGAGAGACTCCTTCCTGGACCTGGGCCCTACTTGCTaGTCTGGCCTCTGTGCTGGCTGGGGGTTCCTTGTGGAATCACCG | + |
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Preference number: 5 (lower is better) Translates to: LQSLRDSFLDLGPTC*SGLCAGWGFLVESP Trigger: CGGTGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAGGGCCCAGGTCCAGGAAGGAGTCTCTCAGGGACTGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | CCTGTCTCCTACTGCAGCCTGCAGGGAGATCCGGGGCAGGGTGGATaGCTTTGTAAGATACAGACTGCCTGGCTGCAGACGGAGATGTCG | + |
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Preference number: 5 (lower is better) Translates to: PVSYCSLQGDPGQGG*LCKIQTAWLQTEMS Trigger: CGACATCTCCGTCTGCAGCCAGGCAGTCTGTATCTTACAAAGTCATCCACCCTGCCCCGGATCTCCCTGCAGGCTGCAGTAGGAGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | GGCAGAGGGAAGGGCCTGGGGTCACGAAAGAACCCCAGCCTGCTGTaGCAGCGAGCAGGCCTTGTGCTGTTTGCAGAAATCTTTAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: GRGKGLGSRKNPSLL*QRAGLVLFAEIFSL Trigger: AAGGCTAAAGATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGGGGTTCTTTCGTGACCCCAGGCCCTTCCCTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | ACAAGGGCAGAGGGAAGGGCCTGGGGTCACGAAAGAACCCCAGCCTaGTGTGCCAGCGAGCAGGCCTTGTGCTGTTTGCAGAAATCTTTA | + |
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Preference number: 5 (lower is better) Translates to: TRAEGRAWGHERTPA*CASEQALCCLQKSL Trigger: TAAAGATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGGGGTTCTTTCGTGACCCCAGGCCCTTCCCTCTGCCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | TTCCTGGACCTGGGCCCTACTTGCTGGTCTGGCCTCTGTGCTGGCTaGGGGTTCCTTGTGGAATCACCGGGAAACGCTTGTTCATTTCCT | + |
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Preference number: 5 (lower is better) Translates to: FLDLGPTCWSGLCAG*GFLVESPGNACSFP Trigger: AGGAAATGAACAAGCGTTTCCCGGTGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAGGGCCCAGGTCCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | CATAGAGCTCTGCTCCATCCTGCAGAGCATGGACTTGCTGCCGTGTaGGTGTGCGGGACAGCACACACCGCTGTGTTGTGTCTTCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: HRALLHPAEHGLAAV*VCGTAHTAVLCLLR Trigger: ACGAAGAAGACACAACACAGCGGTGTGTGCTGTCCCGCACACTCACACGGCAGCAAGTCCATGCTCTGCAGGATGGAGCAGAGCTCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | GGTCACGAAAGAACCCCAGCCTGCTGTGCCAGCGAGCAGGCCTTGTaGTGTTTGCAGAAATCTTTAGCCTTAGGGAGTCTGGGGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: GHERTPACCASEQAL*CLQKSLALGSLGLP Trigger: TGGAAGCCCCAGACTCCCTAAGGCTAAAGATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGGGGTTCTTTCGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | AAGACTCAACAGCTAATTTCTCACTGCTGTCGCCTCTACAGTCCCTaGGAGACTCCTTCCTGGACCTGGGCCCTACTTGCTGGTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KTQQLISHCCRLYSP*ETPSWTWALLAGLA Trigger: GGCCAGACCAGCAAGTAGGGCCCAGGTCCAGGAAGGAGTCTCTCAGGGACTGTAGAGGCGACAGCAGTGAGAAATTAGCTGTTGAGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | GTCAGTTTGCCACTCTTTACAAGAGCCATGAGTGGAGGGTCTAGCTaGGCCCTGACAGCGTACCACCCATCTGTGAGTTCGATCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VSLPLFTRAMSGGSS*ALTAYHPSVSSIVS Trigger: GGACACGATCGAACTCACAGATGGGTGGTACGCTGTCAGGGCCCAGCTAGACCCTCCACTCATGGCTCTTGTAAAGAGTGGCAAACTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | TCCAAAGCTGAGTGTCTCCAGGGATGCCCTTTAGACAGAAGCTCTTaGGCAGGTGAGGTAAGATGTGGGCGCTGGGCTCCTTGCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SKAECLQGCPLDRSS*AGEVRCGRWAPCLS Trigger: AGAAAGGCAAGGAGCCCAGCGCCCACATCTTACCTCACCTGCTCAAGAGCTTCTGTCTAAAGGGCATCCCTGGAGACACTCAGCTTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | TGCTTAGGAGAACATGCAGAAGGAGCCCTGTCTCCTACTGCAGCCTaGAGGGAGATCCGGGGCAGGGTGGATGACTTTGTAAGATACAGA | + |
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Preference number: 5 (lower is better) Translates to: CLGEHAEGALSPTAA*REIRGRVDDFVRYR Trigger: TCTGTATCTTACAAAGTCATCCACCCTGCCCCGGATCTCCCTGCAGGCTGCAGTAGGAGACAGGGCTCCTTCTGCATGTTCTCCTAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | AACAATGATATCCACACAGCCAACATTTCCTCCGTCACTGAACAGTaGGGACAAGGGCAGAGGGAAGGGCCTGGGGTCACGAAAGAACCC | + |
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Preference number: 5 (lower is better) Translates to: NNDIHTANISSVTEQ*GQGQREGPGVTKEP Trigger: GGGTTCTTTCGTGACCCCAGGCCCTTCCCTCTGCCCTTGTCCTCACTGTTCAGTGACGGAGGAAATGTTGGCTGTGTGGATATCATTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | CCACTTCAGAACAAGGAGGCTGAAAGGCTGGGTCTGACAGTCTGCTaGAGTGAAGGGACTCCCTGGGCTGGTAAACCTGGAGTAAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: PLQNKEAERLGLTVC*SEGTPWAGKPGVKS Trigger: AGACTTTACTCCAGGTTTACCAGCCCAGGGAGTCCCTTCACTTCAGCAGACTGTCAGACCCAGCCTTTCAGCCTCCTTGTTCTGAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | CGTAAGGGCCTGGGTGCTGAGCAAGGCAAGTTCTTCATCAGCTACTaGATCACAGTCCGGCAGAGAAACGCCACTGGTCTTCTGAAATGG | + |
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Preference number: 5 (lower is better) Translates to: RKGLGAEQGKFFISY*ITVRQRNATGLLKW Trigger: CCATTTCAGAAGACCAGTGGCGTTTCTCTGCCGGACTGTGATTCAGTAGCTGATGAAGAACTTGCCTTGCTCAGCACCCAGGCCCTTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | GCTTTTCAAAGTAGCGGGAGAGTCAGCAGGCGTTACAGAGCTGCGTaGTTCTTCATCTCGGGCTATGAGCACAGTGGAACTAAGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: AFQSSGRVSRRYRAA*FFISGYEHSGTKGW Trigger: CCAACCCTTAGTTCCACTGTGCTCATAGCCCGAGATGAAGAAGCACGCAGCTCTGTAACGCCTGCTGACTCTCCCGCTACTTTGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | GGAAACGCTTGTTCATTTCCTCCCACGGAGTCAGGCGTAAGGGCCTaGGTGCTGAGCAAGGCAAGTTCTTCATCAGCTACTGAATCACAG | + |
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Preference number: 5 (lower is better) Translates to: GNACSFPPTESGVRA*VLSKASSSSATESQ Trigger: CTGTGATTCAGTAGCTGATGAAGAACTTGCCTTGCTCAGCACCCAGGCCCTTACGCCTGACTCCGTGGGAGGAAATGAACAAGCGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | CCAGCAAATAAGGTCGGCACTCCTGATGTGGATTCTGGCTGGCACTaGAGGTTGCTTGCGGCAATTAGCACACGTGGCTTTATGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PANKVGTPDVDSGWH*RLLAAISTRGFMSS Trigger: TGAAGACATAAAGCCACGTGTGCTAATTGCCGCAAGCAACCTCCAGTGCCAGCCAGAATCCACATCAGGAGTGCCGACCTTATTTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | AAATGGCCAGCAAATAAGGTCGGCACTCCTGATGTGGATTCTGGCTaGCACTGGAGGTTGCTTGCGGCAATTAGCACACGTGGCTTTATG | + |
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Preference number: 5 (lower is better) Translates to: KWPANKVGTPDVDSG*HWRLLAAISTRGFM Trigger: CATAAAGCCACGTGTGCTAATTGCCGCAAGCAACCTCCAGTGCCAGCCAGAATCCACATCAGGAGTGCCGACCTTATTTGCTGGCCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | AATCAACACTTGGGCTGCATGCGCATCATCTACATCTTCATCTACTaGCATGGGAGAGTTCTTGAGACTAGGCCCTTGTGTGTGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NQHLGCMRIIYIFIY*HGRVLETRPLCVAE Trigger: CTCAGCCACACACAAGGGCCTAGTCTCAAGAACTCTCCCATGGCAGTAGATGAAGATGTAGATGATGCGCATGCAGCCCAAGTGTTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | ATCCGGGGCAGGGTGGATGACTTTGTAAGATACAGACTGCCTGGCTaGAGACGGAGATGTCGCCTTTCTTTGTTTTTAATTCGCATATCC | + |
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Preference number: 5 (lower is better) Translates to: IRGRVDDFVRYRLPG*RRRCRLSLFLIRIS Trigger: GGATATGCGAATTAAAAACAAAGAAAGGCGACATCTCCGTCTGCAGCCAGGCAGTCTGTATCTTACAAAGTCATCCACCCTGCCCCGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | TTTTCCAGCCTTGCCATCATTGGAGGGGATCAGCCATCCACCATCTaGCAACTGAAAGCCTTTGCCAGCACACAGATCTTCTTTACCAAA | + |
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Preference number: 5 (lower is better) Translates to: FSSLAIIGGDQPSTI*QLKAFASTQIFFTK Trigger: TTTGGTAAAGAAGATCTGTGTGCTGGCAAAGGCTTTCAGTTGGCAGATGGTGGATGGCTGATCCCCTCCAATGATGGCAAGGCTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | TCATCTACTGCCATGGGAGAGTTCTTGAGACTAGGCCCTTGTGTGTaGCTGAGGTCTTCTTCCTGGAGTTCCACTGAACTTCCTAAATCA | + |
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Preference number: 5 (lower is better) Translates to: SSTAMGEFLRLGPCV*LRSSSWSSTELPKS Trigger: TGATTTAGGAAGTTCAGTGGAACTCCAGGAAGAAGACCTCAGCCACACACAAGGGCCTAGTCTCAAGAACTCTCCCATGGCAGTAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | AACTCTGTGTGGACTTTGGTGAACAAGGCCTCTAGTTTCTTCTGCTaGGCCTCTGCAAATCTCAGTGCTTCCTTCTCCTCTTCTCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: NSVWTLVNKASSFFC*ASANLSASFSSSLS Trigger: TGAGAGAGAAGAGGAGAAGGAAGCACTGAGATTTGCAGAGGCCCAGCAGAAGAAACTAGAGGCCTTGTTCACCAAAGTCCACACAGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | ACACACCGCTGTGTTGTGTCTTCTTCGTGGTCTTTAAACTCTGTGTaGACTTTGGTGAACAAGGCCTCTAGTTTCTTCTGCTGGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: THRCVVSSSWSLNSV*TLVNKASSFFCWAS Trigger: AGAGGCCCAGCAGAAGAAACTAGAGGCCTTGTTCACCAAAGTCCACACAGAGTTTAAAGACCACGAAGAAGACACAACACAGCGGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | AGTGAAGGGACTCCCTGGGCTGGTAAACCTGGAGTAAAGTCTCACTaGAAACCGGCAGCTGTTGATACTGAGTTCTTTTTGTGGCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: SEGTPWAGKPGVKSH*KPAAVDTEFFLWLL Trigger: TAACAGCCACAAAAAGAACTCAGTATCAACAGCTGCCGGTTTCCAGTGAGACTTTACTCCAGGTTTACCAGCCCAGGGAGTCCCTTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | AAAATATGGAAAAATGGCCAGCAAATAAGGTCGGCACTCCTGATGTaGATTCTGGCTGGCACTGGAGGTTGCTTGCGGCAATTAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: KIWKNGQQIRSALLM*ILAGTGGCLRQLAH Trigger: GTGTGCTAATTGCCGCAAGCAACCTCCAGTGCCAGCCAGAATCCACATCAGGAGTGCCGACCTTATTTGCTGGCCATTTTTCCATATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | TCAGCATTTGTCTGTAGTTGTTCAAGGCTCTTAGCTGCTCTTCGCTaGAACAAGCCTCAAGGTGATCTGGGTCTGATGCATACTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SAFVCSCSRLLAALR*NKPQGDLGLMHTAL Trigger: CAGTGCAGTATGCATCAGACCCAGATCACCTTGAGGCTTGTTTCAGCGAAGAGCAGCTAAGAGCCTTGAACAACTACAGACAAATGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | TTAAACTCTGTGTGGACTTTGGTGAACAAGGCCTCTAGTTTCTTCTaGTGGGCCTCTGCAAATCTCAGTGCTTCCTTCTCCTCTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LNSVWTLVNKASSFF*WASANLSASFSSSL Trigger: GAGAGAAGAGGAGAAGGAAGCACTGAGATTTGCAGAGGCCCAGCAGAAGAAACTAGAGGCCTTGTTCACCAAAGTCCACACAGAGTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | TTACTTGAGCAGAAGGGTCCACAGGTAACCGGCTCTAAAGACATGTaGTGTGTGAACAAGCTTCTGTCTTTTACTGTGCCATCTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLEQKGPQVTGSKDM*CVNKLLSFTVPSGV Trigger: CACTCCAGATGGCACAGTAAAAGACAGAAGCTTGTTCACACACCACATGTCTTTAGAGCCGGTTACCTGTGGACCCTTCTGCTCAAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | TTCAAATTGCTTGCTGTGATCTGTCTGACCTACAGAGGGATCCACTaGGAGGTGAAGATCAGTATCTTTCCACTCCTTAGAAGCGGTACT | + |
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Preference number: 5 (lower is better) Translates to: FKLLAVICLTYRGIH*EVKISIFPLLRSGT Trigger: AGTACCGCTTCTAAGGAGTGGAAAGATACTGATCTTCACCTCCCAGTGGATCCCTCTGTAGGTCAGACAGATCACAGCAAGCAATTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | CAGCTGTGTCATCCCTCTCCAGTATCTTCTTTAGAGCCGATCTCCTaGTGTTGTCAATTTCCACATCGTATCTGTATTTCAGTTGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: QLCHPSPVSSLEPIS*CCQFPHRICISVEA Trigger: TGCTTCAACTGAAATACAGATACGATGTGGAAATTGACAACAGCAGGAGATCGGCTCTAAAGAAGATACTGGAGAGGGATGACACAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | GAGTTCTTGAGACTAGGCCCTTGTGTGTGGCTGAGGTCTTCTTCCTaGAGTTCCACTGAACTTCCTAAATCAGGCTTATTGCATTTATTA | + |
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Preference number: 5 (lower is better) Translates to: EFLRLGPCVWLRSSS*SSTELPKSGLLHLL Trigger: TAATAAATGCAATAAGCCTGATTTAGGAAGTTCAGTGGAACTCCAGGAAGAAGACCTCAGCCACACACAAGGGCCTAGTCTCAAGAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | TCAGTATCTTTCCACTCCTTAGAAGCGGTACTTAAAACAACCATCTaGTTTCCAGGCACTTCAGATGTATTCTGTGCTATGTGGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: SVSFHSLEAVLKTTI*FPGTSDVFCAMWLG Trigger: GCCAAGCCACATAGCACAGAATACATCTGAAGTGCCTGGAAACCAGATGGTTGTTTTAAGTACCGCTTCTAAGGAGTGGAAAGATACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | ACATGGCTGTCGTTCCCGTCTTCCCTGTCTCCATCTGTGCTCTTTTaGTTCTTTCCCTCCAAATTAACGTTCTTGCTATTGAAATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TWLSFPSSLSPSVLF*FFPSKLTFLLLKCS Trigger: TGAACATTTCAATAGCAAGAACGTTAATTTGGAGGGAAAGAACCAAAAGAGCACAGATGGAGACAGGGAAGACGGGAACGACAGCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | AATCCACCTGTAATGGTTAGCAACCCAGATGCTAGAAATAAGCTTTaGATCCACACCTGGAGTGTCACACAGAGCCCTATAAAATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: NPPVMVSNPDARNKL*IHTWSVTQSPIKFF Trigger: GAAGAATTTTATAGGGCTCTGTGTGACACTCCAGGTGTGGATCCAAAGCTTATTTCTAGCATCTGGGTTGCTAACCATTACAGGTGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | ACTTGTTCTAGACACCATTTGCTTCCCTGCAATGGAGTCTTCAAGTaGTTCAAAATGCTGTCCTTCATGTTCCTTATCTACCACAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: TCSRHHLLPCNGVFK*FKMLSFMFLIYHSL Trigger: GAGACTGTGGTAGATAAGGAACATGAAGGACAGCATTTTGAATCACTTGAAGACTCCATTGCAGGGAAGCAAATGGTGTCTAGAACAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | AGAAGACTCTCTGACACAAGTTTTCCTACTGTCCTCCGTATAATATaGCAAAGCAGAATCTTCAGTGACTGGGTAAGAGGACTGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: RRLSDTSFPTVLRII*QSRIFSDWVRGLTN Trigger: ATTTGTCAGTCCTCTTACCCAGTCACTGAAGATTCTGCTTTGGCATATTATACGGAGGACAGTAGGAAAACTTGTGTCAGAGAGTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | CCACTTGGGACTGTCTCCCTCAAGCACGTGTATAAGCTTCTTTTCTaGCTCCTTGTAAAATGTATCGATATTCTCAATAGCATGCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: PLGTVSLKHVYKLLF*LLVKCIDILNSMLQ Trigger: TTGAAGCATGCTATTGAGAATATCGATACATTTTACAAGGAGGCAGAAAAGAAGCTTATACACGTGCTTGAGGGAGACAGTCCCAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | AGTTCTCGAATTAAACAAAGTCTCATTTTGGGGGCATGTAAACAGTaGGCATTTGGCATGAGTCTGTTCAGAATCTGTCAGCTCATCATC | + |
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Preference number: 5 (lower is better) Translates to: SSRIKQSLILGACKQ*AFGMSLFRICQLII Trigger: GATGATGAGCTGACAGATTCTGAACAGACTCATGCCAAATGCTCACTGTTTACATGCCCCCAAAATGAGACTTTGTTTAATTCGAGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | CAAATTAACGTTCTTGCTATTGAAATGTTCATCTCCGTGAAACTGTaGTTTCATCTTGAAAGGCGGGACGAAGACTTTGGTGGATTTGCC | + |
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Preference number: 5 (lower is better) Translates to: QINVLAIEMFISVKL*FHLERRDEDFGGFA Trigger: GGCAAATCCACCAAAGTCTTCGTCCCGCCTTTCAAGATGAAATCACAGTTTCACGGAGATGAACATTTCAATAGCAAGAACGTTAATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | TTTCCCTCCAAATTAACGTTCTTGCTATTGAAATGTTCATCTCCGTaGAACTGTGATTTCATCTTGAAAGGCGGGACGAAGACTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: FPSKLTFLLLKCSSP*NCDFILKGGTKTLV Trigger: CACCAAAGTCTTCGTCCCGCCTTTCAAGATGAAATCACAGTTTCACGGAGATGAACATTTCAATAGCAAGAACGTTAATTTGGAGGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | TCACCAAGAGGGTTTTCCTGTGATTCAAAGCTAATGCTGCTGAGTTaGACTGCTGAAGGAAGACATGCTGAAACTAAGACTTTTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SPRGFSCDSKLMLLS*TAEGRHAETKTFSF Trigger: AAAAGAAAAAGTCTTAGTTTCAGCATGTCTTCCTTCAGCAGTGCAACTCAGCAGCATTAGCTTTGAATCACAGGAAAACCCTCTTGGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | TGTTTTCCTCTCTCGCATATTGGGTACATGACTCAGGACACTTACTaGCTTGATCGGCAGGTAAATCACTGTCACCTTTATGAATATAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFPLSHIGYMTQDTY*LDRQVNHCHLYEYK Trigger: TTTATATTCATAAAGGTGACAGTGATTTACCTGCCGATCAAGGCAGTAAGTGTCCTGAGTCATGTACCCAATATGCGAGAGAGGAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | CCTACTGTCCTCCGTATAATATGCCAAAGCAGAATCTTCAGTGACTaGGTAAGAGGACTGACAAATACAGCAAATTCTAGGATTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTVLRIICQSRIFSD*VRGLTNTANSRILF Trigger: GAAAAGAATCCTAGAATTTGCTGTATTTGTCAGTCCTCTTACCCAGTCACTGAAGATTCTGCTTTGGCATATTATACGGAGGACAGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | GTTATTTTTCCTGTCTGGGTTTCATTTAGACCAGAAAGGTTTGACTaGGACCATCTACTATCTGAACACTGTACAGCTTCATTGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: VIFPVWVSFRPERFD*DHLLSEHCTASLQI Trigger: AATCTGCAATGAAGCTGTACAGTGTTCAGATAGTAGATGGTCTCAGTCAAACCTTTCTGGTCTAAATGAAACCCAGACAGGAAAAATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | GTCTCCTCACTGAACATCTTTTCCGGTTCTGGAAGACTAGAAATATaGGGTAAAGATTTTTCTGAAGTAATAGAGCCAGTACCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSLNIFSGSGRLEI*GKDFSEVIEPVPSF Trigger: GAAAGAAGGTACTGGCTCTATTACTTCAGAAAAATCTTTACCTCATATTTCTAGTCTTCCAGAACCGGAAAAGATGTTCAGTGAGGAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | GAAGAGCTAGGACATATAAAATCCTTTGAATCATCCAATACTTTATaGCAGCTTGTCTGGCAAGTGTCTGGTTTACTCTGTCTGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EELGHIKSFESSNTL*QLVWQVSGLLCLFC Trigger: GCAAAACAGACAGAGTAAACCAGACACTTGCCAGACAAGCTGTCATAAAGTATTGGATGATTCAAAGGATTTTATATGTCCTAGCTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | AATCTTTGTCTTCGGTTCCTTTCTGGTGCTGCTCTATATTATTTCTaGTCTTCTCTGTATAATCATGGACCACAGCTAATGAATCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NLCLRFLSGAALYYF*SSLYNHGPQLMNLS Trigger: ACTCAGATTCATTAGCTGTGGTCCATGATTATACAGAGAAGAGCAGAAATAATATAGAGCAGCACCAGAAAGGAACCGAAGACAAAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | TTCTCTTATAGATTTACTTGTATCCCAAGTTTCCAAACCAACAGGTaGTGTTGCAGCTTTCTTCAGTCCAGACATACTTTGGTTATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSYRFTCIPSFQTNR*CCSFLQSRHTLVML Trigger: CAACATAACCAAAGTATGTCTGGACTGAAGAAAGCTGCAACACCACCTGTTGGTTTGGAAACTTGGGATACAAGTAAATCTATAAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | CTTTACTTTCTATTATCCTGTCAAATTCATTTAATAAGCTTCTTTTaGTTGGGGGTTGTCCAACTGCGTCAACAGTCACTCCTCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LYFLLSCQIHLISFF*LGVVQLRQQSLLLF Trigger: AAAGAGGAGGAGTGACTGTTGACGCAGTTGGACAACCCCCAATCAAAAGAAGCTTATTAAATGAATTTGACAGGATAATAGAAAGTAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | AATCACTGTTCCCATCTGATTTCATATTCAAGGAGGAATTTGACTTaGAATCTTTGTCTTCGGTTCCTTTCTGGTGCTGCTCTATATTAT | + |
|
Preference number: 5 (lower is better) Translates to: NHCSHLISYSRRNLT*NLCLRFLSGAALYY Trigger: ATAATATAGAGCAGCACCAGAAAGGAACCGAAGACAAAGATTTCAAGTCAAATTCCTCCTTGAATATGAAATCAGATGGGAACAGTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | TATGTGGCTTGGCTTTCTGAACTGTGTGAATTCAAACTGACTTCCTaGTTCTTCCAAAATAGTAGACAGTTCTGTAATTTCTGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YVAWLSELCEFKLTS*FFQNSRQFCNFCFL Trigger: CAAAAAGCAGAAATTACAGAACTGTCTACTATTTTGGAAGAATCAGGAAGTCAGTTTGAATTCACACAGTTCAGAAAGCCAAGCCACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | CAGTTATCTGTGACTATCTCTTTTGTTCTTTCAGTTTCTTGTGAATaGGCTGTAATAAACACGAGTGAGCCTACCTTACAATTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLSVTISFVLSVSCE*AVINTSEPTLQFLE Trigger: TTCAAGGAATTGTAAGGTAGGCTCACTCGTGTTTATTACAGCTCATTCACAAGAAACTGAAAGAACAAAAGAGATAGTCACAGATAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 90 bp | ATGGAAGATAACTGTTTAGCATCACCATCCATCTCAGAAAACACTTaGCTTGCCTTTTCTAATGAAGCATCTGATACTTGTATAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MEDNCLASPSISENT*LAFSNEASDTCIAF Trigger: AAAAGCTATACAAGTATCAGATGCTTCATTAGAAAAGGCAAGGCAAGTGTTTTCTGAGATGGATGGTGATGCTAAACAGTTATCTTCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 90 bp | TCCACTGAACTTCCTAAATCAGGCTTATTGCATTTATTAGTTACTTaGAAAGCAAAATTATTCCCACTGTCTGGGAAAAGTTCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STELPKSGLLHLLVT*KAKLFPLSGKSSSE Trigger: CTCTGAAGAACTTTTCCCAGACAGTGGGAATAATTTTGCTTTTCAAGTAACTAATAAATGCAATAAGCCTGATTTAGGAAGTTCAGTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 90 bp | GAGTATTGCCCGAAGAACCACTTTCTTTATAATTACTTGGTAAGCTaGATTTATCATTGTAGGTTTTCTGCAATTTTGAGTTTACAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EYCPKNHFLYNYLVS*IYHCRFSAILSLQG Trigger: ACCCTGTAAACTCAAAATTGCAGAAAACCTACAATGATAAATCCAGCTTACCAAGTAATTATAAAGAAAGTGGTTCTTCGGGCAATACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | GTCCCTGAGAGACTCCTTCCTGGACCTGGGCCCTACTaGCTGGTCTGGCCTCTGTGCTGGCTGGGGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPERLLPGPGPY*LVWPLCWLGVP Trigger: AGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAGGGCCCAGGTCCAGGAAGGAGTCTCTCAGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | CTGAGAGACTCCTTCCTGGACCTGGGCCCTACTTGCTaGTCTGGCCTCTGTGCTGGCTGGGGGTTCCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRDSFLDLGPTC*SGLCAGWGFLV Trigger: CACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAGGGCCCAGGTCCAGGAAGGAGTCTCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | CTGGGCCCTACTTGCTGGTCTGGCCTCTGTGCTGGCTaGGGGTTCCTTGTGGAATCACCGGGAAACGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGPTCWSGLCAG*GFLVESPGNAC Trigger: ACAAGCGTTTCCCGGTGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAGGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | CAAGTGGAGGCTGCATGGGGCTCTCGGGTGGGGTCTTaGTTCGGTGTGGACCACTTGGGACTGTCTCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QVEAAWGSRVGS*FGVDHLGLSPS Trigger: TGAGGGAGACAGTCCCAAGTGGTCCACACCGAACAAAGACCCCACCCGAGAGCCCCATGCAGCCTCCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | GAAGCACAGCAAGTGGAGGCTGCATGGGGCTCTCGGGTGGGGTCTTaGTTCGGTGTGGACCACTTGGGACTGTCTCCCTCAAGCACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EAQQVEAAWGSRVGS*FGVDHLGLSPSSTC Trigger: ACACGTGCTTGAGGGAGACAGTCCCAAGTGGTCCACACCGAACAAAGACCCCACCCGAGAGCCCCATGCAGCCTCCACTTGCTGTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | CTGCTCCATCCTGCAGAGCATGGACTTGCTGCCGTGTaGGTGTGCGGGACAGCACACACCGCTGTGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLHPAEHGLAAV*VCGTAHTAVLC Trigger: ACACAACACAGCGGTGTGTGCTGTCCCGCACACTCACACGGCAGCAAGTCCATGCTCTGCAGGATGGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | AAGGGCCTGGGGTCACGAAAGAACCCCAGCCTGCTGTaGCAGCGAGCAGGCCTTGTGCTGTTTGCAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: KGLGSRKNPSLL*QRAGLVLFAEI Trigger: GATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGGGGTTCTTTCGTGACCCCAGGCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | AAGCACAGCAAGTGGAGGCTGCATGGGGCTCTCGGGTaGGGTCTTTGTTCGGTGTGGACCACTTGGGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: KHSKWRLHGALG*GLCSVWTTWDC Trigger: ACAGTCCCAAGTGGTCCACACCGAACAAAGACCCCACCCGAGAGCCCCATGCAGCCTCCACTTGCTGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | CCAAGGAGATCTGAAGCACAGCAAGTGGAGGCTGCATaGGGCTCTCGGGTGGGGTCTTTGTTCGGTGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRRSEAQQVEAA*GSRVGSLFGVD Trigger: GTCCACACCGAACAAAGACCCCACCCGAGAGCCCCATGCAGCCTCCACTTGCTGTGCTTCAGATCTCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | TGCATAGAGCTCTGCTCCATCCTGCAGAGCATGGACTaGCTGCCGTGTGAGTGTGCGGGACAGCACACACCG | + |
|
Preference number: 6 (lower is better) Translates to: CIELCSILQSMD*LPCECAGQHTP Trigger: CGGTGTGTGCTGTCCCGCACACTCACACGGCAGCAAGTCCATGCTCTGCAGGATGGAGCAGAGCTCTATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | CTGCACTGCTGCATAGAGCTCTGCTCCATCCTGCAGAGCATGGACTaGCTGCCGTGTGAGTGTGCGGGACAGCACACACCGCTGTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LHCCIELCSILQSMD*LPCECAGQHTPLCC Trigger: ACAACACAGCGGTGTGTGCTGTCCCGCACACTCACACGGCAGCAAGTCCATGCTCTGCAGGATGGAGCAGAGCTCTATGCAGCAGTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | TGGGCCCTACTTGCTGGTCTGGCCTCTGTGCTGGCTGGGGGTTCCTaGTGGAATCACCGGGAAACGCTTGTTCATTTCCTCCCACGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WALLAGLASVLAGGS*WNHRETLVHFLPRS Trigger: ACTCCGTGGGAGGAAATGAACAAGCGTTTCCCGGTGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAGGGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | GAACATGCAGAAGGAGCCCTGTCTCCTACTGCAGCCTaGAGGGAGATCCGGGGCAGGGTGGATGACTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: EHAEGALSPTAA*REIRGRVDDFV Trigger: TACAAAGTCATCCACCCTGCCCCGGATCTCCCTGCAGGCTGCAGTAGGAGACAGGGCTCCTTCTGCATGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | GCTGGTCTGGCCTCTGTGCTGGCTGGGGGTTCCTTGTaGAATCACCGGGAAACGCTTGTTCATTTCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGLASVLAGGSL*NHRETLVHFLP Trigger: TGGGAGGAAATGAACAAGCGTTTCCCGGTGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | GAAAGAACCCCAGCCTGCTGTGCCAGCGAGCAGGCCTTGTGCTGTTaGCAGAAATCTTTAGCCTTAGGGAGTCTGGGGCTTCCAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ERTPACCASEQALCC*QKSLALGSLGLPEV Trigger: CACCTCTGGAAGCCCCAGACTCCCTAAGGCTAAAGATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGGGGTTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | GAGTGTCTCCAGGGATGCCCTTTAGACAGAAGCTCTTaGGCAGGTGAGGTAAGATGTGGGCGCTGGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ECLQGCPLDRSS*AGEVRCGRWAP Trigger: AGGAGCCCAGCGCCCACATCTTACCTCACCTGCTCAAGAGCTTCTGTCTAAAGGGCATCCCTGGAGACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | GAATCACAGTCCGGCAGAGAAACGCCACTGGTCTTCTaGAATGGCGTTCTCCTCCGCGGGGAACTGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESQSGRETPLVF*NGVLLRGELGS Trigger: AGAACCCAGTTCCCCGCGGAGGAGAACGCCATTTCAGAAGACCAGTGGCGTTTCTCTGCCGGACTGTGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | CCACTCTTTACAAGAGCCATGAGTGGAGGGTCTAGCTaGGCCCTGACAGCGTACCACCCATCTGTGAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PLFTRAMSGGSS*ALTAYHPSVSS Trigger: CGAACTCACAGATGGGTGGTACGCTGTCAGGGCCCAGCTAGACCCTCCACTCATGGCTCTTGTAAAGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | CCAGCCTGCTGTGCCAGCGAGCAGGCCTTGTGCTGTTaGCAGAAATCTTTAGCCTTAGGGAGTCTGGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PACCASEQALCC*QKSLALGSLGL Trigger: AAGCCCCAGACTCCCTAAGGCTAAAGATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | CTTGCTGGTCTGGCCTCTGTGCTGGCTGGGGGTTCCTaGTGGAATCACCGGGAAACGCTTGTTCATTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAGLASVLAGGS*WNHRETLVHFL Trigger: GAGGAAATGAACAAGCGTTTCCCGGTGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | AACAAGGAGGCTGAAAGGCTGGGTCTGACAGTCTGCTaGAGTGAAGGGACTCCCTGGGCTGGTAAACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: NKEAERLGLTVC*SEGTPWAGKPG Trigger: TCCAGGTTTACCAGCCCAGGGAGTCCCTTCACTTCAGCAGACTGTCAGACCCAGCCTTTCAGCCTCCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | TCTGTGCAGCTGGAGAGACAAAGGTACAGATGGGACTaGCCGGGGACGGTAAGGGCAGCCGACTTAGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SVQLERQRYRWD*PGTVRAADLGN Trigger: ATTTCCTAAGTCGGCTGCCCTTACCGTCCCCGGTCAGTCCCATCTGTACCTTTGTCTCTCCAGCTGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | CAGCTAATTTCTCACTGCTGTCGCCTCTACAGTCCCTaGGAGACTCCTTCCTGGACCTGGGCCCTACTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLISHCCRLYSP*ETPSWTWALLA Trigger: AGCAAGTAGGGCCCAGGTCCAGGAAGGAGTCTCTCAGGGACTGTAGAGGCGACAGCAGTGAGAAATTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | AGAACCCCAGCCTGCTGTGCCAGCGAGCAGGCCTTGTaGTGTTTGCAGAAATCTTTAGCCTTAGGGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTPACCASEQAL*CLQKSLALGSL Trigger: CAGACTCCCTAAGGCTAAAGATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGGGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | AAGGTCGGCACTCCTGATGTGGATTCTGGCTGGCACTaGAGGTTGCTTGCGGCAATTAGCACACGTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KVGTPDVDSGWH*RLLAAISTRGF Trigger: AAAGCCACGTGTGCTAATTGCCGCAAGCAACCTCCAGTGCCAGCCAGAATCCACATCAGGAGTGCCGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | GTTCTCTCCACTCCAAGACTTTGCTGCCATCTGGGCTaGGTGAGCCAGGGGCATAGACTTCCCTTTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VLSTPRLCCHLG*VSQGHRLPFQC Trigger: ACACTGAAAGGGAAGTCTATGCCCCTGGCTCACTCAGCCCAGATGGCAGCAAAGTCTTGGAGTGGAGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | GCAAATAAGGTCGGCACTCCTGATGTGGATTCTGGCTaGCACTGGAGGTTGCTTGCGGCAATTAGCACACGT | + |
|
Preference number: 6 (lower is better) Translates to: ANKVGTPDVDSG*HWRLLAAISTR Trigger: ACGTGTGCTAATTGCCGCAAGCAACCTCCAGTGCCAGCCAGAATCCACATCAGGAGTGCCGACCTTATTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | TGTTCATTTCCTCCCACGGAGTCAGGCGTAAGGGCCTaGGTGCTGAGCAAGGCAAGTTCTTCATCAGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: CSFPPTESGVRA*VLSKASSSSAT Trigger: AGTAGCTGATGAAGAACTTGCCTTGCTCAGCACCCAGGCCCTTACGCCTGACTCCGTGGGAGGAAATGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | GAAAGAACCCCAGCCTGCTGTGCCAGCGAGCAGGCCTaGTGCTGTTTGCAGAAATCTTTAGCCTTAGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ERTPACCASEQA*CCLQKSLALGS Trigger: ACTCCCTAAGGCTAAAGATTTCTGCAAACAGCACAAGGCCTGCTCGCTGGCACAGCAGGCTGGGGTTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS TCA 72 bp | CTCTTCGCTGAAACAAGCCTCAAGGTGATCTGGGTCTaGTGCATACTGCACTGCTGCATAGAGCTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFAETSLKVIWV*CILHCCIELCS Trigger: GGAGCAGAGCTCTATGCAGCAGTGCAGTATGCATCAGACCCAGATCACCTTGAGGCTTGTTTCAGCGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | CTGGGTGCTGAGCAAGGCAAGTTCTTCATCAGCTACTaGATCACAGTCCGGCAGAGAAACGCCACTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGAEQGKFFISY*ITVRQRNATGL Trigger: AAGACCAGTGGCGTTTCTCTGCCGGACTGTGATTCAGTAGCTGATGAAGAACTTGCCTTGCTCAGCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS GCA 72 bp | CTTGCCATCATTGGAGGGGATCAGCCATCCACCATCTaGCAACTGAAAGCCTTTGCCAGCACACAGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAIIGGDQPSTI*QLKAFASTQIF Trigger: GAAGATCTGTGTGCTGGCAAAGGCTTTCAGTTGGCAGATGGTGGATGGCTGATCCCCTCCAATGATGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | GCACTCCTGATGTGGATTCTGGCTGGCACTGGAGGTTaGTTGCGGCAATTAGCACACGTGGCTTTATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ALLMWILAGTGG*LRQLAHVALCL Trigger: AAGACATAAAGCCACGTGTGCTAATTGCCGCAAGCAACCTCCAGTGCCAGCCAGAATCCACATCAGGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | GCCATGGGAGAGTTCTTGAGACTAGGCCCTTGTGTGTaGCTGAGGTCTTCTTCCTGGAGTTCCACTGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: AMGEFLRLGPCV*LRSSSWSSTEL Trigger: AAGTTCAGTGGAACTCCAGGAAGAAGACCTCAGCCACACACAAGGGCCTAGTCTCAAGAACTCTCCCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | TTTAATAGGTGTTGCGTATTTCGTGCCACAGCTCCGTaGCGGCTGAAAAGCCTTCTGTGCAGCTGGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FNRCCVFRATAP*RLKSLLCSWRD Trigger: GTCTCTCCAGCTGCACAGAAGGCTTTTCAGCCGCCACGGAGCTGTGGCACGAAATACGCAACACCTATTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 72 bp | ATCTACTGCCATGGGAGAGTTCTTGAGACTAGGCCCTaGTGTGTGGCTGAGGTCTTCTTCCTGGAGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IYCHGRVLETRP*CVAEVFFLEFH Trigger: GTGGAACTCCAGGAAGAAGACCTCAGCCACACACAAGGGCCTAGTCTCAAGAACTCTCCCATGGCAGTAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | GCCCTGACAGCGTACCACCCATCTGTGAGTTCGATCGTGTCCACTTaGTTGGCATCCTCACCACTAGTTTTACCGCCTGAAGTTTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALTAYHPSVSSIVST*LASSPLVLPPEVSD Trigger: GTCTGAAACTTCAGGCGGTAAAACTAGTGGTGAGGATGCCAACAAAGTGGACACGATCGAACTCACAGATGGGTGGTACGCTGTCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 72 bp | GCGTACCACCCATCTGTGAGTTCGATCGTGTCCACTTaGTTGGCATCCTCACCACTAGTTTTACCGCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: AYHPSVSSIVST*LASSPLVLPPE Trigger: TTCAGGCGGTAAAACTAGTGGTGAGGATGCCAACAAAGTGGACACGATCGAACTCACAGATGGGTGGTACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 72 bp | CTCCTGATGTGGATTCTGGCTGGCACTGGAGGTTGCTaGCGGCAATTAGCACACGTGGCTTTATGTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLMWILAGTGGC*RQLAHVALCLH Trigger: ATGAAGACATAAAGCCACGTGTGCTAATTGCCGCAAGCAACCTCCAGTGCCAGCCAGAATCCACATCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS TCA 72 bp | CTCTTTCTCAGCGGATTCCAGGGCCTTCCGGAATTCTaGCTGGATCCGCGCTTGTTTCTTATCATTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LFLSGFQGLPEF*LDPRLFLIIQH Trigger: ATGCTGAATGATAAGAAACAAGCGCGGATCCAGTCAGAATTCCGGAAGGCCCTGGAATCCGCTGAGAAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | TGGACTTTGGTGAACAAGGCCTCTAGTTTCTTCTGCTaGGCCTCTGCAAATCTCAGTGCTTCCTTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: WTLVNKASSFFC*ASANLSASFSS Trigger: AGAGGAGAAGGAAGCACTGAGATTTGCAGAGGCCCAGCAGAAGAAACTAGAGGCCTTGTTCACCAAAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | CGGGACAGCACACACCGCTGTGTTGTGTCTTCTTCGTaGTCTTTAAACTCTGTGTGGACTTTGGTGAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: RDSTHRCVVSSS*SLNSVWTLVNK Trigger: CTTGTTCACCAAAGTCCACACAGAGTTTAAAGACCACGAAGAAGACACAACACAGCGGTGTGTGCTGTCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS TCA 72 bp | TCAAACCTGCATTTTTCACAGTGGCAGAAGTGTCAGTaGGAGTGGTTGGCCAGCTTCCAGTGTCAACTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SNLHFSQWQKCQ*EWLASFQCQLN Trigger: GTTCAGTTGACACTGGAAGCTGGCCAACCACTCTCACTGACACTTCTGCCACTGTGAAAAATGCAGGTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
||
| CDS TCA 72 bp | GTCTGTAGTTGTTCAAGGCTCTTAGCTGCTCTTCGCTaGAACAAGCCTCAAGGTGATCTGGGTCTGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VCSCSRLLAALR*NKPQGDLGLMH Trigger: ATGCATCAGACCCAGATCACCTTGAGGCTTGTTTCAGCGAAGAGCAGCTAAGAGCCTTGAACAACTACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | CTTGCTGTGATCTGTCTGACCTACAGAGGGATCCACTaGGAGGTGAAGATCAGTATCTTTCCACTCCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LAVICLTYRGIH*EVKISIFPLLR Trigger: TCTAAGGAGTGGAAAGATACTGATCTTCACCTCCCAGTGGATCCCTCTGTAGGTCAGACAGATCACAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | CAGAAGGGTCCACAGGTAACCGGCTCTAAAGACATGTaGTGTGTGAACAAGCTTCTGTCTTTTACTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QKGPQVTGSKDM*CVNKLLSFTVP Trigger: TGGCACAGTAAAAGACAGAAGCTTGTTCACACACCACATGTCTTTAGAGCCGGTTACCTGTGGACCCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | TTCTCAGCGGATTCCAGGGCCTTCCGGAATTCTGACTaGATCCGCGCTTGTTTCTTATCATTCAGCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSADSRAFRNSD*IRACFLSFSIC Trigger: ACAAATGCTGAATGATAAGAAACAAGCGCGGATCCAGTCAGAATTCCGGAAGGCCCTGGAATCCGCTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | CCTGAAAGTAGGCCTCCTTTGGACTGGCAGAAAATATaGAAAAATGGCCAGCAAATAAGGTCGGCACTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PESRPPLDWQKI*KNGQQIRSALL Trigger: CAGGAGTGCCGACCTTATTTGCTGGCCATTTTTCCATATTTTCTGCCAGTCCAAAGGAGGCCTACTTTCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | TCATCTACATCTTCATCTACTGCCATGGGAGAGTTCTaGAGACTAGGCCCTTGTGTGTGGCTGAGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSTSSSTAMGEF*RLGPCVWLRSS Trigger: AGAAGACCTCAGCCACACACAAGGGCCTAGTCTCAAGAACTCTCCCATGGCAGTAGATGAAGATGTAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | GTGTCTTCTTCGTGGTCTTTAAACTCTGTGTGGACTTaGGTGAACAAGGCCTCTAGTTTCTTCTGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSSSWSLNSVWT*VNKASSFFCWA Trigger: GGCCCAGCAGAAGAAACTAGAGGCCTTGTTCACCAAAGTCCACACAGAGTTTAAAGACCACGAAGAAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 90 bp | TTTCCACCTGCAGTGCTAAATCCAGAGAATACAGATGAATTGACATaGCCTGGGAGGGGTTTTGGGAGTGACAATACACCCTGGGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: FPPAVLNPENTDELT*PGRGFGSDNTPWVL Trigger: TAGCACCCAGGGTGTATTGTCACTCCCAAAACCCCTCCCAGGCAATGTCAATTCATCTGTATTCTCTGGATTTAGCACTGCAGGTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | AACTGTGATTTCATCTTGAAAGGCGGGACGAAGACTTTGGTGGATTaGCCTGAATGTCTGGTCCTTTCGGTTCTTGTGGCAGAAACGTCG | + |
|
Preference number: 6 (lower is better) Translates to: NCDFILKGGTKTLVD*PECLVLSVLVAETS Trigger: CGACGTTTCTGCCACAAGAACCGAAAGGACCAGACATTCAGGCAAATCCACCAAAGTCTTCGTCCCGCCTTTCAAGATGAAATCACAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 90 bp | GCAGCCGACTTAGGAAATCCAAGGCTCTTCTTTTTCGACAGGTTTTaGGGTCATCAATCTCGTTCTCTCCACTCCAAGACTTTGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AADLGNPRLFFFDRF*GHQSRSLHSKTLLP Trigger: TGGCAGCAAAGTCTTGGAGTGGAGAGAACGAGATTGATGACCCAAAAACCTGTCGAAAAAGAAGAGCCTTGGATTTCCTAAGTCGGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | GCAGTGCTAAATCCAGAGAATACAGATGAATTGACATaGCCTGGGAGGGGTTTTGGGAGTGACAATACACCC | + |
|
Preference number: 6 (lower is better) Translates to: AVLNPENTDELT*PGRGFGSDNTP Trigger: GGGTGTATTGTCACTCCCAAAACCCCTCCCAGGCAATGTCAATTCATCTGTATTCTCTGGATTTAGCACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | CCACCTGCAGTGCTAAATCCAGAGAATACAGATGAATaGACATTGCCTGGGAGGGGTTTTGGGAGTGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: PPAVLNPENTDE*TLPGRGFGSDN Trigger: ATTGTCACTCCCAAAACCCCTCCCAGGCAATGTCAATTCATCTGTATTCTCTGGATTTAGCACTGCAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | ATAGACTTCCTGATACTCGGAGAAAGACAGGCTGCTTaGCTTGTTCTAGACACCATTTGCTTCCCTGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: IDFLILGERQAA*LVLDTICFPAM Trigger: CATTGCAGGGAAGCAAATGGTGTCTAGAACAAGTCAAGCAGCCTGTCTTTCTCCGAGTATCAGGAAGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | AGGAAAGCTTTGTTTAACTCCAGCCGAACCTTCAAATaGCTTGCTGTGATCTGTCTGACCTACAGAGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RKALFNSSRTFK*LAVICLTYRGI Trigger: GATCCCTCTGTAGGTCAGACAGATCACAGCAAGCAATTTGAAGGTTCGGCTGGAGTTAAACAAAGCTTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | CTTGTTCCAAGCTTATCACCCTGTTCTCTAAGCCATTTTCTGCCTTaGGATAGAGAAGACTCTCTGACACAAGTTTTCCTACTGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVPSLSPCSLSHFLP*DREDSLTQVFLLSS Trigger: GGAGGACAGTAGGAAAACTTGTGTCAGAGAGTCTTCTCTATCCAAAGGCAGAAAATGGCTTAGAGAACAGGGTGATAAGCTTGGAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | AACATGGCTGTCGTTCCCGTCTTCCCTGTCTCCATCTGTGCTCTTTaGGTTCTTTCCCTCCAAATTAACGTTCTTGCTATTGAAATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NMAVVPVFPVSICAL*VLSLQINVLAIEMF Trigger: GAACATTTCAATAGCAAGAACGTTAATTTGGAGGGAAAGAACCAAAAGAGCACAGATGGAGACAGGGAAGACGGGAACGACAGCCATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | TGCTTCCCTGCAATGGAGTCTTCAAGTGATTCAAAATaGTGTCCTTCATGTTCCTTATCTACCACAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CFPAMESSSDSK*CPSCSLSTTVS Trigger: GGAGACTGTGGTAGATAAGGAACATGAAGGACAGCATTTTGAATCACTTGAAGACTCCATTGCAGGGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | GGGTTTTCCTGTGATTCAAAGCTAATGCTGCTGAGTTaGACTGCTGAAGGAAGACATGCTGAAACTAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: GFSCDSKLMLLS*TAEGRHAETKT Trigger: AGTCTTAGTTTCAGCATGTCTTCCTTCAGCAGTGCAACTCAGCAGCATTAGCTTTGAATCACAGGAAAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | AGGGTGGATGACTTTGTAAGATACAGACTGCCTGGCTaGAGACGGAGATGTCGCCTTTCTTTGTTTTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: RVDDFVRYRLPG*RRRCRLSLFLI Trigger: AATTAAAAACAAAGAAAGGCGACATCTCCGTCTGCAGCCAGGCAGTCTGTATCTTACAAAGTCATCCACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | TGTGTTGTGTCTTCTTCGTGGTCTTTAAACTCTGTGTaGACTTTGGTGAACAAGGCCTCTAGTTTCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CVVSSSWSLNSV*TLVNKASSFFC Trigger: GCAGAAGAAACTAGAGGCCTTGTTCACCAAAGTCCACACAGAGTTTAAAGACCACGAAGAAGACACAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | TATAGACTTCCTGATACTCGGAGAAAGACAGGCTGCTaGACTTGTTCTAGACACCATTTGCTTCCCTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: YRLPDTRRKTGC*TCSRHHLLPCN Trigger: ATTGCAGGGAAGCAAATGGTGTCTAGAACAAGTCAAGCAGCCTGTCTTTCTCCGAGTATCAGGAAGTCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | CCCAATCCACATGCAGAGGCTTCATGTTCTTCTGTAAAGGTTGAGTaGGTCATACTATCTGAGAAAACAGTACCCAAAGTCTCGTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PNPHAEASCSSVKVE*VILSEKTVPKVSSS Trigger: ACTTGACGAGACTTTGGGTACTGTTTTCTCAGATAGTATGACCAACTCAACCTTTACAGAAGAACATGAAGCCTCTGCATGTGGATTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | ACACTGAAGCAACAGAATCATGGTGTGCACTTGAAGAGAATCCTCTaGGTCCTACTTTTGCAGAAGGCTCCTCACTATTTTCAATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TLKQQNHGVHLKRIL*VLLLQKAPHYFQCH Trigger: GTGACATTGAAAATAGTGAGGAGCCTTCTGCAAAAGTAGGACCAAGAGGATTCTCTTCAAGTGCACACCATGATTCTGTTGCTTCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | TATGTTTACTACTTGCAACAACCTTCCCTAATTCTCTaGAAGGCGACTGGTCCAGTGGTAGAGTTTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: YVYYLQQPSLIL*KATGPVVEFDF Trigger: GAAGTCAAACTCTACCACTGGACCAGTCGCCTTTCAGAGAATTAGGGAAGGTTGTTGCAAGTAGTAAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | CCTGTCTGGGTTTCATTTAGACCAGAAAGGTTTGACTaGGACCATCTACTATCTGAACACTGTACAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PVWVSFRPERFD*DHLLSEHCTAS Trigger: TGAAGCTGTACAGTGTTCAGATAGTAGATGGTCTCAGTCAAACCTTTCTGGTCTAAATGAAACCCAGACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | GAGACCATCTACTATCTGAACACTGTACAGCTTCATTaGAGATTTCCTCATTCTGGCTGTAAAAGGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ETIYYLNTVQLH*RFPHSGCKRAS Trigger: AGAAGCCCTTTTACAGCCAGAATGAGGAAATCTGCAATGAAGCTGTACAGTGTTCAGATAGTAGATGGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
||
| CDS GCA 72 bp | TCTGACACAAGTTTTCCTACTGTCCTCCGTATAATATaGCAAAGCAGAATCTTCAGTGACTGGGTAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SDTSFPTVLRII*QSRIFSDWVRG Trigger: TCCTCTTACCCAGTCACTGAAGATTCTGCTTTGGCATATTATACGGAGGACAGTAGGAAAACTTGTGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS GCA 72 bp | ACTTGTATCCCAAGTTTCCAAACCAACAGGTGGTGTTaGAGCTTTCTTCAGTCCAGACATACTTTGGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: TCIPSFQTNRWC*SFLQSRHTLVM Trigger: CATAACCAAAGTATGTCTGGACTGAAGAAAGCTGCAACACCACCTGTTGGTTTGGAAACTTGGGATACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS GCA 72 bp | CATCCCTCTCCAGTATCTTCTTTAGAGCCGATCTCCTaGTGTTGTCAATTTCCACATCGTATCTGTATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPSPVSSLEPIS*CCQFPHRICIS Trigger: TGAAATACAGATACGATGTGGAAATTGACAACAGCAGGAGATCGGCTCTAAAGAAGATACTGGAGAGGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | TTCCACTCCTTAGAAGCGGTACTTAAAACAACCATCTaGTTTCCAGGCACTTCAGATGTATTCTGTGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: FHSLEAVLKTTI*FPGTSDVFCAM Trigger: CATAGCACAGAATACATCTGAAGTGCCTGGAAACCAGATGGTTGTTTTAAGTACCGCTTCTAAGGAGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CCA 72 bp | CAAGTTGTTGACTTTCTCCTGAAAGTAGGCCTCCTTTaGACTGGCAGAAAATATGGAAAAATGGCCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QVVDFLLKVGLL*TGRKYGKMASK Trigger: TTTGCTGGCCATTTTTCCATATTTTCTGCCAGTCCAAAGGAGGCCTACTTTCAGGAGAAAGTCAACAACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 72 bp | AGATTTCCTCATTCTGGCTGTAAAAGGGCTTCTGGCTaGTTACACCTGGATCTAAAGGATCACTCTCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RFPHSGCKRASG*LHLDLKDHSLL Trigger: TAAGAGAGAGTGATCCTTTAGATCCAGGTGTAACAAGCCAGAAGCCCTTTTACAGCCAGAATGAGGAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
||
| CDS CAA 72 bp | CAACAGAATCATGGTGTGCACTTGAAGAGAATCCTCTaGGTCCTACTTTTGCAGAAGGCTCCTCACTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: QQNHGVHLKRIL*VLLLQKAPHYF Trigger: AAAATAGTGAGGAGCCTTCTGCAAAAGTAGGACCAAGAGGATTCTCTTCAAGTGCACACCATGATTCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 72 bp | CAACTGTGTGTCTTGGTTTCTCTCCATCTGAGAGAGTaGGAGAGAAACTTCAATAGATTGAGTATTGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: QLCVLVSLHLRE*ERNFNRLSIAR Trigger: TCGGGCAATACTCAATCTATTGAAGTTTCTCTCCAACTCTCTCAGATGGAGAGAAACCAAGACACACAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 72 bp | TTAGGAAATCCAAGGCTCTTCTTTTTCGACAGGTTTTaGGGTCATCAATCTCGTTCTCTCCACTCCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LGNPRLFFFDRF*GHQSRSLHSKT Trigger: AGTCTTGGAGTGGAGAGAACGAGATTGATGACCCAAAAACCTGTCGAAAAAGAAGAGCCTTGGATTTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
||
| CDS CAA 90 bp | CTTCATTGCAGATTTCCTCATTCTGGCTGTAAAAGGGCTTCTGGCTaGTTACACCTGGATCTAAAGGATCACTCTCTCTTAGTTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: LHCRFPHSGCKRASG*LHLDLKDHSLLVPF Trigger: AAATGGAACTAAGAGAGAGTGATCCTTTAGATCCAGGTGTAACAAGCCAGAAGCCCTTTTACAGCCAGAATGAGGAAATCTGCAATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
||
| CDS TCA 72 bp | AATTCTCTGAAAGGCGACTGGTCCAGTGGTAGAGTTTaGCTTCGTTCTTTGAACATTATTGGAGTTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: NSLKGDWSSGRV*LRSLNIIGVEA Trigger: TGCTTCAACTCCAATAATGTTCAAAGAACGAAGTCAAACTCTACCACTGGACCAGTCGCCTTTCAGAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | TCTACCACAGGGTCCACTTTGGTCTTCTTTTTGCTGTaGGTTTTATGTTTACTACTTGCAACAACCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: STTGSTLVFFLL*VLCLLLATTFP Trigger: AGGGAAGGTTGTTGCAAGTAGTAAACATAAAACTCACAGCAAAAAGAAGACCAAAGTGGACCCTGTGGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | TGTCCTCCGTATAATATGCCAAAGCAGAATCTTCAGTaGCTGGGTAAGAGGACTGACAAATACAGCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: CPPYNMPKQNLQ*LGKRTDKYSKF Trigger: GAATTTGCTGTATTTGTCAGTCCTCTTACCCAGTCACTGAAGATTCTGCTTTGGCATATTATACGGAGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | GTTCTTGCTATTGAAATGTTCATCTCCGTGAAACTGTaGTTTCATCTTGAAAGGCGGGACGAAGACTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: VLAIEMFISVKL*FHLERRDEDFG Trigger: ACCAAAGTCTTCGTCCCGCCTTTCAAGATGAAATCACAGTTTCACGGAGATGAACATTTCAATAGCAAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | CTGGATGCTGGGCCGTTCAAATTTACTCTTCGATTTTaGCACTGCAAGATGATAGATTCTGTATCTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LDAGPFKFTLRF*HCKMIDSVSLS Trigger: GGAAAGAGATACAGAATCTATCATCTTGCAGTGTCAAAATCGAAGAGTAAATTTGAACGGCCCAGCATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | ATCCACTTCAACTCCCAGACTCTCAGAAATAGGTTTTaGTGTCTGACCCTCCTTGAGTTTTGGTGTATAAAA | + |
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Preference number: 6 (lower is better) Translates to: IHFNSQTLRNRF*CLTLLEFWCIK Trigger: TTTTATACACCAAAACTCAAGGAGGGTCAGACACCAAAACCTATTTCTGAGAGTCTGGGAGTTGAAGTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | AAGGTCAATGGTACTTCAAAAGCACTTGCTTCAAGCTaGGCTGAAAGATTAGTAAGCTCTAACTGTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: KVNGTSKALASS*AERLVSSNCLC Trigger: ACACAGACAGTTAGAGCTTACTAATCTTTCAGCCCAGCTTGAAGCAAGTGCTTTTGAAGTACCATTGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | CTCCGTATAATATGCCAAAGCAGAATCTTCAGTGACTaGGTAAGAGGACTGACAAATACAGCAAATTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: LRIICQSRIFSD*VRGLTNTANSR Trigger: CCTAGAATTTGCTGTATTTGTCAGTCCTCTTACCCAGTCACTGAAGATTCTGCTTTGGCATATTATACGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | AGATTTACTTGTATCCCAAGTTTCCAAACCAACAGGTaGTGTTGCAGCTTTCTTCAGTCCAGACATACTTTG | + |
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Preference number: 6 (lower is better) Translates to: RFTCIPSFQTNR*CCSFLQSRHTL Trigger: CAAAGTATGTCTGGACTGAAGAAAGCTGCAACACCACCTGTTGGTTTGGAAACTTGGGATACAAGTAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | AACCCAGATGCTAGAAATAAGCTTTGGATCCACACCTaGAGTGTCACACAGAGCCCTATAAAATTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NPDARNKLWIHT*SVTQSPIKFFF Trigger: AAAGAAGAATTTTATAGGGCTCTGTGTGACACTCCAGGTGTGGATCCAAAGCTTATTTCTAGCATCTGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | GTAAGGTTATTTTTCCTGTCTGGGTTTCATTTAGACCAGAAAGGTTaGACTGAGACCATCTACTATCTGAACACTGTACAGCTTCATTGC | + |
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Preference number: 6 (lower is better) Translates to: VRLFFLSGFHLDQKG*TETIYYLNTVQLHC Trigger: GCAATGAAGCTGTACAGTGTTCAGATAGTAGATGGTCTCAGTCAAACCTTTCTGGTCTAAATGAAACCCAGACAGGAAAAATAACCTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | CCTCCAAAATTATGGTTCAAGACTGGATCCAAGAACTCTGACCATTaGTCTGAACAATCACTGTTCCCATCTGATTTCATATTCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PPKLWFKTGSKNSDH*SEQSLFPSDFIFKE Trigger: CTCCTTGAATATGAAATCAGATGGGAACAGTGATTGTTCAGACAAATGGTCAGAGTTCTTGGATCCAGTCTTGAACCATAATTTTGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | ATTAAACAAAGTCTCATTTTGGGGGCATGTAAACAGTaGGCATTTGGCATGAGTCTGTTCAGAATCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: IKQSLILGACKQ*AFGMSLFRICQ Trigger: CTGACAGATTCTGAACAGACTCATGCCAAATGCTCACTGTTTACATGCCCCCAAAATGAGACTTTGTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | ACTGTCTCCCTCAAGCACGTGTATAAGCTTCTTTTCTaGCTCCTTGTAAAATGTATCGATATTCTCAATAGC | + |
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Preference number: 6 (lower is better) Translates to: TVSLKHVYKLLF*LLVKCIDILNS Trigger: GCTATTGAGAATATCGATACATTTTACAAGGAGGCAGAAAAGAAGCTTATACACGTGCTTGAGGGAGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | TTTTTCCTGTCTGGGTTTCATTTAGACCAGAAAGGTTaGACTGAGACCATCTACTATCTGAACACTGTACAG | + |
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Preference number: 6 (lower is better) Translates to: FFLSGFHLDQKG*TETIYYLNTVQ Trigger: CTGTACAGTGTTCAGATAGTAGATGGTCTCAGTCAAACCTTTCTGGTCTAAATGAAACCCAGACAGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | TTCCCATCTGATTTCATATTCAAGGAGGAATTTGACTaGAAATCTTTGTCTTCGGTTCCTTTCTGGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FPSDFIFKEEFD*KSLSSVPFWCC Trigger: GCAGCACCAGAAAGGAACCGAAGACAAAGATTTCAAGTCAAATTCCTCCTTGAATATGAAATCAGATGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | ACTGGATGCTGGGCCGTTCAAATTTACTCTTCGATTTaGACACTGCAAGATGATAGATTCTGTATCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TGCWAVQIYSSI*TLQDDRFCISF Trigger: GAAAGAGATACAGAATCTATCATCTTGCAGTGTCAAAATCGAAGAGTAAATTTGAACGGCCCAGCATCCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | TGTTCAGTTCTGATCAAATCAAACTCCTCTAACATTCCTTTAACTTaGTGTAAGGCACTTTCTGAAACTGTGACCAGTTTTCCACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CSVLIKSNSSNIPLT*CKALSETVTSFPPA Trigger: TGCAGGTGGAAAACTGGTCACAGTTTCAGAAAGTGCCTTACACAAAGTTAAAGGAATGTTAGAGGAGTTTGATTTGATCAGAACTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | CCTTTACTTTCTATTATCCTGTCAAATTCATTTAATAAGCTTCTTTaGATTGGGGGTTGTCCAACTGCGTCAACAGTCACTCCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLLSIILSNSFNKLL*IGGCPTASTVTPPL Trigger: AAGAGGAGGAGTGACTGTTGACGCAGTTGGACAACCCCCAATCAAAAGAAGCTTATTAAATGAATTTGACAGGATAATAGAAAGTAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | TTTCATATTCAGGATGCTGCTGAGCTGGTAATTGACTaGCAGTTACAATTGGGAAATGGTCTTCAAATACCT | + |
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Preference number: 6 (lower is better) Translates to: FHIQDAAELVID*QLQLGNGLQIP Trigger: AGGTATTTGAAGACCATTTCCCAATTGTAACTGTCAGTCAATTACCAGCTCAGCAGCATCCTGAATATGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | ATAGCTATGACACACATTAGGGTCACTAAGGAGGGTTaGCACTTGGTTTTCAGAGACATGATTTGTATCAAT | + |
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Preference number: 6 (lower is better) Translates to: IAMTHIRVTKEG*HLVFRDMICIN Trigger: ATTGATACAAATCATGTCTCTGAAAACCAAGTGTCAACCCTCCTTAGTGACCCTAATGTGTGTCATAGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | CTATTATCCTGTCAAATTCATTTAATAAGCTTCTTTTaGTTGGGGGTTGTCCAACTGCGTCAACAGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: LLSCQIHLISFF*LGVVQLRQQSL Trigger: GAGTGACTGTTGACGCAGTTGGACAACCCCCAATCAAAAGAAGCTTATTAAATGAATTTGACAGGATAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | TTATGGTTCAAGACTGGATCCAAGAACTCTGACCATTaGTCTGAACAATCACTGTTCCCATCTGATTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LWFKTGSKNSDH*SEQSLFPSDFI Trigger: TATGAAATCAGATGGGAACAGTGATTGTTCAGACAAATGGTCAGAGTTCTTGGATCCAGTCTTGAACCATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS GCA 72 bp | GGAAGTATTTTTGATACGTCTTCAGGTATAGGTGAATaGTGGAGAGTATGTTCAGTTCTGATCAAATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GSIFDTSSGIGE*WRVCSVLIKSN Trigger: GTTTGATTTGATCAGAACTGAACATACTCTCCAGCATTCACCTATACCTGAAGACGTATCAAAAATACTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | GAATTTGACTTGAAATCTTTGTCTTCGGTTCCTTTCTaGTGCTGCTCTATATTATTTCTGCTCTTCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: EFDLKSLSSVPF*CCSILFLLFSV Trigger: TACAGAGAAGAGCAGAAATAATATAGAGCAGCACCAGAAAGGAACCGAAGACAAAGATTTCAAGTCAAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CCA 72 bp | AGTATTTTTGATACGTCTTCAGGTATAGGTGAATGCTaGAGAGTATGTTCAGTTCTGATCAAATCAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SIFDTSSGIGEC*RVCSVLIKSNS Trigger: GGAGTTTGATTTGATCAGAACTGAACATACTCTCCAGCATTCACCTATACCTGAAGACGTATCAAAAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | GATGGCTCTTCAGGATCATTCGGTAAACAGCGTTTTTaGTCAGAAGAATCTGGTATACCTGAATTTACATTT | + |
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Preference number: 6 (lower is better) Translates to: DGSSGSFGKQRF*SEESGIPEFTF Trigger: AAATGTAAATTCAGGTATACCAGATTCTTCTGACAAAAAACGCTGTTTACCGAATGATCCTGAAGAGCCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044620.11 ENSMUST00000202003.4 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | GCTTGTCTGGCAAGTGTCTGGTTTACTCTGTCTGTTTaGCTCAACTATTTTATAACAGTTATCTGTGACTAT | + |
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Preference number: 6 (lower is better) Translates to: ACLASVWFTLSV*LNYFITVICDY Trigger: ATAGTCACAGATAACTGTTATAAAATAGTTGAGCAAAACAGACAGAGTAAACCAGACACTTGCCAGACAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | TCTATTATCCTGTCAAATTCATTTAATAAGCTTCTTTaGATTGGGGGTTGTCCAACTGCGTCAACAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: SIILSNSFNKLL*IGGCPTASTVT Trigger: AGTGACTGTTGACGCAGTTGGACAACCCCCAATCAAAAGAAGCTTATTAAATGAATTTGACAGGATAATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 90 bp | CGGCAGGTAAATCACTGTCACCTTTATGAATATAAACTGGGCCACTaGTACTTGACATACTACCATCAGAGTTTTCTAAATTATTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RQVNHCHLYEYKLGH*YLTYYHQSFLNYFF Trigger: AAAGAAATAATTTAGAAAACTCTGATGGTAGTATGTCAAGTACAAGTGGCCCAGTTTATATTCATAAAGGTGACAGTGATTTACCTGCCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS CAA 72 bp | GCAAAATCTTCTGTGTGTTCCTTTACACACTCAATTTaGATAGTATTTCTTGTTCCAAGCTTATCACCCTGT | + |
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Preference number: 6 (lower is better) Translates to: AKSSVCSFTHSI*IVFLVPSLSPC Trigger: ACAGGGTGATAAGCTTGGAACAAGAAATACTATCAAAATTGAGTGTGTAAAGGAACACACAGAAGATTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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| CDS TCA 72 bp | AATTTCAGTTCTGATAATGACCAAACTATGTTCATATaGGGCATTTCCTGCAAAATCTTCTGTGTGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: NFSSDNDQTMFI*GISCKIFCVFL Trigger: AAGGAACACACAGAAGATTTTGCAGGAAATGCCTCATATGAACATAGTTTGGTCATTATCAGAACTGAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044620.11 ENSMUST00000202313.2 |
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