Pregenerated sensors for BRAF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002413Ensembl transcript IDs: ENSMUST00000002487.15
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCCTCATGTGCTTCCCGTCTGTCTCCCCTGTGGACATGGTAGATaGGAACCCGCAATTGTGGGCGCTGGATATGGTACTCAGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: TPHVLPVCLPCGHGR*EPAIVGAGYGTQPA Trigger: GGCAGGCTGAGTACCATATCCAGCGCCCACAATTGCGGGTTCCCATCTACCATGTCCACAGGGGAGACAGACGGGAAGCACATGAGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CTGCAGCCACTTCATGGGCCGACAGCTGCAGCCCTCTGGGATGAGTaGAGCAGCCACACTGTCTATACAGTTACTCATAAAGCGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LQPLHGPTAAALWDE*SSHTVYTVTHKALC Trigger: GCAGAGCGCTTTATGAGTAACTGTATAGACAGTGTGGCTGCTTCACTCATCCCAGAGGGCTGCAGCTGTCGGCCCATGAAGTGGCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CCA 90 bp | CCGTCTGTCTCCCCTGTGGACATGGTAGATGGGAACCCGCAATTGTaGGCGCTGGATATGGTACTCAGCCTGCCAGGAAAAGCAAATCAT | + |
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Preference number: 1 (lower is better) Translates to: PSVSPVDMVDGNPQL*ALDMVLSLPGKANH Trigger: ATGATTTGCTTTTCCTGGCAGGCTGAGTACCATATCCAGCGCCCACAATTGCGGGTTCCCATCTACCATGTCCACAGGGGAGACAGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | AGGAGGAAACAATCCCCCAACCCTCTCCTCAATTGCTGGACCCAATaGGAAAAGAAGGCAATGTGTGCCAGCACTGAGCAGCCTGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: RRKQSPNPLLNCWTQ*EKKAMCASTEQPEW Trigger: CCACTCAGGCTGCTCAGTGCTGGCACACATTGCCTTCTTTTCTCATTGGGTCCAGCAATTGAGGAGAGGGTTGGGGGATTGTTTCCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CCCCCACCACTTAACTGTAAAAAGCTTCGCTGTGACAGCAGCTGCTaGGGACTGAACAGGCGCTACACAAGGGAATGCTGCATTTACTCC | + |
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Preference number: 1 (lower is better) Translates to: PPPLNCKKLRCDSSC*GLNRRYTRECCIYS Trigger: GGAGTAAATGCAGCATTCCCTTGTGTAGCGCCTGTTCAGTCCTCAGCAGCTGCTGTCACAGCGAAGCTTTTTACAGTTAAGTGGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | AGTGCTCCACAACATAATCCCAGAATAGGCAAGAACGATGCTTGGTaGTGGAAATCGCCCCATCAGATGACCAGCCACAGGCTGATCTGG | + |
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Preference number: 1 (lower is better) Translates to: SAPQHNPRIGKNDAW*WKSPHQMTSHRLIW Trigger: CCAGATCAGCCTGTGGCTGGTCATCTGATGGGGCGATTTCCATCACCAAGCATCGTTCTTGCCTATTCTGGGATTATGTTGTGGAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR GCA 90 bp | AGAGAACTACATAACTCCTACAACTCTGTAAACACACCCCTCATGTaGTTCCCGTCTGTCTCCCCTGTGGACATGGTAGATGGGAACCCG | + |
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Preference number: 1 (lower is better) Translates to: RELHNSYNSVNTPLM*FPSVSPVDMVDGNP Trigger: CGGGTTCCCATCTACCATGTCCACAGGGGAGACAGACGGGAAGCACATGAGGGGTGTGTTTACAGAGTTGTAGGAGTTATGTAGTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR GCA 90 bp | GTTGCCATAGGTGCGGGTGGTGAAACAGGAGCCATAGGAATTCACTaGATTTCAAACAGGAAGCATTTCCTCCCCTCTCCCTTACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VAIGAGGETGAIGIH*ISNRKHFLPSPLLE Trigger: CTCCAGTAAGGGAGAGGGGAGGAAATGCTTCCTGTTTGAAATGCAGTGAATTCCTATGGCTCCTGTTTCACCACCCGCACCTATGGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | AGGCGCTACACAAGGGAATGCTGCATTTACTCCATCCCTCAGAAATaGACGGTGCTGGACAGGGAAAGTGCTCCACAACATAATCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RRYTRECCIYSIPQK*TVLDRESAPQHNPR Trigger: TCTGGGATTATGTTGTGGAGCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCATTCCCTTGTGTAGCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CGCCCTCTTAGCTGGGCAGTCTCTTCAGATGAGTATCTGTGCATGTaGCAAAGCTGTGGCCAACTCACTTTGAAGGCATACAGTTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: RPLSWAVSSDEYLCM*QSCGQLTLKAYSFA Trigger: GGCAAAACTGTATGCCTTCAAAGTGAGTTGGCCACAGCTTTGTCACATGCACAGATACTCATCTGAAGAGACTGCCCAGCTAAGAGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CCA 90 bp | TGCATTTCAAACAGGAAGCATTTCCTCCCCTCTCCCTTACTGGAGTaGAGACTTGTCCTCAGACCAAGAAGTACGGGTGACCTTTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: CISNRKHFLPSPLLE*RLVLRPRSTGDLLG Trigger: CCCTAAAAGGTCACCCGTACTTCTTGGTCTGAGGACAAGTCTCCACTCCAGTAAGGGAGAGGGGAGGAAATGCTTCCTGTTTGAAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR GCA 90 bp | AGGGCAAAGTCGACTGGCAGACTTTCCATAGCAATTTTCCCAAGCTaGAGCAGCAAATTCTTTCCATCATGCCTGACCACCAAAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: RAKSTGRLSIAIFPS*SSKFFPSCLTTKRA Trigger: TGCCCTTTTGGTGGTCAGGCATGATGGAAAGAATTTGCTGCTGCAGCTTGGGAAAATTGCTATGGAAAGTCTGCCAGTCGACTTTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CCA 90 bp | TTCACTGCATTTCAAACAGGAAGCATTTCCTCCCCTCTCCCTTACTaGAGTGGAGACTTGTCCTCAGACCAAGAAGTACGGGTGACCTTT | + |
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Preference number: 1 (lower is better) Translates to: FTAFQTGSISSPLPY*SGDLSSDQEVRVTF Trigger: AAAGGTCACCCGTACTTCTTGGTCTGAGGACAAGTCTCCACTCCAGTAAGGGAGAGGGGAGGAAATGCTTCCTGTTTGAAATGCAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR GCA 90 bp | CTATTCTATTGTCCCTTTATAGAAGACACTTCAGAGACAGCCCCCTaGCTTCCATCATGTGCTGGAGCAGTCAGTAGCACTAGCCAACTT | + |
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Preference number: 1 (lower is better) Translates to: LFYCPFIEDTSETAP*LPSCAGAVSSTSQL Trigger: AAGTTGGCTAGTGCTACTGACTGCTCCAGCACATGATGGAAGGCAGGGGGCTGTCTCTGAAGTGTCTTCTATAAAGGGACAATAGAATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR GCA 90 bp | TCCATAGCAATTTTCCCAAGCTGCAGCAGCAAATTCTTTCCATCATaGCTGACCACCAAAAGGGCAGAATTCAGGGTCTCTCCTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: SIAIFPSCSSKFFPS*LTTKRAEFRVSPLS Trigger: AGAAAGAGGAGAGACCCTGAATTCTGCCCTTTTGGTGGTCAGGCATGATGGAAAGAATTTGCTGCTGCAGCTTGGGAAAATTGCTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CCA 90 bp | GACATAAACCCAACCTTTGGCAGTTACAGACAAGAGGAATGTATATaGGTTGCCATAGGTGCGGGTGGTGAAACAGGAGCCATAGGAATT | + |
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Preference number: 1 (lower is better) Translates to: DINPTFGSYRQEECI*VAIGAGGETGAIGI Trigger: AATTCCTATGGCTCCTGTTTCACCACCCGCACCTATGGCAACCCATATACATTCCTCTTGTCTGTAACTGCCAAAGGTTGGGTTTATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | TTGGTGACTGGAAGAGCTGAGAGGAAGATATGGACTGTATTTTCCTaGGAATTTGCTACATTGAGGAGGAAACAATCCCCCAACCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LVTGRAERKIWTVFS*EFATLRRKQSPNPL Trigger: GAGAGGGTTGGGGGATTGTTTCCTCCTCAATGTAGCAAATTCTCAGGAAAATACAGTCCATATCTTCCTCTCAGCTCTTCCAGTCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CACGGTGTTTTATGTCCTGGACAAAGGAGCCACGTAAGTATTTGGTaGCTGGAAGAGCTGAGAGGAAGATATGGACTGTATTTTCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: HGVLCPGQRSHVSIW*LEELRGRYGLYFPE Trigger: CTCAGGAAAATACAGTCCATATCTTCCTCTCAGCTCTTCCAGTCACCAAATACTTACGTGGCTCCTTTGTCCAGGACATAAAACACCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | TTACAGACAAGAGGAATGTATATGGGTTGCCATAGGTGCGGGTGGTaGAACAGGAGCCATAGGAATTCACTGCATTTCAAACAGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LQTRGMYMGCHRCGW*NRSHRNSLHFKQEA Trigger: TGCTTCCTGTTTGAAATGCAGTGAATTCCTATGGCTCCTGTTTCACCACCCGCACCTATGGCAACCCATATACATTCCTCTTGTCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CACACCCCAGACTCCATGAGAACCTTTTCAATGCTTGAGTGGAACTaGAGTGACATAAACCCAACCTTTGGCAGTTACAGACAAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: HTPDSMRTFSMLEWN*SDINPTFGSYRQEE Trigger: TTCCTCTTGTCTGTAACTGCCAAAGGTTGGGTTTATGTCACTTCAGTTCCACTCAAGCATTGAAAAGGTTCTCATGGAGTCTGGGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CACAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTaGTTTCCAAGGCAACAAGAGAACTACATAACTCCTACAACTCTG | + |
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Preference number: 1 (lower is better) Translates to: HSPAKHTGSTVLKQQ*FPRQQENYITPTTL Trigger: CAGAGTTGTAGGAGTTATGTAGTTCTCTTGTTGCCTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CAGATGAGTATCTGTGCATGTGACAAAGCTGTGGCCAACTCACTTTaGAGGCATACAGTTTTGCCAAACCTACTCCTAAAAAGTAGAATT | + |
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Preference number: 1 (lower is better) Translates to: QMSICACDKAVANSL*RHTVLPNLLLKSRI Trigger: AATTCTACTTTTTAGGAGTAGGTTTGGCAAAACTGTATGCCTTCAAAGTGAGTTGGCCACAGCTTTGTCACATGCACAGATACTCATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | AACTCTACTTTCTCATTTCAAGTGAGACATCACCCTATACTAAAATaGGAAAGAAGTCTGTCCCTTTGCACTCTGTCTAGACCACTTCCA | + |
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Preference number: 1 (lower is better) Translates to: NSTFSFQVRHHPILK*ERSLSLCTLSRPLP Trigger: TGGAAGTGGTCTAGACAGAGTGCAAAGGGACAGACTTCTTTCTCATTTTAGTATAGGGTGATGTCTCACTTGAAATGAGAAAGTAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | CCAAGAGTGGTCTATTTAATAGAATTGAAGAGACACGATGAATGGTaGAGTCCATCCCCTGATCAGTTAGTTTCTGACTATCTTAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: PRVVYLIELKRHDEW*SPSPDQLVSDYLRR Trigger: TCTCCTAAGATAGTCAGAAACTAACTGATCAGGGGATGGACTTCACCATTCATCGTGTCTCTTCAATTCTATTAAATAGACCACTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR TCA 90 bp | TCATGGCTAGCAAAGTGTTACCATAACTACTTAACTTCATGCGACTaGCTTAAGCTTAGGATTCTGAAATCTATTAAGCAGACTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: SWLAKCYHNYLTSCD*LKLRILKSIKQTLA Trigger: TGCCAGAGTCTGCTTAATAGATTTCAGAATCCTAAGCTTAAGTCAGTCGCATGAAGTTAAGTAGTTATGGTAACACTTTGCTAGCCATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CCA 90 bp | GGAGGCAAGTTTACACTTGAAGCTCTGAGAACTCAGTATCTAAGTTaGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: GGKFTLEALRTQYLS*QHFSENKSDAQFVV Trigger: AACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCAACTTAGATACTGAGTTCTCAGAGCTTCAAGTGTAAACTTGCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR GCA 90 bp | TTTCTGGTTGACAGAGCTGAAGTCTTAAATCATGTCTTTACAGAATaGTTTCTCCCCTACCAGCATACATCTAGCATACAGTTTATATCA | + |
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Preference number: 1 (lower is better) Translates to: FLVDRAEVLNHVFTE*FLPYQHTSSIQFIS Trigger: TGATATAAACTGTATGCTAGATGTATGCTGGTAGGGGAGAAAGCATTCTGTAAAGACATGATTTAAGACTTCAGCTCTGTCAACCAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CCA 90 bp | TCTCTATTTAAAAAGAAAATCTCACAATACCCTGAGCCTGGTTTCTaGGCACAGCTTCGTTTAATATCAACTCTACTTTCTCATTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SLFKKKISQYPEPGF*AQLRLISTLLSHFK Trigger: CTTGAAATGAGAAAGTAGAGTTGATATTAAACGAAGCTGTGCCCAGAAACCAGGCTCAGGGTATTGTGAGATTTTCTTTTTAAATAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 90 bp | TTCCCGTCTGTCTCCCCTGTGGACATGGTAGATGGGAACCCGCAATaGTGGGCGCTGGATATGGTACTCAGCCTGCCAGGAAAAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: FPSVSPVDMVDGNPQ*WALDMVLSLPGKAN Trigger: ATTTGCTTTTCCTGGCAGGCTGAGTACCATATCCAGCGCCCACAATTGCGGGTTCCCATCTACCATGTCCACAGGGGAGACAGACGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGGACGAACAGCAGCTCTaGCAGTGTCTGACAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: KHNVLGMVRTEDASPIAWDEQQL*QCLTST Trigger: TGTGCTTGTCAGACACTGTCAGAGCTGCTGTTCGTC...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTATACAGTTACTCATAAAGCGCTCTGCACAAACACGGACTTCCTTGTATGCACCCCCTTTTCTCTaGCCCGAGGCAGGCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSIQLLIKRSAQTRTSLYAPPFL*PEAGSP Trigger: AGGAGAGCCTGCCTCGGGGCAGAGAAAAGGGGGTGC...ATACAAGGAAGTCCGTGTTTGTGCAGAGCGCTTTATGAGTAACTGTATAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGACAAGTGCTGTAGAAGCAAAGGGTCGGAAGAGCAGCCAGCAATGGGAACCTGAGCCTGGTTTCTaGGCACAGCTTCGTTTAATA | + |
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Preference number: 2 (lower is better) Translates to: GETSAVEAKGRKSSQQWEPEPGF*AQLRLI Trigger: TATTAAACGAAGCTGTGCCCAGAAACCAGGCTCAGG...TTCCCATTGCTGGCTGCTCTTCCGACCCTTTGCTTCTACAGCACTTGTCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGACAAGTGCTGTAGAAGCAAAGGGTCGGAAGAGCAGCCAGCAATGGGAAGAATGGCCAAGGAGATaGCCCAGTGAAAAGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GETSAVEAKGRKSSQQWEEWPRR*PSEKCF Trigger: AAAACACTTTTCACTGGGTCATCTCCTTGGCCATTC...TTCCCATTGCTGGCTGCTCTTCCGACCCTTTGCTTCTACAGCACTTGTCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGCACGTAAGTATTTGGTaGCTGGAAGAGCTGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: KHNVLGMVRTEDASPIAWHVSIW*LEELRG Trigger: TCCTCTCAGCTCTTCCAGTCACCAAATACTTACGTG...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGTCAAAGGGGCGGGGCTaGACCAAGACAGGAAGTATT | + |
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Preference number: 2 (lower is better) Translates to: QPSQTHGFNSLKTTVISKSKGRG*TKTGSI Trigger: AATACTTCCTGTCTTGGTGCAGCCCCGCCCCTTTGA...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGGAGCTCAGGGACCGATTACCCAACCTTTTGAAGACCAGGCTTGGGGAAGCAAAGATGTTAGTGTaGATCCAGCAAGTACCATTT | + |
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Preference number: 2 (lower is better) Translates to: ARELRDRLPNLLKTRLGEAKMLV*IQQVPF Trigger: AAATGGTACTTGCTGGATCCACACTAACATCTTTGC...TTCCCCAAGCCTGGTCTTCAAAAGGTTGGGTAATCGGTCCCTGAGCTCCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGTTTGAAGACCAGGCTTaGGGAAAACAGGAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KHNVLGMVRTEDASPIAWFEDQA*GKQEEG Trigger: TCCCTCTTCCTGTTTTCCCCAAGCCTGGTCTTCAAA...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGACAAGTGCTGTAGAAGCAAAGGGTCGGAAGAGCAGCCAGCAATGGGAACACCCTATACTAAAATaGGAAAGAAGTCTGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GETSAVEAKGRKSSQQWEHPILK*ERSLSL Trigger: AAGGGACAGACTTCTTTCTCATTTTAGTATAGGGTG...TTCCCATTGCTGGCTGCTCTTCCGACCCTTTGCTTCTACAGCACTTGTCTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR GCA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGGATCTCACGAGGCACTaGAGCCACTTCATGGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: LRQRTHISHFTKVVIRCLDLTRH*SHFMGR Trigger: TCGGCCCATGAAGTGGCTGCAGTGCCTCGTGAGATC...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGGAACTAGCGCTGCAGACTAGGCAGGCCTTGTATTCACAGAGATTTACCAAGGGCAAAGTCGACTaGCAGACTTTCCATAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: ILELALQTRQALYSQRFTKGKVD*QTFHSN Trigger: ATTGCTATGGAAAGTCTGCCAGTCGACTTTGCCCTT...GGTAAATCTCTGTGAATACAAGGCCTGCCTAGTCTGCAGCGCTAGTTCCAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGTCTCTTCAGATGAGTATCTGTGCATGTGACAAAGCTGTGGCCAACTCAAAGAGGGAGAATGAATaGAGACGCCACCACGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: GQSLQMSICACDKAVANSKRENE*RRHHVY Trigger: ATAAACGTGGTGGCGTCTCCATTCATTCTCCCTCTT...TGAGTTGGCCACAGCTTTGTCACATGCACAGATACTCATCTGAAGAGACTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGACAAGTGCTGTAGAAGCAAAGGGTCGGAAGAGCAGCCAGCAATGGGAACCTCAAATACAGAAATaGGCTGTTCAGGAACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: GETSAVEAKGRKSSQQWEPQIQK*AVQEPN Trigger: ATTTGGTTCCTGAACAGCCCATTTCTGTATTTGAGG...TTCCCATTGCTGGCTGCTCTTCCGACCCTTTGCTTCTACAGCACTTGTCTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGGAACTAGCGCTGCAGACTAGGCAGGCCTTGTATTCACAGAGATTTACCAAATTCTTTCCATCATaGCTGACCACCAAAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ILELALQTRQALYSQRFTKFFPS*LTTKRA Trigger: TGCCCTTTTGGTGGTCAGGCATGATGGAAAGAATTT...GGTAAATCTCTGTGAATACAAGGCCTGCCTAGTCTGCAGCGCTAGTTCCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 90 bp | TGTCCACGGTGTTTTATGTCCTGGACAAAGGAGCCACGTAAGTATTaGGTGACTGGAAGAGCTGAGAGGAAGATATGGACTGTATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CPRCFMSWTKEPRKY*VTGRAERKIWTVFS Trigger: GGAAAATACAGTCCATATCTTCCTCTCAGCTCTTCCAGTCACCAAATACTTACGTGGCTCCTTTGTCCAGGACATAAAACACCGTGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 90 bp | CTGGAGCAGTCAGTAGCACTAGCCAACTTCATTTGCAAACAGGACTaGGGAGGCAAGTTTACACTTGAAGCTCTGAGAACTCAGTATCTA | + |
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Preference number: 2 (lower is better) Translates to: LEQSVALANFICKQD*GGKFTLEALRTQYL Trigger: TAGATACTGAGTTCTCAGAGCTTCAAGTGTAAACTTGCCTCCCAAGTCCTGTTTGCAAATGAAGTTGGCTAGTGCTACTGACTGCTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGTCTCTTCAGATGAGTATCTGTGCATGTGACAAAGCTGTGGCCAACTCATGGACTGTATTTTCCTaGGAATTTGCTACATTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GQSLQMSICACDKAVANSWTVFS*EFATLR Trigger: CCTCAATGTAGCAAATTCTCAGGAAAATACAGTCCA...TGAGTTGGCCACAGCTTTGTCACATGCACAGATACTCATCTGAAGAGACTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTATACAGTTACTCATAAAGCGCTCTGCACAAACACGGACTTCCTTGTATGGCTTCCTGCTCTCCTaGAACTCCAATGTCCCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LSIQLLIKRSAQTRTSLYGFLLS*NSNVPN Trigger: ATTAGGGACATTGGAGTTGCAGGAGAGCAGGAAGCC...ATACAAGGAAGTCCGTGTTTGTGCAGAGCGCTTTATGAGTAACTGTATAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | GTTAACATTTTATTTCCTGGGAAATGTGGCTTAGTGGTAGAACCCTaGCCTAGTGCATACAAGACCCTCGCTGCAAACCCACTGAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VNILFPGKCGLVVEP*PSAYKTLAANPLKR Trigger: TCTTTTCAGTGGGTTTGCAGCGAGGGTCTTGTATGCACTAGGCAAGGGTTCTACCACTAAGCCACATTTCCCAGGAAATAAAATGTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGGGTGACTGGAAGAGCTaGGAGGAAGATATGGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: LRQRTHISHFTKVVIRCLGDWKS*EEDMDC Trigger: ACAGTCCATATCTTCCTCTCAGCTCTTCCAGTCACC...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGTCTCCTCTTTCTTCTTaGGAATGGGCAGACTTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: QPSQTHGFNSLKTTVISKSPLSS*EWADLY Trigger: ATACAAGTCTGCCCATTCCCAAGAAGAAAGAGGAGA...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | CTAACCTCAAATACAGAAATGGGCTGTTCAGGAACCAAATCCAACAAGTCACAGCGGTGTTTTATGTCCTaGACAAAGGAGCCACGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTSNTEMGCSGTKSNKSQRCFMS*TKEPRK Trigger: CTTACGTGGCTCCTTTGTCCAGGACATAAAACACCG...CTGTGACTTGTTGGATTTGGTTCCTGAACAGCCCATTTCTGTATTTGAGGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGCTAACAATGCCAACGTaGACAAAGAAGCGAATCGTA | + |
|
Preference number: 2 (lower is better) Translates to: QPSQTHGFNSLKTTVISKLTMPT*TKKRIV Trigger: TACGATTCGCTTCTTTGTCCACGTTGGCATTGTTAG...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR TCA 90 bp | AATGCTTTCTCCCCTACCAGCATACATCTAGCATACAGTTTATATCAGATTGTCAAGAACGATGCTTGGTaGTGGAAATCGCCCCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: NAFSPTSIHLAYSLYQIVKNDAW*WKSPHQ Trigger: CTGATGGGGCGATTTCCATCACCAAGCATCGTTCTT...GACAATCTGATATAAACTGTATGCTAGATGTATGCTGGTAGGGGAGAAAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR TCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTGCCCTCTGGGATGAGTaGAGCAGCCACACTGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: WQHFSENKSDAQFVVVFSALWDE*SSHTVY Trigger: ATAGACAGTGTGGCTGCTTCACTCATCCCAGAGGGC...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGAAAATTTCCATGCTTTaGGGAGCCCGTGGGAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRQRTHISHFTKVVIRCLKISML*GARGSR Trigger: TCTACTCCCACGGGCTCCTCAAAGCATGGAAATTTT...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | AATGCTTTCTCCCCTACCAGCATACATCTAGCATACAGTTTATATCAGATTGTCAGCCACAGGCTGATCTaGTGGTTAGAAGGGCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NAFSPTSIHLAYSLYQIVSHRLI*WLEGQS Trigger: ACTTTGCCCTTCTAACCACCAGATCAGCCTGTGGCT...GACAATCTGATATAAACTGTATGCTAGATGTATGCTGGTAGGGGAGAAAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTGGAACTAGCGCTGCAGACTAGGCAGGCCTTGTATTCACAGAGATTTACCTATTTTGGAAGTTCTTaGCTTGAAGTTGCTAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: ILELALQTRQALYSQRFTYFGSS*LEVAKY Trigger: GTACTTAGCAACTTCAAGCCAAGAACTTCCAAAATA...GGTAAATCTCTGTGAATACAAGGCCTGCCTAGTCTGCAGCGCTAGTTCCAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | TTTCTTCTTGGGAATGGGCAGACTTGTATGCACGTGATAGTTATGTaGAAGAAGAAACACGGGCAGCAGAGAATTCTGGTTCCTAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: FLLGNGQTCMHVIVM*KKKHGQQRILVPKT Trigger: TGTTTTAGGAACCAGAATTCTCTGCTGCCCGTGTTTCTTCTTCAACATAACTATCACGTGCATACAAGTCTGCCCATTCCCAAGAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCTGAAGTCTTAAATCATGTCTTTACAGAATGCTTTCTCCCCTACCAGCATCTTTCTTCTTGGGAATaGGCAGACTTGTATGCACGT | + |
|
Preference number: 2 (lower is better) Translates to: RAEVLNHVFTECFLPYQHLSSWE*ADLYAR Trigger: ACGTGCATACAAGTCTGCCCATTCCCAAGAAGAAAG...ATGCTGGTAGGGGAGAAAGCATTCTGTAAAGACATGATTTAAGACTTCAGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR TCA 90 bp | CTAACCTCAAATACAGAAATGGGCTGTTCAGGAACCAAATCCAACAAGTCACAGAGATTTACCTCATTCTaGTTGCTGAGTTGCTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LTSNTEMGCSGTKSNKSQRFTSF*LLSCLD Trigger: ATCCAAGCAACTCAGCAATCAGAATGAGGTAAATCT...CTGTGACTTGTTGGATTTGGTTCCTGAACAGCCCATTTCTGTATTTGAGGTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTCACAGGCTGATCTGGTaGTTAGAAGGGCAAAGTCGA | + |
|
Preference number: 2 (lower is better) Translates to: WQHFSENKSDAQFVVVFSHRLIW*LEGQSR Trigger: TCGACTTTGCCCTTCTAACCACCAGATCAGCCTGTG...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGATTTCCTGGGAAATGTaGCTTAGTGGTAGAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LRQRTHISHFTKVVIRCLISWEM*LSGRTL Trigger: AAGGGTTCTACCACTAAGCCACATTTCCCAGGAAAT...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | CACGGGCAGCAGAGAATTCTGGTTCCTAAAACATTCTTCCCTCTTTaGTTGAATAGGAAATTCCATTCTGTTCCACATGAACTTATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HGQQRILVPKTFFPL*LNRKFHSVPHELMH Trigger: ATGCATAAGTTCATGTGGAACAGAATGGAATTTCCTATTCAACAAAAGAGGGAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCCCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | TCTATACAGTTACTCATAAAGCGCTCTGCACAAACACGGACTTCCTaGTATTTTCCGAGGAGCTCAACAAGATTATCTGCAGTCTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SIQLLIKRSAQTRTS*YFPRSSTRLSAVLK Trigger: TTTTAAGACTGCAGATAATCTTGTTGAGCTCCTCGGAAAATACAAGGAAGTCCGTGTTTGTGCAGAGCGCTTTATGAGTAACTGTATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | GTGACCTCTCCATCTCTGGCTATGGTTTTAAAAATAGCTTATTGGTaGACATCTGCTGGTCAAGGTGCTGATAAACTAGTACTAACAATG | + |
|
Preference number: 2 (lower is better) Translates to: VTSPSLAMVLKIAYW*TSAGQGADKLVLTM Trigger: CATTGTTAGTACTAGTTTATCAGCACCTTGACCAGCAGATGTCAACCAATAAGCTATTTTTAAAACCATAGCCAGAGATGGAGAGGTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR TCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTGATTACCCAACCTTTTaGAGACCAGGCTTGGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: WQHFSENKSDAQFVVVFSDYPTF*RPGLGK Trigger: TTTCCCCAAGCCTGGTCTTCAAAAGGTTGGGTAATC...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR TCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTCAAGATTCCTGGCTCTaGGAGGTACTGGTCATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: WQHFSENKSDAQFVVVFSQDSWL*EVLVIN Trigger: ATTGATGACCAGTACCTCTCAGAGCCAGGAATCTTG...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | AATGCTTTCTCCCCTACCAGCATACATCTAGCATACAGTTTATATCAGATTGTCGGCAGCAGAGAATTCTaGTTCCTAAAACATTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NAFSPTSIHLAYSLYQIVGSREF*FLKHSS Trigger: GGAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCC...GACAATCTGATATAAACTGTATGCTAGATGTATGCTGGTAGGGGAGAAAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | GTTGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTaGTTTTCTCTCTCTGAGTTAGTACATGATTGCTGCTCAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: VGSISLKTNQMHNLL*FSLSELVHDCCSAH Trigger: ATGTGCTGAGCAGCAATCATGTACTAACTCAGAGAGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTAATAGGCAAGAACGATaGTTGGTGATGGAAATCGCC | + |
|
Preference number: 2 (lower is better) Translates to: WQHFSENKSDAQFVVVFSNRQER*LVMEIA Trigger: GGCGATTTCCATCACCAAGCATCGTTCTTGCCTATT...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCTATACAGTTACTCATAAAGCGCTCTGCACAAACACGGACTTCCTTGTATATGTGGCACATCATATaGAGAGGCTATTTTTCATAT | + |
|
Preference number: 2 (lower is better) Translates to: LSIQLLIKRSAQTRTSLYMWHII*RGYFSY Trigger: ATATGAAAAATAGCCTCTCCATATGATGTGCCACAT...ATACAAGGAAGTCCGTGTTTGTGCAGAGCGCTTTATGAGTAACTGTATAGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | GATGTAGGATGTAGTGTAGGAGTTAAGTTGGAAGAAACAATGGGATaGTTAGCAAAGATGTTAGTGTGGATCCAGCAAGTACCATTTATT | + |
|
Preference number: 2 (lower is better) Translates to: DVGCSVGVKLEETMG*LAKMLVWIQQVPFI Trigger: AATAAATGGTACTTGCTGGATCCACACTAACATCTTTGCTAACAATCCCATTGTTTCTTCCAACTTAACTCCTACACTACATCCTACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 90 bp | TGGGCTGTTCAGGAACCAAATCCAACAAGTCACAGAGAATCTTTGTaGAAGATGCATATAAGTACGAACTGGATATTCTATTTGCAAATT | + |
|
Preference number: 2 (lower is better) Translates to: WAVQEPNPTSHRESL*KMHISTNWIFYLQI Trigger: AATTTGCAAATAGAATATCCAGTTCGTACTTATATGCATCTTCAACAAAGATTCTCTGTGACTTGTTGGATTTGGTTCCTGAACAGCCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTGAGTTAGTACATGATTaGTGCTCAGCACATACTATT | + |
|
Preference number: 2 (lower is better) Translates to: WQHFSENKSDAQFVVVFSELVHD*CSAHTI Trigger: AATAGTATGTGCTGAGCAGCAATCATGTACTAACTC...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | CTGTCCCTTTGCACTCTGTCTAGACCACTTCCATGCTaGGTACACGCCCCACCCTCCAGCACTGAGGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLCTLSRPLPC*VHAPPSSTEGL Trigger: GAGCCCCTCAGTGCTGGAGGGTGGGGCGTGTACGCAGCATGGAAGTGGTCTAGACAGAGTGCAAAGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | AGTCTGTCCCTTTGCACTCTGTCTAGACCACTTCCATaGTGCGTACACGCCCCACCCTCCAGCACTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSLCTLSRPLP*CVHAPPSSTEG Trigger: CCCCTCAGTGCTGGAGGGTGGGGCGTGTACGCAGCATGGAAGTGGTCTAGACAGAGTGCAAAGGGACAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | GTGCTTCCCGTCTGTCTCCCCTGTGGACATGGTAGATaGGAACCCGCAATTGTGGGCGCTGGATATGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: VLPVCLPCGHGR*EPAIVGAGYGT Trigger: AGTACCATATCCAGCGCCCACAATTGCGGGTTCCCATCTACCATGTCCACAGGGGAGACAGACGGGAAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | GCCACTTCATGGGCCGACAGCTGCAGCCCTCTGGGATaGGTGAAGCAGCCACACTGTCTATACAGTTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: ATSWADSCSPLG*VKQPHCLYSYS Trigger: TGAGTAACTGTATAGACAGTGTGGCTGCTTCACTCATCCCAGAGGGCTGCAGCTGTCGGCCCATGAAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | CACTCCAAACAAAACAAAGCAGATCTCACGAGGCACTaGAGCCACTTCATGGGCCGACAGCTGCAGCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HSKQNKADLTRH*SHFMGRQLQPS Trigger: AGAGGGCTGCAGCTGTCGGCCCATGAAGTGGCTGCAGTGCCTCGTGAGATCTGCTTTGTTTTGTTTGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | TCGCCCCATCAGATGACCAGCCACAGGCTGATCTGGTaGTTAGAAGGGCAAAGTCGACTGGCAGACTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPHQMTSHRLIW*LEGQSRLADFP Trigger: TGGAAAGTCTGCCAGTCGACTTTGCCCTTCTAACCACCAGATCAGCCTGTGGCTGGTCATCTGATGGGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | TCCCCTGTGGACATGGTAGATGGGAACCCGCAATTGTaGGCGCTGGATATGGTACTCAGCCTGCCAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPVDMVDGNPQL*ALDMVLSLPGK Trigger: TTTTCCTGGCAGGCTGAGTACCATATCCAGCGCCCACAATTGCGGGTTCCCATCTACCATGTCCACAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | CTGAACCCTGAACTGTTTCCAACTAAAGCTAGATGCTaGGGTCTGCAAGAGGCAGGAGGTGGGTGTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LNPELFPTKARC*GLQEAGGGCAV Trigger: CACTGCACACCCACCTCCTGCCTCTTGCAGACCTCAGCATCTAGCTTTAGTTGGAAACAGTTCAGGGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | GGAGTGGAGACTTGTCCTCAGACCAAGAAGTACGGGTaGCCTTTTAGGGTGAGGCTTGGTAGATGGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GVETCPQTKKYG*PFRVRLGRWLE Trigger: CTCTAGCCATCTACCAAGCCTCACCCTAAAAGGTCACCCGTACTTCTTGGTCTGAGGACAAGTCTCCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | AAATCGCCCCATCAGATGACCAGCCACAGGCTGATCTaGTGGTTAGAAGGGCAAAGTCGACTGGCAGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: KSPHQMTSHRLI*WLEGQSRLADF Trigger: AAAGTCTGCCAGTCGACTTTGCCCTTCTAACCACCAGATCAGCCTGTGGCTGGTCATCTGATGGGGCGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGCATTTACTCCATCCCTCAGAAATGAACGGTGCTGGACAGGGAAAGTGCAGGCAAGAACGATGCTaGGTGATGGAAATCGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MLHLLHPSEMNGAGQGKCRQERC*VMEIAP Trigger: TGGGGCGATTTCCATCACCAAGCATCGTTCTTGCCT...GCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGTCCCTAATAGTTGCATaGCCAGCTAGGGAGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KHNVLGMVRTEDASPIAWSLIVA*PARELR Trigger: CCTGAGCTCCCTAGCTGGCAATGCAACTATTAGGGA...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | TCCCAAGCTGCAGCAGCAAATTCTTTCCATCATGCCTaGCCACCAAAAGGGCAGAATTCAGGGTCTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQAAAANSFHHA*PPKGQNSGSLL Trigger: GAGGAGAGACCCTGAATTCTGCCCTTTTGGTGGTCAGGCATGATGGAAAGAATTTGCTGCTGCAGCTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | CTTAACTGTAAAAAGCTTCGCTGTGACAGCAGCTGCTaGGGACTGAACAGGCGCTACACAAGGGAATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LNCKKLRCDSSC*GLNRRYTRECC Trigger: GCAGCATTCCCTTGTGTAGCGCCTGTTCAGTCCTCAGCAGCTGCTGTCACAGCGAAGCTTTTTACAGTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | GCTGTAGAAGCAAAGGGTCGGAAGAGCAGCCAGCAATaGGAATACCATAAATTCTGCTACTGGGACACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AVEAKGRKSSQQ*EYHKFCYWDTG Trigger: GCCTGTGTCCCAGTAGCAGAATTTATGGTATTCCCATTGCTGGCTGCTCTTCCGACCCTTTGCTTCTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | CCAACCTTTGGCAGTTACAGACAAGAGGAATGTATATaGGTTGCCATAGGTGCGGGTGGTGAAACAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PTFGSYRQEECI*VAIGAGGETGA Trigger: GGCTCCTGTTTCACCACCCGCACCTATGGCAACCCATATACATTCCTCTTGTCTGTAACTGCCAAAGGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | AAAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATaGAAGTCCCATAGCATGGAGTGTCCAGCTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: KAQCLGDGEDRR*KSHSMECPADT Trigger: TGTGTCAGCTGGACACTCCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | TTTCAAACAGGAAGCATTTCCTCCCCTCTCCCTTACTaGAGTGGAGACTTGTCCTCAGACCAAGAAGTACGG | + |
|
Preference number: 3 (lower is better) Translates to: FQTGSISSPLPY*SGDLSSDQEVR Trigger: CCGTACTTCTTGGTCTGAGGACAAGTCTCCACTCCAGTAAGGGAGAGGGGAGGAAATGCTTCCTGTTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGCAACCCTCTCCTCAATaGCTGGACCCAATGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KHNVLGMVRTEDASPIAWQPSPQ*LDPMRK Trigger: TTTTCTCATTGGGTCCAGCAATTGAGGAGAGGGTTG...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | ACAAGGGAATGCTGCATTTACTCCATCCCTCAGAAATaGACGGTGCTGGACAGGGAAAGTGCTCCACAACAT | + |
|
Preference number: 3 (lower is better) Translates to: TRECCIYSIPQK*TVLDRESAPQH Trigger: ATGTTGTGGAGCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCATTCCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | AGCTGGGCAGTCTCTTCAGATGAGTATCTGTGCATGTaGCAAAGCTGTGGCCAACTCACTTTGAAGGCATAC | + |
|
Preference number: 3 (lower is better) Translates to: SWAVSSDEYLCM*QSCGQLTLKAY Trigger: GTATGCCTTCAAAGTGAGTTGGCCACAGCTTTGTCACATGCACAGATACTCATCTGAAGAGACTGCCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | TCGACTGGCAGACTTTCCATAGCAATTTTCCCAAGCTaGAGCAGCAAATTCTTTCCATCATGCCTGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: STGRLSIAIFPS*SSKFFPSCLTT Trigger: GGTGGTCAGGCATGATGGAAAGAATTTGCTGCTGCAGCTTGGGAAAATTGCTATGGAAAGTCTGCCAGTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGCATTTACTCCATCCCTCAGAAATGAACGGTGCTGGACAGGGAAAGTGCTGGGAATGGGCAGACTaGTATGCACGTGATAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: MLHLLHPSEMNGAGQGKCWEWAD*YARDSY Trigger: ATAACTATCACGTGCATACAAGTCTGCCCATTCCCA...GCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | ATTTTCCCAAGCTGCAGCAGCAAATTCTTTCCATCATaGCTGACCACCAAAAGGGCAGAATTCAGGGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: IFPSCSSKFFPS*LTTKRAEFRVS Trigger: AGAGACCCTGAATTCTGCCCTTTTGGTGGTCAGGCATGATGGAAAGAATTTGCTGCTGCAGCTTGGGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | GATCAGTTAGTTTCTGACTATCTTAGGAGAGACAAGTaGTGTAGAAGCAAAGGGTCGGAAGAGCAGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DQLVSDYLRRDK*CRSKGSEEQPA Trigger: TGCTGGCTGCTCTTCCGACCCTTTGCTTCTACAGCACTTGTCTCTCCTAAGATAGTCAGAAACTAACTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | CGAAGCCCAAGGTTTATGTGTCACCCTGCCTTATTTTaGTCCATTTTCCTCCATTTACGCCTAGTCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RSPRFMCHPALF*SIFLHLRLVCE Trigger: CTCACAGACTAGGCGTAAATGGAGGAAAATGGACCAAAATAAGGCAGGGTGACACATAAACCTTGGGCTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGAGTGTAGGAGTTAAGTaGGAAGAAACAATGGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: KHNVLGMVRTEDASPIAWSVGVK*EETMGL Trigger: CAATCCCATTGTTTCTTCCAACTTAACTCCTACACT...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | AAGTCCCATAGCATGGAGTGTCCAGCTGACACACACTaGCCAGGTCTCTCACTATTCTATTGTCCCTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: KSHSMECPADTH*PGLSLFYCPFI Trigger: TATAAAGGGACAATAGAATAGTGAGAGACCTGGTCAGTGTGTGTCAGCTGGACACTCCATGCTATGGGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | AGAGGAATGTATATGGGTTGCCATAGGTGCGGGTGGTaGAACAGGAGCCATAGGAATTCACTGCATTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGMYMGCHRCGW*NRSHRNSLHFK Trigger: TTTGAAATGCAGTGAATTCCTATGGCTCCTGTTTCACCACCCGCACCTATGGCAACCCATATACATTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | ACCCGCAATTGTGGGCGCTGGATATGGTACTCAGCCTaGCAGGAAAAGCAAATCATTTGCACAAAATGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TRNCGRWIWYSA*QEKQIICTKCF Trigger: AAAACATTTTGTGCAAATGATTTGCTTTTCCTGGCAGGCTGAGTACCATATCCAGCGCCCACAATTGCGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | AGACTGAGTTATTCATACAAGGGGCAGCTGAAATCGTaGAGACTGAGACAAAGGACGCACATCTCTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLSYSYKGQLKS*RLRQRTHISHF Trigger: AAAGTGAGAGATGTGCGTCCTTTGTCTCAGTCTCCACGATTTCAGCTGCCCCTTGTATGAATAACTCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTGTTCAGGAACCAAATCCAACAAGTCACAGAGAATCTTTGTTGAAGATGCTCTCCTCTTTCTTCTaGGGAATGGGCAGACTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WAVQEPNPTSHRESLLKMLSSFF*GMGRLV Trigger: TACAAGTCTGCCCATTCCCAAGAAGAAAGAGGAGAG...CATCTTCAACAAAGATTCTCTGTGACTTGTTGGATTTGGTTCCTGAACAGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGGAGCCACGTAAGTATTaGGTGACTGGAAGAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRQRTHISHFTKVVIRCLEPRKY*VTGRAE Trigger: CTCAGCTCTTCCAGTCACCAAATACTTACGTGGCTC...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | GGAAGAGCTGAGAGGAAGATATGGACTGTATTTTCCTaGGAATTTGCTACATTGAGGAGGAAACAATCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRAERKIWTVFS*EFATLRRKQSP Trigger: GGGGGATTGTTTCCTCCTCAATGTAGCAAATTCTCAGGAAAATACAGTCCATATCTTCCTCTCAGCTCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | TTATGTCCTGGACAAAGGAGCCACGTAAGTATTTGGTaGCTGGAAGAGCTGAGAGGAAGATATGGACTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LCPGQRSHVSIW*LEELRGRYGLY Trigger: ATACAGTCCATATCTTCCTCTCAGCTCTTCCAGTCACCAAATACTTACGTGGCTCCTTTGTCCAGGACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGTTGGAAGTTCTTGGCTaGAAGTTGCTAAGTACATCT | + |
|
Preference number: 3 (lower is better) Translates to: QPSQTHGFNSLKTTVISKLEVLG*KLLSTS Trigger: AGATGTACTTAGCAACTTCAAGCCAAGAACTTCCAA...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGAGATTCGCTAGTATTTaGGAAGTTCTTGGCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QPSQTHGFNSLKTTVISKRFASI*EVLGLK Trigger: CTTCAAGCCAAGAACTTCCAAAATACTAGCGAATCT...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | ATCTGTGCATGTGACAAAGCTGTGGCCAACTCACTTTaGAGGCATACAGTTTTGCCAAACCTACTCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ICACDKAVANSL*RHTVLPNLLLK Trigger: TTTTAGGAGTAGGTTTGGCAAAACTGTATGCCTTCAAAGTGAGTTGGCCACAGCTTTGTCACATGCACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | GACTCCATGAGAACCTTTTCAATGCTTGAGTGGAACTaGAGTGACATAAACCCAACCTTTGGCAGTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: DSMRTFSMLEWN*SDINPTFGSYR Trigger: TCTGTAACTGCCAAAGGTTGGGTTTATGTCACTTCAGTTCCACTCAAGCATTGAAAAGGTTCTCATGGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CCA 72 bp | CTTTTAATTAGGTGTTGTCCACGGTGTTTTATGTCCTaGACAAAGGAGCCACGTAAGTATTTGGTGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLIRCCPRCFMS*TKEPRKYLVTG Trigger: TCCAGTCACCAAATACTTACGTGGCTCCTTTGTCCAGGACATAAAACACCGTGGACAACACCTAATTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGCACGTGATAGTTATGTaGAAGAAGAAACACGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRQRTHISHFTKVVIRCLHVIVM*KKKHGQ Trigger: CTGCCCGTGTTTCTTCTTCAACATAACTATCACGTG...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | CCAAACCAAAGTTGTGTTGTGGAATGGCCAAGGAGATaGCCCAGTGAAAAGTGTTTTCAAATAAAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PNQSCVVEWPRR*PSEKCFQIKGR Trigger: TCTTCCCTTTATTTGAAAACACTTTTCACTGGGTCATCTCCTTGGCCATTCCACAACACAACTTTGGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | GACAGAGCTGAAGTCTTAAATCATGTCTTTACAGAATaGTTTCTCCCCTACCAGCATACATCTAGCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: DRAEVLNHVFTE*FLPYQHTSSIQ Trigger: CTGTATGCTAGATGTATGCTGGTAGGGGAGAAAGCATTCTGTAAAGACATGATTTAAGACTTCAGCTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | CCAAAAACAAAACAAACACACTGGCTGTTGTCCTCATaGACAACTGGTTATATAGCTGCAACTAGTCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: PKTKQTHWLLSS*TTGYIAATSQT Trigger: GGTTTGACTAGTTGCAGCTATATAACCAGTTGTGCATGAGGACAACAGCCAGTGTGTTTGTTTTGTTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | AAGTTGTGTTGTGGAATGGCCAAGGAGATGACCCAGTaGAAAGTGTTTTCAAATAAAGGGAAGAAGAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KLCCGMAKEMTQ*KVFSNKGKKST Trigger: TGTACTCTTCTTCCCTTTATTTGAAAACACTTTTCACTGGGTCATCTCCTTGGCCATTCCACAACACAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGCATCAATCCATCCAGTaGTTTTCTTTACTACTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LRQRTHISHFTKVVIRCLHQSIQ*FSLLLW Trigger: CCATAGTAGTAAAGAAAACAACTGGATGGATTGATG...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | TTCTCATTTCAAGTGAGACATCACCCTATACTAAAATaGGAAAGAAGTCTGTCCCTTTGCACTCTGTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FSFQVRHHPILK*ERSLSLCTLSR Trigger: TCTAGACAGAGTGCAAAGGGACAGACTTCTTTCTCATTTTAGTATAGGGTGATGTCTCACTTGAAATGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | AGCAGACTCTGGCACCAATTCCAACAACAGATACTCTaGGCTACACCTTTAAAGAAAAACATCTTTAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SRLWHQFQQQIL*ATPLKKNIFKQ Trigger: CTGTTTAAAGATGTTTTTCTTTAAAGGTGTAGCTCAGAGTATCTGTTGTTGGAATTGGTGCCAGAGTCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | GTCTATTTAATAGAATTGAAGAGACACGATGAATGGTaGAGTCCATCCCCTGATCAGTTAGTTTCTGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: VYLIELKRHDEW*SPSPDQLVSDY Trigger: ATAGTCAGAAACTAACTGATCAGGGGATGGACTTCACCATTCATCGTGTCTCTTCAATTCTATTAAATAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR TCA 72 bp | GCAAAGTGTTACCATAACTACTTAACTTCATGCGACTaGCTTAAGCTTAGGATTCTGAAATCTATTAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AKCYHNYLTSCD*LKLRILKSIKQ Trigger: CTGCTTAATAGATTTCAGAATCCTAAGCTTAAGTCAGTCGCATGAAGTTAAGTAGTTATGGTAACACTTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR GCA 72 bp | TTGTTGTTGTTTTCTCTCTCTGAGTTAGTACATGATTaGTGCTCAGCACATACTATTTCAAAACTAAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: LLLFSLSELVHD*CSAHTISKLNY Trigger: GTAGTTTAGTTTTGAAATAGTATGTGCTGAGCAGCAATCATGTACTAACTCAGAGAGAGAAAACAACAACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 72 bp | GTCTCCCCTGTGGACATGGTAGATGGGAACCCGCAATaGTGGGCGCTGGATATGGTACTCAGCCTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPVDMVDGNPQ*WALDMVLSLPG Trigger: TCCTGGCAGGCTGAGTACCATATCCAGCGCCCACAATTGCGGGTTCCCATCTACCATGTCCACAGGGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 72 bp | TGCTCTCCTGCAACTCCAATGTCCCTAATAGTTGCATaGCCAGCTAGGGAGCTCAGGGACCGATTACCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSPATPMSLIVA*PARELRDRLPN Trigger: GTTGGGTAATCGGTCCCTGAGCTCCCTAGCTGGCAATGCAACTATTAGGGACATTGGAGTTGCAGGAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGCTGGGAGTCCGGGATTaGTATTTCCGAAGACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KHNVLGMVRTEDASPIAWLGVRD*YFRRQR Trigger: GCGCTGTCTTCGGAAATACCAATCCCGGACTCCCAG...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR TCA 90 bp | GCTAGGGAGCTCAGGGACCGATTACCCAACCTTTTGAAGACCAGGCTTGGGGAAGCATCTGTGGGAGTTTaGAAAACCAGGGATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARELRDRLPNLLKTRLGEASVGV*KTRDSK Trigger: TTTGGAATCCCTGGTTTTTCAAACTCCCACAGATGC...TTCCCCAAGCCTGGTCTTCAAAAGGTTGGGTAATCGGTCCCTGAGCTCCCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCATTTACTCCATCCCTCAGAAATGAACGGTGCTGGACAGGGAAAGTGCCTTGGGGTTGTTCCGTaGTGCATCTGTGGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MLHLLHPSEMNGAGQGKCLGVVP*CICGSL Trigger: CAAACTCCCACAGATGCATCACGGAACAACCCCAAG...GCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCATTTACTCCATCCCTCAGAAATGAACGGTGCTGGACAGGGAAAGTGCGGAAGAGGATCCAGATaGAAGGGCAGTCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLHLLHPSEMNGAGQGKCGRGSR*KGSLWE Trigger: TTCCCAGAGACTGCCCTTCCATCTGGATCCTCTTCC...GCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCATTTACTCCATCCCTCAGAAATGAACGGTGCTGGACAGGGAAAGTGCAGACAGCGCATCAGTTaGTTCAAGGGGGCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MLHLLHPSEMNGAGQGKCRQRIS*FKGAPS Trigger: TGATGGAGCCCCCTTGAACCAACTGATGCGCTGTCT...GCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR TCA 90 bp | GCTAGGGAGCTCAGGGACCGATTACCCAACCTTTTGAAGACCAGGCTTGGGGAACATGTCGAGTTTTCCTaGGCACTCCTACTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARELRDRLPNLLKTRLGEHVEFS*ALLLHF Trigger: AAAATGAAGTAGGAGTGCTCAGGAAAACTCGACATG...TTCCCCAAGCCTGGTCTTCAAAAGGTTGGGTAATCGGTCCCTGAGCTCCCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR GCA 90 bp | ATCCTGGAACTAGCGCTGCAGACTAGGCAGGCCTTGTATTCACAGAGATTTACCTGTAACACCACATCTTaGGGGTACCACTGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILELALQTRQALYSQRFTCNTTS*GYHCPL Trigger: CAGAGGACAGTGGTACCCGCAAGATGTGGTGTTACA...GGTAAATCTCTGTGAATACAAGGCCTGCCTAGTCTGCAGCGCTAGTTCCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGGGAGGCCTCCTCCTGTaGTACTGGGTGATGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPSQTHGFNSLKTTVISKGGLLL*YWVMLK Trigger: TTTGAGCATCACCCAGTACCACAGGAGGAGGCCTCC...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGTTCAGGAACCAAATCCAACAAGTCACAGAGAATCTTTGTTGAAGATGCTGTGGTTGACCCTCTaGACACTGGGCCAGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WAVQEPNPTSHRESLLKMLWLTL*TLGQAQ Trigger: TTGAGCCTGGCCCAGTGTTCAGAGGGTCAACCACAG...CATCTTCAACAAAGATTCTCTGTGACTTGTTGGATTTGGTTCCTGAACAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | ACTTGTATGCACGTGATAGTTATGTTGAAGAAGAAACACGGGCAGCAGAGAATTATACCTCTTCAGGAATaGCCGGGTCCGCAGCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCMHVIVMLKKKHGQQRIIPLQE*PGPQPK Trigger: CTTCGGCTGCGGACCCGGCCATTCCTGAAGAGGTAT...AATTCTCTGCTGCCCGTGTTTCTTCTTCAACATAACTATCACGTGCATACAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCATTTACTCCATCCCTCAGAAATGAACGGTGCTGGACAGGGAAAGTGCTCACCACGAAACCCCTaGTCTCTAATCAAATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLHLLHPSEMNGAGQGKCSPRNP*SLIKSL Trigger: AAGGGATTTGATTAGAGACCAGGGGTTTCGTGGTGA...GCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR TCA 90 bp | ATGCTGCATTTACTCCATCCCTCAGAAATGAACGGTGCTGGACAGGGAAAGTGCATTCAAGGAAGGTTCTaGTGCACTGCGGTGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLHLLHPSEMNGAGQGKCIQGRF*CTAVNF Trigger: AAAATTCACCGCAGTGCATCAGAACCTTCCTTGAAT...GCACTTTCCCTGTCCAGCACCGTTCATTTCTGAGGGATGGAGTAAATGCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGTCCGTGATGCATCTGTaGGAGTTTGAAAAACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSQTHGFNSLKTTVISKSVMHL*EFEKPG Trigger: CCCTGGTTTTTCAAACTCCCACAGATGCATCACGGA...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR CCA 90 bp | ACTTGTATGCACGTGATAGTTATGTTGAAGAAGAAACACGGGCAGCAGAGAATTGGACTGGTGAGGATTTaGGGCCCAGTAGAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCMHVIVMLKKKHGQQRIGLVRI*GPVESE Trigger: CTCAGACTCTACTGGGCCCCAAATCCTCACCAGTCC...AATTCTCTGCTGCCCGTGTTTCTTCTTCAACATAACTATCACGTGCATACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| 3UTR CAA 72 bp | CTGCTACTGGGACACAGGCCATCAAATAAGGTGACATaGAAAGCCAAACCAAAGTTGTGTTGTGGAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGHRPSNKVT*KAKPKLCCGMA Trigger: GGCCATTCCACAACACAACTTTGGTTTGGCTTTCAATGTCACCTTATTTGATGGCCTGTGTCCCAGTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTGGACAAGCCTGTGGTTaGCCCTCTGAACACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WQHFSENKSDAQFVVVFSGQACG*PSEHWA Trigger: GGCCCAGTGTTCAGAGGGTCAACCACAGGCTTGTCC...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR GCA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGCGTGTAAGTAATCCATaGCCTGTGCAGTCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LRQRTHISHFTKVVIRCLRVSNP*PVQSAE Trigger: CTCGGCAGACTGCACAGGGCATGGATTACTTACACG...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CCA 90 bp | ACTTGTATGCACGTGATAGTTATGTTGAAGAAGAAACACGGGCAGCAGAGAATTATCCCCCTGCTTGGATaGGTGTTTTCGGAGAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: TCMHVIVMLKKKHGQQRIIPLLG*VFSEKH Trigger: GTGCTTCTCCGAAAACACCCATCCAAGCAGGGGGAT...AATTCTCTGCTGCCCGTGTTTCTTCTTCAACATAACTATCACGTGCATACAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | GGGAATGGGCAGACTTGTATGCACGTGATAGTTATGTaGAAGAAGAAACACGGGCAGCAGAGAATTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: GNGQTCMHVIVM*KKKHGQQRILV Trigger: AACCAGAATTCTCTGCTGCCCGTGTTTCTTCTTCAACATAACTATCACGTGCATACAAGTCTGCCCATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR GCA 90 bp | AGAAGAAACACGGGCAGCAGAGAATTCTGGTTCCTAAAACATTCTTCCCTCTTTGAAGGGCATCTAGCTTaGTGGTGTACTCTTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: RRNTGSREFWFLKHSSLFEGHLA*WCTLHR Trigger: CCTATGAAGAGTACACCAGCAAGCTAGATGCCCTTC...AAAGAGGGAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCCCGTGTTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CCA 90 bp | CTGTCTATACAGTTACTCATAAAGCGCTCTGCACAAACACGGACTTCCTTGTATCTCCTCCTGTGGTACTaGGTGATGCTCAAAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: LSIQLLIKRSAQTRTSLYLLLWY*VMLKEL Trigger: AAGTTCTTTGAGCATCACCCAGTACCACAGGAGGAG...ATACAAGGAAGTCCGTGTTTGTGCAGAGCGCTTTATGAGTAACTGTATAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CCA 90 bp | ACTTGTATGCACGTGATAGTTATGTTGAAGAAGAAACACGGGCAGCAGAGAATTATGGAGGCGAGAATTTaGGGAAAGAGTGGTCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TCMHVIVMLKKKHGQQRIMEARI*GKSGLS Trigger: CGAGAGACCACTCTTTCCCCAAATTCTCGCCTCCAT...AATTCTCTGCTGCCCGTGTTTCTTCTTCAACATAACTATCACGTGCATACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | GTATTCACAGAGATTTACCTCATTCTGATTGCTGAGTaGCTTGGATTAAAGGTGCACACTACCACCACCACC | + |
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Preference number: 4 (lower is better) Translates to: VFTEIYLILIAE*LGLKVHTTTTT Trigger: GGTGGTGGTGGTAGTGTGCACCTTTAATCCAAGCAACTCAGCAATCAGAATGAGGTAAATCTCTGTGAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR TCA 90 bp | AGAAGAAACACGGGCAGCAGAGAATTCTGGTTCCTAAAACATTCTTCCCTCTTTCTCCCAGTCATCACTTaGATCTCTTCTACCAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: RRNTGSREFWFLKHSSLFLPVIT*ISSTKC Trigger: ACACTTGGTAGAAGAGATTCAAGTGATGACTGGGAG...AAAGAGGGAAGAATGTTTTAGGAACCAGAATTCTCTGCTGCCCGTGTTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR TCA 90 bp | CTAACCTCAAATACAGAAATGGGCTGTTCAGGAACCAAATCCAACAAGTCACAGCTCCTACTTCATTTTTaGAGGCCTGTAGCTGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LTSNTEMGCSGTKSNKSQLLLHF*RPVAVE Trigger: CTCAACAGCTACAGGCCTTCAAAAATGAAGTAGGAG...CTGTGACTTGTTGGATTTGGTTCCTGAACAGCCCATTTCTGTATTTGAGGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR GCA 90 bp | AAGCACAATGTCTTGGGGATGGTGAGGACAGAAGATGCAAGTCCCATAGCATGGTACGGGTTTTTATCTTaGATTCTGATTACTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KHNVLGMVRTEDASPIAWYGFLS*ILITSG Trigger: ACCAGAAGTAATCAGAATGCAAGATAAAAACCCGTA...CCATGCTATGGGACTTGCATCTTCTGTCCTCACCATCCCCAAGACATTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CCA 90 bp | ACTTGTATGCACGTGATAGTTATGTTGAAGAAGAAACACGGGCAGCAGAGAATTCAAACACTATTTCACTaGGGACAGAATGGAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TCMHVIVMLKKKHGQQRIQTLFH*GQNGGG Trigger: CCCTCCTCCATTCTGTCCCCAGTGAAATAGTGTTTG...AATTCTCTGCTGCCCGTGTTTCTTCTTCAACATAACTATCACGTGCATACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | AGGGTCTCTCCTCTTTCTTCTTGGGAATGGGCAGACTaGTATGCACGTGATAGTTATGTTGAAGAAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: RVSPLSSWEWAD*YARDSYVEEET Trigger: TGTTTCTTCTTCAACATAACTATCACGTGCATACAAGTCTGCCCATTCCCAAGAAGAAAGAGGAGAGACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | TTACTCATAAAGCGCTCTGCACAAACACGGACTTCCTaGTATTTTCCGAGGAGCTCAACAAGATTATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LLIKRSAQTRTS*YFPRSSTRLSA Trigger: TGCAGATAATCTTGTTGAGCTCCTCGGAAAATACAAGGAAGTCCGTGTTTGTGCAGAGCGCTTTATGAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR TCA 90 bp | CTGAGACAAAGGACGCACATCTCTCACTTTACTAAAGTGGTAATAAGGTGTTTGCTAATCAAATCCCTTTaGTCCTGTAATTCCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LRQRTHISHFTKVVIRCLLIKSL*SCNSTS Trigger: AGAAGTGGAATTACAGGATCAAAGGGATTTGATTAG...CAAACACCTTATTACCACTTTAGTAAAGTGAGAGATGTGCGTCCTTTGTCTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | GTAAAGGCTAAGGAGAACTGTGACGAGGTGATACTTTaGATCTGTGCAAAGATAAGATTTAGGGTTCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: VKAKENCDEVIL*ICAKIRFRVLE Trigger: TTCTAGAACCCTAAATCTTATCTTTGCACAGATCAAAAGTATCACCTCGTCACAGTTCTCCTTAGCCTTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | CCATCTCTGGCTATGGTTTTAAAAATAGCTTATTGGTaGACATCTGCTGGTCAAGGTGCTGATAAACTAGTA | + |
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Preference number: 4 (lower is better) Translates to: PSLAMVLKIAYW*TSAGQGADKLV Trigger: TACTAGTTTATCAGCACCTTGACCAGCAGATGTCAACCAATAAGCTATTTTTAAAACCATAGCCAGAGATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR GCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTTCTGATTACTTCTGGTaGCATCCACAAAATAGATCC | + |
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Preference number: 4 (lower is better) Translates to: WQHFSENKSDAQFVVVFSSDYFW*HPQNRS Trigger: GGATCTATTTTGTGGATGGCACCAGAAGTAATCAGA...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CCA 90 bp | TGGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTTGTTGTTTTCTCTCATTCTGATTACTTCTaGTGCCATCCACAAAATAGA | + |
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Preference number: 4 (lower is better) Translates to: WQHFSENKSDAQFVVVFSHSDYF*CHPQNR Trigger: TCTATTTTGTGGATGGCACCAGAAGTAATCAGAATG...AGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | CAGAGAATTCTGGTTCCTAAAACATTCTTCCCTCTTTaGTTGAATAGGAAATTCCATTCTGTTCCACATGAA | + |
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Preference number: 4 (lower is better) Translates to: QRILVPKTFFPL*LNRKFHSVPHE Trigger: TTCATGTGGAACAGAATGGAATTTCCTATTCAACAAAAGAGGGAAGAATGTTTTAGGAACCAGAATTCTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | GGCAGCATTTCTCTGAAAACAAATCAGATGCACAATTaGTTGTTGTTTTCTCTCTCTGAGTTAGTACATGAT | + |
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Preference number: 4 (lower is better) Translates to: GSISLKTNQMHN*LLFSLSELVHD Trigger: ATCATGTACTAACTCAGAGAGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| 3UTR CAA 72 bp | AGCATTTCTCTGAAAACAAATCAGATGCACAATTTGTaGTTGTTTTCTCTCTCTGAGTTAGTACATGATTGC | + |
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Preference number: 4 (lower is better) Translates to: SISLKTNQMHNL*LFSLSELVHDC Trigger: GCAATCATGTACTAACTCAGAGAGAGAAAACAACAACAAATTGTGCATCTGATTTGTTTTCAGAGAAATGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CAA 90 bp | GCTAGGGAGCTCAGGGACCGATTACCCAACCTTTTGAAGACCAGGCTTGGGGAAAAGACAGCGCATCAGTaGGTTCAAGGGGGCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: ARELRDRLPNLLKTRLGEKTAHQ*VQGGSI Trigger: GATGGAGCCCCCTTGAACCAACTGATGCGCTGTCTT...TTCCCCAAGCCTGGTCTTCAAAAGGTTGGGTAATCGGTCCCTGAGCTCCCTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CAA 90 bp | GCTAGGGAGCTCAGGGACCGATTACCCAACCTTTTGAAGACCAGGCTTGGGGAATGTGGTGACTTGGGGTaGTTCCGTGATGCATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ARELRDRLPNLLKTRLGECGDLG*FRDASV Trigger: CACAGATGCATCACGGAACAACCCCAAGTCACCACA...TTCCCCAAGCCTGGTCTTCAAAAGGTTGGGTAATCGGTCCCTGAGCTCCCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CAA 90 bp | AGAGCTGAAGTCTTAAATCATGTCTTTACAGAATGCTTTCTCCCCTACCAGCATGGCTCCATGTCGCCATaGAACAGAGCCTGGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RAEVLNHVFTECFLPYQHGSMSP*NRAWPC Trigger: GCAGGGCCAGGCTCTGTTCAATGGCGACATGGAGCC...ATGCTGGTAGGGGAGAAAGCATTCTGTAAAGACATGATTTAAGACTTCAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CAA 90 bp | TGGGCTGTTCAGGAACCAAATCCAACAAGTCACAGAGAATCTTTGTTGAAGATGGCTGGGAGTCCGGGATaGGTATTTCCGAAGACAGCG | + |
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Preference number: 5 (lower is better) Translates to: WAVQEPNPTSHRESLLKMAGSPG*VFPKTA Trigger: CGCTGTCTTCGGAAATACCAATCCCGGACTCCCAGC...CATCTTCAACAAAGATTCTCTGTGACTTGTTGGATTTGGTTCCTGAACAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CAA 90 bp | GGGCAGTCTCTTCAGATGAGTATCTGTGCATGTGACAAAGCTGTGGCCAACTCATGCATCTGTGGGAGTTaGAAAAACCAGGGATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: GQSLQMSICACDKAVANSCICGS*KNQGFQ Trigger: TTGGAATCCCTGGTTTTTCAAACTCCCACAGATGCA...TGAGTTGGCCACAGCTTTGTCACATGCACAGATACTCATCTGAAGAGACTGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS-3UTR CAA 90 bp | CAGCCCAGCCAAACACACGGGTTCAACAGTCTTAAAACAACAGTGATTTCCAAGTGTAACAATTGCCAGTaGTGGCTTTGTAGAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: QPSQTHGFNSLKTTVISKCNNCQ*WLCRIA Trigger: GGCTATTCTACAAAGCCACAACTGGCAATTGTTACA...CTTGGAAATCACTGTTGTTTTAAGACTGTTGAACCCGTGTGTTTGGCTGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS TCA 72 bp | CGGCGCCAGCGCCGGCCTCCGGCTCCATGTCGCCATTaGACAGAGCCTGGCCCTGCTCGGCGCCGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RRQRRPPAPCRH*TEPGPARRRRR Trigger: GCGGCGGCGGCGCCGAGCAGGGCCAGGCTCTGTTCAATGGCGACATGGAGCCGGAGGCCGGCGCTGGCGCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS CAA 72 bp | GCGGCGCCAGCGCCGGCCTCCGGCTCCATGTCGCCATaGAACAGAGCCTGGCCCTGCTCGGCGCCGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: AAPAPASGSMSP*NRAWPCSAPPP Trigger: CGGCGGCGGCGCCGAGCAGGGCCAGGCTCTGTTCAATGGCGACATGGAGCCGGAGGCCGGCGCTGGCGCCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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| CDS CCA 72 bp | GTCCGGGATTGGTATTTCCGAAGACAGCGCATCAGTTaGTTCAAGGGGGCTCCATCACCACGAAACCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VRDWYFRRQRIS*FKGAPSPRNPW Trigger: CCAGGGGTTTCGTGGTGATGGAGCCCCCTTGAACCAACTGATGCGCTGTCTTCGGAAATACCAATCCCGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002487.15 |
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