Pregenerated sensors for BRCA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017146Ensembl transcript IDs: ENSMUST00000017290.11, ENSMUST00000142086.3, ENSMUST00000190862.2, ENSMUST00000191198.2
Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCCTCTTCTGCAGAGTGCAGCTTGCCTTCATCTCCAGCTTCTTaGGGGGCGGTCTGTAACAATTCCTGGTCTCTCACACTGCAATCA | + |
|
Preference number: 1 (lower is better) Translates to: AASSAECSLPSSPAS*GAVCNNSWSLTLQS Trigger: TGATTGCAGTGTGAGAGACCAGGAATTGTTACAGACCGCCCCTCAAGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 90 bp | TTGCGGGTGAGTCCACTTCTCTCTATCACTAAGGGAGTCAGCGTTTaGACCTACCTTTTCCCCAGTGCTGGGAACCTGCCTGTCGTTACA | + |
|
Preference number: 1 (lower is better) Translates to: LRVSPLLSITKGVSV*TYLFPSAGNLPVVT Trigger: TGTAACGACAGGCAGGTTCCCAGCACTGGGGAAAAGGTAGGTCCAAACGCTGACTCCCTTAGTGATAGAGAGAAGTGGACTCACCCGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 90 bp | TGCCCTCAGAAAACTCACAAGCAGCCTCTTCTGCAGAGTGCAGCTTaGCTTCATCTCCAGCTTCTTGAGGGGCGGTCTGTAACAATTCCT | + |
|
Preference number: 1 (lower is better) Translates to: CPQKTHKQPLLQSAA*LHLQLLEGRSVTIP Trigger: AGGAATTGTTACAGACCGCCCCTCAAGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGCTGCTTGTGAGTTTTCTGAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 90 bp | TTCAATGTTTCTTATGCCCTCAGAAAACTCACAAGCAGCCTCTTCTaGAGAGTGCAGCTTGCCTTCATCTCCAGCTTCTTGAGGGGCGGT | + |
|
Preference number: 1 (lower is better) Translates to: FNVSYALRKLTSSLF*RVQLAFISSFLRGG Trigger: ACCGCCCCTCAAGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGCTGCTTGTGAGTTTTCTGAGGGCATAAGAAACATTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 90 bp | TGGGAACCTGCCTGTCGTTACATGTTCCTTTACTTGCAGCCCATCTaGTCTGCTGGCTCACTGCTATGCCAGGCTGTTTGCTTTTATTAC | + |
|
Preference number: 1 (lower is better) Translates to: WEPACRYMFLYLQPI*SAGSLLCQAVCFYY Trigger: GTAATAAAAGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAACGACAGGCAGGTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 90 bp | TGCCTGTTTTTCTTCACTGATCTCACGATTCCAAGGTTAGACAGCTaGACACCTAGGCTGTCCTTCAAGGTGGCATTTCCAGGTTCGACC | + |
|
Preference number: 1 (lower is better) Translates to: CLFFFTDLTIPRLDS*TPRLSFKVAFPGST Trigger: GGTCGAACCTGGAAATGCCACCTTGAAGGACAGCCTAGGTGTCCAGCTGTCTAACCTTGGAATCGTGAGATCAGTGAAGAAAAACAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 90 bp | CCATCTCTTTCCACCAAATGCTGTGATTATAGGCAAGTACCACCATaGCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAA | + |
|
Preference number: 1 (lower is better) Translates to: PSLSTKCCDYRQVPP*PAQISQATLLSLQE Trigger: TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTTGCCTATAATCACAGCATTTGGTGGAAAGAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR GCA 90 bp | ACCTGCCTGTCGTTACATGTTCCTTTACTTGCAGCCCATCTGCTCTaGTGGCTCACTGCTATGCCAGGCTGTTTGCTTTTATTACAGAAT | + |
|
Preference number: 1 (lower is better) Translates to: TCLSLHVPLLAAHLL*WLTAMPGCLLLLQN Trigger: ATTCTGTAATAAAAGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAACGACAGGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR TCA 90 bp | CCTATTCTGGGTGTTGTTTGGTGCTGGCTACTAAACCTGGAGCCTTaGGGAGCACTGATTTTAAGTCAAACCACAGATCTCAAGCCATCT | + |
|
Preference number: 1 (lower is better) Translates to: PILGVVWCWLLNLEP*GALILSQTTDLKPS Trigger: AGATGGCTTGAGATCTGTGGTTTGACTTAAAATCAGTGCTCCTCAAGGCTCCAGGTTTAGTAGCCAGCACCAAACAACACCCAGAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CCA 90 bp | TGCCTGTCGTTACATGTTCCTTTACTTGCAGCCCATCTGCTCTGCTaGCTCACTGCTATGCCAGGCTGTTTGCTTTTATTACAGAATTCA | + |
|
Preference number: 1 (lower is better) Translates to: CLSLHVPLLAAHLLC*LTAMPGCLLLLQNS Trigger: TGAATTCTGTAATAAAAGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAACGACAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR TCA 90 bp | TCAATGAGCAATAAACTGCTGGTCTCAGGCTGTAATGAGCTGGCATaGGCATCTGTGCCACATGGCTCCACACACACATTTGAAATAGAA | + |
|
Preference number: 1 (lower is better) Translates to: SMSNKLLVSGCNELA*ASVPHGSTHTFEIE Trigger: TTCTATTTCAAATGTGTGTGTGGAGCCATGTGGCACAGATGCTCATGCCAGCTCATTACAGCCTGAGACCAGCAGTTTATTGCTCATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 90 bp | GTTACATGTTCCTTTACTTGCAGCCCATCTGCTCTGCTGGCTCACTaGTATGCCAGGCTGTTTGCTTTTATTACAGAATTCAGCCTTTTC | + |
|
Preference number: 1 (lower is better) Translates to: VTCSFTCSPSALLAH*YARLFAFITEFSLF Trigger: GAAAAGGCTGAATTCTGTAATAAAAGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR TCA 90 bp | GTCAGTTCCCTGATTTATGTTGTCAGGAGTCCTTTGAACACCTGCTaGATCTGCTTTCTTGATGAAGTCCTCAGGTTGAAGGGATGTACT | + |
|
Preference number: 1 (lower is better) Translates to: VSSLIYVVRSPLNTC*ICFLDEVLRLKGCT Trigger: AGTACATCCCTTCAACCTGAGGACTTCATCAAGAAAGCAGATTCAGCAGGTGTTCAAAGGACTCCTGACAACATAAATCAGGGAACTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 90 bp | AGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAACGATATaGAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: SSDQPSHSTVSPRTI*NRLASCSIGGIKLS Trigger: AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR GCA 90 bp | AGGACCACTAGCTATTTGTTCTTCAGTCATATACAACTCACGACATaGCCATCTCTTTCCACCAAATGCTGTGATTATAGGCAAGTACCA | + |
|
Preference number: 1 (lower is better) Translates to: RTTSYLFFSHIQLTT*PSLSTKCCDYRQVP Trigger: TGGTACTTGCCTATAATCACAGCATTTGGTGGAAAGAGATGGGCATGTCGTGAGTTGTATATGACTGAAGAACAAATAGCTAGTGGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 90 bp | GCACTTGAAAAACCTCACATTCACATCAAATACATAATCTGGCTCTaGATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: ALEKPHIHIKYIIWL*ISSVSCTNPILGVV Trigger: AACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCCAGATTATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 90 bp | CAGATCTCAAGCCATCTCCTTGAAGGACTTGACTCTTGGCCTTTATaGACATGCAATTTTATAAGGAACAAATCAGGACCACTAGCTATT | + |
|
Preference number: 1 (lower is better) Translates to: QISSHLLEGLDSWPL*TCNFIRNKSGPLAI Trigger: AATAGCTAGTGGTCCTGATTTGTTCCTTATAAAATTGCATGTTCATAAAGGCCAAGAGTCAAGTCCTTCAAGGAGATGGCTTGAGATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 90 bp | GAAGTTAACATTTCACCAGTTCTGGAAAACCACTCATTAACTTTCTaGACGCTGCTATTTAGTGTTATCCAAGGAACATCGGTGGTAGCT | + |
|
Preference number: 1 (lower is better) Translates to: EVNISPVLENHSLTF*TLLFSVIQGTSVVA Trigger: AGCTACCACCGATGTTCCTTGGATAACACTAAATAGCAGCGTTCAGAAAGTTAATGAGTGGTTTTCCAGAACTGGTGAAATGTTAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 90 bp | CTCTCCAAGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTaGGATAAAGCTTTCTCAGGTGAAAACTTTTTGTGTTCAAGACAG | + |
|
Preference number: 1 (lower is better) Translates to: LSKNDMQQISILLNW*DKAFSGENFLCSRQ Trigger: CTGTCTTGAACACAAAAAGTTTTCACCTGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCTTGGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 90 bp | AAAGCAACAACTCCTTTCCTGGTGGAATCCATCATTGTACAGACATaGAATATTCATATCAGAGTCCGTGTATTTAAAGAAGAATGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: KATTPFLVESIIVQT*NIHIRVRVFKEEWV Trigger: AACCCATTCTTCTTTAAATACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGGAAAGGAGTTGTTGCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CCA 90 bp | AAAGGGAAGAAATTACTTCAAAGAAAGCAACAACTCCTTTCCTGGTaGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: KGKKLLQRKQQLLSW*NPSLYRHEIFISES Trigger: GGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGGAAAGGAGTTGTTGCTTTCTTTGAAGTAATTTCTTCCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR GCA 90 bp | CCAACACAACAGCTGCTTCAGCATTTGACTCGTGCCTCCTGGCAGATGCGCTGTTGGCATGAGCATCTGTaGCACATGGCTCCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: PTQQLLQHLTRASWQMRCWHEHL*HMAPHT Trigger: TGTGTGTGGAGCCATGTGGCACAGATGCTCATGCCA...ACAGCGCATCTGCCAGGAGGCACGAGTCAAATGCTGAAGCAGCTGTTGTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR GCA 90 bp | CCACTTCGTTTGAAACTTCCAACACAACAGCTGCTTCAGCATTTGACTCGTGCCGCTCTGCTGGCTCACTaGTATGCCAGGCTGTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PLRLKLPTQQLLQHLTRAALLAH*YARLFA Trigger: AGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGC...GGCACGAGTCAAATGCTGAAGCAGCTGTTGTGTTGGAAGTTTCAAACGAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACTTCGTTTGAAACTTCCAACACAACAGCTGCTTCAGCATTTGACTCGTGCCCCAAGGTTAGACAGCTaGACACCTAGGCTGTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PLRLKLPTQQLLQHLTRAPRLDS*TPRLSF Trigger: GAAGGACAGCCTAGGTGTCCAGCTGTCTAACCTTGG...GGCACGAGTCAAATGCTGAAGCAGCTGTTGTGTTGGAAGTTTCAAACGAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR TCA 90 bp | CCACTTCGTTTGAAACTTCCAACACAACAGCTGCTTCAGCATTTGACTCGTGCCTCATCTCCAGCTTCTTaGGGGGCGGTCTGTAACAAT | + |
|
Preference number: 2 (lower is better) Translates to: PLRLKLPTQQLLQHLTRASSPAS*GAVCNN Trigger: ATTGTTACAGACCGCCCCTCAAGAAGCTGGAGATGA...GGCACGAGTCAAATGCTGAAGCAGCTGTTGTGTTGGAAGTTTCAAACGAAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR TCA 90 bp | CATTTGGCTCCATTAGGTCAGTTCCCTGATTTATGTTGTCAGGAGTCCTTTGAAGTCACATGGTTCAGGTaGGGGCGGCTTCCCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HLAPLGQFPDLCCQESFEVTWFR*GRLPFL Trigger: GAGAAAGGGAAGCCGCCCTCACCTGAACCATGTGAC...TTCAAAGGACTCCTGACAACATAAATCAGGGAACTGACCTAATGGAGCCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGTTAGTAAGTAGGGTGTaGAAGCACCAAAGACTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKLVSRV*KHQRLR Trigger: TCTCAGTCTTTGGTGCTTCCACACCCTACTTACTAA...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAGCATCTTGCTCAATTaGTGGGATAAAGCTTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKSILLN*WDKAFS Trigger: TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCT...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTCAATGTTTCTTATGCCCTCAGAAAACTCACAAGCAGCCTCTTCTGCAGATTTCCAGGTTCGACCTaGGGAAGCCTTCTGACACGG | + |
|
Preference number: 2 (lower is better) Translates to: MFNVSYALRKLTSSLFCRFPGST*GSLLTR Trigger: CCGTGTCAGAAGGCTTCCCCAGGTCGAACCTGGAAA...TCTGCAGAAGAGGCTGCTTGTGAGTTTTCTGAGGGCATAAGAAACATTGAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGATTTCTTTCGAGGTTGGGTCTGCCTGTTTTTCTTCACTGATCTCACGAGGCTGTCCTTCAAGGTaGCATTTCCAGGTTCGACCT | + |
|
Preference number: 2 (lower is better) Translates to: RQISFEVGSACFSSLISRGCPSR*HFQVRP Trigger: AGGTCGAACCTGGAAATGCCACCTTGAAGGACAGCC...TCGTGAGATCAGTGAAGAAAAACAGGCAGACCCAACCTCGAAAGAAATCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR TCA 90 bp | CATTTGGCTCCATTAGGTCAGTTCCCTGATTTATGTTGTCAGGAGTCCTTTGAATGTAATGAGCTGGCATaGGCATCTGTGCCACATGGC | + |
|
Preference number: 2 (lower is better) Translates to: HLAPLGQFPDLCCQESFECNELA*ASVPHG Trigger: GCCATGTGGCACAGATGCTCATGCCAGCTCATTACA...TTCAAAGGACTCCTGACAACATAAATCAGGGAACTGACCTAATGGAGCCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR GCA 90 bp | CATTTGGCTCCATTAGGTCAGTTCCCTGATTTATGTTGTCAGGAGTCCTTTGAAGCCTCTTCTGCAGAGTaGAGCTTGCCTTCATCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: HLAPLGQFPDLCCQESFEASSAE*SLPSSP Trigger: TGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGC...TTCAAAGGACTCCTGACAACATAAATCAGGGAACTGACCTAATGGAGCCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTACTACCTGCTATTTTGTTCTCCTGACAGTTACTGGTAGTACTCACTGCTTGCTACCTTTTCCCCAGTaGTGGGAACCTGCCTGTCGT | + |
|
Preference number: 2 (lower is better) Translates to: ITTCYFVLLTVTGSTHCLLPFPQ*WEPACR Trigger: ACGACAGGCAGGTTCCCAGCACTGGGGAAAAGGTAG...CAAGCAGTGAGTACTACCAGTAACTGTCAGGAGAACAAAATAGCAGGTAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAAAACTCACAAGCAGCCTCTTCTGCAGAGTGCAGCTTGCCTTCATCTCCAGATTTCTTTCGAGGTTaGGTCTGCCTGTTTTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SENSQAASSAECSLPSSPDFFRG*VCLFFF Trigger: GAAGAAAAACAGGCAGACCCAACCTCGAAAGAAATC...TGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGCTGCTTGTGAGTTTTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGCACAAACCCTATTCTaGGTGTTGTTTGGTGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RRLSLTLALEKPHIHIKYAQTLF*VLFGAG Trigger: GCCAGCACCAAACAACACCCAGAATAGGGTTTGTGC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAAATCACTTACACTGTTGCTTATAGATTTGGCTCCTGCTGTGGAAGCAGGCCTGTTTTTCTTCACTaGTCTCACGATTCCAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LQITYTVAYRFGSCCGSRPVFLH*SHDSKV Trigger: AACCTTGGAATCGTGAGATCAGTGAAGAAAAACAGG...CCTGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAGTGTAAGTGATTTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAAATCACTTACACTGTTGCTTATAGATTTGGCTCCTGCTGTGGAAGCAGGATTAGGTCAGTTCCCTaGTTTATGTTGTCAGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LQITYTVAYRFGSCCGSRIRSVP*FMLSGV Trigger: GACTCCTGACAACATAAATCAGGGAACTGACCTAAT...CCTGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAGTGTAAGTGATTTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATTCTGGGTGTTGTTTaGTGCTGGCTACTAAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: RRLSLTLALEKPHIHIKYILGVV*CWLLNL Trigger: CAGGTTTAGTAGCCAGCACCAAACAACACCCAGAAT...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR GCA 90 bp | GAGATTACTACCTGCTATTTTGTTCTCCTGACAGTTACTGGTAGTACTCACTGCTTTCGAGGTTGGGTCTaGCTGTTTTTCTTCACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: EITTCYFVLLTVTGSTHCFRGWV*LFFFTD Trigger: ATCAGTGAAGAAAAACAGGCAGACCCAACCTCGAAA...GCAGTGAGTACTACCAGTAACTGTCAGGAGAACAAAATAGCAGGTAGTAATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTACTGCTCATAAGCTATaGGGAATTAGAAGGCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCTAHKL*GIRRLS Trigger: GGAGAGCCTTCTAATTCCCCATAGCTTATGAGCAGT...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR CCA 90 bp | ATCACTTACACTGTTGCTTATAGATTTGGCTCCTGCTGTGGAAGCAGGTTCCTTCTCTTGTGTTATCTGTaGTTCTGTAATAAATGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: ITYTVAYRFGSCCGSRFLLLCYL*FCNKCA Trigger: GGCACATTTATTACAGAACCACAGATAACACAAGAG...AAGGAACCTGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAGTGTAAGTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CAA 90 bp | AACAGATACACTGCTCATAAGCTATGGGGAATTAGAAGGCTCTCCTaGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATA | + |
|
Preference number: 2 (lower is better) Translates to: NRYTAHKLWGIRRLS*TLALEKPHIHIKYI Trigger: TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCTAATTCCCCATAGCTTATGAGCAGTGTATCTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 90 bp | ACGTTTAATTCTACCTCCAAATCACTTACACTGTTGCTTATAGATTaGGCTCCTGCTGTGGAAGCAGGTTCCTTTCTCAATGATTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TFNSTSKSLTLLLID*APAVEAGSFLNDSV Trigger: AACTGAATCATTGAGAAAGGAACCTGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAGTGTAAGTGATTTGGAGGTAGAATTAAACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGACTCTTGGCCTTTATaGACATGCAATTTTATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RRLSLTLALEKPHIHIKYDSWPL*TCNFIR Trigger: CCTTATAAAATTGCATGTTCATAAAGGCCAAGAGTC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR TCA 90 bp | CATTTGGCTCCATTAGGTCAGTTCCCTGATTTATGTTGTCAGGAGTCCTTTGAACACTCATTAACTTTCTaGACGCTGCTATTTAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HLAPLGQFPDLCCQESFEHSLTF*TLLFSV Trigger: AACACTAAATAGCAGCGTTCAGAAAGTTAATGAGTG...TTCAAAGGACTCCTGACAACATAAATCAGGGAACTGACCTAATGGAGCCAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATAATCTTGCTCAATTGGTaGGATAAAGCTTTCTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RLSLTLALEKPHIHIKYIILLNW*DKAFSG Trigger: ACCTGAGAAAGCTTTATCCCACCAATTGAGCAAGAT...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 90 bp | TTACTTCAAAGAAAGCAACAACTCCTTTCCTGGTGGAATCCATCATaGTACAGACATGAAATATTCATATCAGAGTCCGTGTATTTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLQRKQQLLSWWNPS*YRHEIFISESVYLK Trigger: CTTTAAATACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGGAAAGGAGTTGTTGCTTTCTTTGAAGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTTATCTGTGGTTCTGTAATAAATGTGCCTATAATTTCAGTCACATGGTTCCTCCACACACACATTTaGAATAGAAATACTCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: CVICGSVINVPIISVTWFLHTHI*NRNTLT Trigger: TGTCAGAGTATTTCTATTTCAAATGTGTGTGTGGAG...GAACCATGTGACTGAAATTATAGGCACATTTATTACAGAACCACAGATAACACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | GCTGGGAACCTGCCTGTCGTTACATGTTCCTTTACTTaGAGCCCATCTGCTCTGCTGGCTCACTGCTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGNLPVVTCSFT*SPSALLAHCYA Trigger: GGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAACGACAGGCAGGTTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAACACAACAGCTGCTTCAGCATTTGACTCGTGCCTCCTGGCAGATGCGCTGTTCTGCAGAGTGCAGCTaGCCTTCATCTCCAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTQQLLQHLTRASWQMRCSAECS*PSSPAS Trigger: AGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGA...ACAGCGCATCTGCCAGGAGGCACGAGTCAAATGCTGAAGCAGCTGTTGTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | GCCTGTCGTTACATGTTCCTTTACTTGCAGCCCATCTaGTCTGCTGGCTCACTGCTATGCCAGGCTGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ACRYMFLYLQPI*SAGSLLCQAVC Trigger: GCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAACGACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR TCA 72 bp | TCTGCAGAGTGCAGCTTGCCTTCATCTCCAGCTTCTTaGGGGGCGGTCTGTAACAATTCCTGGTCTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SAECSLPSSPAS*GAVCNNSWSLT Trigger: TGTGAGAGACCAGGAATTGTTACAGACCGCCCCTCAAGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | AAAACTCACAAGCAGCCTCTTCTGCAGAGTGCAGCTTaGCTTCATCTCCAGCTTCTTGAGGGGCGGTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KTHKQPLLQSAA*LHLQLLEGRSV Trigger: TACAGACCGCCCCTCAAGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGCTGCTTGTGAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | GCGTTTGGACCTACCTTTTCCCCAGTGCTGGGAACCTaGCTGTCGTTACATGTTCCTTTACTTGCAGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: AFGPTFSPVLGT*LSLHVPLLAAH Trigger: ATGGGCTGCAAGTAAAGGAACATGTAACGACAGGCAGGTTCCCAGCACTGGGGAAAAGGTAGGTCCAAACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 72 bp | GGGAGTCAGCGTTTGGACCTACCTTTTCCCCAGTGCTaGGAACCTGCCTGTCGTTACATGTTCCTTTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSQRLDLPFPQC*EPACRYMFLYL Trigger: CAAGTAAAGGAACATGTAACGACAGGCAGGTTCCCAGCACTGGGGAAAAGGTAGGTCCAAACGCTGACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 72 bp | AGTCCACTTCTCTCTATCACTAAGGGAGTCAGCGTTTaGACCTACCTTTTCCCCAGTGCTGGGAACCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SPLLSITKGVSV*TYLFPSAGNLP Trigger: AGGCAGGTTCCCAGCACTGGGGAAAAGGTAGGTCCAAACGCTGACTCCCTTAGTGATAGAGAGAAGTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 72 bp | AGGCGGATGCATGAAAAATACTTAGTAAGTAGGGTGTaGAAGCACCAAAGACTGAGAGGTGCTCCCCGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RRMHEKYLVSRV*KHQRLRGAPRA Trigger: TGCCCGGGGAGCACCTCTCAGTCTTTGGTGCTTCCACACCCTACTTACTAAGTATTTTTCATGCATCCGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR GCA 72 bp | TCTTATGCCCTCAGAAAACTCACAAGCAGCCTCTTCTaGAGAGTGCAGCTTGCCTTCATCTCCAGCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SYALRKLTSSLF*RVQLAFISSFL Trigger: CAAGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGCTGCTTGTGAGTTTTCTGAGGGCATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 72 bp | ACACAACAGCTGCTTCAGCATTTGACTCGTGCCTCCTaGCAGATGCGCTGTCAGAAGTTAACATTTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQQLLQHLTRAS*QMRCQKLTFHQ Trigger: CTGGTGAAATGTTAACTTCTGACAGCGCATCTGCCAGGAGGCACGAGTCAAATGCTGAAGCAGCTGTTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTTCTCAAGCCATCTCCTaGAAGGACTTGACTCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGSQAIS*KDLTLG Trigger: GCCAAGAGTCAAGTCCTTCAAGGAGATGGCTTGAGA...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR GCA 72 bp | TCGTTACATGTTCCTTTACTTGCAGCCCATCTGCTCTaGTGGCTCACTGCTATGCCAGGCTGTTTGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLHVPLLAAHLL*WLTAMPGCLLL Trigger: TAAAAGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | ACTTCCAACACAACAGCTGCTTCAGCATTTGACTCGTaGCTCCTGGCAGATGCGCTGTCAGAAGTTAACATT | + |
|
Preference number: 3 (lower is better) Translates to: TSNTTAASAFDS*LLADALSEVNI Trigger: AATGTTAACTTCTGACAGCGCATCTGCCAGGAGGCACGAGTCAAATGCTGAAGCAGCTGTTGTGTTGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 72 bp | TTCTTCACTGATCTCACGATTCCAAGGTTAGACAGCTaGACACCTAGGCTGTCCTTCAAGGTGGCATTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FFTDLTIPRLDS*TPRLSFKVAFP Trigger: TGGAAATGCCACCTTGAAGGACAGCCTAGGTGTCCAGCTGTCTAACCTTGGAATCGTGAGATCAGTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR TCA 72 bp | TTTGGCTCCTGCTGTGGAAGCAGGTTCCTTTCTCAATaGTTCAGTTGGATGAGCGCTTTTCTCTTTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FGSCCGSRFLSQ*FSWMSAFLFLE Trigger: CTCCAGAAAGAGAAAAGCGCTCATCCAACTGAATCATTGAGAAAGGAACCTGCTTCCACAGCAGGAGCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | TCCTTTACTTGCAGCCCATCTGCTCTGCTGGCTCACTaGTATGCCAGGCTGTTTGCTTTTATTACAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SFTCSPSALLAH*YARLFAFITEF Trigger: GAATTCTGTAATAAAAGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | CAGCCAAGCCACTCTACTGTCTCTCCAAGAACGATATaGAACAGATTAGCATCTTGCTCAATTGGTGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: QPSHSTVSPRTI*NRLASCSIGGI Trigger: TATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCTTGGAGAGACAGTAGAGTGGCTTGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CCA 72 bp | TTACATGTTCCTTTACTTGCAGCCCATCTGCTCTGCTaGCTCACTGCTATGCCAGGCTGTTTGCTTTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: LHVPLLAAHLLC*LTAMPGCLLLL Trigger: TAATAAAAGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTCAACAGATTAGCATCTaGCTCAATTGGTGGGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGQQISI*LNWWDK Trigger: TTTATCCCACCAATTGAGCAAGATGCTAATCTGTTG...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 72 bp | CTGCTCATAAGCTATGGGGAATTAGAAGGCTCTCCTTaGCACTGGCACTTGAAAAACCTCACATTCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: LLISYGELEGSP*HWHLKNLTFTS Trigger: TGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCTAATTCCCCATAGCTTATGAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 72 bp | GTGGAAGCAGGTTCCTTTCTCAATGATTCAGTTGGATaGGCGCTTTTCTCTTTCTGGAGATTACTACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VEAGSFLNDSVG*ALFSFWRLLPA Trigger: AGCAGGTAGTAATCTCCAGAAAGAGAAAAGCGCTCATCCAACTGAATCATTGAGAAAGGAACCTGCTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTTCAGGTGAAAACTTTTaGTGTTCAAGACAGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGSGENF*CSRQTS Trigger: TGAAGTCTGTCTTGAACACAAAAAGTTTTCACCTGA...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 72 bp | CTGATTTATGTTGTCAGGAGTCCTTTGAACACCTGCTaGATCTGCTTTCTTGATGAAGTCCTCAGGTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LIYVVRSPLNTC*ICFLDEVLRLK Trigger: CTTCAACCTGAGGACTTCATCAAGAAAGCAGATTCAGCAGGTGTTCAAAGGACTCCTGACAACATAAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCTCTTGTGTTATCTGTGGTTCTGTAATAAATGTGCCTATAATTTCAGTCTACATGTTCCTTTACTaGCAGCCCATCTGCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GCSCVICGSVINVPIISVYMFLY*QPICSA Trigger: AGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTA...GACTGAAATTATAGGCACATTTATTACAGAACCACAGATAACACAAGAGCAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR GCA 72 bp | TGGATGAGCGCTTTTCTCTTTCTGGAGATTACTACCTaGTATTTTGTTCTCCTGACAGTTACTGGTAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: WMSAFLFLEITT*YFVLLTVTGST Trigger: AGTACTACCAGTAACTGTCAGGAGAACAAAATAGCAGGTAGTAATCTCCAGAAAGAGAAAAGCGCTCATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR TCA 72 bp | AAACCTCACATTCACATCAAATACATAATCTGGCTCTaGATTTCCTCAGTGTCCTGCACAAACCCTATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KPHIHIKYIIWL*ISSVSCTNPIL Trigger: CAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCCAGATTATGTATTTGATGTGAATGTGAGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 72 bp | TCTTTCTGGAGATTACTACCTGCTATTTTGTTCTCCTaGCAGTTACTGGTAGTACTCACTGCTTGCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SFWRLLPAILFS*QLLVVLTACSF Trigger: AAATGAGCAAGCAGTGAGTACTACCAGTAACTGTCAGGAGAACAAAATAGCAGGTAGTAATCTCCAGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTAGGACCACTAGCTATTaGTTCTTCAGTCATATACAA | + |
|
Preference number: 3 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCRTTSY*FFSHIQ Trigger: TTGTATATGACTGAAGAACAAATAGCTAGTGGTCCT...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 72 bp | ATTTCACCAGTTCTGGAAAACCACTCATTAACTTTCTaGACGCTGCTATTTAGTGTTATCCAAGGAACATCG | + |
|
Preference number: 3 (lower is better) Translates to: ISPVLENHSLTF*TLLFSVIQGTS Trigger: CGATGTTCCTTGGATAACACTAAATAGCAGCGTTCAGAAAGTTAATGAGTGGTTTTCCAGAACTGGTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR TCA 72 bp | CCTGCTGAATCTGCTTTCTTGATGAAGTCCTCAGGTTaGAGGGATGTACTTCTCTTACGTTTTAATTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: PAESAFLMKSSG*RDVLLLRFNLF Trigger: AAATAAATTAAAACGTAAGAGAAGTACATCCCTTCAACCTGAGGACTTCATCAAGAAAGCAGATTCAGCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CCA 72 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTaGGATAAAGCTTTCTCAGGTGAAAACTTTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NDMQQISILLNW*DKAFSGENFLC Trigger: ACACAAAAAGTTTTCACCTGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR TCA 72 bp | ACTCCTTTCCTGGTGGAATCCATCATTGTACAGACATaGAATATTCATATCAGAGTCCGTGTATTTAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TPFLVESIIVQT*NIHIRVRVFKE Trigger: TTCTTTAAATACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGGAAAGGAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGTGGAGGAGCTCCTCCTaGGAGGGGGAGTTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKWRSSS*EGEFLF Trigger: AAAGAGAAACTCCCCCTCTCAGGAGGAGCTCCTCCA...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGGCTCTGCTGGCTCACTaGTATGCCAGGCTGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKALLAH*YARLFA Trigger: AGCAAACAGCCTGGCATAGCAGTGAGCCAGCAGAGC...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGCTACCTTTTCCCCAGTaGTGGGAACCTGCCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKLPFPQ*WEPACR Trigger: ACGACAGGCAGGTTCCCAGCACTGGGGAAAAGGTAG...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAAGTCATGGGTGAGCGATaGAAGCTCCTTCACCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQEVMGER*KLLHHG Trigger: TCCGTGGTGAAGGAGCTTCCATCGCTCACCCATGAC...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGTGGCATGAGCATCTGTaGCACATGGCTCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKWHEHL*HMAPHT Trigger: TGTGTGTGGAGCCATGTGGCACAGATGCTCATGCCA...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGACATGGAGAGAAGTCTaGACAGACAGCCTCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKTWREV*TDSLTL Trigger: GAGGGTGAGGCTGTCTGTGCAGACTTCTCTCCATGT...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGTTGAAGCTGGTGTGGTaGCAATGTGGGCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKLKLVW*QCGLAL Trigger: AAGAGCCAGCCCACATTGGCACCACACCAGCTTCAA...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGCAATATCTGGGCAGTTaGTGTCTTCTGTCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKQYLGS*CLLSRR Trigger: GCGCCTGGACAGAAGACAGCAACTGCCCAGATATTG...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGCCAAGGTTAGACAGCTaGACACCTAGGCTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKPRLDS*TPRLSF Trigger: GAAGGACAGCCTAGGTGTCCAGCTGTCTAACCTTGG...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGTTTCCCGGGATTCTCTaGATCGCCTTGGACCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKFPGIL*IALDLG Trigger: ACCAAGGTCCAAGGCGATCCAGAGAATCCCGGGAAA...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTAGGCCTTCCCATCCCTaGCTCGTCATCTCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGRPSHP*LVISTG Trigger: ACCAGTGGAGATGACGAGTCAGGGATGGGAAGGCCT...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAACGCCTTGGACCTTGGTaGTTTCTTCCAGTCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQERLGPW*FLPVTT Trigger: TGTTGTGACTGGAAGAAATCACCAAGGTCCAAGGCG...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTGTGTCTTCGATGAGTTaGGGCTCTCTAAGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGVSSMS*GSLRCP Trigger: CGGGCACCTTAGAGAGCCTCAACTCATCGAAGACAC...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTGCTAGCTTACCTTCTTaGCAGGGCACAGGTAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGASLPS*QGTGKP Trigger: GGGCTTACCTGTGCCCTGTCAAGAAGGTAAGCTAGC...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGCTCCGGAAAGCAACTTaGCCTTGGGGTATTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKLRKAT*PWGIFS Trigger: ACTGAAAATACCCCAAGGTCAAGTTGCTTTCCGGAG...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGACATGTTCCTTTACTTaGAGCCCATCTGCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKTCSFT*SPSALL Trigger: CAGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGT...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAACACAATTCCTACCACTaGTTTATCAGCACCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQEHNSYH*FISTSS Trigger: GCTGCTGGTGCTGATAAAGCAGTGGTAGGAATTGTG...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTTTTCCAGGTTCGACCTaGGGAAGCCTTCTGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGFPGST*GSLLTR Trigger: CCGTGTCAGAAGGCTTCCCCAGGTCGAACCTGGAAA...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATATAGATTTGGCTCCTaGTGTGGAAGCAGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQEYRFGS*CGSRFL Trigger: AAGGAACCTGCTTCCACAGCAGGAGCCAAATCTATA...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTCAGGCTGTAATGAGCTaGCATGAGCATCTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGQAVMS*HEHLCH Trigger: GTGGCACAGATGCTCATGCCAGCTCATTACAGCCTG...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGCCCATCTGCTCTGCTaGCTCACTGCTATGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYAHLLC*LTAMPG Trigger: GCCTGGCATAGCAGTGAGCCAGCAGAGCAGATGGGC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGTCACATGGTTCAGGTaGGGGCGGCTTCCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYVTWFR*GRLPFL Trigger: GAGAAAGGGAAGCCGCCCTCACCTGAACCATGTGAC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAAGAGATGCCTCTATCATaGTCACCTCATTATTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQEEMPLS*SPHYCS Trigger: ACTGCAATAATGAGGTGATCATGATAGAGGCATCTC...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTACGATCACAACTAGATaGGCACCTGTGTCATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGTITTR*APVSWV Trigger: CACCCATGACACAGGTGCTCATCTAGTTGTGATCGT...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTCTTCTTGGCATCCGCTaGAGGTTCAGTGTCTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGLLGIR*RFSVFD Trigger: ATCGAAGACACTGAACCTGCAGCGGATGCCAAGAAG...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGGATTTCTTTCGAGGTTaGGTCTGCCTGTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKDFFRG*VCLFFF Trigger: GAAGAAAAACAGGCAGACCCAACCTCGAAAGAAATC...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGCGGCTGGCTGTTGGTTaGAATGGTTTTTCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKRLAVG*NGFSLF Trigger: AAACAAAGAAAAACCATTCCAACCAACAGCCAGCCG...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTGATCTTCATCCTCAGTaGAGTCGCTCTCTTCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGDLHPQ*SRSLLT Trigger: CGTCAGAAGAGAGCGACTCCACTGAGGATGAAGATC...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATTCTTCCTGTCCCTaGCGTTCTTTTTGTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKNSSCP*RSFCLP Trigger: AGGTAAACAAAAAGAACGTCAGGGACAGGAAGAATT...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGGCAGCACTGTGCTGTaGAGAGAACATGCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYGSTVL*REHAAR Trigger: TCTGGCAGCATGTTCTCTTCACAGCACAGTGCTGCC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATAGCTACCCTTCCATGGTaGTTGGGTCCCCTCCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYIATLPW*LGPLRF Trigger: AAAGCGGAGGGGACCCAAGCACCATGGAAGGGTAGC...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGGTTAAAATATCACTCTaGGAGCAGTCTTCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKVKISL*EQSSER Trigger: CCTTTCTGAAGACTGCTCGCAGAGTGATATTTTAAC...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAACCTCTGTTTGGAAGGTaGAATAAAATTGGAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQEPLFGR*NKIGIL Trigger: CAGGATTCCAATTTTATTCCACCTTCCAAACAGAGG...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATATCTGTTCCTGTTCTCTaGGGGCTGGGATTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYISVPVL*GLGLTG Trigger: GCCTGTCAATCCCAGCCCTCAGAGAACAGGAACAGA...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGTTTGCATTTGCAGTTaGCCCTTGGGCAGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYVCICS*PLGSTV Trigger: CACAGTGCTGCCCAAGGGTCAACTGCAAATGCAAAC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATCACAACATCTCCTTTaGCTTCAAATTCATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQESQHLL*LQIHAH Trigger: ATGTGCATGAATTTGAAGTCAAAGGAGATGTTGTGA...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATTACCACTCATAGATTaGTCAAGATGGTCTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQELPLID*SRWSEN Trigger: ATTCTCAGACCATCTTGAGCAATCTATGAGTGGTAA...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACCTTGGCAGGCAAGACTaGCCTGTTGAATTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYLGRQD*PVELCG Trigger: GCCACACAATTCAACAGGGCAGTCTTGCCTGCCAAG...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAAGGCTGTTGGTTGGAATaGTTTTTCTTTGTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPPCPAQISQATLLSLQEGCWLE*FFFVSS Trigger: TGAAGAAACAAAGAAAAACCATTCCAACCAACAGCC...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCCCCTCCGCTTTCTCTaGCATACGCTGTGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSPLRFL*HTLCHS Trigger: GCTGTGACACAGCGTATGCCAGAGAAAGCGGAGGGG...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACACTCGTCATCTCCACTaGTGGGACCCTCCAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYTRHLH*WDPPDV Trigger: AACATCTGGAGGGTCCCACCAGTGGAGATGACGAGT...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 72 bp | GGGTGTTGTTTGGTGCTGGCTACTAAACCTGGAGCCTaGAGGAGCACTGATTTTAAGTCAAACCACAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GCCLVLATKPGA*RSTDFKSNHRS Trigger: AGATCTGTGGTTTGACTTAAAATCAGTGCTCCTCAAGGCTCCAGGTTTAGTAGCCAGCACCAAACAACACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTCCTGTTTTTCTTCACTaGTCTCACGATTCCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGPVFLH*SHDSKV Trigger: AACCTTGGAATCGTGAGATCAGTGAAGAAAAACAGG...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTTGTAATGAGCTGGCATaGGCATCTGTGCCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCCNELA*ASVPHG Trigger: GCCATGTGGCACAGATGCTCATGCCAGCTCATTACA...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATACCCGAGCCGGCTTCTTaGCAAGCATTTCCTCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYIPEPAS*QAFPLL Trigger: TAACAGAGGAAATGCTTGTCAAGAAGCCGGCTCGGG...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTGTCTCAGAGCAAACCTaGAAAACCTTACCACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGVSEQT*KTLPLI Trigger: TATGAGTGGTAAGGTTTTTCAGGTTTGCTCTGAGAC...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTGGCTGTCCTTCAAGGTaGCATTTCCAGGTTCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCGCPSR*HFQVRP Trigger: AGGTCGAACCTGGAAATGCCACCTTGAAGGACAGCC...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTCGTCATCTCCACTGGTaGGACCCTCCAGATGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCRHLHW*DPPDVV Trigger: TACAACATCTGGAGGGTCCCACCAGTGGAGATGACG...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCATTTGAGGGCACAGAGTaGGCACAGTCCTTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSFEGTE*AQSFWG Trigger: TCCCCAAAAGGACTGTGCTCACTCTGTGCCCTCAAA...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTGCCTCTTCTGCAGAGTaGAGCTTGCCTTCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSASSAE*SLPSSP Trigger: TGGAGATGAAGGCAAGCTGCACTCTGCAGAAGAGGC...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCAATCGGTCAGTGGTTTTaGCACTGGGCTCTCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSIGQWF*HWALLL Trigger: TAGGAGGAGAGCCCAGTGGCAAAACCACTGACCGAT...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTTATCCTCTACTGGTTTaGAGAAGTCTCTTCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGYPLLV*RSLFHF Trigger: AAAGTGGAAGAGACTTCTCCAAACCAGTAGAGGATA...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTGATATTATCCTCTACTaGTTTGGAGAAGTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGDIILY*FGEVSS Trigger: GGAAGAGACTTCTCCAAACCAGTAGAGGATAATATC...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTTGGATTTCTACTGATTaGTTCAAGTGGAAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGWISTD*FKWKST Trigger: TGTGCTCTTCCACTTGAACCAATCAGTAGAAATCCA...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACTGCCCGGCTGGCTGTTaGTTGGAATGGTTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYCPAGC*LEWFFF Trigger: AAAGAAAAACCATTCCAACCAACAGCCAGCCGGGCA...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTTTTGCAGTTGACCCTTaGGCAGCACTGTGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCFAVDP*AALCCE Trigger: TTCACAGCACAGTGCTGCCCAAGGGTCAACTGCAAA...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTGTTTGGTTCCAGATCTaGCAGGTCTTCCAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSVWFQI*QVFQGT Trigger: TGTGCCCTGGAAGACCTGCCAGATCTGGAACCAAAC...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 72 bp | ACTGCTCATAAGCTATGGGGAATTAGAAGGCTCTCCTaGACACTGGCACTTGAAAAACCTCACATTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: TAHKLWGIRRLS*TLALEKPHIHI Trigger: GATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCTAATTCCCCATAGCTTATGAGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 72 bp | CTGCTGTGGAAGCAGGTTCCTTTCTCAATGATTCAGTaGGATGAGCGCTTTTCTCTTTCTGGAGATTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLWKQVPFSMIQ*DERFSLSGDYY Trigger: GTAGTAATCTCCAGAAAGAGAAAAGCGCTCATCCAACTGAATCATTGAGAAAGGAACCTGCTTCCACAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| CDS-3UTR TCA 90 bp | ATCACTTACACTGTTGCTTATAGATTTGGCTCCTGCTGTGGAAGCAGGTTCCTTTGGAAACAGGTTCTTTaGTCAGTTCCAAACAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: ITYTVAYRFGSCCGSRFLWKQVL*SVPNRS Trigger: CGATCTGTTTGGAACTGATCAAAGAACCTGTTTCCA...AAGGAACCTGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAGTGTAAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| CDS-3UTR TCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTTCATCTCCAGCTTCTTaGGGGGCGGTCTGTAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSSSPAS*GAVCNN Trigger: ATTGTTACAGACCGCCCCTCAAGAAGCTGGAGATGA...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACAGGTTCCTTTCTCAATaGTTCAGTTGGATGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYRFLSQ*FSWMSA Trigger: AGCGCTCATCCAACTGAATCATTGAGAAAGGAACCT...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATTTCTACTTTCTCCTaGCTGAGGTTAAGCGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYISTFS*LRLSAC Trigger: ACACGCGCTTAACCTCAGTCAGGAGAAAGTAGAAAT...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTTCATTCCCACACTGGTaGCTCCTCTGTTTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSSFPHW*LLCLEG Trigger: ACCTTCCAAACAGAGGAGTCACCAGTGTGGGAATGA...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCAGGGGAGTTTCTCTTTTaGAGATGCCTAGAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSGEFLF*RCLEQP Trigger: TGGCTGCTCTAGGCATCTTCAAAAGAGAAACTCCCC...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCTGCAGAGTGCAGCTTaGCTTCATCTCCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSLQSAA*LHLQLL Trigger: AAGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAG...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCAAGAGCCCCTACTGCCTaGCAACGGAGATTTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSRAPTA*QRRFKR Trigger: CCTTTTAAATCTCCGTTGGCAGGCAGTAGGGGCTCT...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTAAGGGAGTCAGCGTTTaGACCTACCTTTTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSKGVSV*TYLFPS Trigger: ACTGGGGAAAAGGTAGGTCCAAACGCTGACTCCCTT...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACCTCAGCACAAGTAGGTaGGCTTGGATTTCTACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYLSTSR*AWISTD Trigger: ATCAGTAGAAATCCAAGCCCACCTACTTGTGCTGAG...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 72 bp | TCTACCTCCAAATCACTTACACTGTTGCTTATAGATTaGGCTCCTGCTGTGGAAGCAGGTTCCTTTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: STSKSLTLLLID*APAVEAGSFLN Trigger: ATTGAGAAAGGAACCTGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAGTGTAAGTGATTTGGAGGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| 3UTR CAA 72 bp | TGGACGTTTAATTCTACCTCCAAATCACTTACACTGTaGCTTATAGATTTGGCTCCTGCTGTGGAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WTFNSTSKSLTL*LIDLAPAVEAG Trigger: ACCTGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAGTGTAAGTGATTTGGAGGTAGAATTAAACGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATAGCTTCTGTAATGAGATaGTGGACAAAGCCTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYIASVMR*WTKPTT Trigger: GGTTGTAGGCTTTGTCCATCATCTCATTACAGAAGC...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTATCCGCTCTTTCTTCTaGAGATGTCAATTCCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCIRSFF*RCQFRL Trigger: AAGCCGGAATTGACATCTTCAGAAGAAAGAGCGGAT...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCAGTGAAGAGAACATGCTaGCAGAGCATCTTGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSVKRTC*QSILDP Trigger: AGGATCCAAGATGCTCTGGCAGCATGTTCTCTTCAC...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACCCTTATGTGTTCATTTaGCTCGTTCTTCTTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYPYVFI*LVLLGI Trigger: GATGCCAAGAAGAACGAGCCAAATGAACACATAAGG...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGGAAGGAGTCACCAGTaGAACATACTTCATGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYGRSHQ*NILHEY Trigger: GTATTCATGAAGTATGTTCCACTGGTGACTCCTTCC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTATAAAATTGGAATCCTaGGAGTTTGCATTTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGIKLES*EFAFAV Trigger: AACTGCAAATGCAAACTCCCAGGATTCCAATTTTAT...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 72 bp | GATTTTAAGTCAAACCACAGATCTCAAGCCATCTCCTaGAAGGACTTGACTCTTGGCCTTTATGAACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFKSNHRSQAIS*KDLTLGLYEHA Trigger: TGCATGTTCATAAAGGCCAAGAGTCAAGTCCTTCAAGGAGATGGCTTGAGATCTGTGGTTTGACTTAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTATGAAGTCCTCAGGTTaGAGGGATGTACTTCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCMKSSG*RDVLLL Trigger: TAAGAGAAGTACATCCCTTCAACCTGAGGACTTCAT...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTATTAGGTCAGTTCCCTaGTTTATGTTGTCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCIRSVP*FMLSGV Trigger: GACTCCTGACAACATAAATCAGGGAACTGACCTAAT...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTGCTATTTTGTTCTCCTaGCAGTTACTGGTAGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCAILFS*QLLVVL Trigger: GAGTACTACCAGTAACTGTCAGGAGAACAAAATAGC...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTGGATTGACAGGCCCTTaGGATTTTCTAGGACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSGLTGP*DFLGLE Trigger: TTCAAGTCCTAGAAAATCTCAAGGGCCTGTCAATCC...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTGTGTGCACTGTACTCTaGAGAATGTTCTCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSVCTVL*RMFSFP Trigger: GGGAAATGAGAACATTCTTCAGAGTACAGTGCACAC...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACCCTGTAGGCTCCTTTTaGTTATCTCATTCTTACACA | + |
|
Preference number: 4 (lower is better) Translates to: RRLSLTLALEKPHIHIKYPVGSF*LSHSYT Trigger: TGTGTAAGAATGAGATAACCAAAAGGAGCCTACAGG...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTAGAAGTCTTCTTTCTTaGATAGACCGGACCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSRSLLS*IDRTTH Trigger: ATGGGTGGTCCGGTCTATCCAAGAAAGAAGACTTCT...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCATGGAAACAGGTTCTTTaGTCAGTTCCAAACAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSWKQVL*SVPNRS Trigger: CGATCTGTTTGGAACTGATCAAAGAACCTGTTTCCA...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTTTTCGAGGTTGGGTCTaGCTGTTTTTCTTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSFRGWV*LFFFTD Trigger: ATCAGTGAAGAAAAACAGGCAGACCCAACCTCGAAA...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCATGGATGCCTTTCAGTTaGATGATTCTCAGTAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSWMPFS*MILSRV Trigger: AACCCTACTGAGAATCATGCAACTGAAAGGCATCCA...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCAGGTGCTTTTGAACTGTaGACGTTTAATTCTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSGAFEL*TFNSTS Trigger: GGAGGTAGAATTAAACGTCCACAGTTCAAAAGCACC...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATATCCAGATGTTGTAGTTaGAATTTGTCATCACAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYISRCCS*NLSSQA Trigger: CGCTTGTGATGACAAATTCCAACTACAACATCTGGA...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| 3UTR CAA 72 bp | AGAAAGCAACAACTCCTTTCCTGGTGGAATCCATCATaGTACAGACATGAAATATTCATATCAGAGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKQQLLSWWNPS*YRHEIFISESV Trigger: CACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGGAAAGGAGTTGTTGCTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATACTCCACACACACATTTaGAATAGAAATACTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYILHTHI*NRNTLT Trigger: TGTCAGAGTATTTCTATTTCAAATGTGTGTGTGGAG...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTCACTCATTAACTTTCTaGACGCTGCTATTTAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCHSLTF*TLLFSV Trigger: AACACTAAATAGCAGCGTTCAGAAAGTTAATGAGTG...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATAGTATTCTGCAAATACTaGGTATCAAGTTCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYIVFCKY*VSSSLS Trigger: AGACAGTGAACTTGATACTCAGTATTTGCAGAATAC...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCTGGAGATTACTACCTaGTATTTTGTTCTCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSLEITT*YFVLLT Trigger: TGTCAGGAGAACAAAATAGCAGGTAGTAATCTCCAG...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATACTCTTGTGTTATCTGTaGTTCTGTAATAAATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTLALEKPHIHIKYILLCYL*FCNKCA Trigger: GGCACATTTATTACAGAACCACAGATAACACAAGAG...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTGCGCTTTTCTCTTTCTaGAGATTACTACCTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSALFSF*RLLPAI Trigger: AATAGCAGGTAGTAATCTCCAGAAAGAGAAAAGCGC...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTATACTATCCTCTTCTTaGTCATTATCCTCTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCILSSS*SLSSSR Trigger: CCTAGAAGAGGATAATGACCAAGAAGAGGATAGTAT...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR TCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCATTTCCTCGTTATCTaGAATCAATTCCTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSHFLVI*NQFLVT Trigger: AGTGACAAGGAATTGATTTCAGATAACGAGGAAATG...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CCA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTGCGCTCTTCAAATTTTaGCTTACAGGATTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RTICNRLASCSIGGIKLSALFKF*LTGFSL Trigger: TAATGAGAATCCTGTAAGCCAAAATTTGAAGAGCGC...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR GCA 90 bp | AACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCATCTTTGTTTCTTCACTaGTACCACAACTATCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NDMQQISILLNWWDKAFSSLFLH*YHNYRF Trigger: AAATCGATAGTTGTGGTAGCAGTGAAGAAACAAAGA...TGAGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | GGCAGGTCTTCCAGGGCACAAGGGTCCGCTAGGAGGGAAGGGGAGTaGCCAGAAGGCTGGTTCCCACGCTGCTCCAGCACAGCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRSSRAQGSARREGE*PEGWFPRCSSTASR Trigger: CCTGGAAGCTGTGCTGGAGCAGCGTGGGAACCAGCCTTCTGGCCACTCCCCTTCCCTCCTAGCGGACCCTTGTGCCCTGGAAGACCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | TGGGTGAGCGATGGAAGCTCCTTCACCACGGAAGCCCCACACAGCTaGAGCATCCTCTCCAGCTCATCTTTGGGCATGTTGGTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WVSDGSSFTTEAPHS*SILSSSSLGMLVKG Trigger: GCCCTTCACCAACATGCCCAAAGATGAGCTGGAGAGGATGCTGCAGCTGTGTGGGGCTTCCGTGGTGAAGGAGCTTCCATCGCTCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 90 bp | CGCTTGGCTGCACGATCACAACTAGATGAGCACCTGTGTCATGGGTaGGCGATGGAAGCTCCTTCACCACGGAAGCCCCACACAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLAARSQLDEHLCHG*AMEAPSPRKPHTAA Trigger: TGCAGCTGTGTGGGGCTTCCGTGGTGAAGGAGCTTCCATCGCTCACCCATGACACAGGTGCTCATCTAGTTGTGATCGTGCAGCCAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | CTGTCCAACACCCAGTCCCACATCACAAGACGTGCCTTGCACAGCTaGCCAATATCTGGGCAGTTGCTGTCTTCTGTCCAGGCGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSNTQSHITRRALHS*PISGQLLSSVQALG Trigger: GCCAAGCGCCTGGACAGAAGACAGCAACTGCCCAGATATTGGGCAGCTGTGCAAGGCACGTCTTGTGATGTGGGACTGGGTGTTGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | ATACCAAGGATACGCTGGTGCTCTCCTCAGATCGGTCAGTGGTTTTaGCACTGGGCTCTCCTCCTAGGACCCGATCCCCGAGTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPRIRWCSPQIGQWF*HWALLLGPDPRVLW Trigger: CCAAAGAACTCGGGGATCGGGTCCTAGGAGGAGAGCCCAGTGGCAAAACCACTGACCGATCTGAGGAGAGCACCAGCGTATCCTTGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | CATGATCACCTCATTATTGCAGTCACTGCTGCTACCCTTCCATGGTaGTTGGGTCCCCTCCGCTTTCTCTGGCATACGCTGTGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HDHLIIAVTAATLPW*LGPLRFLWHTLCHS Trigger: GCTGTGACACAGCGTATGCCAGAGAAAGCGGAGGGGACCCAAGCACCATGGAAGGGTAGCAGCAGTGACTGCAATAATGAGGTGATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGCTCTCCAGCTCATCTTaGGGCATGTTGGTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKLSSSS*GMLVKG Trigger: GCCCTTCACCAACATGCCCAAAGATGAGCTGGAGAG...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAACCAATATCTGGGCAGTaGCTGTCTTCTGTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPPCPAQISQATLLSLQEPISGQ*LSSVQA Trigger: CGCCTGGACAGAAGACAGCAACTGCCCAGATATTGG...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 90 bp | TCGTTCTTCTTGGCATCCGCTGCAGGTTCAGTGTCTTCGATGAGTTaGGGCTCTCTAAGGTGCCCGGCTGGCTGTTGGTTGGAATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFFLASAAGSVSSMS*GSLRCPAGCWLEWF Trigger: AAACCATTCCAACCAACAGCCAGCCGGGCACCTTAGAGAGCCTCAACTCATCGAAGACACTGAACCTGCAGCGGATGCCAAGAAGAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | TGTTCTGAGTGTCGTAGTCAGTGTCAGATACCAAGGATACGCTGGTaGTCTCCTCAGATCGGTCAGTGGTTTTGCCACTGGGCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSECRSQCQIPRIRW*SPQIGQWFCHWALL Trigger: GAGGAGAGCCCAGTGGCAAAACCACTGACCGATCTGAGGAGAGCACCAGCGTATCCTTGGTATCTGACACTGACTACGACACTCAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | CACTGTTCTGAGTGTCGTAGTCAGTGTCAGATACCAAGGATACGCTaGTGCTCTCCTCAGATCGGTCAGTGGTTTTGCCACTGGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HCSECRSQCQIPRIR*CSPQIGQWFCHWAL Trigger: GAGAGCCCAGTGGCAAAACCACTGACCGATCTGAGGAGAGCACCAGCGTATCCTTGGTATCTGACACTGACTACGACACTCAGAACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 90 bp | ACTGCTTTATCAGCACCAGCAGCAGCTGCACTCCGGAAAGCAACTTaGCCTTGGGGTATTTTCAGTGCAGAGGTTGAAGCTGGTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TALSAPAAAALRKAT*PWGIFSAEVEAGVV Trigger: CACCACACCAGCTTCAACCTCTGCACTGAAAATACCCCAAGGTCAAGTTGCTTTCCGGAGTGCAGCTGCTGCTGGTGCTGATAAAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | TATCATGATCACCTCATTATTGCAGTCACTGCTGCTACCCTTCCATaGTGCTTGGGTCCCCTCCGCTTTCTCTGGCATACGCTGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: YHDHLIIAVTAATLP*CLGPLRFLWHTLCH Trigger: GTGACACAGCGTATGCCAGAGAAAGCGGAGGGGACCCAAGCACCATGGAAGGGTAGCAGCAGTGACTGCAATAATGAGGTGATCATGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGGGCACTGTCAGACATTaGGCGTGTTTCAAGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKGTVRH*ACFKLL Trigger: GAGCAACTTGAAACACGCCAAATGTCTGACAGTGCC...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | GAATCCTGGGAGTTTGCATTTGCAGTTGACCCTTGGGCAGCACTGTaGTGTGAAGAGAACATGCTGCCAGAGCATCTTGGATCCTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: ESWEFAFAVDPWAAL*CEENMLPEHLGSSL Trigger: TAGTGAGGATCCAAGATGCTCTGGCAGCATGTTCTCTTCACAGCACAGTGCTGCCCAAGGGTCAACTGCAAATGCAAACTCCCAGGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGTACATGTTCCTTTACTaGCAGCCCATCTGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKYMFLY*QPICSA Trigger: AGCAGAGCAGATGGGCTGCAAGTAAAGGAACATGTA...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATGTGAAGGGCTGCTCTaGTGTTATCTGTGGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPPCPAQISQATLLSLQECEGLL*CYLWFC Trigger: ACAGAACCACAGATAACACAAGAGCAGCCCTTCACA...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGATGATCACCTCATTATaGCAGTCACTGCTGCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKMITSL*QSLLLP Trigger: GGGTAGCAGCAGTGACTGCAATAATGAGGTGATCAT...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATGGAATCCTGGGAGTTaGCATTTGCAGTTGACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPPCPAQISQATLLSLQEWNPGS*HLQLTL Trigger: AAGGGTCAACTGCAAATGCAAACTCCCAGGATTCCA...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAACCTCTTCTAGGCAAGTaGCCATTTCCTCGTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPPCPAQISQATLLSLQEPLLGK*PFPRYL Trigger: CAGATAACGAGGAAATGGCAACTTGCCTAGAAGAGG...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | TCTCTTCCTTATGTGTTCATTTGGCTCGTTCTTCTTGGCATCCGCTaGAGGTTCAGTGTCTTCGATGAGTTGAGGCTCTCTAAGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPYVFIWLVLLGIR*RFSVFDELRLSKVP Trigger: GGGCACCTTAGAGAGCCTCAACTCATCGAAGACACTGAACCTGCAGCGGATGCCAAGAAGAACGAGCCAAATGAACACATAAGGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 90 bp | GTTGTCCTGGGAAGGAGTCACCAGTGGAACATACTTCATGAATACTaGCCGAGCCGGCTTCTTGACAAGCATTTCCTCTGTTATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVLGRSHQWNILHEY*PSRLLDKHFLCYSG Trigger: GCCTGAATAACAGAGGAAATGCTTGTCAAGAAGCCGGCTCGGGCAGTATTCATGAAGTATGTTCCACTGGTGACTCCTTCCCAGGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | TTCTGGGAAAGCATCGCTGGCACGTCTCTTCCTTATGTGTTCATTTaGCTCGTTCTTCTTGGCATCCGCTGCAGGTTCAGTGTCTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: FWESIAGTSLPYVFI*LVLLGIRCRFSVFD Trigger: ATCGAAGACACTGAACCTGCAGCGGATGCCAAGAAGAACGAGCCAAATGAACACATAAGGAAGAGACGTGCCAGCGATGCTTTCCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGCCCTGTAGGCTCCTTTaGGTTATCTCATTCTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKPCRLL*VISFLH Trigger: GTGTAAGAATGAGATAACCAAAAGGAGCCTACAGGG...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTGGCAAGACTGCCCTGTaGAATTGTGTGGCTCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGGKTAL*NCVAQM Trigger: CATCTGAGCCACACAATTCAACAGGGCAGTCTTGCC...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | AGGTTCAGTGTCTTCGATGAGTTGAGGCTCTCTAAGGTGCCCGGCTaGCTGTTGGTTGGAATGGTTTTTCTTTGTTTCTTCACTGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: RFSVFDELRLSKVPG*LLVGMVFLCFFTAT Trigger: GGTAGCAGTGAAGAAACAAAGAAAAACCATTCCAACCAACAGCCAGCCGGGCACCTTAGAGAGCCTCAACTCATCGAAGACACTGAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATCCCTGACGTTCTTTTaGTTTACCTTTAGCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPPCPAQISQATLLSLQESLTFF*FTFSCH Trigger: GTGACAGCTAAAGGTAAACAAAAAGAACGTCAGGGA...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTTTTTCAGTGCAGAGGTaGAAGCTGGTGTGGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGFSVQR*KLVWCQ Trigger: TTGGCACCACACCAGCTTCAACCTCTGCACTGAAAA...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAATTCCGGCTTTATCTaGCTCACAATTCCTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKNSGFI*LTIPTT Trigger: AGTGGTAGGAATTGTGAGCAAGATAAAGCCGGAATT...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 90 bp | AGGGCACAGGTAAGCCCACTGTGGCCGCAACTGCTTGTACGTGACTaGTTTCAAATTCTTCCTGTCCCTGACGTTCTTTTTGTTTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RAQVSPLWPQLLVRD*FQILPVPDVLFVYL Trigger: AAGGTAAACAAAAAGAACGTCAGGGACAGGAAGAATTTGAAATCAGTCACGTACAAGCAGTTGCGGCCACAGTGGGCTTACCTGTGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS TCA 90 bp | TTCCTATTGTCAGTTTTTATAGATGACCTGATGGGAGAAACTTCTTaGCAGGGCACAGGTAAGCCCACTGTGGCCGCAACTGCTTGTACG | + |
|
Preference number: 5 (lower is better) Translates to: FLLSVFIDDLMGETS*QGTGKPTVAATACT Trigger: CGTACAAGCAGTTGCGGCCACAGTGGGCTTACCTGTGCCCTGTCAAGAAGTTTCTCCCATCAGGTCATCTATAAAAACTGACAATAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191198.2 |
||
| CDS CCA 90 bp | GGAATAAAATTGGAATCCTGGGAGTTTGCATTTGCAGTTGACCCTTaGGCAGCACTGTGCTGTGAAGAGAACATGCTGCCAGAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GIKLESWEFAFAVDP*AALCCEENMLPEHL Trigger: AAGATGCTCTGGCAGCATGTTCTCTTCACAGCACAGTGCTGCCCAAGGGTCAACTGCAAATGCAAACTCCCAGGATTCCAATTTTATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTCCGGCTGGCTGTTGGTaGGAATGGTTTTTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGPAGCW*EWFFFV Trigger: AACAAAGAAAAACCATTCCAACCAACAGCCAGCCGG...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACCCTGGGAGTTTGCATTaGCAGTTGACCCTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLSLTLALEKPHIHIKYPGSLH*QLTLGQ Trigger: CTGCCCAAGGGTCAACTGCAAATGCAAACTCCCAGG...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAGCGCTCTTCAAATTTaGGCTTACAGGATTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKSALQI*AYRILI Trigger: AATGAGAATCCTGTAAGCCAAAATTTGAAGAGCGCT...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGAAGTCACAACATCTCCTTaGACTTCAAATTCATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VPPCPAQISQATLLSLQEVTTSP*TSNSCT Trigger: TGTGCATGAATTTGAAGTCAAAGGAGATGTTGTGAC...TTCTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTATTCTCTGGATCGCCTaGGACCTTGGTGATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGILWIA*DLGDFF Trigger: GAAGAAATCACCAAGGTCCAAGGCGATCCAGAGAAT...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 90 bp | TCCTGCTGCAGCTTTATCAGGTTATACTTCATGGTCGCCCGCTGCTaGGTGGTTAAAATATCACTCTGCGAGCAGTCTTCAGAAAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCCSFIRLYFMVARC*VVKISLCEQSSERF Trigger: AAACCTTTCTGAAGACTGCTCGCAGAGTGATATTTTAACCACTCAGCAGCGGGCGACCATGAAGTATAACCTGATAAAGCTGCAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | GATTTGAAGCTCAGCACAAGTAGGTGGGCTTGGATTTCTACTGATTaGTTCAAGTGGAAGAGCACACCTGATAGAAGACTTCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DLKLSTSRWAWISTD*FKWKSTPDRRLPPQ Trigger: CTGAGGAGGAAGTCTTCTATCAGGTGTGCTCTTCCACTTGAACCAATCAGTAGAAATCCAAGCCCACCTACTTGTGCTGAGCTTCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | TTTGCACGGTCATTACTTCTTTGGGGGTCAAGCCTGACACCACCATaGATATGTCTCTATCCGCTCTTTCTTCTGAAGATGTCAATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FARSLLLWGSSLTPP*ICLYPLFLLKMSIP Trigger: CGGAATTGACATCTTCAGAAGAAAGAGCGGATAGAGACATATCCATGGTGGTGTCAGGCTTGACCCCCAAAGAAGTAATGACCGTGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AAGTACCACCATGCCCAGCTCAGATCAGCCAAGCCACTCTACTGTCTCTCCAAGTCTTTGAAGTTAAAATaGCTGCTCCTGACATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KYHHAQLRSAKPLYCLSKSLKLK*LLLTCL Trigger: CAAACATGTCAGGAGCAGCAATTTTAACTTCAAAGA...CTTGGAGAGACAGTAGAGTGGCTTGGCTGATCTGAGCTGGGCATGGTGGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 90 bp | TCAAGCTCAAAAGCAGCCATTATTCTCAGCAGCTCTTCAGCAAGCTaGCTAAACCTTGTGCTTCCCTGTAGGCTCCTTTTGGTTATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSKAAIILSSSSAS*LNLVLPCRLLLVIS Trigger: TGAGATAACCAAAAGGAGCCTACAGGGAAGCACAAGGTTTAGTCAGCTTGCTGAAGAGCTGCTGAGAATAATGGCTGCTTTTGAGCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000190862.2 |
||
| CDS TCA 90 bp | TTGAAGAGCTTTTCCCGGGATTCTCTGGATCGCCTTGGACCTTGGTaGTTTCTTCCAGTCACAACATCTCCTTTGACTTCAAATTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LKSFSRDSLDRLGPW*FLPVTTSPLTSNSC Trigger: GCATGAATTTGAAGTCAAAGGAGATGTTGTGACTGGAAGAAATCACCAAGGTCCAAGGCGATCCAGAGAATCCCGGGAAAAGCTCTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | GCTACCACAACTATCGATTTGAAGCTCAGCACAAGTAGGTGGGCTTaGATTTCTACTGATTGGTTCAAGTGGAAGAGCACACCTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATTTIDLKLSTSRWA*ISTDWFKWKSTPDR Trigger: TCTATCAGGTGTGCTCTTCCACTTGAACCAATCAGTAGAAATCCAAGCCCACCTACTTGTGCTGAGCTTCAAATCGATAGTTGTGGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | GCTGCAGCTTTATCAGGTTATACTTCATGGTCGCCCGCTGCTGAGTaGTTAAAATATCACTCTGCGAGCAGTCTTCAGAAAGGTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AAALSGYTSWSPAAE*LKYHSASSLQKGLF Trigger: AAACAAACCTTTCTGAAGACTGCTCGCAGAGTGATATTTTAACCACTCAGCAGCGGGCGACCATGAAGTATAACCTGATAAAGCTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACACTTACAGGAACACTTaGCTGACAGACACCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRLSLTLALEKPHIHIKYTYRNT*LTDTRL Trigger: CAGCCTGGTGTCTGTCAGCAAAGTGTTCCTGTAAGT...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | CCTGGTGGAATCCATCATTGTACAGACATGAAATATTCATATCAGAGTCCGTGTGGGGGAGTTTCTCTTTaGAAGATGCCTAGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGGIHHCTDMKYSYQSPCGGVSL*KMPRAA Trigger: GGCTGCTCTAGGCATCTTCAAAAGAGAAACTCCCCC...ACACGGACTCTGATATGAATATTTCATGTCTGTACAATGATGGATTCCACCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTTCTGCAGAGTGCAGCTaGCCTTCATCTCCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTICNRLASCSIGGIKLSSAECS*PSSPAS Trigger: AGAAGCTGGAGATGAAGGCAAGCTGCACTCTGCAGA...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTTCTGAAATCAATTCCTaGTCACTTAGGAAAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGSEINS*SLRKAS Trigger: GGAAGCTTTCCTAAGTGACAAGGAATTGATTTCAGA...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 90 bp | CAAGCATTTCCTCTGTTATTCAGGCTAACTGTGTGCACTGTACTCTaGAGAATGTTCTCATTTCCCACCGCCATCTCAGTTGATGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: QAFPLLFRLTVCTVL*RMFSFPTAISVDDV Trigger: TACATCATCAACTGAGATGGCGGTGGGAAATGAGAACATTCTTCAGAGTACAGTGCACACAGTTAGCCTGAATAACAGAGGAAATGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS TCA 90 bp | GCAGTCTTCAGAAAGGTTTGTTTCACTCTCGTATCCGGATGCCTCTaGATCTGGGATTATACTATCCTCTTCTTGGTCATTATCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVFRKVCFTLVSGCL*IWDYTILFLVIILF Trigger: GAAGAGGATAATGACCAAGAAGAGGATAGTATAATCCCAGATTCAGAGGCATCCGGATACGAGAGTGAAACAAACCTTTCTGAAGACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | TCGTATCCGGATGCCTCTGAATCTGGGATTATACTATCCTCTTCTTaGTCATTATCCTCTTCTAGGCAAGTTGCCATTTCCTCGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SYPDASESGIILSSS*SLSSSRQVAISSLS Trigger: AGATAACGAGGAAATGGCAACTTGCCTAGAAGAGGATAATGACCAAGAAGAGGATAGTATAATCCCAGATTCAGAGGCATCCGGATACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGAATTTCCTCAGTGTCCTGCACAAACCCTATTCTGGGTGTTGTTTGGTAGCATGAAGGACATTTaGTACTTCTTGAATTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSEFPQCPAQTLFWVLFGSMKDI*YFLNLD Trigger: GTCCAAATTCAAGAAGTACAAAATGTCCTTCATGCT...ACCAAACAACACCCAGAATAGGGTTTGTGCAGGACACTGAGGAAATTCAGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACGTAAGCTCAGGTGTGTaGCTTATTCTGCTCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLSLTLALEKPHIHIKYVSSGV*LILLSK Trigger: CTTACTGAGCAGAATAAGCAACACACCTGAGCTTAC...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTAGTTTGCATTTGCAGTaGACCCTTGGGCAGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RTICNRLASCSIGGIKLSSLHLQ*TLGQHC Trigger: ACAGTGCTGCCCAAGGGTCAACTGCAAATGCAAACT...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATAACTCCGGAAAGCAACTaGACCTTGGGGTATTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSLTLALEKPHIHIKYITPESN*TLGYFQ Trigger: CTGAAAATACCCCAAGGTCAAGTTGCTTTCCGGAGT...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACTTATCCTCTACTGGTTaGGAGAAGTCTCTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RRLSLTLALEKPHIHIKYLSSTG*EKSLPL Trigger: AAGTGGAAGAGACTTCTCCAAACCAGTAGAGGATAA...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTTCACTGCTTGCTCATTaGGCTCCATTAGGTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTICNRLASCSIGGIKLSSLLAH*APLGQF Trigger: GAACTGACCTAATGGAGCCAAATGAGCAAGCAGTGA...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCTGTTGCTTATAGATTaGGCTCCTGCTGTGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTICNRLASCSIGGIKLSLLLID*APAVEA Trigger: TGCTTCCACAGCAGGAGCCAAATCTATAAGCAACAG...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTCCACCGCCATCTCAGTaGATGATGTATGTCTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RTICNRLASCSIGGIKLSPPPSQ*MMYVSQ Trigger: TTGAGAGACATACATCATCAACTGAGATGGCGGTGG...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATAGAAAGCAACTTGACCTaGGGGTATTTTCAGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSLTLALEKPHIHIKYIESNLT*GYFQCR Trigger: TCTGCACTGAAAATACCCCAAGGTCAAGTTGCTTTC...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | ATGTTCAATGTTTCTTATGCCCTCAGAAAACTCACAAGCAGCCTCTTCTGCAGAAGCATGAAGGACATTTaGTACTTCTTGAATTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: MFNVSYALRKLTSSLFCRSMKDI*YFLNLD Trigger: GTCCAAATTCAAGAAGTACAAAATGTCCTTCATGCT...TCTGCAGAAGAGGCTGCTTGTGAGTTTTCTGAGGGCATAAGAAACATTGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142086.3 |
||
| CDS-3UTR CAA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATATTCTCAATGATTCAGTaGGATGAGCGCTTTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLSLTLALEKPHIHIKYIFSMIQ*DERFSL Trigger: AAGAGAAAAGCGCTCATCCAACTGAATCATTGAGAA...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACAAATCACTTACACTGTaGCTTATAGATTTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRLSLTLALEKPHIHIKYKSLTL*LIDLAP Trigger: AGGAGCCAAATCTATAAGCAACAGTGTAAGTGATTT...GTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGGCTCTCCTTGACACTGGCACTTGAAAAACCTCACATTCACATCAAATACATATGGAATGGTTTTTCTTaGTTTCTTCACTGCTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLSLTLALEKPHIHIKYIWNGFS*FLHCYH Trigger: GTGGTAGCAGTGAAGAAACAAAGAAAAACCATTCCA...TATGTATTTGATGTGAATGTGAGGTTTTTCAAGTGCCAGTGTCAAGGAGAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS-3UTR CAA 90 bp | AGAACGATATGCAACAGATTAGCATCTTGCTCAATTGGTGGGATAAAGCTTTCTAACCTCTATCACACATaGTATCAGCAGCTAGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RTICNRLASCSIGGIKLSNLYHT*YQQLAY Trigger: GTAAGCTAGCTGCTGATACAATGTGTGATAGAGGTT...AGAAAGCTTTATCCCACCAATTGAGCAAGATGCTAATCTGTTGCATATCGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | GAAGACTTCCTCCTCAGCCTATTTTTCTTAGGTGCTTTTGAACTGTaGACGTTTAATTCTACCTCCAAATCACTTACACTGTTGCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: EDFLLSLFFLGAFEL*TFNSTSKSLTLLLI Trigger: TATAAGCAACAGTGTAAGTGATTTGGAGGTAGAATTAAACGTCCACAGTTCAAAAGCACCTAAGAAAAATAGGCTGAGGAGGAAGTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 90 bp | GTTATCTCATTCTTACACAAAGGACATTGTGAAGGCCCTTTCTTCTaGTTAAGAAGTTTCAGCATACAAAATTTGCAAAATATGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VISFLHKGHCEGPFF*LRSFSIQNLQNMWS Trigger: TGACCACATATTTTGCAAATTTTGTATGCTGAAACTTCTTAACCAGAAGAAAGGGCCTTCACAATGTCCTTTGTGTAAGAATGAGATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000142086.3 |
||
| CDS CCA 72 bp | TCCAGGGCACAAGGGTCCGCTAGGAGGGAAGGGGAGTaGCCAGAAGGCTGGTTCCCACGCTGCTCCAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRAQGSARREGE*PEGWFPRCSST Trigger: TGTGCTGGAGCAGCGTGGGAACCAGCCTTCTGGCCACTCCCCTTCCCTCCTAGCGGACCCTTGTGCCCTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | ATACGCTGGTGCTCTCCTCAGATCGGTCAGTGGTTTTaGCACTGGGCTCTCCTCCTAGGACCCGATCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: IRWCSPQIGQWF*HWALLLGPDPR Trigger: TCGGGGATCGGGTCCTAGGAGGAGAGCCCAGTGGCAAAACCACTGACCGATCTGAGGAGAGCACCAGCGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | GACGTGCCTTGCACAGCTGCCCAATATCTGGGCAGTTaGTGTCTTCTGTCCAGGCGCTTGGCTGCACGATCA | + |
|
Preference number: 6 (lower is better) Translates to: DVPCTAAQYLGS*CLLSRRLAARS Trigger: TGATCGTGCAGCCAAGCGCCTGGACAGAAGACAGCAACTGCCCAGATATTGGGCAGCTGTGCAAGGCACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | TTGGCATCCGCTGCAGGTTCAGTGTCTTCGATGAGTTaGGGCTCTCTAAGGTGCCCGGCTGGCTGTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LASAAGSVSSMS*GSLRCPAGCWL Trigger: CAACCAACAGCCAGCCGGGCACCTTAGAGAGCCTCAACTCATCGAAGACACTGAACCTGCAGCGGATGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | GCACGATCACAACTAGATGAGCACCTGTGTCATGGGTaGGCGATGGAAGCTCCTTCACCACGGAAGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARSQLDEHLCHG*AMEAPSPRKPH Trigger: GTGGGGCTTCCGTGGTGAAGGAGCTTCCATCGCTCACCCATGACACAGGTGCTCATCTAGTTGTGATCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | TCTGTCCAGGCGCTTGGCTGCACGATCACAACTAGATaGGCACCTGTGTCATGGGTGAGCGATGGAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVQALGCTITTR*APVSWVSDGSS Trigger: GGAGCTTCCATCGCTCACCCATGACACAGGTGCTCATCTAGTTGTGATCGTGCAGCCAAGCGCCTGGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | GGGGTTCCTTCTAGCTCTCGCCTTGGCAGGCAAGACTaGCCTGTTGAATTGTGTGGCTCAGATGACGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GVPSSSRLGRQD*PVELCGSDDAS Trigger: AGAGGCGTCATCTGAGCCACACAATTCAACAGGGCAGTCTTGCCTGCCAAGGCGAGAGCTAGAAGGAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | CTGGAGGAGCTCCTCCTGAGAGGGGGAGTTTCTCTTTaGAAGATGCCTAGAGCAGCCATGTGCAGAGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LEELLLRGGVSL*KMPRAAMCRAP Trigger: AGGGGCTCTGCACATGGCTGCTCTAGGCATCTTCAAAAGAGAAACTCCCCCTCTCAGGAGGAGCTCCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | CAACGGAGATTTAAAAGGGGAAGGCCTTCCCATCCCTaGCTCGTCATCTCCACTGGTGGGACCCTCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: QRRFKRGRPSHP*LVISTGGTLQM Trigger: CATCTGGAGGGTCCCACCAGTGGAGATGACGAGTCAGGGATGGGAAGGCCTTCCCCTTTTAAATCTCCGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | CTCATTATTGCAGTCACTGCTGCTACCCTTCCATGGTaGTTGGGTCCCCTCCGCTTTCTCTGGCATACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LIIAVTAATLPW*LGPLRFLWHTL Trigger: CAGCGTATGCCAGAGAAAGCGGAGGGGACCCAAGCACCATGGAAGGGTAGCAGCAGTGACTGCAATAATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | ACCCAGTCCCACATCACAAGACGTGCCTTGCACAGCTaGCCAATATCTGGGCAGTTGCTGTCTTCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TQSHITRRALHS*PISGQLLSSVQ Trigger: CTGGACAGAAGACAGCAACTGCCCAGATATTGGGCAGCTGTGCAAGGCACGTCTTGTGATGTGGGACTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | CACCTCATTATTGCAGTCACTGCTGCTACCCTTCCATaGTGCTTGGGTCCCCTCCGCTTTCTCTGGCATACG | + |
|
Preference number: 6 (lower is better) Translates to: HLIIAVTAATLP*CLGPLRFLWHT Trigger: CGTATGCCAGAGAAAGCGGAGGGGACCCAAGCACCATGGAAGGGTAGCAGCAGTGACTGCAATAATGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | TTCAGTGCAGAGGTTGAAGCTGGTGTGGTGCCAATGTaGGCTGGCTCTTTAGGGGACTCAGATTCGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSAEVEAGVVPM*AGSLGDSDSGS Trigger: AGACCCCGAATCTGAGTCCCCTAAAGAGCCAGCCCACATTGGCACCACACCAGCTTCAACCTCTGCACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | GTACCAGGTAGGCATCCAGATCCCGACACCGGTAGCTaGATAGACTGTCCAACACCCAGTCCCACATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: VPGRHPDPDTGS*IDCPTPSPTSQ Trigger: TTGTGATGTGGGACTGGGTGTTGGACAGTCTATCCAGCTACCGGTGTCGGGATCTGGATGCCTACCTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | CTGGGCTCTCCTCCTAGGACCCGATCCCCGAGTTCTTaGGCACTGTCAGACATTTGGCGTGTTTCAAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSPPRTRSPSS*ALSDIWRVSSC Trigger: GCAACTTGAAACACGCCAAATGTCTGACAGTGCCAAAGAACTCGGGGATCGGGTCCTAGGAGGAGAGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | CTTCTAGCTCTCGCCTTGGCAGGCAAGACTGCCCTGTaGAATTGTGTGGCTCAGATGACGCCTCTGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLALALAGKTAL*NCVAQMTPLIQ Trigger: CTGGATCAGAGGCGTCATCTGAGCCACACAATTCAACAGGGCAGTCTTGCCTGCCAAGGCGAGAGCTAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | CTGTCCAACACCCAGTCCCACATCACAAGACGTGCCTaGCACAGCTGCCCAATATCTGGGCAGTTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSNTQSHITRRA*HSCPISGQLLS Trigger: AGACAGCAACTGCCCAGATATTGGGCAGCTGTGCAAGGCACGTCTTGTGATGTGGGACTGGGTGTTGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 90 bp | CTGGATAGACTGTCCAACACCCAGTCCCACATCACAAGACGTGCCTaGCACAGCTGCCCAATATCTGGGCAGTTGCTGTCTTCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LDRLSNTQSHITRRA*HSCPISGQLLSSVQ Trigger: CTGGACAGAAGACAGCAACTGCCCAGATATTGGGCAGCTGTGCAAGGCACGTCTTGTGATGTGGGACTGGGTGTTGGACAGTCTATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | GGGAAGGCCTTCCCATCCCTGACTCGTCATCTCCACTaGTGGGACCCTCCAGATGTTGTAGTTGGAATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GKAFPSLTRHLH*WDPPDVVVGIC Trigger: ACAAATTCCAACTACAACATCTGGAGGGTCCCACCAGTGGAGATGACGAGTCAGGGATGGGAAGGCCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 90 bp | GTTTTGCCACTGGGCTCTCCTCCTAGGACCCGATCCCCGAGTTCTTaGGCACTGTCAGACATTTGGCGTGTTTCAAGTTGCTCTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLPLGSPPRTRSPSS*ALSDIWRVSSCSVP Trigger: AGGAACAGAGCAACTTGAAACACGCCAAATGTCTGACAGTGCCAAAGAACTCGGGGATCGGGTCCTAGGAGGAGAGCCCAGTGGCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | TCAGCACCAGCAGCAGCTGCACTCCGGAAAGCAACTTaGCCTTGGGGTATTTTCAGTGCAGAGGTTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAPAAAALRKAT*PWGIFSAEVEA Trigger: AGCTTCAACCTCTGCACTGAAAATACCCCAAGGTCAAGTTGCTTTCCGGAGTGCAGCTGCTGCTGGTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | TGTCGTAGTCAGTGTCAGATACCAAGGATACGCTGGTaGTCTCCTCAGATCGGTCAGTGGTTTTGCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRSQCQIPRIRW*SPQIGQWFCHW Trigger: CCAGTGGCAAAACCACTGACCGATCTGAGGAGAGCACCAGCGTATCCTTGGTATCTGACACTGACTACGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | TTTCCTAGACGCTCTGTGGAGACTCTGAGACTTCGATaGATGGGTTACAGGACTAGGGCTCCTACTGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: FPRRSVETLRLR*MGYRTRAPTGL Trigger: GAGTCCAGTAGGAGCCCTAGTCCTGTAACCCATGCATCGAAGTCTCAGAGTCTCCACAGAGCGTCTAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | GAGTGTCGTAGTCAGTGTCAGATACCAAGGATACGCTaGTGCTCTCCTCAGATCGGTCAGTGGTTTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ECRSQCQIPRIR*CSPQIGQWFCH Trigger: GTGGCAAAACCACTGACCGATCTGAGGAGAGCACCAGCGTATCCTTGGTATCTGACACTGACTACGACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | AGCAACTTGACCTTGGGGTATTTTCAGTGCAGAGGTTaGAGCTGGTGTGGTGCCAATGTGGGCTGGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SNLTLGYFQCRG*SWCGANVGWLF Trigger: AAAGAGCCAGCCCACATTGGCACCACACCAGCTTCAACCTCTGCACTGAAAATACCCCAAGGTCAAGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | GAGTTTGCATTTGCAGTTGACCCTTGGGCAGCACTGTaGTGTGAAGAGAACATGCTGCCAGAGCATCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EFAFAVDPWAAL*CEENMLPEHLG Trigger: TCCAAGATGCTCTGGCAGCATGTTCTCTTCACAGCACAGTGCTGCCCAAGGGTCAACTGCAAATGCAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | AGCATCGCTGGCACGTCTCTTCCTTATGTGTTCATTTaGCTCGTTCTTCTTGGCATCCGCTGCAGGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SIAGTSLPYVFI*LVLLGIRCRFS Trigger: ACTGAACCTGCAGCGGATGCCAAGAAGAACGAGCCAAATGAACACATAAGGAAGAGACGTGCCAGCGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | AAGGCCTTCCCATCCCTGACTCGTCATCTCCACTGGTaGGACCCTCCAGATGTTGTAGTTGGAATTTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: KAFPSLTRHLHW*DPPDVVVGICH Trigger: ATGACAAATTCCAACTACAACATCTGGAGGGTCCCACCAGTGGAGATGACGAGTCAGGGATGGGAAGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | AAGCATCGCTGGCACGTCTCTTCCTTATGTGTTCATTaGGCTCGTTCTTCTTGGCATCCGCTGCAGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KHRWHVSSLCVH*ARSSWHPLQVQ Trigger: CTGAACCTGCAGCGGATGCCAAGAAGAACGAGCCAAATGAACACATAAGGAAGAGACGTGCCAGCGATGCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | GACCCGATCCCCGAGTTCTTTGGCACTGTCAGACATTaGGCGTGTTTCAAGTTGCTCTGTTCCTGTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DPIPEFFGTVRH*ACFKLLCSCSL Trigger: CAGAGAACAGGAACAGAGCAACTTGAAACACGCCAAATGTCTGACAGTGCCAAAGAACTCGGGGATCGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | AAGCAACTTGACCTTGGGGTATTTTCAGTGCAGAGGTaGAAGCTGGTGTGGTGCCAATGTGGGCTGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KQLDLGVFSVQR*KLVWCQCGLAL Trigger: AAGAGCCAGCCCACATTGGCACCACACCAGCTTCAACCTCTGCACTGAAAATACCCCAAGGTCAAGTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | GACGATTCTAATTTCCTAGACGCTCTGTGGAGACTCTaGGACTTCGATGCATGGGTTACAGGACTAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DDSNFLDALWRL*DFDAWVTGLGL Trigger: GAGCCCTAGTCCTGTAACCCATGCATCGAAGTCTCAGAGTCTCCACAGAGCGTCTAGGAAATTAGAATCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | GGAAGGAGTCACCAGTGGAACATACTTCATGAATACTaGCCGAGCCGGCTTCTTGACAAGCATTTCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRSHQWNILHEY*PSRLLDKHFLC Trigger: ACAGAGGAAATGCTTGTCAAGAAGCCGGCTCGGGCAGTATTCATGAAGTATGTTCCACTGGTGACTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS GCA 72 bp | GGAGTTTCTCTTTTGAAGATGCCTAGAGCAGCCATGTaGAGAGCCCCTACTGCCTGCCAACGGAGATTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GVSLLKMPRAAM*RAPTACQRRFK Trigger: TTTAAATCTCCGTTGGCAGGCAGTAGGGGCTCTGCACATGGCTGCTCTAGGCATCTTCAAAAGAGAAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | CAATTCCGGCTTTATCTTGCTCACAATTCCTACCACTaGTTTATCAGCACCAGCAGCAGCTGCACTCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QFRLYLAHNSYH*FISTSSSCTPE Trigger: TTCCGGAGTGCAGCTGCTGCTGGTGCTGATAAAGCAGTGGTAGGAATTGTGAGCAAGATAAAGCCGGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | GGCGCTGAGTCCATTCTCCCCGCTTCTGTAATGAGATaGTGGACAAAGCCTACAACCTCTATCACACATTGT | + |
|
Preference number: 6 (lower is better) Translates to: GAESILPASVMR*WTKPTTSITHC Trigger: ACAATGTGTGATAGAGGTTGTAGGCTTTGTCCATCATCTCATTACAGAAGCGGGGAGAATGGACTCAGCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | TCAGTTTTTATAGATGACCTGATGGGAGAAACTTCTTaGCAGGGCACAGGTAAGCCCACTGTGGCCGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: SVFIDDLMGETS*QGTGKPTVAAT Trigger: AGTTGCGGCCACAGTGGGCTTACCTGTGCCCTGTCAAGAAGTTTCTCCCATCAGGTCATCTATAAAAACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191198.2 |
||
| CDS GCA 72 bp | TATGTGTTCATTTGGCTCGTTCTTCTTGGCATCCGCTaGAGGTTCAGTGTCTTCGATGAGTTGAGGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YVFIWLVLLGIR*RFSVFDELRLS Trigger: AGAGAGCCTCAACTCATCGAAGACACTGAACCTGCAGCGGATGCCAAGAAGAACGAGCCAAATGAACACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | AATTCCTACCACTGCTTTATCAGCACCAGCAGCAGCTaGACTCCGGAAAGCAACTTGACCTTGGGGTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: NSYHCFISTSSS*TPESNLTLGYF Trigger: AAAATACCCCAAGGTCAAGTTGCTTTCCGGAGTGCAGCTGCTGCTGGTGCTGATAAAGCAGTGGTAGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | GTCTTCGATGAGTTGAGGCTCTCTAAGGTGCCCGGCTaGCTGTTGGTTGGAATGGTTTTTCTTTGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VFDELRLSKVPG*LLVGMVFLCFF Trigger: GAAGAAACAAAGAAAAACCATTCCAACCAACAGCCAGCCGGGCACCTTAGAGAGCCTCAACTCATCGAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | GATGAGTTGAGGCTCTCTAAGGTGCCCGGCTGGCTGTaGGTTGGAATGGTTTTTCTTTGTTTCTTCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DELRLSKVPGWL*VGMVFLCFFTA Trigger: AGCAGTGAAGAAACAAAGAAAAACCATTCCAACCAACAGCCAGCCGGGCACCTTAGAGAGCCTCAACTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | TTCTTTGGCACTGTCAGACATTTGGCGTGTTTCAAGTaGCTCTGTTCCTGTTCTCTGAGGGCTGGGATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FFGTVRHLACFK*LCSCSLRAGID Trigger: GTCAATCCCAGCCCTCAGAGAACAGGAACAGAGCAACTTGAAACACGCCAAATGTCTGACAGTGCCAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 90 bp | AGTGTCTTCGATGAGTTGAGGCTCTCTAAGGTGCCCGGCTGGCTGTaGGTTGGAATGGTTTTTCTTTGTTTCTTCACTGCTACCACAACT | + |
|
Preference number: 6 (lower is better) Translates to: SVFDELRLSKVPGWL*VGMVFLCFFTATTT Trigger: AGTTGTGGTAGCAGTGAAGAAACAAAGAAAAACCATTCCAACCAACAGCCAGCCGGGCACCTTAGAGAGCCTCAACTCATCGAAGACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 90 bp | ATACGCTGTGTCACAGCACTGCTGCATCTGGTAAGCTCAGGTGTGTaGCTTATTCTGCTCAGTAAGTGTTGGAAGCAGGGAAGATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: IRCVTALLHLVSSGV*LILLSKCWKQGRSS Trigger: TGAAGATCTTCCCTGCTTCCAACACTTACTGAGCAGAATAAGCAACACACCTGAGCTTACCAGATGCAGCAGTGCTGTGACACAGCGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | AAAGCAGCCATTATTCTCAGCAGCTCTTCAGCAAGCTaGCTAAACCTTGTGCTTCCCTGTAGGCTCCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KAAIILSSSSAS*LNLVLPCRLLL Trigger: CAAAAGGAGCCTACAGGGAAGCACAAGGTTTAGTCAGCTTGCTGAAGAGCTGCTGAGAATAATGGCTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000190862.2 |
||
| CDS TCA 72 bp | GTAAGCCCACTGTGGCCGCAACTGCTTGTACGTGACTaGTTTCAAATTCTTCCTGTCCCTGACGTTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VSPLWPQLLVRD*FQILPVPDVLF Trigger: AAAAAGAACGTCAGGGACAGGAAGAATTTGAAATCAGTCACGTACAAGCAGTTGCGGCCACAGTGGGCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS TCA 72 bp | CAGAAGTCTTCTTTCTTGGATAGACCGGACCACCCATaGATAGCTAACTATCCACTTTCCTCCTGCAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: QKSSFLDRPDHP*IANYPLSSCNA Trigger: GGCATTGCAGGAGGAAAGTGGATAGTTAGCTATTCATGGGTGGTCCGGTCTATCCAAGAAAGAAGACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | TTTTCCCGGGATTCTCTGGATCGCCTTGGACCTTGGTaGTTTCTTCCAGTCACAACATCTCCTTTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSRDSLDRLGPW*FLPVTTSPLTS Trigger: TGAAGTCAAAGGAGATGTTGTGACTGGAAGAAATCACCAAGGTCCAAGGCGATCCAGAGAATCCCGGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | CCTCTGTTATTCAGGCTAACTGTGTGCACTGTACTCTaGAGAATGTTCTCATTTCCCACCGCCATCTCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLLFRLTVCTVL*RMFSFPTAISV Trigger: AACTGAGATGGCGGTGGGAAATGAGAACATTCTTCAGAGTACAGTGCACACAGTTAGCCTGAATAACAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS TCA 72 bp | AGCTTTATCAGGTTATACTTCATGGTCGCCCGCTGCTaGGTGGTTAAAATATCACTCTGCGAGCAGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFIRLYFMVARC*VVKISLCEQSS Trigger: TGAAGACTGCTCGCAGAGTGATATTTTAACCACTCAGCAGCGGGCGACCATGAAGTATAACCTGATAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | CTCAGCACAAGTAGGTGGGCTTGGATTTCTACTGATTaGTTCAAGTGGAAGAGCACACCTGATAGAAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: LSTSRWAWISTD*FKWKSTPDRRL Trigger: AAGTCTTCTATCAGGTGTGCTCTTCCACTTGAACCAATCAGTAGAAATCCAAGCCCACCTACTTGTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | GGAACATACTTCATGAATACTGCCCGAGCCGGCTTCTaGACAAGCATTTCCTCTGTTATTCAGGCTAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: GTYFMNTARAGF*TSISSVIQANC Trigger: ACAGTTAGCCTGAATAACAGAGGAAATGCTTGTCAAGAAGCCGGCTCGGGCAGTATTCATGAAGTATGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS CAA 72 bp | TGTTCTTTGAAGTTAAAATTGCTGCTCCTGACATGTTaGGTTCCAGATCTGGCAGGTCTTCCAGGGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSLKLKLLLLTC*VPDLAGLPGHK Trigger: CTTGTGCCCTGGAAGACCTGCCAGATCTGGAACCAAACATGTCAGGAGCAGCAATTTTAACTTCAAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 90 bp | GCTGAGTGGTTAAAATATCACTCTGCGAGCAGTCTTCAGAAAGGTTaGTTTCACTCTCGTATCCGGATGCCTCTGAATCTGGGATTATAC | + |
|
Preference number: 6 (lower is better) Translates to: AEWLKYHSASSLQKG*FHSRIRMPLNLGLY Trigger: GTATAATCCCAGATTCAGAGGCATCCGGATACGAGAGTGAAACAAACCTTTCTGAAGACTGCTCGCAGAGTGATATTTTAACCACTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | GCATCTTGGATCCTCACTAAACTGATGCTCCTGAGATaGCTCTATCATGATCACCTCATTATTGCAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ASWILTKLMLLR*LYHDHLIIAVT Trigger: AGTGACTGCAATAATGAGGTGATCATGATAGAGGCATCTCAGGAGCATCAGTTTAGTGAGGATCCAAGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | TTATCAGGTTATACTTCATGGTCGCCCGCTGCTGAGTaGTTAAAATATCACTCTGCGAGCAGTCTTCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSGYTSWSPAAE*LKYHSASSLQK Trigger: TTTCTGAAGACTGCTCGCAGAGTGATATTTTAACCACTCAGCAGCGGGCGACCATGAAGTATAACCTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | TCTGAAGAATGTTCTCATTTCCCACCGCCATCTCAGTaGATGATGTATGTCTCTCAAATCGTCCCTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SEECSHFPPPSQ*MMYVSQIVPLS Trigger: TGACAGAGGGACGATTTGAGAGACATACATCATCAACTGAGATGGCGGTGGGAAATGAGAACATTCTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS TCA 72 bp | TTGTCACTTAGGAAAGCTTCCTCATTCCCACACTGGTaGCTCCTCTGTTTGGAAGGTGGAATAAAATTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSLRKASSFPHW*LLCLEGGIKLE Trigger: TTCCAATTTTATTCCACCTTCCAAACAGAGGAGTCACCAGTGTGGGAATGAGGAAGCTTTCCTAAGTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | CACCACCATGGATATGTCTCTATCCGCTCTTTCTTCTaGAGATGTCAATTCCGGCTTTATCTTGCTCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: HHHGYVSIRSFF*RCQFRLYLAHN Trigger: ATTGTGAGCAAGATAAAGCCGGAATTGACATCTTCAGAAGAAAGAGCGGATAGAGACATATCCATGGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CCA 72 bp | GATGCCTCTGAATCTGGGATTATACTATCCTCTTCTTaGTCATTATCCTCTTCTAGGCAAGTTGCCATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DASESGIILSSS*SLSSSRQVAIS Trigger: GGAAATGGCAACTTGCCTAGAAGAGGATAATGACCAAGAAGAGGATAGTATAATCCCAGATTCAGAGGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | TTAAAATATCACTCTGCGAGCAGTCTTCAGAAAGGTTaGTTTCACTCTCGTATCCGGATGCCTCTGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LKYHSASSLQKG*FHSRIRMPLNL Trigger: CAGATTCAGAGGCATCCGGATACGAGAGTGAAACAAACCTTTCTGAAGACTGCTCGCAGAGTGATATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS TCA 72 bp | ATTTCAAGATACTTATCACTTACAGGAACACTTTGCTaGCAGACACCAGGCTGCATACTATCTAATGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISRYLSLTGTLC*QTPGCILSNGG Trigger: GCCTCCATTAGATAGTATGCAGCCTGGTGTCTGTCAGCAAAGTGTTCCTGTAAGTGATAAGTATCTTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS GCA 72 bp | GCTGTTGGTTGGAATGGTTTTTCTTTGTTTCTTCACTaGTACCACAACTATCGATTTGAAGCTCAGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: AVGWNGFSLFLH*YHNYRFEAQHK Trigger: CTTGTGCTGAGCTTCAAATCGATAGTTGTGGTAGCAGTGAAGAAACAAAGAAAAACCATTCCAACCAACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | TGTCTCTCAAATCGTCCCTCTGTCAGAGGTTTCCTATaGTCAGTTTTTATAGATGACCTGATGGGAGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: CLSNRPSVRGFL*SVFIDDLMGET Trigger: AGTTTCTCCCATCAGGTCATCTATAAAAACTGACAATAGGAAACCTCTGACAGAGGGACGATTTGAGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS CCA 72 bp | CTCCTCAGCCTATTTTTCTTAGGTGCTTTTGAACTGTaGACGTTTAATTCTACCTCCAAATCACTTACACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLSLFFLGAFEL*TFNSTSKSLTL Trigger: CAGTGTAAGTGATTTGGAGGTAGAATTAAACGTCCACAGTTCAAAAGCACCTAAGAAAAATAGGCTGAGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | ACTGATTTCAAATTCTTCCTGTCCCTGACGTTCTTTTaGTTTACCTTTAGCTGTCACCTTTGGACTCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TDFKFFLSLTFF*FTFSCHLWTQF Trigger: GAACTGAGTCCAAAGGTGACAGCTAAAGGTAAACAAAAAGAACGTCAGGGACAGGAAGAATTTGAAATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000191198.2 |
||
| CDS CAA 90 bp | GATGATGTATGTCTCTCAAATCGTCCCTCTGTCAGAGGTTTCCTATaGTCAGTTTTTATAGATGACCTGATGGGAGAAACTGATTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: DDVCLSNRPSVRGFL*SVFIDDLMGETDCL Trigger: TAAACAATCAGTTTCTCCCATCAGGTCATCTATAAAAACTGACAATAGGAAACCTCTGACAGAGGGACGATTTGAGAGACATACATCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017290.11 |
||
| CDS CAA 72 bp | CAAAATATGTGGTCACACTTTGTGGAAACAGGTTCTTaGATCAGTTCCAAACAGATCGGACACTCTAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: QNMWSHFVETGS*ISSKQIGHSKI Trigger: AATCTTAGAGTGTCCGATCTGTTTGGAACTGATCAAAGAACCTGTTTCCACAAAGTGTGACCACATATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017290.11 ENSMUST00000142086.3 |
||