Pregenerated sensors for BPNT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026617Ensembl transcript IDs: ENSMUST00000027916.13, ENSMUST00000110965.2, ENSMUST00000151769.2, ENSMUST00000210277.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCTGTGCCCTGAAGAAATCTGGTTTATCAGCAGGAATGTTGACTaGACAAATGACTTGGACAGTCATTTGAAACTAACCCTTTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: TLCPEEIWFISRNVD*TNDLDSHLKLTLFH Trigger: ATGAAAAAGGGTTAGTTTCAAATGACTGTCCAAGTCATTTGTGCAGTCAACATTCCTGCTGATAAACCAGATTTCTTCAGGGCACAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| 3UTR-3UTR GCA 90 bp | TTTTCATTTCTTCACTTAGAAATAGTAACATTTGAGCCAGGTGTGGTGGGGCAACAGGACAGCTGGGGCTaGACAGAGAAACCCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: FSFLHLEIVTFEPGVVGQQDSWG*TEKPCL Trigger: GAGACAGGGTTTCTCTGTGCAGCCCCAGCTGTCCTG...TTGCCCCACCACACCTGGCTCAAATGTTACTATTTCTAAGTGAAGAAATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| 3UTR-3UTR CCA 90 bp | CAACTGAAATTCTGGAGTAACTTAAGACTCTGTGCCCTGAAGAAATCTGGTTTATTGAGCCAGGTGTGGTaGGGCAAGCCCTTAATCCCT | + |
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Preference number: 2 (lower is better) Translates to: QLKFWSNLRLCALKKSGLLSQVW*GKPLIP Trigger: AGGGATTAAGGGCTTGCCCCACCACACCTGGCTCAA...TAAACCAGATTTCTTCAGGGCACAGAGTCTTAAGTTACTCCAGAATTTCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| 3UTR-3UTR CAA 90 bp | GTGTGGTGGGGCAAGCCCTTAATCCCTGCACTAAGGAGGCAGAGGCAGGGGAATTTAAGATGTGTTCCTTaGAACCAAGGCCTCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: VWWGKPLIPALRRQRQGNLRCVP*NQGLWV Trigger: TACCCAGAGGCCTTGGTTCAAAGGAACACATCTTAA...ATTCCCCTGCCTCTGCCTCCTTAGTGCAGGGATTAAGGGCTTGCCCCACCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| 3UTR TCA 72 bp | ATCCCTGCACTAAGGAGGCAGAGGCAGGGGAATCTCTaGGTGCAAGGCCAACTTTGTCTACAGAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPALRRQRQGNL*VQGQLCLQSEF Trigger: GAACTCACTCTGTAGACAAAGTTGGCCTTGCACTCAGAGATTCCCCTGCCTCTGCCTCCTTAGTGCAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTCACTTAGAAATAGTAACATTTGAGCCAGGTGTGGTGGGGCAAGCCCTTCCACACCTGGCTAATTaGTTTTTAGGCAGGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: FLHLEIVTFEPGVVGQALPHLAN*FLGRRN Trigger: ATTTCTCCTGCCTAAAAACAAATTAGCCAGGTGTGG...AAGGGCTTGCCCCACCACACCTGGCTCAAATGTTACTATTTCTAAGTGAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| 3UTR GCA 72 bp | CCTGAAGAAATCTGGTTTATCAGCAGGAATGTTGACTaGACAAATGACTTGGACAGTCATTTGAAACTAACC | + |
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Preference number: 3 (lower is better) Translates to: PEEIWFISRNVD*TNDLDSHLKLT Trigger: GGTTAGTTTCAAATGACTGTCCAAGTCATTTGTGCAGTCAACATTCCTGCTGATAAACCAGATTTCTTCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| 3UTR-3UTR CAA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATTTAAGATGTGTTCCTTaGAACCAAGGCCTCTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: KSLINDKCRQSSNCSISNLRCVP*NQGLWV Trigger: TACCCAGAGGCCTTGGTTCAAAGGAACACATCTTAA...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | GTGTGGTGGGGCAAGCCCTTAATCCCTGCACTAAGGAGGCAGAGGCAGGGGAATGTGGTTGTGATAATGTaGTTCCCGGCAGGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VWWGKPLIPALRRQRQGNVVVIM*FPAGAS Trigger: GGAAGCCCCTGCCGGGAAGCACATTATCACAACCAC...ATTCCCCTGCCTCTGCCTCCTTAGTGCAGGGATTAAGGGCTTGCCCCACCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR CCA 90 bp | GAGGCTAGGCTCAAGCAATCCTCTGATTCAACCACTGGAGTAGCTATGACTATTCCAAGCGGTCGGCTTTaGTCTGCAGGTCGGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: EARLKQSSDSTTGVAMTIPSGRL*SAGRWP Trigger: CGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGG...AATAGTCATAGCTACTCCAGTGGTTGAATCAGAGGATTGCTTGAGCCTAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR TCA 90 bp | GAGGCTAGGCTCAAGCAATCCTCTGATTCAACCACTGGAGTAGCTATGACTATTGGTCCTCTTCCCCTATaGTGGTCAGCTTCGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: EARLKQSSDSTTGVAMTIGPLPL*WSASGT Trigger: AGTTCCCGAAGCTGACCATCATAGGGGAAGAGGACC...AATAGTCATAGCTACTCCAGTGGTTGAATCAGAGGATTGCTTGAGCCTAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR GCA 90 bp | GAGGCTAGGCTCAAGCAATCCTCTGATTCAACCACTGGAGTAGCTATGACTATTACCTCCTTGTTGTACTaGAGGGCATTCCCATGGATG | + |
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Preference number: 4 (lower is better) Translates to: EARLKQSSDSTTGVAMTITSLLY*RAFPWM Trigger: CATCCATGGGAATGCCCTGCAGTACAACAAGGAGGT...AATAGTCATAGCTACTCCAGTGGTTGAATCAGAGGATTGCTTGAGCCTAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR CCA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCCAAGCGGTCGGCTTTaGTCTGCAGGTCGGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KSLINDKCRQSSNCSISNPSGRL*SAGRWP Trigger: CGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGG...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000210277.2 |
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| CDS-3UTR TCA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGCGGAAATGCAGTCTGTaGCCAGCTGGTTGCTATGGG | + |
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Preference number: 4 (lower is better) Translates to: SLINDKCRQSSNCSISNQRKCSL*PAGCYG Trigger: CCCATAGCAACCAGCTGGTCACAGACTGCATTTCCG...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | AACTTAAGACTCTGTGCCCTGAAGAAATCTGGTTTATCAGCAGGAATGTTGACTGAGCATATGCTCATCTaGACCAAGCGGTCGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NLRLCALKKSGLSAGMLTEHMLI*TKRSAL Trigger: CAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTC...AGTCAACATTCCTGCTGATAAACCAGATTTCTTCAGGGCACAGAGTCTTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR GCA 90 bp | GAAGAAATCTGGTTTATCAGCAGGAATGTTGACTGCACAAATGACTTGGACAGTAGGATCTCCTCCCACTaGCCGTCTTCAATCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEIWFISRNVDCTNDLDSRISSH*PSSISS Trigger: AGAGCTGATTGAAGACGGGCAGTGGGAGGAGATCCT...ACTGTCCAAGTCATTTGTGCAGTCAACATTCCTGCTGATAAACCAGATTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR GCA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCATTGATAGCACTGTACTaGGAGGGGCACGGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TTNKSLINDKCRQSSNCSLIALY*EGHGCF Trigger: GAAGCAGCCGTGCCCCTCGCAGTACAGTGCTATCAA...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAGTGGTTGTGATAATGTaGTTCCCGGCAGGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TTNKSLINDKCRQSSNCSVVVIM*FPAGAS Trigger: GGAAGCCCCTGCCGGGAAGCACATTATCACAACCAC...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR TCA 90 bp | CTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTATGGTCCTCTTCCCCTATaGTGGTCAGCTTCGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LINDKCRQSSNCSISNQYGPLPL*WSASGT Trigger: AGTTCCCGAAGCTGACCATCATAGGGGAAGAGGACC...ATACTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR TCA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTGGTCCTCTTCCCCTATaGTGGTCAGCTTCGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TNKSLINDKCRQSSNCSIGPLPL*WSASGT Trigger: AGTTCCCGAAGCTGACCATCATAGGGGAAGAGGACC...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR TCA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCGGAAATGCAGTCTGTaGCCAGCTGGTTGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLINDKCRQSSNCSISNRKCSL*PAGCYG Trigger: CCCATAGCAACCAGCTGGTCACAGACTGCATTTCCG...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAAGGTCTTCTGCACGATaGCCAGGTCTCCTTCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TTNKSLINDKCRQSSNCSRSSAR*PGLLQQ Trigger: TTGCTGAAGGAGACCTGGGCATCGTGCAGAAGACCT...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | CTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTATTTGATAGCACTGTACTaGGAGGGGCACGGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LINDKCRQSSNCSISNQYLIALY*EGHGCF Trigger: GAAGCAGCCGTGCCCCTCGCAGTACAGTGCTATCAA...ATACTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTGTGGTTGTGATAATGTaGTTCCCGGCAGGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TNKSLINDKCRQSSNCSIVVVIM*FPAGAS Trigger: GGAAGCCCCTGCCGGGAAGCACATTATCACAACCAC...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | CAACTGAAATTCTGGAGTAACTTAAGACTCTGTGCCCTGAAGAAATCTGGTTTAGATAATCTTGTTTCCTaGTCCTCCCACTCGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: QLKFWSNLRLCALKKSGLDNLVS*SSHSQH Trigger: GTGCTGCGAGTGGGAGGAGCAGGAAACAAGATTATC...TAAACCAGATTTCTTCAGGGCACAGAGTCTTAAGTTACTCCAGAATTTCAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR GCA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGGATAATCTTGTTTCCTaGTCCTCCCACTCGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SLINDKCRQSSNCSISNQDNLVS*SSHSQH Trigger: GTGCTGCGAGTGGGAGGAGCAGGAAACAAGATTATC...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | AACCCTTTTTCATTTCTTCACTTAGAAATAGTAACATTTGAGCCAGGTGTGGTGTTCCCTCCCACAGCATaGAAGATAACTTCCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NPFSFLHLEIVTFEPGVVFPPTA*KITSGA Trigger: TGCCCCGGAAGTTATCTTGCATGCTGTGGGAGGGAA...CACCACACCTGGCTCAAATGTTACTATTTCTAAGTGAAGAAATGAAAAAGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR GCA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCATTCCCTCCCACAGCATaGAAGATAACTTCCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TTNKSLINDKCRQSSNCSFPPTA*KITSGA Trigger: TGCCCCGGAAGTTATCTTGCATGCTGTGGGAGGGAA...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR TCA 90 bp | GTTCAATTAGTAATCAGTATTAAGATGTGTTCCTTTGAACCAAGGCCTCTGGGTAGCGATAGAATATGCTaGAGCTACCAGCCGCATCAA | + |
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Preference number: 4 (lower is better) Translates to: VQLVISIKMCSFEPRPLGSDRIC*SYQPHQ Trigger: TTGATGCGGCTGGTAGCTTCAGCATATTCTATCGCT...ACCCAGAGGCCTTGGTTCAAAGGAACACATCTTAATACTGATTACTAATTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | CTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTATAGGTCTTCTGCACGATaGCCAGGTCTCCTTCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LINDKCRQSSNCSISNQYRSSAR*PGLLQQ Trigger: TTGCTGAAGGAGACCTGGGCATCGTGCAGAAGACCT...ATACTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTGAGCATATGCTCATCTaGACCAAGCGGTCGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: TNKSLINDKCRQSSNCSIEHMLI*TKRSAL Trigger: CAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTC...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAGATAATCTTGTTTCCTaGTCCTCCCACTCGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: TTNKSLINDKCRQSSNCSDNLVS*SSHSQH Trigger: GTGCTGCGAGTGGGAGGAGCAGGAAACAAGATTATC...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | GAAGAAATCTGGTTTATCAGCAGGAATGTTGACTGCACAAATGACTTGGACAGTCTTACACCCAGGACTTaGAAACACATAAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EEIWFISRNVDCTNDLDSLTPRT*KHISRS Trigger: GCTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAG...ACTGTCCAAGTCATTTGTGCAGTCAACATTCCTGCTGATAAACCAGATTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR GCA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTTTCCCTCCCACAGCATaGAAGATAACTTCCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TNKSLINDKCRQSSNCSIFPPTA*KITSGA Trigger: TGCCCCGGAAGTTATCTTGCATGCTGTGGGAGGGAA...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR CCA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGACCAGCTGGTTGCTATaGGATCTGGTGGTTGTGATA | + |
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Preference number: 4 (lower is better) Translates to: SLINDKCRQSSNCSISNQTSWLL*DLVVVI Trigger: TATCACAACCACCAGATCCCATAGCAACCAGCTGGT...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR CCA 90 bp | GTTCAATTAGTAATCAGTATTAAGATGTGTTCCTTTGAACCAAGGCCTCTGGGTACCAGCTGGTTGCTATaGGATCTGGTGGTTGTGATA | + |
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Preference number: 4 (lower is better) Translates to: VQLVISIKMCSFEPRPLGTSWLL*DLVVVI Trigger: TATCACAACCACCAGATCCCATAGCAACCAGCTGGT...ACCCAGAGGCCTTGGTTCAAAGGAACACATCTTAATACTGATTACTAATTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | CTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTATACCTCCTTGTTGTACTaGAGGGCATTCCCATGGATG | + |
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Preference number: 4 (lower is better) Translates to: LINDKCRQSSNCSISNQYTSLLY*RAFPWM Trigger: CATCCATGGGAATGCCCTGCAGTACAACAAGGAGGT...ATACTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATACCTCCTTGTTGTACTaGAGGGCATTCCCATGGATG | + |
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Preference number: 4 (lower is better) Translates to: KSLINDKCRQSSNCSISNTSLLY*RAFPWM Trigger: CATCCATGGGAATGCCCTGCAGTACAACAAGGAGGT...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCACTTACACCCAGGACTTaGAAACACATAAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TTNKSLINDKCRQSSNCSLTPRT*KHISRS Trigger: GCTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAG...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR CCA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATACCAGCTGGTTGCTATaGGATCTGGTGGTTGTGATA | + |
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Preference number: 4 (lower is better) Translates to: KSLINDKCRQSSNCSISNTSWLL*DLVVVI Trigger: TATCACAACCACCAGATCCCATAGCAACCAGCTGGT...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS-3UTR GCA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCTTACACCCAGGACTTaGAAACACATAAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: KSLINDKCRQSSNCSISNLTPRT*KHISRS Trigger: GCTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAG...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| 3UTR CAA 72 bp | TGGTTTATCAGCAGGAATGTTGACTGCACAAATGACTaGGACAGTCATTTGAAACTAACCCTTTTTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: WFISRNVDCTND*DSHLKLTLFHF Trigger: GAAATGAAAAAGGGTTAGTTTCAAATGACTGTCCAAGTCATTTGTGCAGTCAACATTCCTGCTGATAAACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
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| CDS-3UTR TCA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCATAAGCAATCCCAATaGGAACTGTTACATTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: KSLINDKCRQSSNCSISNHKQSQ*ELLHCQ Trigger: TTGACAATGTAACAGTTCTCATTGGGATTGCTTATG...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS GCA 90 bp | GCTGAAACCCAAAAGCACCCAAACCCAGAACTCCCCAGATGGTCCTaGCCAGCGCCGCGTCGGGTCCTGCCTGGGCTTCATTCCCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AETQKHPNPELPRWS*PAPRRVLPGLHSRA Trigger: AGCACGGGAATGAAGCCCAGGCAGGACCCGACGCGGCGCTGGGCAGGACCATCTGGGGAGTTCTGGGTTTGGGTGCTTTTGGGTTTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210277.2 |
||
| CDS GCA 90 bp | GTCAGCTTCGGGAACTTCCGGGCCAGGGAAGAGCATATGCTCATCTaGACCAAGCGGTCGGCTTTGGTCTGCAGGTCGGTGGCCGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSFGNFRAREEHMLI*TKRSALVCRSVAEV Trigger: GACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTTCCCTGGCCCGGAAGTTCCCGAAGCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
||
| CDS CCA 90 bp | GGGCCAGGGAAGAGCATATGCTCATCTGCACCAAGCGGTCGGCTTTaGTCTGCAGGTCGGTGGCCGAGGTCTTCTGCACGATGCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPGKSICSSAPSGRL*SAGRWPRSSARCPG Trigger: ACCTGGGCATCGTGCAGAAGACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTTCCCTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
||
| CDS GCA 90 bp | AGGGAAGAGCATATGCTCATCTGCACCAAGCGGTCGGCTTTGGTCTaGAGGTCGGTGGCCGAGGTCTTCTGCACGATGCCCAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: REEHMLICTKRSALV*RSVAEVFCTMPRSP Trigger: AGGAGACCTGGGCATCGTGCAGAAGACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
||
| CDS GCA 90 bp | GCTGAAACCCAAAAGCACCCAAACCCAGAACTCCCCAGATGGTCCTaGCCAGCGCCGCGTCGGGTCCTGCCTGGTAGTTGTAATACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AETQKHPNPELPRWS*PAPRRVLPGSCNTA Trigger: AGCCGTATTACAACTACCAGGCAGGACCCGACGCGGCGCTGGGCAGGACCATCTGGGGAGTTCTGGGTTTGGGTGCTTTTGGGTTTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 |
||
| CDS GCA 90 bp | GGGTCAACCCAAACCACAAGGTCTTCCTCCTTGATAGCACTGTACTaGGAGGGGCACGGCTGCTTCAGGATCTCCTCCCACTGCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSTQTTRSSSLIALY*EGHGCFRISSHCPS Trigger: AGACGGGCAGTGGGAGGAGATCCTGAAGCAGCCGTGCCCCTCGCAGTACAGTGCTATCAAGGAGGAAGACCTTGTGGTTTGGGTTGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS TCA 90 bp | GGCTGCTTCAGGATCTCCTCCCACTGCCCGTCTTCAATCAGCTCTTaGTCCACTTCCCCAGGAGGCAGGTCCTCTTCCCCTATGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GCFRISSHCPSSISS*STSPGGRSSSPMMV Trigger: GACCATCATAGGGGAAGAGGACCTGCCTCCTGGGGAAGTGGATCAAGAGCTGATTGAAGACGGGCAGTGGGAGGAGATCCTGAAGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS TCA 90 bp | CCAGCGCCGCGTCGGGTCCTGCCTGGGCTTCATTCCCGTGCTCTCTaGGCTTCTCCTTTTCATTGTTCTGGTAGTTGTAATACGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PAPRRVLPGLHSRAL*ASPFHCSGSCNTAG Trigger: ACCAGCCGTATTACAACTACCAGAACAATGAAAAGGAGAAGCTCAGAGAGCACGGGAATGAAGCCCAGGCAGGACCCGACGCGGCGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210277.2 |
||
| CDS CCA 90 bp | TCGGGGTTCATGGCGGAAATGCAGTCTGTGACCAGCTGGTTGCTATaGGATCTGGTGGTTGTGATAATGTGCTTCCCGGCAGGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGFMAEMQSVTSWLL*DLVVVIMCFPAGAS Trigger: GGAAGCCCCTGCCGGGAAGCACATTATCACAACCACCAGATCCCATAGCAACCAGCTGGTCACAGACTGCATTTCCGCCATGAACCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS CCA 90 bp | AGCACGGTGTCGGGGTTCATGGCGGAAATGCAGTCTGTGACCAGCTaGTTGCTATGGGATCTGGTGGTTGTGATAATGTGCTTCCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STVSGFMAEMQSVTS*LLWDLVVVIMCFPA Trigger: TGCCGGGAAGCACATTATCACAACCACCAGATCCCATAGCAACCAGCTGGTCACAGACTGCATTTCCGCCATGAACCCCGACACCGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS GCA 90 bp | GTCGGGTCCTGCCTGGTAGTTGTAATACGGCTGGTTGATGATGCCTaGGATGGCCTTTCCTTCATAAGCAATCCCAATGAGAACTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VGSCLVVVIRLVDDA*DGLSFISNPNENCY Trigger: GTAACAGTTCTCATTGGGATTGCTTATGAAGGAAAGGCCATCGCAGGCATCATCAACCAGCCGTATTACAACTACCAGGCAGGACCCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 |
||
| CDS-3UTR CAA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGACCAAGCGGTCGGCTTaGGTCTGCAGGTCGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLINDKCRQSSNCSISNQTKRSA*VCRSVA Trigger: GGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGT...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000210277.2 |
||
| CDS GCA 90 bp | GATAACTTCCGGGGCACAAGTGTCCCACTTCTTACACCCAGGACTTaGAAACACATAAGCAGAAGCTTTGCCTTCGATCAGCTGGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: DNFRGTSVPLLTPRT*KHISRSFAFDQLDN Trigger: ATTATCCAGCTGATCGAAGGCAAAGCTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAGAAGTGGGACACTTGTGCCCCGGAAGTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS CCA 90 bp | GAGTTCATATGTTTCACCTCCTTGTTGTACTGCAGGGCATTCCCATaGATGTCTGTCAACTTCCCTCCCACAGCATGCAAGATAACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EFICFTSLLYCRAFP*MSVNFPPTACKITS Trigger: GGAAGTTATCTTGCATGCTGTGGGAGGGAAGTTGACAGACATCCATGGGAATGCCCTGCAGTACAACAAGGAGGTGAAACATATGAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | CTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTATACCAAGCGGTCGGCTTaGGTCTGCAGGTCGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LINDKCRQSSNCSISNQYTKRSA*VCRSVA Trigger: GGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGT...ATACTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAATTAGTAATCAGTATTAAGATGTGTTCCTTTGAACCAAGGCCTCTGGGTGTCTTCAATCAGCTCTaGATCCACTTCCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VQLVISIKMCSFEPRPLGVFNQL*IHFPRR Trigger: CCTCCTGGGGAAGTGGATCAAGAGCTGATTGAAGAC...ACCCAGAGGCCTTGGTTCAAAGGAACACATCTTAATACTGATTACTAATTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAATTAGTAATCAGTATTAAGATGTGTTCCTTTGAACCAAGGCCTCTGGGTTCTGTGACCAGCTGGTaGCTATGGGATCTGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VQLVISIKMCSFEPRPLGSVTSW*LWDLVV Trigger: AACCACCAGATCCCATAGCAACCAGCTGGTCACAGA...ACCCAGAGGCCTTGGTTCAAAGGAACACATCTTAATACTGATTACTAATTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTCTGTGACCAGCTGGTaGCTATGGGATCTGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLINDKCRQSSNCSISNQSVTSW*LWDLVV Trigger: AACCACCAGATCCCATAGCAACCAGCTGGTCACAGA...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS GCA 90 bp | CTTTTCATTGTTCTGGTAGTTGTAATACGGCTGGTTGATGATGCCTaGGATGGCCTTTCCTTCATAAGCAATCCCAATGAGAACTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LFIVLVVVIRLVDDA*DGLSFISNPNENCY Trigger: GTAACAGTTCTCATTGGGATTGCTTATGAAGGAAAGGCCATCGCAGGCATCATCAACCAGCCGTATTACAACTACCAGAACAATGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAGTCTTCAATCAGCTCTaGATCCACTTCCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTNKSLINDKCRQSSNCSVFNQL*IHFPRR Trigger: CCTCCTGGGGAAGTGGATCAAGAGCTGATTGAAGAC...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTGTCTTCAATCAGCTCTaGATCCACTTCCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNKSLINDKCRQSSNCSIVFNQL*IHFPRR Trigger: CCTCCTGGGGAAGTGGATCAAGAGCTGATTGAAGAC...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | AACCCTTTTTCATTTCTTCACTTAGAAATAGTAACATTTGAGCCAGGTGTGGTGACAAGGTCTTCCTCCTaGATAGCACTGTACTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NPFSFLHLEIVTFEPGVVTRSSS*IALYCE Trigger: CTCGCAGTACAGTGCTATCAAGGAGGAAGACCTTGT...CACCACACCTGGCTCAAATGTTACTATTTCTAAGTGAAGAAATGAAAAAGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027916.13 |
||
| CDS-3UTR CAA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATTCTGTGACCAGCTGGTaGCTATGGGATCTGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KSLINDKCRQSSNCSISNSVTSW*LWDLVV Trigger: AACCACCAGATCCCATAGCAACCAGCTGGTCACAGA...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAATTAGTAATCAGTATTAAGATGTGTTCCTTTGAACCAAGGCCTCTGGGTATCAGCTGGATAATCTaGTTTCCTGCTCCTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VQLVISIKMCSFEPRPLGISWII*FPAPPT Trigger: AGTGGGAGGAGCAGGAAACAAGATTATCCAGCTGAT...ACCCAGAGGCCTTGGTTCAAAGGAACACATCTTAATACTGATTACTAATTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTACAAGGTCTTCCTCCTaGATAGCACTGTACTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TNKSLINDKCRQSSNCSITRSSS*IALYCE Trigger: CTCGCAGTACAGTGCTATCAAGGAGGAAGACCTTGT...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | CTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTATACAAGGTCTTCCTCCTaGATAGCACTGTACTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LINDKCRQSSNCSISNQYTRSSS*IALYCE Trigger: CTCGCAGTACAGTGCTATCAAGGAGGAAGACCTTGT...ATACTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGTCTTACACCCAGGACTaGCAAACACATAAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLINDKCRQSSNCSISNQSYTQD*QTHKQK Trigger: CTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAGA...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGATATGTTTCACCTCCTaGTTGTACTGCAGGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SLINDKCRQSSNCSISNQICFTS*LYCRAF Trigger: GAATGCCCTGCAGTACAACAAGGAGGTGAAACATAT...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTATCAGCTGGATAATCTaGTTTCCTGCTCCTCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TNKSLINDKCRQSSNCSIISWII*FPAPPT Trigger: AGTGGGAGGAGCAGGAAACAAGATTATCCAGCTGAT...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCATCTTACACCCAGGACTaGCAAACACATAAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTNKSLINDKCRQSSNCSSYTQD*QTHKQK Trigger: CTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAGA...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATATGTTTCACCTCCTaGTTGTACTGCAGGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: TTNKSLINDKCRQSSNCSICFTS*LYCRAF Trigger: GAATGCCCTGCAGTACAACAAGGAGGTGAAACATAT...TGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | TCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATCAGATGAGAACTGTTACATaGTCAAGAAGACCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLINDKCRQSSNCSISNQMRTVT*SRRPSV Trigger: CACTGAAGGTCTTCTTGACAATGTAACAGTTCTCAT...CTGATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATTCTTACACCCAGGACTaGCAAACACATAAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSLINDKCRQSSNCSISNSYTQD*QTHKQK Trigger: CTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAGA...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTATATGTTTCACCTCCTaGTTGTACTGCAGGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: TNKSLINDKCRQSSNCSIICFTS*LYCRAF Trigger: GAATGCCCTGCAGTACAACAAGGAGGTGAAACATAT...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | ACTAATAAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTATGAGAACTGTTACATaGTCAAGAAGACCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TNKSLINDKCRQSSNCSIMRTVT*SRRPSV Trigger: CACTGAAGGTCTTCTTGACAATGTAACAGTTCTCAT...AATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTTATTAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS-3UTR CAA 90 bp | AAATCGCTGATCAATGATAAATGCAGGCAGAGCTCCAATTGTTCAATTAGTAATATGAGAACTGTTACATaGTCAAGAAGACCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSLINDKCRQSSNCSISNMRTVT*SRRPSV Trigger: CACTGAAGGTCTTCTTGACAATGTAACAGTTCTCAT...ATTACTAATTGAACAATTGGAGCTCTGCCTGCATTTATCATTGATCAGCGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
||
| CDS GCA 72 bp | CAAAAGCACCCAAACCCAGAACTCCCCAGATGGTCCTaGCCAGCGCCGCGTCGGGTCCTGCCTGGGCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QKHPNPELPRWS*PAPRRVLPGLH Trigger: ATGAAGCCCAGGCAGGACCCGACGCGGCGCTGGGCAGGACCATCTGGGGAGTTCTGGGTTTGGGTGCTTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210277.2 |
||
| CDS CCA 72 bp | CAGATGGTCCTGCCCAGCGCCGCGTCGGGTCCTGCCTaGGCTTCATTCCCGTGCTCTCTGAGCTTCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QMVLPSAASGPA*ASFPCSLSFSF Trigger: AAAGGAGAAGCTCAGAGAGCACGGGAATGAAGCCCAGGCAGGACCCGACGCGGCGCTGGGCAGGACCATCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210277.2 |
||
| CDS CAA 90 bp | CGGGCCAGGGAAGAGCATATGCTCATCTGCACCAAGCGGTCGGCTTaGGTCTGCAGGTCGGTGGCCGAGGTCTTCTGCACGATGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAREEHMLICTKRSA*VCRSVAEVFCTMPR Trigger: CCTGGGCATCGTGCAGAAGACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTTCCCTGGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
||
| CDS GCA 72 bp | TCCCCAGATGGTCCTGCCCAGCGCCGCGTCGGGTCCTaGCTGGTAGTTGTAATACGGCTGGTTGATGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPDGPAQRRVGS*LVVVIRLVDDA Trigger: GGCATCATCAACCAGCCGTATTACAACTACCAGGCAGGACCCGACGCGGCGCTGGGCAGGACCATCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 |
||
| CDS GCA 72 bp | CAAAAGCACCCAAACCCAGAACTCCCCAGATGGTCCTaGCCAGCGCCGCGTCGGGTCCTGCCTGGTAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QKHPNPELPRWS*PAPRRVLPGSC Trigger: ACAACTACCAGGCAGGACCCGACGCGGCGCTGGGCAGGACCATCTGGGGAGTTCTGGGTTTGGGTGCTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 |
||
| CDS CCA 72 bp | TCTGCACCAAGCGGTCGGCTTTGGTCTGCAGGTCGGTaGCCGAGGTCTTCTGCACGATGCCCAGGTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAPSGRLWSAGR*PRSSARCPGLL Trigger: AAGGAGACCTGGGCATCGTGCAGAAGACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
||
| CDS TCA 72 bp | GATCCACTTCCCCAGGAGGCAGGTCCTCTTCCCCTATaGTGGTCAGCTTCGGGAACTTCCGGGCCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DPLPQEAGPLPL*WSASGTSGPGK Trigger: CTTCCCTGGCCCGGAAGTTCCCGAAGCTGACCATCATAGGGGAAGAGGACCTGCCTCCTGGGGAAGTGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000151769.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | CATATGCTCATCTGCACCAAGCGGTCGGCTTTGGTCTaGAGGTCGGTGGCCGAGGTCTTCTGCACGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: HMLICTKRSALV*RSVAEVFCTMP Trigger: GGGCATCGTGCAGAAGACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | GGGAACTTCCGGGCCAGGGAAGAGCATATGCTCATCTaGACCAAGCGGTCGGCTTTGGTCTGCAGGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GNFRAREEHMLI*TKRSALVCRSV Trigger: CACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTTCCCTGGCCCGGAAGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
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| CDS CAA 72 bp | GAAGAGCATATGCTCATCTGCACCAAGCGGTCGGCTTaGGTCTGCAGGTCGGTGGCCGAGGTCTTCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: EEHMLICTKRSA*VCRSVAEVFCT Trigger: CGTGCAGAAGACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
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| CDS CAA 90 bp | CGGCTGCTTCAGGATCTCCTCCCACTGCCCGTCTTCAATCAGCTCTaGATCCACTTCCCCAGGAGGCAGGTCCTCTTCCCCTATGATGGT | + |
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Preference number: 6 (lower is better) Translates to: RLLQDLLPLPVFNQL*IHFPRRQVLFPYDG Trigger: ACCATCATAGGGGAAGAGGACCTGCCTCCTGGGGAAGTGGATCAAGAGCTGATTGAAGACGGGCAGTGGGAGGAGATCCTGAAGCAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | TCAGCTTCGGGAACTTCCGGGCCAGGGAAGAGCATATaGTCATCTGCACCAAGCGGTCGGCTTTGGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SASGTSGPGKSI*SSAPSGRLWSA Trigger: TGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTTCCCTGGCCCGGAAGTTCCCGAAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | TCCTCCTTGATAGCACTGTACTGCGAGGGGCACGGCTaGTTCAGGATCTCCTCCCACTGCCCGTCTTCAATC | + |
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Preference number: 6 (lower is better) Translates to: SSLIALYCEGHG*FRISSHCPSSI Trigger: GATTGAAGACGGGCAGTGGGAGGAGATCCTGAAGCAGCCGTGCCCCTCGCAGTACAGTGCTATCAAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CCA 72 bp | AAGAGCATATGCTCATCTGCACCAAGCGGTCGGCTTTaGTCTGCAGGTCGGTGGCCGAGGTCTTCTGCACGA | + |
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Preference number: 6 (lower is better) Translates to: KSICSSAPSGRL*SAGRWPRSSAR Trigger: TCGTGCAGAAGACCTCGGCCACCGACCTGCAGACCAAAGCCGACCGCTTGGTGCAGATGAGCATATGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
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| CDS CAA 90 bp | ACGGTGTCGGGGTTCATGGCGGAAATGCAGTCTGTGACCAGCTGGTaGCTATGGGATCTGGTGGTTGTGATAATGTGCTTCCCGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TVSGFMAEMQSVTSW*LWDLVVVIMCFPAG Trigger: CCCTGCCGGGAAGCACATTATCACAACCACCAGATCCCATAGCAACCAGCTGGTCACAGACTGCATTTCCGCCATGAACCCCGACACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | CAAACCACAAGGTCTTCCTCCTTGATAGCACTGTACTaGGAGGGGCACGGCTGCTTCAGGATCTCCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: QTTRSSSLIALY*EGHGCFRISSH Trigger: GTGGGAGGAGATCCTGAAGCAGCCGTGCCCCTCGCAGTACAGTGCTATCAAGGAGGAAGACCTTGTGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CAA 90 bp | TTGGTGCCATCTAAGGGGTCAACCCAAACCACAAGGTCTTCCTCCTaGATAGCACTGTACTGCGAGGGGCACGGCTGCTTCAGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVPSKGSTQTTRSSS*IALYCEGHGCFRIS Trigger: GGAGATCCTGAAGCAGCCGTGCCCCTCGCAGTACAGTGCTATCAAGGAGGAAGACCTTGTGGTTTGGGTTGACCCCTTAGATGGCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CAA 72 bp | TCTAAGGGGTCAACCCAAACCACAAGGTCTTCCTCCTaGATAGCACTGTACTGCGAGGGGCACGGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SKGSTQTTRSSS*IALYCEGHGCF Trigger: GAAGCAGCCGTGCCCCTCGCAGTACAGTGCTATCAAGGAGGAAGACCTTGTGGTTTGGGTTGACCCCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CAA 90 bp | AGTGCAGCCAGGACACCGGCAGAGTTCATATGTTTCACCTCCTTGTaGTACTGCAGGGCATTCCCATGGATGTCTGTCAACTTCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SAARTPAEFICFTSL*YCRAFPWMSVNFPP Trigger: GGGAGGGAAGTTGACAGACATCCATGGGAATGCCCTGCAGTACAACAAGGAGGTGAAACATATGAACTCTGCCGGTGTCCTGGCTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CCA 72 bp | ATGGCGGAAATGCAGTCTGTGACCAGCTGGTTGCTATaGGATCTGGTGGTTGTGATAATGTGCTTCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: MAEMQSVTSWLL*DLVVVIMCFPA Trigger: TGCCGGGAAGCACATTATCACAACCACCAGATCCCATAGCAACCAGCTGGTCACAGACTGCATTTCCGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CAA 72 bp | GCCAGGACACCGGCAGAGTTCATATGTTTCACCTCCTaGTTGTACTGCAGGGCATTCCCATGGATGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ARTPAEFICFTS*LYCRAFPWMSV Trigger: GACAGACATCCATGGGAATGCCCTGCAGTACAACAAGGAGGTGAAACATATGAACTCTGCCGGTGTCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS TCA 72 bp | GACTATGGTTCCTGCCTTTTGAGCGATAGAATATGCTaGAGCTACCAGCCGCATCAACACGGTGTGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: DYGSCLLSDRIC*SYQPHQHGVAG Trigger: TCCAGCCACACCGTGTTGATGCGGCTGGTAGCTTCAGCATATTCTATCGCTCAAAAGGCAGGAACCATAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000151769.2 ENSMUST00000210277.2 |
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| CDS TCA 72 bp | CGTCGGGTCCTGCCTGGGCTTCATTCCCGTGCTCTCTaGGCTTCTCCTTTTCATTGTTCTGGTAGTTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: RRVLPGLHSRAL*ASPFHCSGSCN Trigger: ATTACAACTACCAGAACAATGAAAAGGAGAAGCTCAGAGAGCACGGGAATGAAGCCCAGGCAGGACCCGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210277.2 |
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| CDS GCA 72 bp | CGGGGCACAAGTGTCCCACTTCTTACACCCAGGACTTaGAAACACATAAGCAGAAGCTTTGCCTTCGATCAG | + |
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Preference number: 6 (lower is better) Translates to: RGTSVPLLTPRT*KHISRSFAFDQ Trigger: CTGATCGAAGGCAAAGCTTCTGCTTATGTGTTTGCAAGTCCTGGGTGTAAGAAGTGGGACACTTGTGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CCA 72 bp | TGTTTCACCTCCTTGTTGTACTGCAGGGCATTCCCATaGATGTCTGTCAACTTCCCTCCCACAGCATGCAAG | + |
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Preference number: 6 (lower is better) Translates to: CFTSLLYCRAFP*MSVNFPPTACK Trigger: CTTGCATGCTGTGGGAGGGAAGTTGACAGACATCCATGGGAATGCCCTGCAGTACAACAAGGAGGTGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CAA 72 bp | AGGACACCGGCAGAGTTCATATGTTTCACCTCCTTGTaGTACTGCAGGGCATTCCCATGGATGTCTGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: RTPAEFICFTSL*YCRAFPWMSVN Trigger: GTTGACAGACATCCATGGGAATGCCCTGCAGTACAACAAGGAGGTGAAACATATGAACTCTGCCGGTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | TGCCTGGTAGTTGTAATACGGCTGGTTGATGATGCCTaGGATGGCCTTTCCTTCATAAGCAATCCCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: CLVVVIRLVDDA*DGLSFISNPNE Trigger: CTCATTGGGATTGCTTATGAAGGAAAGGCCATCGCAGGCATCATCAACCAGCCGTATTACAACTACCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 |
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| CDS CAA 90 bp | CCAATGAGAACTGTTACATTGTCAAGAAGACCTTCAGTGTACTCCTaGGTGCCATCTAAGGGGTCAACCCAAACCACAAGGTCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PMRTVTLSRRPSVYS*VPSKGSTQTTRSSS Trigger: GGAGGAAGACCTTGTGGTTTGGGTTGACCCCTTAGATGGCACCAAGGAGTACACTGAAGGTCTTCTTGACAATGTAACAGTTCTCATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | GTTCTGGTAGTTGTAATACGGCTGGTTGATGATGCCTaGGATGGCCTTTCCTTCATAAGCAATCCCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: VLVVVIRLVDDA*DGLSFISNPNE Trigger: CTCATTGGGATTGCTTATGAAGGAAAGGCCATCGCAGGCATCATCAACCAGCCGTATTACAACTACCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210277.2 |
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| CDS CCA 72 bp | CTGTTACATTGTCAAGAAGACCTTCAGTGTACTCCTTaGTGCCATCTAAGGGGTCAACCCAAACCACAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LLHCQEDLQCTP*CHLRGQPKPQG Trigger: ACCTTGTGGTTTGGGTTGACCCCTTAGATGGCACCAAGGAGTACACTGAAGGTCTTCTTGACAATGTAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS CAA 72 bp | ACTGTTACATTGTCAAGAAGACCTTCAGTGTACTCCTaGGTGCCATCTAAGGGGTCAACCCAAACCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: TVTLSRRPSVYS*VPSKGSTQTTR Trigger: CCTTGTGGTTTGGGTTGACCCCTTAGATGGCACCAAGGAGTACACTGAAGGTCTTCTTGACAATGTAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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| CDS GCA 72 bp | TTACATTGTCAAGAAGACCTTCAGTGTACTCCTTGGTaGCATCTAAGGGGTCAACCCAAACCACAAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LHCQEDLQCTPW*HLRGQPKPQGL Trigger: AAGACCTTGTGGTTTGGGTTGACCCCTTAGATGGCACCAAGGAGTACACTGAAGGTCTTCTTGACAATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027916.13 ENSMUST00000110965.2 ENSMUST00000210277.2 |
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