Pregenerated sensors for BRAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029458Ensembl transcript IDs: ENSMUST00000031414.15, ENSMUST00000111765.8, ENSMUST00000140996.6, ENSMUST00000142701.3, ENSMUST00000195952.5
Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCCCCAGCCGCCTGTGTGGCTCGGGCCGGAGGATCTGCAGTGCTaGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCCGAGTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: QPQPPVWLGPEDLQC*PALRKSRLQRSESE Trigger: CTCAGACTCGGACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGCCCGAGCCACACAGGCGGCTGGGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | GTCTCTGATGGTCACTTGCCCCTCTTGCTGCGGCCCTTTCTGGACTaGAGCTTCCCACCGGCCCCGGAAGAGGGTGGGTTGGGCGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: VSDGHLPLLLRPFLD*SFPPAPEEGGLGAE Trigger: CTCAGCGCCCAACCCACCCTCTTCCGGGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR CCA 90 bp | CCGGAAGAGGGTGGGTTGGGCGCTGAGGCCATGGCGATGTTGATCTaGCCTTCCTGGATCTCCTGCCTCGTCTCCGCAGGCAGGTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PEEGGLGAEAMAMLI*PSWISCLVSAGRWL Trigger: CAGCCACCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAACATCGCCATGGCCTCAGCGCCCAACCCACCCTCTTCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR CCA 90 bp | GGTGGGTTGGGCGCTGAGGCCATGGCGATGTTGATCTGGCCTTCCTaGATCTCCTGCCTCGTCTCCGCAGGCAGGTGGCTGATCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GGLGAEAMAMLIWPS*ISCLVSAGRWLICC Trigger: GCAGCAGATCAGCCACCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAACATCGCCATGGCCTCAGCGCCCAACCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | TCCACTGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTaGAGCACTGCTACTCTCCTCTGGGCAGCAGGGCTGCTGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: STGHSLPRHFPQPVW*STATLLWAAGLLGG Trigger: CCCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCAGTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | GGCGCTGAGGCCATGGCGATGTTGATCTGGCCTTCCTGGATCTCCTaGCTCGTCTCCGCAGGCAGGTGGCTGATCTGCTGCTGTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GAEAMAMLIWPSWIS*LVSAGRWLICCCVS Trigger: GGAGACACAGCAGCAGATCAGCCACCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAACATCGCCATGGCCTCAGCGCC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | GGAAGTCTCAGGGACAAGTCTCTGATGGTCACTTGCCCCTCTTGCTaGGGCCCTTTCTGGACTGCAGCTTCCCACCGGCCCCGGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GSLRDKSLMVTCPSC*GPFWTAASHRPRKR Trigger: CCTCTTCCGGGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | CCAGGAAGTCTCAGGGACAAGTCTCTGATGGTCACTTGCCCCTCTTaGTGCGGCCCTTTCTGGACTGCAGCTTCCCACCGGCCCCGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PGSLRDKSLMVTCPS*CGPFWTAASHRPRK Trigger: CTTCCGGGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | CCCAGCAGACCCTGTGGTGCCCAGGAAGTCTCAGGGACAAGTCTCTaGTGGTCACTTGCCCCTCTTGCTGCGGCCCTTTCTGGACTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PSRPCGAQEVSGTSL*WSLAPLAAALSGLQ Trigger: CTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGGGCACCACAGGGTCTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | CCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTaGTACTCTCCTCTGGGCAGCAGGGCTGCTGGGTGGGTTGTGATG | + |
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Preference number: 1 (lower is better) Translates to: PQPSQAFPPTCVVKH*YSPLGSRAAGWVVM Trigger: CATCACAACCCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | ACCAGCTGGTTGGCGCGCAGACACTTGTTCAGCTCCTGCTCCTCCTaGAGCTCCGTGCTGAGCTTGGCCACTCTGGTGTTCAGCTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: TSWLARRHLFSSCSS*SSVLSLATLVFSWV Trigger: TACCCAGCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCTGCAGGAGGAGCAGGAGCTGAACAAGTGTCTGCGCGCCAACCAGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | TTCTGCAGCACCAGCTGGTTGGCGCGCAGACACTTGTTCAGCTCCTaGTCCTCCTGCAGCTCCGTGCTGAGCTTGGCCACTCTGGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: FCSTSWLARRHLFSS*SSCSSVLSLATLVF Trigger: GAACACCAGAGTGGCCAAGCTCAGCACGGAGCTGCAGGAGGAGCAGGAGCTGAACAAGTGTCTGCGCGCCAACCAGCTGGTGCTGCAGAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | CTGTGGTGCCCAGGAAGTCTCAGGGACAAGTCTCTGATGGTCACTTaGCCCTCTTGCTGCGGCCCTTTCTGGACTGCAGCTTCCCACCGG | + |
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Preference number: 1 (lower is better) Translates to: LWCPGSLRDKSLMVT*PSCCGPFWTAASHR Trigger: CCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGGGCACCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | AGGGCCCACACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGTaGCCAGGAAGTCTCAGGGACAAGTCTCTGATGGTCACTTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: RAHTSAQQRSQQTLW*PGSLRDKSLMVTCP Trigger: GGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGGGCACCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR CCA 90 bp | TGCCATTCACAGACTCGTCCATCCGCTCCAGACACACAGTGCACTTaGGCAGCTCCGTCAGGTCCATCACGGGGAGGCTGGCGCCATCTT | + |
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Preference number: 1 (lower is better) Translates to: CHSQTRPSAPDTQCT*AAPSGPSRGGWRHL Trigger: AAGATGGCGCCAGCCTCCCCGTGATGGACCTGACGGAGCTGCCCAAGTGCACTGTGTGTCTGGAGCGGATGGACGAGTCTGTGAATGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
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| 3UTR CCA 90 bp | GACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTaGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: DLQVVWKPLPVGCFH*PQPSQAFPPTCVVK Trigger: CTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | TATCGGCACACAGGACACGTGGTGTCATCCCACCGCTGCAGACACTaGCTATGGAAGCTGTGGTTGCAGAGGGTGGTGAGGATGCCATTC | + |
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Preference number: 1 (lower is better) Translates to: YRHTGHVVSSHRCRH*LWKLWLQRVVRMPF Trigger: GAATGGCATCCTCACCACCCTCTGCAACCACAGCTTCCATAGTCAGTGTCTGCAGCGGTGGGATGACACCACGTGTCCTGTGTGCCGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | AACCTGTGTGGTGAAGCACTGCTACTCTCCTCTGGGCAGCAGGGCTaGTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACTA | + |
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Preference number: 1 (lower is better) Translates to: NLCGEALLLSSGQQG*WVGCDEKGSQLWKL Trigger: TAGTTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTCACCACACAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR CCA 90 bp | CTGTGTGGTGAAGCACTGCTACTCTCCTCTGGGCAGCAGGGCTGCTaGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACTACTT | + |
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Preference number: 1 (lower is better) Translates to: LCGEALLLSSGQQGC*VGCDEKGSQLWKLL Trigger: AAGTAGTTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTCACCACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR CCA 90 bp | TCCTCCTGCAGCTCCGTGCTGAGCTTGGCCACTCTGGTGTTCAGCTaGGTACACTTCCTTTCCACAGACTGCTTCTCCTTCAGGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SSCSSVLSLATLVFS*VHFLSTDCFSFRRS Trigger: TGACCTCCTGAAGGAGAAGCAGTCTGTGGAAAGGAAGTGTACCCAGCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCTGCAGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | GTCAGCTTGTCAGAGGCCTCTCGATGGCTAGCTAGGCTTGCCCCTTaGATCCTGCTGGATGGAGGACACTCTCAGTTACCTGAGCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: VSLSEASRWLARLAP*ILLDGGHSQLPELR Trigger: TCTCAGCTCAGGTAACTGAGAGTGTCCTCCATCCAGCAGGATTCAAGGGGCAAGCCTAGCTAGCCATCGAGAGGCCTCTGACAAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | TTGGCCACTCTGGTGTTCAGCTGGGTACACTTCCTTTCCACAGACTaGTTCTCCTTCAGGAGGTCACTGAGCCTGAGCTCCAGGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: LATLVFSWVHFLSTD*FSFRRSLSLSSRLS Trigger: TGACAGCCTGGAGCTCAGGCTCAGTGACCTCCTGAAGGAGAAGCAGTCTGTGGAAAGGAAGTGTACCCAGCTGAACACCAGAGTGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | CCCTTTCCACATAGACCAGCTGGCAGACGTCATCTTCGATTGAGTTaGACTGGCGGCCATTGCACGCCATGTAGAAACTGTCTGCATCAG | + |
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Preference number: 1 (lower is better) Translates to: PFPHRPAGRRHLRLS*TGGHCTPCRNCLHQ Trigger: CTGATGCAGACAGTTTCTACATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGAAGATGACGTCTGCCAGCTGGTCTATGTGGAAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
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| 3UTR TCA 90 bp | TTCAGCCCTTTCCACATAGACCAGCTGGCAGACGTCATCTTCGATTaGGTTGAACTGGCGGCCATTGCACGCCATGTAGAAACTGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: FSPFHIDQLADVIFD*VELAAIARHVETVC Trigger: GCAGACAGTTTCTACATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGAAGATGACGTCTGCCAGCTGGTCTATGTGGAAAGGGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
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| 3UTR TCA 90 bp | GCATCTATCTTCTCTTCCTGGCAGGTGTCGCCCTCACACTCGTACTaGACGATCTTTCCATCCGTCTTGCTTGCAACCAGTCGATGGACA | + |
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Preference number: 1 (lower is better) Translates to: ASIFSSWQVSPSHSY*TIFPSVLLATSRWT Trigger: TGTCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGTGAGGGCGACACCTGCCAGGAAGAGAAGATAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | GACAAGCCTGTGCTTGGTTTACAACCTAGCCCTTTCTCTATGACATaGAAGCAGCTCTCTCTTCTACTCTGCAGGAGAAGGGAGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: DKPVLGLQPSPFSMT*KQLSLLLCRRREGG Trigger: CCCTCCCTCCCTTCTCCTGCAGAGTAGAAGAGAGAGCTGCTTGCATGTCATAGAGAAAGGGCTAGGTTGTAAACCAAGCACAGGCTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR CCA 90 bp | AGGGTTGCCACTGAAGAAGGAAATCTGGTCTGGGAGCTGTTTGGATaGAGACTCTGGGGCTGTGTTCACAGACTCACTCTGTTCTCTACT | + |
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Preference number: 1 (lower is better) Translates to: RVATEEGNLVWELFG*RLWGCVHRLTLFST Trigger: AGTAGAGAACAGAGTGAGTCTGTGAACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTCTTCAGTGGCAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
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| 3UTR TCA 90 bp | CTGAAGACAAGCCTGTGCTTGGTTTACAACCTAGCCCTTTCTCTATaGCATGCAAGCAGCTCTCTCTTCTACTCTGCAGGAGAAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LKTSLCLVYNLALSL*HASSSLFYSAGEGR Trigger: CCTCCCTTCTCCTGCAGAGTAGAAGAGAGAGCTGCTTGCATGTCATAGAGAAAGGGCTAGGTTGTAAACCAAGCACAGGCTTGTCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | GATGGACATAATTATCTCCAGCATAGTCCCAGACTCGATGGTTGGTaGGCTGCATGGCGTATGTGTGCTGGGTCTCCTCAAAGTGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: DGHNYLQHSPRLDGW*AAWRMCAGSPQSAC Trigger: ACAAGCACTTTGAGGAGACCCAGCACACATACGCCATGCAGCTCACCAACCATCGAGTCTGGGACTATGCTGGAGATAATTATGTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | GTCGCCCTCACACTCGTACTGAACGATCTTTCCATCCGTCTTGCTTaGAACCAGTCGATGGACATAATTATCTCCAGCATAGTCCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: VALTLVLNDLSIRLA*NQSMDIIISSIVPD Trigger: GTCTGGGACTATGCTGGAGATAATTATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGTGAGGGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | AGGTGTCGCCCTCACACTCGTACTGAACGATCTTTCCATCCGTCTTaGTTGCAACCAGTCGATGGACATAATTATCTCCAGCATAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: RCRPHTRTERSFHPS*LQPVDGHNYLQHSP Trigger: GGGACTATGCTGGAGATAATTATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGTGAGGGCGACACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR CCA 90 bp | ACTGAAGAAGGAAATCTGGTCTGGGAGCTGTTTGGATGGAGACTCTaGGGCTGTGTTCACAGACTCACTCTGTTCTCTACTTCTCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: TEEGNLVWELFGWRL*GCVHRLTLFSTSLC Trigger: GCACAGAGAAGTAGAGAACAGAGTGAGTCTGTGAACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTCTTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
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| 3UTR CCA 90 bp | GACTATTTCAACAGAAGGGTTGCCACTGAAGAAGGAAATCTGGTCTaGGAGCTGTTTGGATGGAGACTCTGGGGCTGTGTTCACAGACTC | + |
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Preference number: 1 (lower is better) Translates to: DYFNRRVATEEGNLV*ELFGWRLWGCVHRL Trigger: GAGTCTGTGAACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTCTTCAGTGGCAACCCTTCTGTTGAAATAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
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| 3UTR TCA 90 bp | TCATGTCATAGATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTaGATAAATACAATGGAAAACCGCACAAGCCTGGGGGCTACCCAG | + |
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Preference number: 1 (lower is better) Translates to: SCHRFTLEPNCKCAN*INTMENRTSLGATQ Trigger: CTGGGTAGCCCCCAGGCTTGTGCGGTTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAATCTATGACATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR GCA 90 bp | GTGTCCTTCTCTATGCGCACGATTTTGTTCTCCCAGTATATCCGCTaGGATTCCAGCTGGCTTGTCAACAGGTACGAGTACTCTAACTGT | + |
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Preference number: 1 (lower is better) Translates to: VSFSMRTILFSQYIR*DSSWLVNRYEYSNC Trigger: ACAGTTAGAGTACTCGTACCTGTTGACAAGCCAGCTGGAATCGCAGCGGATATACTGGGAGAACAAAATCGTGCGCATAGAGAAGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | TGTTCAATTACATCATTGAATGGGGCAACAAACTTCATAAGGTCATaGCTGGTCATGGTGGCAGGGACGGTGAGGACACACAGCATGGCA | + |
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Preference number: 1 (lower is better) Translates to: CSITSLNGATNFIRS*LVMVAGTVRTHSMA Trigger: TGCCATGCTGTGTGTCCTCACCGTCCCTGCCACCATGACCAGTCATGACCTTATGAAGTTTGTTGCCCCATTCAATGATGTAATTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
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| 3UTR CCA 90 bp | ATGCGCACGATTTTGTTCTCCCAGTATATCCGCTGCGATTCCAGCTaGCTTGTCAACAGGTACGAGTACTCTAACTGTAAGGCATCTATC | + |
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Preference number: 1 (lower is better) Translates to: MRTILFSQYIRCDSS*LVNRYEYSNCKASI Trigger: GATAGATGCCTTACAGTTAGAGTACTCGTACCTGTTGACAAGCCAGCTGGAATCGCAGCGGATATACTGGGAGAACAAAATCGTGCGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR TCA 90 bp | CTGTCTGCATCAGCCTGCGCACTGAACTTGATCAGTACCATGTACTaGTTCGGAGTAGAGTCCCTGATGATTTTCATTTGTTCAATTACA | + |
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Preference number: 1 (lower is better) Translates to: LSASACALNLISTMY*FGVESLMIFICSIT Trigger: TGTAATTGAACAAATGAAAATCATCAGGGACTCTACTCCGAATCAGTACATGGTACTGATCAAGTTCAGTGCGCAGGCTGATGCAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
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| 3UTR CCA 90 bp | TTTAGGGAGGTCATCTTATTTGTCTTGTACAGGTGCATAATGCCGTaGACTATTTCAACAGAAGGGTTGCCACTGAAGAAGGAAATCTGG | + |
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Preference number: 1 (lower is better) Translates to: FREVILFVLYRCIMP*TISTEGLPLKKEIW Trigger: CCAGATTTCCTTCTTCAGTGGCAACCCTTCTGTTGAAATAGTCCACGGCATTATGCACCTGTACAAGACAAATAAGATGACCTCCCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
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| 3UTR CAA 90 bp | CCGGCCCCGGAAGAGGGTGGGTTGGGCGCTGAGGCCATGGCGATGTaGATCTGGCCTTCCTGGATCTCCTGCCTCGTCTCCGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PAPEEGGLGAEAMAM*IWPSWISCLVSAGR Trigger: CCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAACATCGCCATGGCCTCAGCGCCCAACCCACCCTCTTCCGGGGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCTTGCTGCGGCCCTTTCTGGACTGCAGCTTCCCACCGGCCCCGGAAGAGGCTCCTGGATCTCGGTaGTCTGCAGGTCTTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLLLRPFLDCSFPPAPEEAPGSR*SAGLSG Trigger: CCCAGAAAGACCTGCAGATCACCGAGATCCAGGAGC...CTCTTCCGGGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAAAGTGGGCTCCTCTCCTaGAGGCAGCTGGGCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKSGLLS*RQLGLW Trigger: CCAGAGGCCCAGCTGCCTTCAGGAGAGGAGCCCACT...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR-3UTR TCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTCCTCTAGCTGCGACCTaGACATGCGGCCCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTPLAAT*TCGPAC Trigger: ACAGGCAGGGCCGCATGTTCAGGTCGCAGCTAGAGG...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR-3UTR CCA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCTTCTGCAGTGGGCAGTaGGCTCCTCTCCTGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: AGGSAVLACPEEEPATEVFCSGQ*APLLKA Trigger: TGCCTTCAGGAGAGGAGCCCACTGCCCACTGCAGAA...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR CAA 90 bp | CCCAGGAAGTCTCAGGGACAAGTCTCTGATGGTCACTTGCCCCTCTaGCTGCGGCCCTTTCTGGACTGCAGCTTCCCACCGGCCCCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PRKSQGQVSDGHLPL*LRPFLDCSFPPAPE Trigger: TTCCGGGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACCTCTAGCTGCGACCTaGACATGCGGCCCTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKPLAAT*TCGPAC Trigger: ACAGGCAGGGCCGCATGTTCAGGTCGCAGCTAGAGG...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTCAGCAGACCCTGTGGTaGCCAGGAAGTCTCAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTQQTLW*PGSLRD Trigger: GTCCCTGAGACTTCCTGGGCACCACAGGGTCTGCTG...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCCTCACCCTTGGGAAGTaGTGCCAACCCTTCCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPLTLGK*CQPFPL Trigger: GAGGGGGAAGGGTTGGCAGCACTTCCCAAGGGTGAG...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GCACTTGGGCAGCTCCGTCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGAGCAGGAAAGACCTTCTaGAGTGGGCAGTGGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ALGQLRQVHHGEAGAIFRAGKTF*SGQWAP Trigger: AGGAGCCCACTGCCCACTGCAGAAGGTCTTTCCTGC...TCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGACGGAGCTGCCCAAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CAA 90 bp | ATGCCATTCACAGACTCGTCCATCCGCTCCAGACACACAGTGCACTaGGGCAGCTCCGTCAGGTCCATCACGGGGAGGCTGGCGCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: MPFTDSSIRSRHTVH*GSSVRSITGRLAPS Trigger: AGATGGCGCCAGCCTCCCCGTGATGGACCTGACGGAGCTGCCCAAGTGCACTGTGTGTCTGGAGCGGATGGACGAGTCTGTGAATGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR CAA 90 bp | CCTGTGGTGCCCAGGAAGTCTCAGGGACAAGTCTCTGATGGTCACTaGCCCCTCTTGCTGCGGCCCTTTCTGGACTGCAGCTTCCCACCG | + |
|
Preference number: 2 (lower is better) Translates to: PVVPRKSQGQVSDGH*PLLLRPFLDCSFPP Trigger: CGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGGGCACCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACAAGCTCCCTCTAGCTaGGACCTGAACATGCGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKQAPSS*DLNMRP Trigger: GGGCCGCATGTTCAGGTCGCAGCTAGAGGGAGCTTG...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCGGGCAGCAGGGCTGCTaGGTGGGTTGTGATGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPGQQGC*VGCDEK Trigger: CTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAAGCAGGAAAGACCTTCTaGAGTGGGCAGTGGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKAGKTF*SGQWAP Trigger: AGGAGCCCACTGCCCACTGCAGAAGGTCTTTCCTGC...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGTCTGCAGTGCTGGCCTaGCCTGAGGAAGAGCCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HATTHPSFCKVRCARQAGSAVLA*PEEEPA Trigger: AGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGA...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCCACACAGCATGGCACTaGGCCGAACGTCTTCTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: AGGSAVLACPEEEPATEVHTAWH*AERLLL Trigger: TAAAAGAAGACGTTCGGCGCAGTGCCATGCTGTGTG...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTATCTCCTGAAGGCAGCTaGGCCTCTGGGAGGCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: LATAFPGISPNLCGEALLSPEGS*ASGRHC Trigger: ACAGTGCCTCCCAGAGGCCCAGCTGCCTTCAGGAGA...TAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACGAGGATCTGCAGTGCTaGCCTGCCCTGAGGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYEDLQC*PALRKS Trigger: GCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTC...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCAGCAGGGCTGCTGGGTaGGTTGTGATGAAAAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPSRAAG*VVMKRG Trigger: TCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCT...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACGGCACACAGGACACGTaGTGTCATCCCACCGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYGTQDT*CHPTAA Trigger: TGCAGCGGTGGGATGACACCACGTGTCCTGTGTGCC...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCCGTGCTGAGCTTGGCCACTCTGGTGTTCAGCTGGGTACACTTCCTTTCCCAGCAGACCCTGTGGTaGCCAGGAAGTCTCAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSVLSLATLVFSWVHFLSQQTLW*PGSLRD Trigger: GTCCCTGAGACTTCCTGGGCACCACAGGGTCTGCTG...GGAAAGGAAGTGTACCCAGCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTCTCACCCTTGGGAAGTaGTGCCAACCCTTCCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: CYHPPQLLQGQMCKTSRALTLGK*CQPFPL Trigger: GAGGGGGAAGGGTTGGCAGCACTTCCCAAGGGTGAG...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GCACTTGGGCAGCTCCGTCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGACACACAGCATGGCACTaGGCCGAACGTCTTCTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: ALGQLRQVHHGEAGAIFRHTAWH*AERLLL Trigger: TAAAAGAAGACGTTCGGCGCAGTGCCATGCTGTGTG...TCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGACGGAGCTGCCCAAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGATTTCAGCACTTCAGCCCGCTCCAGACACACAGTaGACTTGGGCAGCTCCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SGPSRGGWRHLQISALQPAPDTQ*TWAAPS Trigger: TGACGGAGCTGCCCAAGTGCACTGTGTGTCTGGAGC...GGGCTGAAGTGCTGAAATCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAAGAGGTGACTCACCCTTaGGAAGTGCTGCCAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKEVTHP*EVLPTL Trigger: AAGGGTTGGCAGCACTTCCCAAGGGTGAGTCACCTC...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACTAGAGGATCTGCAGTGCTaGCCTGCCCTGAGGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QQGCWVGCDEKGSQLWKLEDLQC*PALRKS Trigger: GCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTC...TAGTTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTCTAGCCCTTTCTCTATaGCATGCAAGCAGCTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTLALSL*HASSSL Trigger: GAGAGAGCTGCTTGCATGTCATAGAGAAAGGGCTAG...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | CATGGTGGCAGGGACGGTGAGGACACACAGCATGGCACTGCGCCGAACGTCTTCAACTTCATAAGGTCATaGCTGGTCATGGTGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HGGRDGEDTQHGTAPNVFNFIRS*LVMVAG Trigger: CCCTGCCACCATGACCAGTCATGACCTTATGAAGTT...GAAGACGTTCGGCGCAGTGCCATGCTGTGTGTCCTCACCGTCCCTGCCACCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAATGCATGGCGTATGTGTaGTGGGTCTCCTCAAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKCMAYV*WVSSKC Trigger: GCACTTTGAGGAGACCCAGCACACATACGCCATGCA...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTAGAATGGCCATGAGGTaGCTCACCCTTGGGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: CYHPPQLLQGQMCKTSRARMAMR*LTLGKC Trigger: GCACTTCCCAAGGGTGAGTCACCTCATGGCCATTCT...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTGAGGATGCCATTCACAGACTCGTCCATCCGCTCCAGACACACAGTGCACAGAATGGCCATGAGGTaGCTCACCCTTGGGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VVRMPFTDSSIRSRHTVHRMAMR*LTLGKC Trigger: GCACTTCCCAAGGGTGAGTCACCTCATGGCCATTCT...GTGCACTGTGTGTCTGGAGCGGATGGACGAGTCTGTGAATGGCATCCTCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACACACTCTCAGTTACCTaGGCTGAGAAGGAGCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYTLSVT*AEKEPG Trigger: TCCTGGCTCCTTCTCAGCTCAGGTAACTGAGAGTGT...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GTTGATCTGGCCTTCCTGGATCTCCTGCCTCGTCTCCGCAGGCAGGTGGCTGATGACGTCATCTTCGATTaGGTTGAACTGGCGGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: VDLAFLDLLPRLRRQVADDVIFD*VELAAI Trigger: AATGGCCGCCAGTTCAACTCAATCGAAGATGACGTC...ATCAGCCACCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACACCCACCCCAGCTTCTaGAAGGTCAGATGTGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYTHPSF*KVRCAR Trigger: TCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGT...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAACTGGGTATACTCCATTTGCCCCAAGCCAGGCTGCTGAAGACAAGCCTGTCTCCTGAAGGCAGCTaGGCCTCTGGGAGGCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: PKLGILHLPQARLLKTSLSPEGS*ASGRHC Trigger: ACAGTGCCTCCCAGAGGCCCAGCTGCCTTCAGGAGA...CAGGCTTGTCTTCAGCAGCCTGGCTTGGGGCAAATGGAGTATACCCAGTTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGATTTCAGCACTTCAGCCCTGGGAGCTGTTTGGATaGAGACTCTGGGGCTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SGPSRGGWRHLQISALQPWELFG*RLWGCV Trigger: AACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCA...GGGCTGAAGTGCTGAAATCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGATTTCAGCACTTCAGCCCAACTTCATAAGGTCATaGCTGGTCATGGTGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SGPSRGGWRHLQISALQPNFIRS*LVMVAG Trigger: CCCTGCCACCATGACCAGTCATGACCTTATGAAGTT...GGGCTGAAGTGCTGAAATCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCATCTGGGCAGCAGGGCTaGTGGGTGGGTTGTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPSGQQG*WVGCDE Trigger: TTCATCACAACCCACCCAGCAGCCCTGCTGCCCAGA...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GTTGATCTGGCCTTCCTGGATCTCCTGCCTCGTCTCCGCAGGCAGGTGGCTGATTCTTTCCATCCGTCTTaGTTGCAACCAGTCGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: VDLAFLDLLPRLRRQVADSFHPS*LQPVDG Trigger: TCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGA...ATCAGCCACCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAATTCCTTTCCACAGACTaGTTCTCCTTCAGGAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKFLSTD*FSFRRS Trigger: TGACCTCCTGAAGGAGAAGCAGTCTGTGGAAAGGAA...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTGAGGATGCCATTCACAGACTCGTCCATCCGCTCCAGACACACAGTGCACTCGATTGAGTTGAACTaGCGGCCATTGCACGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: VVRMPFTDSSIRSRHTVHSIELN*RPLHAM Trigger: CATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGA...GTGCACTGTGTGTCTGGAGCGGATGGACGAGTCTGTGAATGGCATCCTCACCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR CCA 90 bp | TGGCGCCATCTTCAGATTTCAGCACTTCAGCCCTTTCCACATAGACCAGCTGGCGGTCTGGGAGCTGTTTaGATGGAGACTCTGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WRHLQISALQPFPHRPAGGLGAV*METLGL Trigger: CAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACC...GCCAGCTGGTCTATGTGGAAAGGGCTGAAGTGCTGAAATCTGAAGATGGCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR CCA 90 bp | CATGGTGGCAGGGACGGTGAGGACACACAGCATGGCACTGCGCCGAACGTCTTCAGGTGCATAATGCCGTaGACTATTTCAACAGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HGGRDGEDTQHGTAPNVFRCIMP*TISTEG Trigger: CCCTTCTGTTGAAATAGTCCACGGCATTATGCACCT...GAAGACGTTCGGCGCAGTGCCATGCTGTGTGTCCTCACCGTCCCTGCCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR TCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTCTAGCCCTTTCTCTATaGCATGCAAGCAGCTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: CYHPPQLLQGQMCKTSRALALSL*HASSSL Trigger: GAGAGAGCTGCTTGCATGTCATAGAGAAAGGGCTAG...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAAGAAGGCTTTTCTTATTaGCAGGCACATTTCGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKEGFSY*QAHFGW Trigger: CCATCCGAAATGTGCCTGTCAATAAGAAAAGCCTTC...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCTGGCGCCATCTTCAGATTTCAGCACTTCAGCCCTTTCCACATAGACCAGCACCGCTGCAGACACTaGCTATGGAAGCTGTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: EAGAIFRFQHFSPFHIDQHRCRH*LWKLWL Trigger: CAACCACAGCTTCCATAGTCAGTGTCTGCAGCGGTG...CTGGTCTATGTGGAAAGGGCTGAAGTGCTGAAATCTGAAGATGGCGCCAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTGAGGATGCCATTCACAGACTCGTCCATCCGCTCCAGACACACAGTGCACCAGAAGGGTTGCCACTaGAGAAGGAAATCTGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VVRMPFTDSSIRSRHTVHQKGCH*RRKSGL Trigger: CAGACCAGATTTCCTTCTTCAGTGGCAACCCTTCTG...GTGCACTGTGTGTCTGGAGCGGATGGACGAGTCTGTGAATGGCATCCTCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTGAGGATGCCATTCACAGACTCGTCCATCCGCTCCAGACACACAGTGCACTTTGGATGGAGACTCTaGGGCTGTGTTCACAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: VVRMPFTDSSIRSRHTVHFGWRL*GCVHRL Trigger: GAGTCTGTGAACACAGCCCCAGAGTCTCCATCCAAA...GTGCACTGTGTGTCTGGAGCGGATGGACGAGTCTGTGAATGGCATCCTCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGCGCCATCTTCAGATTTCAGCACTTCAGCCCTTTCCACATAGACCAGCTGGCCATCTTCGATTGAGTTaGACTGGCGGCCATTGCACG | + |
|
Preference number: 2 (lower is better) Translates to: WRHLQISALQPFPHRPAGHLRLS*TGGHCT Trigger: CGTGCAATGGCCGCCAGTTCAACTCAATCGAAGATG...GCCAGCTGGTCTATGTGGAAAGGGCTGAAGTGCTGAAATCTGAAGATGGCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCTGGCGCCATCTTCAGATTTCAGCACTTCAGCCCTTTCCACATAGACCAGAGAGACAGGGGCTGCTaGAGGCTTCTTTTCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: EAGAIFRFQHFSPFHIDQRDRGC*RLLFFH Trigger: GTGGAAGAAAAGAAGCCTTCAGCAGCCCCTGTCTCT...CTGGTCTATGTGGAAAGGGCTGAAGTGCTGAAATCTGAAGATGGCGCCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACTGCAAGGTCAGATGTaGAAGACAAGCAGGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPLQGQM*KTSRAE Trigger: CTCAGCCCTGCTTGTCTTGCACATCTGACCTTGCAG...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCAATGGCGATGTTGATCTaGCCTTCCTGGATCTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPMAMLI*PSWISC Trigger: GCAGGAGATCCAGGAAGGCCAGATCAACATCGCCAT...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAATGGAGAAGCAGCCTTTaGAACGATCATAAAAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKWRSSL*NDHKRV Trigger: TACTCTTTTATGATCGTTTCAAAGGCTGCTTCTCCA...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACTCTCCAGGTAGAACATaGCATCGCGCAGCTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LISMLPPTPASARSDVQDSPGRT*HRAAAP Trigger: AGGAGCAGCTGCGCGATGTCATGTTCTACCTGGAGA...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACCGATGGTTGGTGAGCTaGATGGCGTATGTGTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LISMLPPTPASARSDVQDRWLVS*MAYVCW Trigger: CCAGCACACATACGCCATGCAGCTCACCAACCATCG...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | AACAAACTTCATAAGGTCATGACTGGTCATGGTGGCAGGGACGGTGAGGACACAGAGGTGACTCACCCTTaGGAAGTGCTGCCAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NKLHKVMTGHGGRDGEDTEVTHP*EVLPTL Trigger: AAGGGTTGGCAGCACTTCCCAAGGGTGAGTCACCTC...TGTGTCCTCACCGTCCCTGCCACCATGACCAGTCATGACCTTATGAAGTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GAATGGGGCAACAAACTTCATAAGGTCATGACTGGTCATGGTGGCAGGGACGGTGACGTCATCTTCGATTaGGTTGAACTGGCGGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: EWGNKLHKVMTGHGGRDGDVIFD*VELAAI Trigger: AATGGCCGCCAGTTCAACTCAATCGAAGATGACGTC...ACCGTCCCTGCCACCATGACCAGTCATGACCTTATGAAGTTTGTTGCCCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGCTGTTTGGAAGTCTCCTGAAGGCAGCTaGGCCTCTGGGAGGCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: EAHSPSVGHIKYCMAVWKSPEGS*ASGRHC Trigger: ACAGTGCCTCCCAGAGGCCCAGCTGCCTTCAGGAGA...CTTCCAAACAGCCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACTCTGCAGTCACAGGTaGGGTTTTAGGAAATGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPLCSHR*GFRKCY Trigger: GTAGCATTTCCTAAAACCCCACCTGTGACTGCAGAG...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTACAGTCAGTATCCACTaGCCCCAGCAACACAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: NATAHSTELDGDQQHRQRTVSIH*PQQHKS Trigger: TGACTTGTGTTGCTGGGGTCAGTGGATACTGACTGT...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGTGGAGAAGCAGCCTTTaGAACGATCATAAAAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: HATTHPSFCKVRCARQAGWRSSL*NDHKRV Trigger: TACTCTTTTATGATCGTTTCAAAGGCTGCTTCTCCA...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCTAAAGAGAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGTTCTGCAGTGGGCAGTaGGCTCCTCTCCTGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GSKERHTAPLLVILNIVWFCSGQ*APLLKA Trigger: TGCCTTCAGGAGAGGAGCCCACTGCCCACTGCAGAA...CCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR CAA 90 bp | TGTCGCCCTCACACTCGTACTGAACGATCTTTCCATCCGTCTTGCTaGCAACCAGTCGATGGACATAATTATCTCCAGCATAGTCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CRPHTRTERSFHPSC*QPVDGHNYLQHSPR Trigger: TCTGGGACTATGCTGGAGATAATTATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGTGAGGGCGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CAA 90 bp | ATGTTGTTAATCTCCTCTGCCGTGTCCTTCTCTATGCGCACGATTTaGTTCTCCCAGTATATCCGCTGCGATTCCAGCTGGCTTGTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: MLLISSAVSFSMRTI*FSQYIRCDSSWLVN Trigger: GTTGACAAGCCAGCTGGAATCGCAGCGGATATACTGGGAGAACAAAATCGTGCGCATAGAGAAGGACACGGCAGAGGAGATTAACAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACTAAAAGTCCCTAAAGTGTaGCATTTTAAACCTTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QQGCWVGCDEKGSQLWKLKVPKV*HFKPLA Trigger: AGCCAAAGGTTTAAAATGTCACACTTTAGGGACTTT...TAGTTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCAGCTGGCTTGTCAACAGGTACGAGTACTCTAACTGTAAGGCATCTATCTCACCGCTGCAGACACTaGCTATGGAAGCTGTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: IPAGLSTGTSTLTVRHLSHRCRH*LWKLWL Trigger: CAACCACAGCTTCCATAGTCAGTGTCTGCAGCGGTG...AGATAGATGCCTTACAGTTAGAGTACTCGTACCTGTTGACAAGCCAGCTGGAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | ATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTGAATAAATACAATGGAAAACAGCAGACCCTGTGGTaGCCAGGAAGTCTCAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: IYPGTQLQVRQLNKYNGKQQTLW*PGSLRD Trigger: GTCCCTGAGACTTCCTGGGCACCACAGGGTCTGCTG...TTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGCTGTTTGGAAGCTCTCTCTTCTACTCTaGAGGAGAAGGGAGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EAHSPSVGHIKYCMAVWKLSLLL*RRREGG Trigger: CCCTCCCTCCCTTCTCCTGCAGAGTAGAAGAGAGAG...CTTCCAAACAGCCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCGAGGTGACTCACCCTTaGGAAGTGCTGCCAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: TGTFRMESSEIKRAVTVFEVTHP*EVLPTL Trigger: AAGGGTTGGCAGCACTTCCCAAGGGTGAGTCACCTC...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGTATATCCGCTGCGATTCCAGCTGGCTTGTCAACAGGTACGAGTACTCTAACTTGAATCCTGCTGGATaGAGGACACTCTCAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: QYIRCDSSWLVNRYEYSNLNPAG*RTLSVT Trigger: GGTAACTGAGAGTGTCCTCCATCCAGCAGGATTCAA...GTTAGAGTACTCGTACCTGTTGACAAGCCAGCTGGAATCGCAGCGGATATACTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
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| 3UTR-3UTR CCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACCTCTGCAGTCACAGGTaGGGTTTTAGGAAATGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: LISMLPPTPASARSDVQDLCSHR*GFRKCY Trigger: GTAGCATTTCCTAAAACCCCACCTGTGACTGCAGAG...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACGCCATGTAGAAACTGTCTGCATCAGCCTGCGCACTGAACTTGATCAGGAAGGAAATCTGGTCTaGGAGCTGTTTGGATGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: IARHVETVCISLRTELDQEGNLV*ELFGWR Trigger: TCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTC...CTGATCAAGTTCAGTGCGCAGGCTGATGCAGACAGTTTCTACATGGCGTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
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| 3UTR CAA 90 bp | GTCTTGTACAGGTGCATAATGCCGTGGACTATTTCAACAGAAGGGTaGCCACTGAAGAAGGAAATCTGGTCTGGGAGCTGTTTGGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: VLYRCIMPWTISTEG*PLKKEIWSGSCLDG Trigger: TCCATCCAAACAGCTCCCAGACCAGATTTCCTTCTTCAGTGGCAACCCTTCTGTTGAAATAGTCCACGGCATTATGCACCTGTACAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCATGCAAGTGCGCCAACTaGATAAATACAATGGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPCKCAN*INTMEN Trigger: GTTTTCCATTGTATTTATTCAGTTGGCGCACTTGCA...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
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| 3UTR-3UTR TCA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTGAAGGCTTTTCTTATTaGCAGGCACATTTCGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: NATAHSTELDGDQQHRQREGFSY*QAHFGW Trigger: CCATCCGAAATGTGCCTGTCAATAAGAAAAGCCTTC...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACGAAGGCTTTTCTTATTaGCAGGCACATTTCGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: LISMLPPTPASARSDVQDEGFSY*QAHFGW Trigger: CCATCCGAAATGTGCCTGTCAATAAGAAAAGCCTTC...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACCTCTCTCTTCTACTCTaGAGGAGAAGGGAGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LIDRHISDGVIRNKESCHLSLLL*RRREGG Trigger: CCCTCCCTCCCTTCTCCTGCAGAGTAGAAGAGAGAG...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACAGCAGGGCTGCTGGGTaGGTTGTGATGAAAAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LIDRHISDGVIRNKESCHSRAAG*VVMKRG Trigger: TCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCT...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTTCGATTGAGTTGAACTaGCGGCCATTGCACGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: DRHISDGVIRNKESCHCLSIELN*RPLHAM Trigger: CATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGA...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACAGACTCGATGGTTGGTaGGCTGCATGGCGTATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LIDRHISDGVIRNKESCHRLDGW*AAWRMC Trigger: ACACATACGCCATGCAGCTCACCAACCATCGAGTCT...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGGCTTCTCCTCCTCCTTaGGCTGGTTCTGCAGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: SVQLICYKLPDVPGSKERASPPP*AGSAAP Trigger: TGGTGCTGCAGAACCAGCTCAAGGAGGAGGAGAAGC...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGTCTGGGCAGCAGGGCTaGTGGGTGGGTTGTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: SVQLICYKLPDVPGSKERSGQQG*WVGCDE Trigger: TTCATCACAACCCACCCAGCAGCCCTGCTGCCCAGA...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCAGCTGGCTTGTCAACAGGTACGAGTACTCTAACTGTAAGGCATCTATCTATGGCGTATGTGTGCTaGGTCTCCTCAAAGTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IPAGLSTGTSTLTVRHLSMAYVC*VSSKCL Trigger: CAAGCACTTTGAGGAGACCCAGCACACATACGCCAT...AGATAGATGCCTTACAGTTAGAGTACTCGTACCTGTTGACAAGCCAGCTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CAA 90 bp | TTACCTGATGTTCCTGGCTCTAAAGAGAGGCACACAGCCCCTCTGTaGGTCATATTAAATATTGTATGGCTGTTTGGAAGAGGCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LPDVPGSKERHTAPL*VILNIVWLFGRGSA Trigger: AGCAGAGCCTCTTCCAAACAGCCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCCAGGAACATCAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCGTCATAGATTTACCCTaGAACCCAACTGCAAGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: TGTFRMESSEIKRAVTVFVIDLP*NPTASA Trigger: CGCACTTGCAGTTGGGTTCCAGGGTAAATCTATGAC...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTGTCATAGATTTACCCTaGAACCCAACTGCAAGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: DRHISDGVIRNKESCHCLVIDLP*NPTASA Trigger: CGCACTTGCAGTTGGGTTCCAGGGTAAATCTATGAC...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGAGCAGGGCTGCTGGGTaGGTTGTGATGAAAAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVQLICYKLPDVPGSKERSRAAG*VVMKRG Trigger: TCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCT...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTTGAATCCTGCTGGATaGAGGACACTCTCAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: LIDRHISDGVIRNKESCHLNPAG*RTLSVT Trigger: GGTAACTGAGAGTGTCCTCCATCCAGCAGGATTCAA...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTTTTGTTTTCTTCCACTaGCTCTGGCGTTTGACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: DRHISDGVIRNKESCHCLFVFFH*LWRLTV Trigger: TACTGTCAAACGCCAGAGCCAGTGGAAGAAAACAAA...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR TCA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTTGCAAGTGCGCCAACTaGATAAATACAATGGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DRHISDGVIRNKESCHCLCKCAN*INTMEN Trigger: GTTTTCCATTGTATTTATTCAGTTGGCGCACTTGCA...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGCGCCCACAGCCTATGTaGCCGCATATTAAACAAATC | + |
|
Preference number: 2 (lower is better) Translates to: SVQLICYKLPDVPGSKERRPQPM*PHIKQI Trigger: GATTTGTTTAATATGCGGCCACATAGGCTGTGGGCG...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CAA 90 bp | CAGTACCATGTACTGATTCGGAGTAGAGTCCCTGATGATTTTCATTaGTTCAATTACATCATTGAATGGGGCAACAAACTTCATAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: QYHVLIRSRVPDDFH*FNYIIEWGNKLHKV Trigger: GACCTTATGAAGTTTGTTGCCCCATTCAATGATGTAATTGAACAAATGAAAATCATCAGGGACTCTACTCCGAATCAGTACATGGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR GCA 90 bp | TTGTTCAATTACATCATTGAATGGGGCAACAAACTTCATAAGGTCATGACTGGTTTTGTCTTGTACAGGTaGATAATGCCGTGGACTATT | + |
|
Preference number: 2 (lower is better) Translates to: LFNYIIEWGNKLHKVMTGFVLYR*IMPWTI Trigger: AATAGTCCACGGCATTATGCACCTGTACAAGACAAA...ACCAGTCATGACCTTATGAAGTTTGTTGCCCCATTCAATGATGTAATTGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR TCA 90 bp | CATTTGTTCAATTACATCATTGAATGGGGCAACAAACTTCATAAGGTCATGACTGTTCAATTACATCATTaGATGGGGCAACAAACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HLFNYIIEWGNKLHKVMTVQLHH*MGQQTS Trigger: TGAAGTTTGTTGCCCCATTCAATGATGTAATTGAAC...AGTCATGACCTTATGAAGTTTGTTGCCCCATTCAATGATGTAATTGAACAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR GCA 72 bp | CAGCCGCCTGTGTGGCTCGGGCCGGAGGATCTGCAGTaGTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QPPVWLGPEDLQ*WPALRKSRLQR Trigger: CCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGCCCGAGCCACACAGGCGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | GGTCACTTGCCCCTCTTGCTGCGGCCCTTTCTGGACTaGAGCTTCCCACCGGCCCCGGAAGAGGGTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GHLPLLLRPFLD*SFPPAPEEGGL Trigger: CAACCCACCCTCTTCCGGGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | GGCGCTGAGGCCATGGCGATGTTGATCTGGCCTTCCTaGATCTCCTGCCTCGTCTCCGCAGGCAGGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GAEAMAMLIWPS*ISCLVSAGRWL Trigger: CAGCCACCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAACATCGCCATGGCCTCAGCGCC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | GGTGGGTTGGGCGCTGAGGCCATGGCGATGTTGATCTaGCCTTCCTGGATCTCCTGCCTCGTCTCCGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GGLGAEAMAMLI*PSWISCLVSAG Trigger: GCCTGCGGAGACGAGGCAGGAGATCCAGGAAGGCCAGATCAACATCGCCATGGCCTCAGCGCCCAACCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | GGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTaGCTCACCCTTGGGAAGTGCTGCCAACCCTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GATQLEGRMAMR*LTLGKCCQPFP Trigger: GGGGAAGGGTTGGCAGCACTTCCCAAGGGTGAGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | GCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATaGGGTGACTCACCCTTGGGAAGTGCTGCCAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: AWGLPSWKAEWP*GDSPLGSAANP Trigger: AGGGTTGGCAGCACTTCCCAAGGGTGAGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | TCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTaGTACTCTCCTCTGGGCAGCAGGGCTGCTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQAFPPTCVVKH*YSPLGSRAAGW Trigger: CCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | AGGGACAAGTCTCTGATGGTCACTTGCCCCTCTTGCTaGGGCCCTTTCTGGACTGCAGCTTCCCACCGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RDKSLMVTCPSC*GPFWTAASHRP Trigger: GGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTGAGGCCATGGCGATGTaGATCTGGCCTTCCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTEAMAM*IWPSWI Trigger: GATCCAGGAAGGCCAGATCAACATCGCCATGGCCTC...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | CACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTaGAGCACTGCTACTCTCCTCTGGGCAGCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HSLPRHFPQPVW*STATLLWAAGL Trigger: CAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | GGTGAAGCACTGCTACTCTCCTCTGGGCAGCAGGGCTaGTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GEALLLSSGQQG*WVGCDEKGSQL Trigger: GAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | CTCAGGGACAAGTCTCTGATGGTCACTTGCCCCTCTTaGTGCGGCCCTTTCTGGACTGCAGCTTCCCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: LRDKSLMVTCPS*CGPFWTAASHR Trigger: CCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | CTGCAGTGGGCAGTGGGCTCCTCTCCTGAAGGCAGCTaGGCCTCTGGGAGGCACTGTGCTTTAGTGCTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQWAVGSSPEGS*ASGRHCALVLV Trigger: AACTAGCACTAAAGCACAGTGCCTCCCAGAGGCCCAGCTGCCTTCAGGAGAGGAGCCCACTGCCCACTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | GAAGCACTGCTACTCTCCTCTGGGCAGCAGGGCTGCTaGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EALLLSSGQQGC*VGCDEKGSQLW Trigger: CCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | CACTTGGGCAGCTCCGTCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGATCTATGGAAGCTGTGGTaGCAGAGGGTGGTGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: HLGSSVRSITGRLAPSSDLWKLW*QRVVRM Trigger: CATCCTCACCACCCTCTGCAACCACAGCTTCCATAG...ATCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGACGGAGCTGCCCAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR TCA 72 bp | CCCTGTGGTGCCCAGGAAGTCTCAGGGACAAGTCTCTaGTGGTCACTTGCCCCTCTTGCTGCGGCCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PCGAQEVSGTSL*WSLAPLAAALS Trigger: AGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGGGCACCACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | CATTCACAGACTCGTCCATCCGCTCCAGACACACAGTaGACTTGGGCAGCTCCGTCAGGTCCATCACGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSQTRPSAPDTQ*TWAAPSGPSRG Trigger: TCCCCGTGATGGACCTGACGGAGCTGCCCAAGTGCACTGTGTGTCTGGAGCGGATGGACGAGTCTGTGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR CCA 72 bp | CACTGCTACTCTCCTCTGGGCAGCAGGGCTGCTGGGTaGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HCYSPLGSRAAG*VVMKRGASSGN Trigger: GTTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCCAGAGGAGAGTAGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTATCTTTCCATCCGTCTaGCTTGCAACCAGTCGATGG | + |
|
Preference number: 3 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTIFPSV*LATSRW Trigger: CCATCGACTGGTTGCAAGCAAGACGGATGGAAAGAT...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | GACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTaGTTCCACTGGCCACAGCCTTCCCAGGCATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DLQVVWKPLPVG*FHWPQPSQAFP Trigger: GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | ATGACATCGCGCAGCTGCTCCTGGATCTCGGTGATCTaGAGGTCTTTCTGGGCACAGGTCTCCTTCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: MTSRSCSWISVI*RSFWAQVSFSS Trigger: GCTGCTGAAGGAGACCTGTGCCCAGAAAGACCTGCAGATCACCGAGATCCAGGAGCAGCTGCGCGATGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | CCAGGAAGTCTCAGGGACAAGTCTCTGATGGTCACTTaGCCCTCTTGCTGCGGCCCTTTCTGGACTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGSLRDKSLMVT*PSCCGPFWTAA Trigger: AGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | ACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGTaGCCAGGAAGTCTCAGGGACAAGTCTCTGATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TSAQQRSQQTLW*PGSLRDKSLMV Trigger: GACCATCAGAGACTTGTCCCTGAGACTTCCTGGGCACCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | CGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RIVVSHHVVAGI*TPDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| 3UTR CCA 72 bp | GCTGGAAGGCAGAATGGCCATGAGGTGACTCACCCTTaGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: AGRQNGHEVTHP*EVLPTLPPLLV Trigger: GACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGGGTGAGTCACCTCATGGCCATTCTGCCTTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | GCTCTGGCGTTTGACAGTATCGGCACACAGGACACGTaGTGTCATCCCACCGCTGCAGACACTGACTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: ALAFDSIGTQDT*CHPTAADTDYG Trigger: TCCATAGTCAGTGTCTGCAGCGGTGGGATGACACCACGTGTCCTGTGTGCCGATACTGTCAAACGCCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGATTTCAGCACTTCAGCCCTCATCTTCGATTGAGTaGAACTGGCGGCCATTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGPSRGGWRHLQISALQPSSSIE*NWRPLH Trigger: GTGCAATGGCCGCCAGTTCAACTCAATCGAAGATGA...GGGCTGAAGTGCTGAAATCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR TCA 72 bp | TCAGAGGCCTCTCGATGGCTAGCTAGGCTTGCCCCTTaGATCCTGCTGGATGGAGGACACTCTCAGTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: SEASRWLARLAP*ILLDGGHSQLP Trigger: AGGTAACTGAGAGTGTCCTCCATCCAGCAGGATTCAAGGGGCAAGCCTAGCTAGCCATCGAGAGGCCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | CTGGTGTTCAGCTGGGTACACTTCCTTTCCACAGACTaGTTCTCCTTCAGGAGGTCACTGAGCCTGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVFSWVHFLSTD*FSFRRSLSLSS Trigger: GGAGCTCAGGCTCAGTGACCTCCTGAAGGAGAAGCAGTCTGTGGAAAGGAAGTGTACCCAGCTGAACACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | AGCTCCGTGCTGAGCTTGGCCACTCTGGTGTTCAGCTaGGTACACTTCCTTTCCACAGACTGCTTCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSVLSLATLVFS*VHFLSTDCFSF Trigger: GAAGGAGAAGCAGTCTGTGGAAAGGAAGTGTACCCAGCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCCCACACTCAAAACATTaGTTTTCTTCCACTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPPHSKH*FSSTGS Trigger: AGAGCCAGTGGAAGAAAACAAATGTTTTGAGTGTGG...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTTTCCATCCGTCTTGCTaGCAACCAGTCGATGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: CYHPPQLLQGQMCKTSRAFHPSC*QPVDGH Trigger: ATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAA...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACATATTGTATGGCTGTTaGGAAGAGGCTCTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYILYGC*EEALLK Trigger: CTTCAGCAGAGCCTCTTCCAAACAGCCATACAATAT...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | TTCTCTTCCTGGCAGGTGTCGCCCTCACACTCGTACTaGACGATCTTTCCATCCGTCTTGCTTGCAACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FSSWQVSPSHSY*TIFPSVLLATS Trigger: ACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGTGAGGGCGACACCTGCCAGGAAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | GAACTGGCGGCCATTGCACGCCATGTAGAAACTGTCTaGATCAGCCTGCGCACTGAACTTGATCAGTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ELAAIARHVETV*ISLRTELDQYH Trigger: ATGGTACTGATCAAGTTCAGTGCGCAGGCTGATGCAGACAGTTTCTACATGGCGTGCAATGGCCGCCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACACACAGCCCCTCTGTaGGTCATATTAAATATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKHTAPL*VILNIV Trigger: TACAATATTTAATATGACCAACAGAGGGGCTGTGTG...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGGCAGGGACGGTGAGGACACACAGCATGGCACTGCGCCGAACGTCTTCTGTTCAATTACATCATaGAATGGGGCAACAAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: HGGRDGEDTQHGTAPNVFCSITS*NGATNF Trigger: GAAGTTTGTTGCCCCATTCAATGATGTAATTGAACA...GAAGACGTTCGGCGCAGTGCCATGCTGTGTGTCCTCACCGTCCCTGCCACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR-3UTR CAA 90 bp | GCATGGCACTGCGCCGAACGTCTTCTTTTAGGGAGGTCATCTTATTTGTCTTGTTGGTCTGGGAGCTGTTaGGATGGAGACTCTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AWHCAERLLLGRSSYLSCWSGSC*DGDSGA Trigger: AGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCA...ACAAGACAAATAAGATGACCTCCCTAAAAGAAGACGTTCGGCGCAGTGCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTCCATCACGGGGAGGCTGGCGCCATCTTCAGATTTCAGCACTTCAGCCCATTTCAACAGAAGGGTaGCCACTGAAGAAGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SGPSRGGWRHLQISALQPISTEG*PLKKEI Trigger: GATTTCCTTCTTCAGTGGCAACCCTTCTGTTGAAAT...GGGCTGAAGTGCTGAAATCTGAAGATGGCGCCAGCCTCCCCGTGATGGACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR TCA 72 bp | CATAGACCAGCTGGCAGACGTCATCTTCGATTGAGTTaGACTGGCGGCCATTGCACGCCATGTAGAAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: HRPAGRRHLRLS*TGGHCTPCRNC Trigger: ACAGTTTCTACATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGAAGATGACGTCTGCCAGCTGGTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR TCA 72 bp | TTCCACATAGACCAGCTGGCAGACGTCATCTTCGATTaGGTTGAACTGGCGGCCATTGCACGCCATGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FHIDQLADVIFD*VELAAIARHVE Trigger: TTCTACATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGAAGATGACGTCTGCCAGCTGGTCTATGTGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| 3UTR GCA 72 bp | GATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DFVTDSCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| 3UTR CCA 72 bp | ACTGAAGAAGGAAATCTGGTCTGGGAGCTGTTTGGATaGAGACTCTGGGGCTGTGTTCACAGACTCACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TEEGNLVWELFG*RLWGCVHRLTL Trigger: CAGAGTGAGTCTGTGAACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTCTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR GCA 72 bp | TCTATGCGCACGATTTTGTTCTCCCAGTATATCCGCTaGGATTCCAGCTGGCTTGTCAACAGGTACGAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SMRTILFSQYIR*DSSWLVNRYEY Trigger: GTACTCGTACCTGTTGACAAGCCAGCTGGAATCGCAGCGGATATACTGGGAGAACAAAATCGTGCGCATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | AGATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTaGATAAATACAATGGAAAACCGCACAAGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RFTLEPNCKCAN*INTMENRTSLG Trigger: CCCCAGGCTTGTGCGGTTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | AGCCTGTGCTTGGTTTACAACCTAGCCCTTTCTCTATaGCATGCAAGCAGCTCTCTCTTCTACTCTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLCLVYNLALSL*HASSSLFYSAG Trigger: TCCTGCAGAGTAGAAGAGAGAGCTGCTTGCATGTCATAGAGAAAGGGCTAGGTTGTAAACCAAGCACAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR-3UTR CAA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTATATTGTATGGCTGTTaGGAAGAGGCTCTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NATAHSTELDGDQQHRQRILYGC*EEALLK Trigger: CTTCAGCAGAGCCTCTTCCAAACAGCCATACAATAT...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | CCTCACACTCGTACTGAACGATCTTTCCATCCGTCTTaGTTGCAACCAGTCGATGGACATAATTATCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PHTRTERSFHPS*LQPVDGHNYLQ Trigger: CTGGAGATAATTATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | GGCTCTGCTGAAGCCAGTTTCTGGAGAAGCAGCCTTTaGAACGATCATAAAAGAGTAACTGAAATCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSAEASFWRSSL*NDHKRVTEICP Trigger: TGGGCAGATTTCAGTTACTCTTTTATGATCGTTTCAAAGGCTGCTTCTCCAGAAACTGGCTTCAGCAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | ATTTTGTTCTCCCAGTATATCCGCTGCGATTCCAGCTaGCTTGTCAACAGGTACGAGTACTCTAACTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ILFSQYIRCDSS*LVNRYEYSNCK Trigger: CTTACAGTTAGAGTACTCGTACCTGTTGACAAGCCAGCTGGAATCGCAGCGGATATACTGGGAGAACAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR GCA 72 bp | ACACTCGTACTGAACGATCTTTCCATCCGTCTTGCTTaGAACCAGTCGATGGACATAATTATCTCCAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: TLVLNDLSIRLA*NQSMDIIISSI Trigger: TATGCTGGAGATAATTATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR TCA 72 bp | ATTAAATATTGTATGGCTGTTTGGAAGAGGCTCTGCTaGAGCCAGTTTCTGGAGAAGCAGCCTTTGAAACGA | + |
|
Preference number: 3 (lower is better) Translates to: IKYCMAVWKRLC*SQFLEKQPLKR Trigger: TCGTTTCAAAGGCTGCTTCTCCAGAAACTGGCTTCAGCAGAGCCTCTTCCAAACAGCCATACAATATTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| 3UTR CCA 72 bp | GTCATCTTATTTGTCTTGTACAGGTGCATAATGCCGTaGACTATTTCAACAGAAGGGTTGCCACTGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VILFVLYRCIMP*TISTEGLPLKK Trigger: CTTCTTCAGTGGCAACCCTTCTGTTGAAATAGTCCACGGCATTATGCACCTGTACAAGACAAATAAGATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTTGTTCAATTACATCATaGAATGGGGCAACAAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: DRHISDGVIRNKESCHCLCSITS*NGATNF Trigger: GAAGTTTGTTGCCCCATTCAATGATGTAATTGAACA...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR TCA 90 bp | CCCCTCTTGCTGCGGCCCTTTCTGGACTGCAGCTTCCCACCGGCCCCGGAAGAGGTGGGGACCGGCGAGTaGCCCGCGAGCTCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLRPFLDCSFPPAPEEVGTGE*PASSSR Trigger: CCGACTGGAGCTCGCGGGTCACTCGCCGGTCCCCAC...CTCTTCCGGGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR TCA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCGTGGGGACCGGCGAGTaGCCCGCGAGCTCCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGSAVLACPEEEPATEVVGTGE*PASSSR Trigger: CCGACTGGAGCTCGCGGGTCACTCGCCGGTCCCCAC...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000140996.6 |
||
| CDS-3UTR GCA 90 bp | GTCACTTGCCCCTCTTGCTGCGGCCCTTTCTGGACTGCAGCTTCCCACCGGCCCTCCCGACGGCCAAGGTaGTGGTGGATGATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTCPSCCGPFWTAASHRPSRRPR*WWMMAA Trigger: AGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGA...GGGCCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR CCA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCTCGCGCAGCTGCTCCTaGATCTCGGTGATCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGSAVLACPEEEPATEVSRSCS*ISVICR Trigger: CCTGCAGATCACCGAGATCCAGGAGCAGCTGCGCGA...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCCCTTCCTGGATCTCCTaGCTCGTCTCCGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPPSWIS*LVSAGR Trigger: CCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGG...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCCGGCCAAGGTGCTGGTaGATGATGGCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGSAVLACPEEEPATEVRPRCW*MMAAFS Trigger: GGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCG...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| CDS-3UTR CCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTTGCTGCGGCCCTTTCTaGACTGCAGCTTCCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTCCGPF*TAASHR Trigger: CCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCA...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTCAAGGTGCTGGTGGATaGTGGCTGCTTTCTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTQGAGG*WLLSPR Trigger: CCGGGGAGAAAGCAGCCATCATCCACCAGCACCTTG...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| CDS-3UTR TCA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCTCTCCAGGTAGAACATaGCATCGCGCAGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGSAVLACPEEEPATEVSPGRT*HRAAAP Trigger: AGGAGCAGCTGCGCGATGTCATGTTCTACCTGGAGA...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTCGAGCTCCAGTCGGATaGCCACCAGTGACACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTRAPVG*PPVTHS Trigger: TGAGTGTGTCACTGGTGGTCATCCGACTGGAGCTCG...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000140996.6 |
||
| CDS-3UTR TCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTTCTCCAGGTAGAACATaGCATCGCGCAGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTSPGRT*HRAAAP Trigger: AGGAGCAGCTGCGCGATGTCATGTTCTACCTGGAGA...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| 3UTR CAA 72 bp | TCTCAGGGACAAGTCTCTGATGGTCACTTGCCCCTCTaGCTGCGGCCCTTTCTGGACTGCAGCTTCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SQGQVSDGHLPL*LRPFLDCSFPP Trigger: CGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CAA 72 bp | CCCAGGAAGTCTCAGGGACAAGTCTCTGATGGTCACTaGCCCCTCTTGCTGCGGCCCTTTCTGGACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRKSQGQVSDGH*PLLLRPFLDCS Trigger: GCTGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGTGACCATCAGAGACTTGTCCCTGAGACTTCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR GCA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCTTCCTTTCCACAGACTaGTTCTCCTTCAGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGGSAVLACPEEEPATEVFLSTD*FSFRRS Trigger: TGACCTCCTGAAGGAGAAGCAGTCTGTGGAAAGGAA...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTAGCTCCTGCTCCTCCTaGAGCTCCGTGCTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CYHPPQLLQGQMCKTSRASSCSS*SSVLSL Trigger: CAAGCTCAGCACGGAGCTGCAGGAGGAGCAGGAGCT...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTTGGGAGCTGTTTGGATaGAGACTCTGGGGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTWELFG*RLWGCV Trigger: AACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCA...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GTACTTATTAGGGCCCACACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGGTCTCCGCAGGCAGGTaGCTGATCTGCTGCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLIRAHTSAQQRSQQTLWVSAGR*LICCCV Trigger: GACACAGCAGCAGATCAGCCACCTGCCTGCGGAGAC...CCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCTAATAAGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCCGTGCTGAGCTTGGCCACTCTGGTGTTCAGCTGGGTACACTTCCTTTCCCGAGCTCCAGTCGGATaGCCACCAGTGACACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVLSLATLVFSWVHFLSRAPVG*PPVTHS Trigger: TGAGTGTGTCACTGGTGGTCATCCGACTGGAGCTCG...GGAAAGGAAGTGTACCCAGCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR TCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTCAGAAGGGTTGCCACTaGAGAAGGAAATCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTQKGCH*RRKSGL Trigger: CAGACCAGATTTCCTTCTTCAGTGGCAACCCTTCTG...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACCACCGCTGCAGACACTaGCTATGGAAGCTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYHRCRH*LWKLWL Trigger: CAACCACAGCTTCCATAGTCAGTGTCTGCAGCGGTG...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGGCTTCTCCTCCTCCTTaGGCTGGTTCTGCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HATTHPSFCKVRCARQAGASPPP*AGSAAP Trigger: TGGTGCTGCAGAACCAGCTCAAGGAGGAGGAGAAGC...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTGCTCCTGGATCTCGGTaGTCTGCAGGTCTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CYHPPQLLQGQMCKTSRAAPGSR*SAGLSG Trigger: CCCAGAAAGACCTGCAGATCACCGAGATCCAGGAGC...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTCTCCTCACACTACACTCCTTCCTGGATCTCCTaGCTCGTCTCCGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWEVLPTLPPLLVSSHYTPSWIS*LVSAGR Trigger: CCTGCCTGCGGAGACGAGGCAGGAGATCCAGGAAGG...AGTGTAGTGTGAGGAGACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | GTACTTATTAGGGCCCACACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGACTTGCCCCTCTTGCTaGGGCCCTTTCTGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLIRAHTSAQQRSQQTLWTCPSC*GPFWTA Trigger: TGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGT...CCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCTAATAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GTACTTATTAGGGCCCACACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGCGGCCAAGGTGCTGGTaGATGATGGCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLIRAHTSAQQRSQQTLWRPRCW*MMAAFS Trigger: GGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCG...CCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCTAATAAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| CDS-3UTR CCA 90 bp | AGCTCCGTGCTGAGCTTGGCCACTCTGGTGTTCAGCTGGGTACACTTCCTTTCCCGGCCAAGGTGCTGGTaGATGATGGCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVLSLATLVFSWVHFLSRPRCW*MMAAFS Trigger: GGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCG...GGAAAGGAAGTGTACCCAGCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR CCA 90 bp | GTACTTATTAGGGCCCACACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGGGTCTGGGAGCTGTTTaGATGGAGACTCTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLIRAHTSAQQRSQQTLWGLGAV*METLGL Trigger: CAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACC...CCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCTAATAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTCTCCTCACACTACACTTGCTGCGGCCCTTTCTaGACTGCAGCTTCCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PWEVLPTLPPLLVSSHYTCCGPF*TAASHR Trigger: CCGGTGGGAAGCTGCAGTCCAGAAAGGGCCGCAGCA...AGTGTAGTGTGAGGAGACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACAGAGACAGGGGCTGCTaGAGGCTTCTTTTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYRDRGC*RLLFFH Trigger: GTGGAAGAAAAGAAGCCTTCAGCAGCCCCTGTCTCT...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACATCTTCGATTGAGTTaGACTGGCGGCCATTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LATAFPGISPNLCGEALLHLRLS*TGGHCT Trigger: CGTGCAATGGCCGCCAGTTCAACTCAATCGAAGATG...TAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTAAGACTCGATGGTTGGTaGGCTGCATGGCGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LATAFPGISPNLCGEALLRLDGW*AAWRMC Trigger: ACACATACGCCATGCAGCTCACCAACCATCGAGTCT...TAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTTCTTTCCATCCGTCTTaGTTGCAACCAGTCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTSFHPS*LQPVDG Trigger: TCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGA...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCAAGCTCCTGCTCCTCCTaGAGCTCCGTGCTGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPSSCSS*SSVLSL Trigger: CAAGCTCAGCACGGAGCTGCAGGAGGAGCAGGAGCT...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | GTACTTATTAGGGCCCACACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGATGACATCGCGCAGCTaGTCCTGGATCTCGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLIRAHTSAQQRSQQTLWMTSRS*SWISVI Trigger: GATCACCGAGATCCAGGAGCAGCTGCGCGATGTCAT...CCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCTAATAAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTGAAGGAAATCTGGTCTaGGAGCTGTTTGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTEGNLV*ELFGWR Trigger: TCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTC...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACCAGAAGGGTTGCCACTaGAGAAGGAAATCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYQKGCH*RRKSGL Trigger: CAGACCAGATTTCCTTCTTCAGTGGCAACCCTTCTG...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGTGGATCTCGGTGATCTaGAGGTCTTTCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HATTHPSFCKVRCARQAGWISVI*RSFWAQ Trigger: CTGTGCCCAGAAAGACCTGCAGATCACCGAGATCCA...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTTGGATCTCGGTGATCTaGAGGTCTTTCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CYHPPQLLQGQMCKTSRAWISVI*RSFWAQ Trigger: CTGTGCCCAGAAAGACCTGCAGATCACCGAGATCCA...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTTGGGAGCTGTTTGGATaGAGACTCTGGGGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYHPPQLLQGQMCKTSRAWELFG*RLWGCV Trigger: AACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCA...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGTCGATTGAGTTGAACTaGCGGCCATTGCACGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HATTHPSFCKVRCARQAGSIELN*RPLHAM Trigger: CATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGA...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTTCGATTGAGTTGAACTaGCGGCCATTGCACGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CYHPPQLLQGQMCKTSRASIELN*RPLHAM Trigger: CATGGCGTGCAATGGCCGCCAGTTCAACTCAATCGA...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACGCCCACAGCCTATGTaGCCGCATATTAAACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKRPQPM*PHIKQI Trigger: GATTTGTTTAATATGCGGCCACATAGGCTGTGGGCG...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGATCTGCAGGTCTTTCTaGGCACAGGTCTCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HATTHPSFCKVRCARQAGICRSF*AQVSFS Trigger: GCTGAAGGAGACCTGTGCCCAGAAAGACCTGCAGAT...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| 3UTR CAA 72 bp | ACGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDSCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR GCA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTTCCCGACGGCCAAGGTaGTGGTGGATGATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NATAHSTELDGDQQHRQRSRRPR*WWMMAA Trigger: AGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGA...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| CDS-3UTR GCA 90 bp | CACAGCATGGCACTGCGCCGAACGTCTTCTTTTAGGGAGGTCATCTTATTTGTCTCCCGACGGCCAAGGTaGTGGTGGATGATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSMALRRTSSFREVILFVSRRPR*WWMMAA Trigger: AGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGA...GACAAATAAGATGACCTCCCTAAAAGAAGACGTTCGGCGCAGTGCCATGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| CDS-3UTR GCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCAATGACATCGCGCAGCTaGTCCTGGATCTCGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPMTSRS*SWISVI Trigger: GATCACCGAGATCCAGGAGCAGCTGCGCGATGTCAT...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAAAGGTGCATAATGCCGTaGACTATTTCAACAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKRCIMP*TISTEG Trigger: CCCTTCTGTTGAAATAGTCCACGGCATTATGCACCT...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTGGCACACAGGACACGTaGTGTCATCCCACCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NATAHSTELDGDQQHRQRGTQDT*CHPTAA Trigger: TGCAGCGGTGGGATGACACCACGTGTCCTGTGTGCC...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTTTCTTCCACTGGCTCTaGCGTTTGACAGTATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CYHPPQLLQGQMCKTSRAFFHWL*RLTVSA Trigger: TGCCGATACTGTCAAACGCCAGAGCCAGTGGAAGAA...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCTTTGTTTTCTTCCACTaGCTCTGGCGTTTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPFVFFH*LWRLTV Trigger: TACTGTCAAACGCCAGAGCCAGTGGAAGAAAACAAA...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAACTGGGTATACTCCATTTGCCCCAAGCCAGGCTGCTGAAGACAAGCCTGCATCTTCGATTGAGTTaGACTGGCGGCCATTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PKLGILHLPQARLLKTSLHLRLS*TGGHCT Trigger: CGTGCAATGGCCGCCAGTTCAACTCAATCGAAGATG...CAGGCTTGTCTTCAGCAGCCTGGCTTGGGGCAAATGGAGTATACCCAGTTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACGCTCCAGACACACAGTaGACTTGGGCAGCTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LISMLPPTPASARSDVQDAPDTQ*TWAAPS Trigger: TGACGGAGCTGCCCAAGTGCACTGTGTGTCTGGAGC...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGTCCATCCGTCTTGCTTaGAACCAGTCGATGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: HATTHPSFCKVRCARQAGSIRLA*NQSMDI Trigger: TATGTCCATCGACTGGTTGCAAGCAAGACGGATGGA...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCATCCCAGTATATCCGCTaGGATTCCAGCTGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPSQYIR*DSSWLV Trigger: GACAAGCCAGCTGGAATCGCAGCGGATATACTGGGA...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACACTTGCCCCTCTTGCTaGGGCCCTTTCTGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LISMLPPTPASARSDVQDTCPSC*GPFWTA Trigger: TGCAGTCCAGAAAGGGCCGCAGCAAGAGGGGCAAGT...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TGGATGGAGACTCTGGGGCTGTGTTCACAGACTCACTCTGTTCTCTACTTCTCTCGGCCAAGGTGCTGGTaGATGATGGCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WMETLGLCSQTHSVLYFSRPRCW*MMAAFS Trigger: GGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCG...AGAGAAGTAGAGAACAGAGTGAGTCTGTGAACACAGCCCCAGAGTCTCCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTCTCCTCACACTACACTATGGCGATGTTGATCTaGCCTTCCTGGATCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PWEVLPTLPPLLVSSHYTMAMLI*PSWISC Trigger: GCAGGAGATCCAGGAAGGCCAGATCAACATCGCCAT...AGTGTAGTGTGAGGAGACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| 3UTR CAA 72 bp | ATCTCCTCTGCCGTGTCCTTCTCTATGCGCACGATTTaGTTCTCCCAGTATATCCGCTGCGATTCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSAVSFSMRTI*FSQYIRCDSSW Trigger: CCAGCTGGAATCGCAGCGGATATACTGGGAGAACAAAATCGTGCGCATAGAGAAGGACACGGCAGAGGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR TCA 90 bp | GATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTCGGAAAGAGACAGGGGCTGCTaGAGGCTTCTTTTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSCEPPCGCWDLNSGPSERDRGC*RLLFFH Trigger: GTGGAAGAAAAGAAGCCTTCAGCAGCCCCTGTCTCT...TTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR TCA 90 bp | CCTTGGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTCTCCTCACACTACACTAACTTCATAAGGTCATaGCTGGTCATGGTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PWEVLPTLPPLLVSSHYTNFIRS*LVMVAG Trigger: CCCTGCCACCATGACCAGTCATGACCTTATGAAGTT...AGTGTAGTGTGAGGAGACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCAGACGTCATCTTCGATTaGGTTGAACTGGCGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPDVIFD*VELAAI Trigger: AATGGCCGCCAGTTCAACTCAATCGAAGATGACGTC...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAATTTGTCTTGTACAGGTaGATAATGCCGTGGACTATT | + |
|
Preference number: 4 (lower is better) Translates to: GQQGCWVGCDEKGSQLWKFVLYR*IMPWTI Trigger: AATAGTCCACGGCATTATGCACCTGTACAAGACAAA...TTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTCTCCTCACACTACACTCCGTGTCCTTCTCTATaGGCACGATTTTGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PWEVLPTLPPLLVSSHYTPCPSL*ARFCSP Trigger: GGGAGAACAAAATCGTGCGCATAGAGAAGGACACGG...AGTGTAGTGTGAGGAGACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGGTCTGGGAGCTGTTTaGATGGAGACTCTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESDFVTDSCEPPCGCWDLGLGAV*METLGL Trigger: CAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACC...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CCA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCATTCTTCCACTGGCTCTaGCGTTTGACAGTATCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPFFHWL*RLTVSA Trigger: TGCCGATACTGTCAAACGCCAGAGCCAGTGGAAGAA...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTCTCCTCACACTACACTATCAGTACCATGTACTaGTTCGGAGTAGAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PWEVLPTLPPLLVSSHYTISTMY*FGVESL Trigger: CAGGGACTCTACTCCGAATCAGTACATGGTACTGAT...AGTGTAGTGTGAGGAGACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAGACTCGATGGTTGGTaGGCTGCATGGCGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LISMLPPTPASARSDVQDRLDGW*AAWRMC Trigger: ACACATACGCCATGCAGCTCACCAACCATCGAGTCT...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTTCCCAGTATATCCGCTaGGATTCCAGCTGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NATAHSTELDGDQQHRQRSQYIR*DSSWLV Trigger: GACAAGCCAGCTGGAATCGCAGCGGATATACTGGGA...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTCGGAATTTGGATGGAGACTCTaGGGCTGTGTTCACAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: DSCEPPCGCWDLNSGPSEFGWRL*GCVHRL Trigger: GAGTCTGTGAACACAGCCCCAGAGTCTCCATCCAAA...TTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACTATTTGTTTTCTTCCACTaGCTCTGGCGTTTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQGCWVGCDEKGSQLWKLFVFFH*LWRLTV Trigger: TACTGTCAAACGCCAGAGCCAGTGGAAGAAAACAAA...TAGTTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTAAAGAGAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGTCGCGCAGCTGCTCCTaGATCTCGGTGATCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKERHTAPLLVILNIVWSRSCS*ISVICR Trigger: CCTGCAGATCACCGAGATCCAGGAGCAGCTGCGCGA...CCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGGAGTCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGAACTTCATAAGGTCATaGCTGGTCATGGTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRESDFVTDSCEPPCGCWNFIRS*LVMVAG Trigger: CCCTGCCACCATGACCAGTCATGACCTTATGAAGTT...CCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGACTCCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACGTTCAATTACATCATTaGATGGGGCAACAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYVQLHH*MGQQTS Trigger: TGAAGTTTGTTGCCCCATTCAATGATGTAATTGAAC...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCGCTTCTCCTCCTCCTTaGGCTGGTTCTGCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TGTFRMESSEIKRAVTVFASPPP*AGSAAP Trigger: TGGTGCTGCAGAACCAGCTCAAGGAGGAGGAGAAGC...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTCACACAGCATGGCACTaGGCCGAACGTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NATAHSTELDGDQQHRQRHTAWH*AERLLL Trigger: TAAAAGAAGACGTTCGGCGCAGTGCCATGCTGTGTG...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGAGTCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGCACACAGCATGGCACTaGGCCGAACGTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KRESDFVTDSCEPPCGCWHTAWH*AERLLL Trigger: TAAAAGAAGACGTTCGGCGCAGTGCCATGCTGTGTG...CCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGACTCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR GCA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTGCTCCAGACACACAGTaGACTTGGGCAGCTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRHISDGVIRNKESCHCLAPDTQ*TWAAPS Trigger: TGACGGAGCTGCCCAAGTGCACTGTGTGTCTGGAGC...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTAAAGAGAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGCACTTGTTCAGCTCCTaGTCCTCCTGCAGCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSKERHTAPLLVILNIVWHLFSS*SSCSSV Trigger: CACGGAGCTGCAGGAGGAGCAGGAGCTGAACAAGTG...CCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGCTGTTTGGAAGGGTCTGGGAGCTGTTTaGATGGAGACTCTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAHSPSVGHIKYCMAVWKGLGAV*METLGL Trigger: CAGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACC...CTTCCAAACAGCCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTATGGCGTATGTGTGCTaGGTCTCCTCAAAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NATAHSTELDGDQQHRQRMAYVC*VSSKCL Trigger: CAAGCACTTTGAGGAGACCCAGCACACATACGCCAT...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGCAGAAGGGTTGCCACTaGAGAAGGAAATCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESDFVTDSCEPPCGCWDLQKGCH*RRKSGL Trigger: CAGACCAGATTTCCTTCTTCAGTGGCAACCCTTCTG...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGGGAGTCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGATCAGTACCATGTACTaGTTCGGAGTAGAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRESDFVTDSCEPPCGCWISTMY*FGVESL Trigger: CAGGGACTCTACTCCGAATCAGTACATGGTACTGAT...CCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGACTCCCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| 3UTR CAA 72 bp | TGTTCTCCCAGTATATCCGCTGCGATTCCAGCTGGCTaGTCAACAGGTACGAGTACTCTAACTGTAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSPSISAAIPAG*STGTSTLTVRH Trigger: ATGCCTTACAGTTAGAGTACTCGTACCTGTTGACAAGCCAGCTGGAATCGCAGCGGATATACTGGGAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| 3UTR CAA 72 bp | AGGTGCATAATGCCGTGGACTATTTCAACAGAAGGGTaGCCACTGAAGAAGGAAATCTGGTCTGGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCIMPWTISTEG*PLKKEIWSGSC Trigger: ACAGCTCCCAGACCAGATTTCCTTCTTCAGTGGCAACCCTTCTGTTGAAATAGTCCACGGCATTATGCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195952.5 |
||
| CDS-3UTR TCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACCACCGCTGCAGACACTaGCTATGGAAGCTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIDRHISDGVIRNKESCHHRCRH*LWKLWL Trigger: CAACCACAGCTTCCATAGTCAGTGTCTGCAGCGGTG...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGTCCCGACGGCCAAGGTaGTGGTGGATGATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVQLICYKLPDVPGSKERSRRPR*WWMMAA Trigger: AGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGA...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 |
||
| CDS-3UTR GCA 90 bp | TTATTTATTATATGTAAGTACACTGTCGCTGTCTTCAGACACTCCAGAAGAGGGTCCCGACGGCCAAGGTaGTGGTGGATGATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRHSRRGSRRPR*WWMMAA Trigger: AGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGA...CCCTCTTCTGGAGTGTCTGAAGACAGCGACAGTGTACTTACATATAATAAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR GCA 90 bp | GAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGCTGTTTGGAAGTGCATGGCGTATGTGTaGTGGGTCTCCTCAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EAHSPSVGHIKYCMAVWKCMAYV*WVSSKC Trigger: GCACTTTGAGGAGACCCAGCACACATACGCCATGCA...CTTCCAAACAGCCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACCGATGGTTGGTGAGCTaGATGGCGTATGTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIDRHISDGVIRNKESCHRWLVS*MAYVCW Trigger: CCAGCACACATACGCCATGCAGCTCACCAACCATCG...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | ATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTGAATAAATACAATGGAAAACACTTGTTCAGCTCCTaGTCCTCCTGCAGCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYPGTQLQVRQLNKYNGKHLFSS*SSCSSV Trigger: CACGGAGCTGCAGGAGGAGCAGGAGCTGAACAAGTG...TTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTCGCTGTCTTCAGACACTCCAGAAGAGGGAGTCGGCCAAGGTGCTGGTaGATGATGGCTGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHSRRGSRPRCW*MMAAFS Trigger: GGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCG...ACTCCCTCTTCTGGAGTGTCTGAAGACAGCGACAGTGTACTTACATATAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAGGTGCATAATGCCGTaGACTATTTCAACAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LISMLPPTPASARSDVQDRCIMP*TISTEG Trigger: CCCTTCTGTTGAAATAGTCCACGGCATTATGCACCT...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGGGCACACAGGACACGTaGTGTCATCCCACCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVQLICYKLPDVPGSKERGTQDT*CHPTAA Trigger: TGCAGCGGTGGGATGACACCACGTGTCCTGTGTGCC...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTAAAGAGAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGATCTGCAGGTCTTTCTaGGCACAGGTCTCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKERHTAPLLVILNIVWICRSF*AQVSFS Trigger: GCTGAAGGAGACCTGTGCCCAGAAAGACCTGCAGAT...CCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACAGAGACAGGGGCTGCTaGAGGCTTCTTTTCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LIDRHISDGVIRNKESCHRDRGC*RLLFFH Trigger: GTGGAAGAAAAGAAGCCTTCAGCAGCCCCTGTCTCT...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGGCTCCTGGATCTCGGTaGTCTGCAGGTCTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQLICYKLPDVPGSKERAPGSR*SAGLSG Trigger: CCCAGAAAGACCTGCAGATCACCGAGATCCAGGAGC...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | GATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTCGGAATTTGTCTTGTACAGGTaGATAATGCCGTGGACTATT | + |
|
Preference number: 4 (lower is better) Translates to: DSCEPPCGCWDLNSGPSEFVLYR*IMPWTI Trigger: AATAGTCCACGGCATTATGCACCTGTACAAGACAAA...TTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR GCA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCACACAGCATGGCACTaGGCCGAACGTCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: DRHISDGVIRNKESCHCLHTAWH*AERLLL Trigger: TAAAAGAAGACGTTCGGCGCAGTGCCATGCTGTGTG...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | ATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTGAATAAATACAATGGAAAACGATGGTTGGTGAGCTaGATGGCGTATGTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYPGTQLQVRQLNKYNGKRWLVS*MAYVCW Trigger: CCAGCACACATACGCCATGCAGCTCACCAACCATCG...TTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCCGTGTCCTTCTCTATaGGCACGATTTTGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRHISDGVIRNKESCHCLPCPSL*ARFCSP Trigger: GGGAGAACAAAATCGTGCGCATAGAGAAGGACACGG...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACGAAGGAAATCTGGTCTaGGAGCTGTTTGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDFVTDSCEPPCGCWDLNEGNLV*ELFGWR Trigger: TCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTC...GTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAGGTGCATAATGCCGTaGACTATTTCAACAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESDFVTDSCEPPCGCWDLRCIMP*TISTEG Trigger: CCCTTCTGTTGAAATAGTCCACGGCATTATGCACCT...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CCA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACATCCAGAGGTTTTCCTaGACACCACACTCAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LISMLPPTPASARSDVQDIQRFS*TPHSKH Trigger: ATGTTTTGAGTGTGGTGTCCAGGAAAACCTCTGGAT...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCATGGCGTATGTGTGCTaGGTCTCCTCAAAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGTFRMESSEIKRAVTVFMAYVC*VSSKCL Trigger: CAAGCACTTTGAGGAGACCCAGCACACATACGCCAT...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACGACGTCATCTTCGATTaGGTTGAACTGGCGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LIDRHISDGVIRNKESCHDVIFD*VELAAI Trigger: AATGGCCGCCAGTTCAACTCAATCGAAGATGACGTC...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTAAAGAGAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGTCCATCCGTCTTGCTTaGAACCAGTCGATGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: GSKERHTAPLLVILNIVWSIRLA*NQSMDI Trigger: TATGTCCATCGACTGGTTGCAAGCAAGACGGATGGA...CCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCTCTTTCCATCCGTCTTaGTTGCAACCAGTCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGTFRMESSEIKRAVTVFSFHPS*LQPVDG Trigger: TCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGA...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTCGCTGTCTTCAGACACTCCAGAAGAGGGAGTGTTTCTCTAGCCGTCTaGAGCAGAGAGGTGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHSRRGSVSLAV*SREVSS Trigger: GCTAGACACCTCTCTGCTGCAGACGGCTAGAGAAAC...ACTCCCTCTTCTGGAGTGTCTGAAGACAGCGACAGTGTACTTACATATAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCCGCCCACAGCCTATGTaGCCGCATATTAAACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TGTFRMESSEIKRAVTVFRPQPM*PHIKQI Trigger: GATTTGTTTAATATGCGGCCACATAGGCTGTGGGCG...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| 3UTR CAA 72 bp | CACACTCGTACTGAACGATCTTTCCATCCGTCTTGCTaGCAACCAGTCGATGGACATAATTATCTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTRTERSFHPSC*QPVDGHNYLQH Trigger: ATGCTGGAGATAATTATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAAAGATCGTTCAGTACGAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140996.6 |
||
| CDS-3UTR CCA 90 bp | TTATTTATTATATGTAAGTACACTGTCGCTGTCTTCAGACACTCCAGAAGAGGGTGGGAGCTGTTTGGATaGAGACTCTGGGGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRHSRRGWELFG*RLWGCV Trigger: AACACAGCCCCAGAGTCTCCATCCAAACAGCTCCCA...CCCTCTTCTGGAGTGTCTGAAGACAGCGACAGTGTACTTACATATAATAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR TCA 90 bp | ATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTGAATAAATACAATGGAAAAATCAGTACCATGTACTaGTTCGGAGTAGAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYPGTQLQVRQLNKYNGKISTMY*FGVESL Trigger: CAGGGACTCTACTCCGAATCAGTACATGGTACTGAT...TTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGTTTGGATGGAGACTCTaGGGCTGTGTTCACAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQLICYKLPDVPGSKERFGWRL*GCVHRL Trigger: GAGTCTGTGAACACAGCCCCAGAGTCTCCATCCAAA...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CCA 90 bp | ATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTGAATAAATACAATGGAAAAGAAGGAAATCTGGTCTaGGAGCTGTTTGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYPGTQLQVRQLNKYNGKEGNLV*ELFGWR Trigger: TCTCCATCCAAACAGCTCCCAGACCAGATTTCCTTC...TTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | TCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACGTTCAATTACATCATTaGATGGGGCAACAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDFVTDSCEPPCGCWDLNVQLHH*MGQQTS Trigger: TGAAGTTTGTTGCCCCATTCAATGATGTAATTGAAC...GTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACATCCAGAGGTTTTCCTaGACACCACACTCAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LIDRHISDGVIRNKESCHIQRFS*TPHSKH Trigger: ATGTTTTGAGTGTGGTGTCCAGGAAAACCTCTGGAT...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCGTTCAATTACATCATTaGATGGGGCAACAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGTFRMESSEIKRAVTVFVQLHH*MGQQTS Trigger: TGAAGTTTGTTGCCCCATTCAATGATGTAATTGAAC...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR GCA 90 bp | CTTATTGACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTTTGTCTTGTACAGGTaGATAATGCCGTGGACTATT | + |
|
Preference number: 4 (lower is better) Translates to: LIDRHISDGVIRNKESCHFVLYR*IMPWTI Trigger: AATAGTCCACGGCATTATGCACCTGTACAAGACAAA...GTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTCAATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| 3UTR CAA 72 bp | GTACTGATTCGGAGTAGAGTCCCTGATGATTTTCATTaGTTCAATTACATCATTGAATGGGGCAACAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLIRSRVPDDFH*FNYIIEWGNKL Trigger: AAGTTTGTTGCCCCATTCAATGATGTAATTGAACAAATGAAAATCATCAGGGACTCTACTCCGAATCAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140996.6 ENSMUST00000195952.5 |
||
| CDS-3UTR CAA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCCCGGAAGAGGGTGGGTaGGGCGCTGAGGCCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPPEEGG*GAEAMA Trigger: CGCCATGGCCTCAGCGCCCAACCCACCCTCTTCCGG...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CAA 90 bp | CCGCACAAGCCTGGGGGCTACCCAGCTGGAAGGCAGAATGGCCATGAGGTGACTTTGGCGCGCAGACACTaGTTCAGCTCCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHKPGGYPAGRQNGHEVTLARRH*FSSCSS Trigger: GGAGGAGCAGGAGCTGAACAAGTGTCTGCGCGCCAA...AGTCACCTCATGGCCATTCTGCCTTCCAGCTGGGTAGCCCCCAGGCTTGTGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACCGGAAGAGGGTGGGTaGGGCGCTGAGGCCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPPEEGG*GAEAMA Trigger: CGCCATGGCCTCAGCGCCCAACCCACCCTCTTCCGG...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | AAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACAGCCTTCCCAGGCATTTCCCTCCCAGACTCGATGGTaGGTGAGCTGCATGGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KPLPVGCFHWPQPSQAFPSQTRW*VSCMAY Trigger: ATACGCCATGCAGCTCACCAACCATCGAGTCTGGGA...GGGAAATGCCTGGGAAGGCTGTGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | TGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTACAGCTCCGTGCTGAGCTaGGCCACTCTGGTGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WPQPSQAFPPTCVVKHCYSSVLS*ATLVFS Trigger: GCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCT...GTAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | TGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTAGCTCCGTGCTGAGCTaGGCCACTCTGGTGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CYHPPQLLQGQMCKTSRASSVLS*ATLVFS Trigger: GCTGAACACCAGAGTGGCCAAGCTCAGCACGGAGCT...AGCCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCACTGGCTCTGGCGTTaGACAGTATCGGCACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HATTHPSFCKVRCARQAGHWLWR*TVSAHR Trigger: CCTGTGTGCCGATACTGTCAAACGCCAGAGCCAGTG...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | GTACTTATTAGGGCCCACACTTCCGCTCAGCAAAGGTCCCAGCAGACCCTGTGGGAGGCCATGGCGATGTaGATCTGGCCTTCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLIRAHTSAQQRSQQTLWEAMAM*IWPSWI Trigger: GATCCAGGAAGGCCAGATCAACATCGCCATGGCCTC...CCACAGGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCTAATAAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCTATGGAAGCTGTGGTaGCAGAGGGTGGTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HATTHPSFCKVRCARQAGLWKLW*QRVVRM Trigger: CATCCTCACCACCCTCTGCAACCACAGCTTCCATAG...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | GCCGGAGGATCTGCAGTGCTGGCCTGCCCTGAGGAAGAGCCGGCTACAGAGGTCCCACACTCAAAACATTaGTTTTCTTCCACTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGGSAVLACPEEEPATEVPHSKH*FSSTGS Trigger: AGAGCCAGTGGAAGAAAACAAATGTTTTGAGTGTGG...GACCTCTGTAGCCGGCTCTTCCTCAGGGCAGGCCAGCACTGCAGATCCTCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CCTTGGGAAGTGCTGCCAACCCTTCCCCCTCTTTTAGTCTCCTCACACTACACTTGCAGCACCAGCTGGTaGGCGCGCAGACACTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PWEVLPTLPPLLVSSHYTCSTSW*ARRHLF Trigger: GAACAAGTGTCTGCGCGCCAACCAGCTGGTGCTGCA...AGTGTAGTGTGAGGAGACTAAAAGAGGGGGAAGGGTTGGCAGCACTTCCCAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTATTCCATCCGTCTTGCTaGCAACCAGTCGATGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LATAFPGISPNLCGEALLFHPSC*QPVDGH Trigger: ATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAA...TAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCAGAGGCCATGGCGATGTaGATCTGGCCTTCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPEAMAM*IWPSWI Trigger: GATCCAGGAAGGCCAGATCAACATCGCCATGGCCTC...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCACTATGGAAGCTGTGGTaGCAGAGGGTGGTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPLWKLW*QRVVRM Trigger: CATCCTCACCACCCTCTGCAACCACAGCTTCCATAG...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACTTGGCGCGCAGACACTaGTTCAGCTCCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LISMLPPTPASARSDVQDLARRH*FSSCSS Trigger: GGAGGAGCAGGAGCTGAACAAGTGTCTGCGCGCCAA...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS GCA 90 bp | TTCATGGTCTCAATAATCACATCCGTCATTTCCCGACGGCCAAGGTaGTGGTGGATGATGGCTGCTTTCTCCCCGGCTGACTTCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FMVSIITSVISRRPR*WWMMAAFSPADFPS Trigger: AGAAGGGAAGTCAGCCGGGGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGAAATGACGGATGTGATTATTGAGACCATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 ENSMUST00000142701.3 ENSMUST00000195952.5 |
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| CDS CCA 90 bp | ATGGTCTCAATAATCACATCCGTCATTTCCCGACGGCCAAGGTGCTaGTGGATGATGGCTGCTTTCTCCCCGGCTGACTTCCCTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MVSIITSVISRRPRC*WMMAAFSPADFPSR Trigger: TCTAGAAGGGAAGTCAGCCGGGGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGAAATGACGGATGTGATTATTGAGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 ENSMUST00000142701.3 ENSMUST00000195952.5 |
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| CDS-3UTR CAA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACTGGTCTGGGAGCTGTTaGGATGGAGACTCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LISMLPPTPASARSDVQDWSGSC*DGDSGA Trigger: AGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCA...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTACAGCACATTCCACTGAACTGGACGGTGATCAGCAACACAGGCAACGTCACTGGCTCTGGCGTTaGACAGTATCGGCACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NATAHSTELDGDQQHRQRHWLWR*TVSAHR Trigger: CCTGTGTGCCGATACTGTCAAACGCCAGAGCCAGTG...ACGTTGCCTGTGTTGCTGATCACCGTCCAGTTCAGTGGAATGTGCTGTAGCATT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCACAGCCTTCCCAGGCATTTCCCCCAACCTGTGTGGTGAAGCACTGCTAAACTTGGTCTTCATGTaGTTAATCTCCTCTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LATAFPGISPNLCGEALLNLVFM*LISSAV Trigger: CACGGCAGAGGAGATTAACAACATGAAGACCAAGTT...TAGCAGTGCTTCACCACACAGGTTGGGGGAAATGCCTGGGAAGGCTGTGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CAA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAGCTTCTCCTCCTCCTaGAGCTGGTTCTGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LISMLPPTPASARSDVQDSFSSS*SWFCST Trigger: GGTGCTGCAGAACCAGCTCAAGGAGGAGGAGAAGCT...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTCAAGTAGTTTGGAAACCTCTGCCCGTCGGCTGCTTCCACTGGCCAATCTTTCCATCCGTCTaGCTTGCAACCAGTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: KDLQVVWKPLPVGCFHWPIFPSV*LATSRW Trigger: CCATCGACTGGTTGCAAGCAAGACGGATGGAAAGAT...TGGCCAGTGGAAGCAGCCGACGGGCAGAGGTTTCCAAACTACTTGAAGGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGAACTTGGTCTTCATGTaGTTAATCTCCTCTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: HATTHPSFCKVRCARQAGNLVFM*LISSAV Trigger: CACGGCAGAGGAGATTAACAACATGAAGACCAAGTT...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACAAGCAGGGCCACACTCAAAACATTaGTTTTCTTCCACTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HATTHPSFCKVRCARQAGPHSKH*FSSTGS Trigger: AGAGCCAGTGGAAGAAAACAAATGTTTTGAGTGTGG...CCCTGCTTGTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | GACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTTGCAGCACCAGCTGGTaGGCGCGCAGACACTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DRHISDGVIRNKESCHCLCSTSW*ARRHLF Trigger: GAACAAGTGTCTGCGCGCCAACCAGCTGGTGCTGCA...AAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | GAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGCTGTTTGGAAGTGGTCTGGGAGCTGTTaGGATGGAGACTCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EAHSPSVGHIKYCMAVWKWSGSC*DGDSGA Trigger: AGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCA...CTTCCAAACAGCCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACTCATCTTCGATTGAGTaGAACTGGCGGCCATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LISMLPPTPASARSDVQDSSSIE*NWRPLH Trigger: GTGCAATGGCCGCCAGTTCAACTCAATCGAAGATGA...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | TTAATTAGCATGCTACCACCCACCCCAGCTTCTGCAAGGTCAGATGTGCAAGACTTCCATCCGTCTTGCTaGCAACCAGTCGATGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LISMLPPTPASARSDVQDFHPSC*QPVDGH Trigger: ATGTCCATCGACTGGTTGCAAGCAAGACGGATGGAA...GTCTTGCACATCTGACCTTGCAGAAGCTGGGGTGGGTGGTAGCATGCTAATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGGGCTGCTGGGTGGGTTGTGATGAAAAGGGGAGCCAGCTCTGGAAACTATGTTCAATTACATCATaGAATGGGGCAACAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QQGCWVGCDEKGSQLWKLCSITS*NGATNF Trigger: GAAGTTTGTTGCCCCATTCAATGATGTAATTGAACA...TAGTTTCCAGAGCTGGCTCCCCTTTTCATCACAACCCACCCAGCAGCCCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCACATTTCGGATGGAGTCATCAGAAATAAAGAGAGCTGTCACTGTCTTCTCCCAGACTCGATGGTaGGTGAGCTGCATGGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TGTFRMESSEIKRAVTVFSQTRW*VSCMAY Trigger: ATACGCCATGCAGCTCACCAACCATCGAGTCTGGGA...GAAGACAGTGACAGCTCTCTTTATTTCTGATGACTCCATCCGAAATGTGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTCGCTGTCTTCAGACACTCCAGAAGAGGGAGTTGGTCTGGGAGCTGTTaGGATGGAGACTCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FIICKYTVAVFRHSRRGSWSGSC*DGDSGA Trigger: AGCCCCAGAGTCTCCATCCAAACAGCTCCCAGACCA...ACTCCCTCTTCTGGAGTGTCTGAAGACAGCGACAGTGTACTTACATATAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
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| CDS-3UTR CAA 90 bp | GGCTCTAAAGAGAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGTCATCTTCGATTGAGTaGAACTGGCGGCCATTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSKERHTAPLLVILNIVWSSSIE*NWRPLH Trigger: GTGCAATGGCCGCCAGTTCAACTCAATCGAAGATGA...CCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGAGCTTCTCCTCCTCCTaGAGCTGGTTCTGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SVQLICYKLPDVPGSKERSFSSS*SWFCST Trigger: GGTGCTGCAGAACCAGCTCAAGGAGGAGGAGAAGCT...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | GATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTCGGAAGAGCCATATCTGAATTaGAGGCATAAAACCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DSCEPPCGCWDLNSGPSEEPYLN*RHKTHK Trigger: TTTGTGGGTTTTATGCCTCAAATTCAGATATGGCTC...TTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
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| CDS-3UTR CAA 90 bp | ATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTGAATAAATACAATGGAAAAATCTTTCCATCCGTCTaGCTTGCAACCAGTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: IYPGTQLQVRQLNKYNGKIFPSV*LATSRW Trigger: CCATCGACTGGTTGCAAGCAAGACGGATGGAAAGAT...TTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS-3UTR CAA 90 bp | GAGTCAGATTTCGTTACGGATAGTTGTGAGCCACCATGTGGTTGCTGGGATTTGTGTTCAATTACATCATaGAATGGGGCAACAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESDFVTDSCEPPCGCWDLCSITS*NGATNF Trigger: GAAGTTTGTTGCCCCATTCAATGATGTAATTGAACA...CAAATCCCAGCAACCACATGGTGGCTCACAACTATCCGTAACGAAATCTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS-3UTR CAA 90 bp | ATTTACCCTGGAACCCAACTGCAAGTGCGCCAACTGAATAAATACAATGGAAAAGCCAATGTCTTCTTTTaGATCTCCTCATCAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: IYPGTQLQVRQLNKYNGKANVFF*ISSSDI Trigger: GATGTCTGATGAGGAGATCAAAAAGAAGACATTGGC...TTTTCCATTGTATTTATTCAGTTGGCGCACTTGCAGTTGGGTTCCAGGGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000140996.6 |
||
| CDS-3UTR CAA 90 bp | GGCTCTAAAGAGAGGCACACAGCCCCTCTGTTGGTCATATTAAATATTGTATGGTGTTCAATTACATCATaGAATGGGGCAACAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSKERHTAPLLVILNIVWCSITS*NGATNF Trigger: GAAGTTTGTTGCCCCATTCAATGATGTAATTGAACA...CCATACAATATTTAATATGACCAACAGAGGGGCTGTGTGCCTCTCTTTAGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTTCAATTAATCTGTTACAAGTTACCTGATGTTCCTGGCTCTAAAGAGAGGATTTCAACAGAAGGGTaGCCACTGAAGAAGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SVQLICYKLPDVPGSKERISTEG*PLKKEI Trigger: GATTTCCTTCTTCAGTGGCAACCCTTCTGTTGAAAT...CCTCTCTTTAGAGCCAGGAACATCAGGTAACTTGTAACAGATTAATTGAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 |
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| CDS TCA 90 bp | ATCTTAACTTTTACCTGCGCACTGAACTTGATCAGTACCATGTACTaGTTCGGAGTAGAGTCCCTGATGATTTTCATTTGTTCAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: ILTFTCALNLISTMY*FGVESLMIFICSIT Trigger: TGTAATTGAACAAATGAAAATCATCAGGGACTCTACTCCGAATCAGTACATGGTACTGATCAAGTTCAGTGCGCAGGTAAAAGTTAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142701.3 |
||
| CDS TCA 72 bp | GCGGCGCTGAAGCCGAAGTCGGTGGGGACCGGCGAGTaGCCCGCGAGCTCCAGTCGGATGACCACCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AALKPKSVGTGE*PASSSRMTTSD Trigger: GTCACTGGTGGTCATCCGACTGGAGCTCGCGGGTCACTCGCCGGTCCCCACCGACTTCGGCTTCAGCGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000140996.6 |
||
| CDS TCA 72 bp | CATCCGTCATTTCCCGACGGCCAAGGTGCTGGTGGATaGTGGCTGCTTTCTCCCCGGCTGACTTCCCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: HPSFPDGQGAGG*WLLSPRLTSLL Trigger: TAGAAGGGAAGTCAGCCGGGGAGAAAGCAGCCATCATCCACCAGCACCTTGGCCGTCGGGAAATGACGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031414.15 ENSMUST00000111765.8 ENSMUST00000140996.6 ENSMUST00000142701.3 ENSMUST00000195952.5 |
||
| CDS CAA 90 bp | GACTTCCCTTCTAGACAGGCGACAGCGGAAGCCAATGTCTTCTTTTaGATCTCCTCATCAGACATCTCTCCAGCGGCGGCGCTGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DFPSRQATAEANVFF*ISSSDISPAAALKP Trigger: CGGCTTCAGCGCCGCCGCTGGAGAGATGTCTGATGAGGAGATCAAAAAGAAGACATTGGCTTCCGCTGTCGCCTGTCTAGAAGGGAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000140996.6 |
||
| CDS TCA 72 bp | CTAGACAGGCGACAGCGGAAGCCAATGTCTTCTTTTTaGTCTCCTCATCAGACATCTCTCCAGCGGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LDRRQRKPMSSF*SPHQTSLQRRR Trigger: GCGCCGCCGCTGGAGAGATGTCTGATGAGGAGATCAAAAAGAAGACATTGGCTTCCGCTGTCGCCTGTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000140996.6 |
||
| CDS CAA 72 bp | TCTAGACAGGCGACAGCGGAAGCCAATGTCTTCTTTTaGATCTCCTCATCAGACATCTCTCCAGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SRQATAEANVFF*ISSSDISPAAA Trigger: CGCCGCCGCTGGAGAGATGTCTGATGAGGAGATCAAAAAGAAGACATTGGCTTCCGCTGTCGCCTGTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031414.15 ENSMUST00000140996.6 |
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