Pregenerated sensors for BPIFB9A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067998Ensembl transcript IDs: ENSMUST00000088924.7
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 72 bp | TACAACAATGCCCATTTCCTCCAACTGTTCTTGTCCTaGTCACTCAGGGCAGAGGATCCTGGGCATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: YNNAHFLQLFLS*SLRAEDPGHTE Trigger: CTCAGTATGCCCAGGATCCTCTGCCCTGAGTGACAAGGACAAGAACAGTTGGAGGAAATGGGCATTGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | AGGCCGCCCAGGGCCTCCGTGCCTGGGATGCCCCCTGGGATTAGCTaGCCAAGACCACCAGTGGCCTTGGAGCCTGATGAGGGCTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: RPPRASVPGMPPGIS*PRPPVALEPDEGFE Trigger: CTCAAAGCCCTCATCAGGCTCCAAGGCCACTGGTGGTCTTGGCCAGCTAATCCCAGGGGGCATCCCAGGCACGGAGGCCCTGGGCGGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 90 bp | CACCAGTGGCCTTGGAGCCTGATGAGGGCTTTGAGGAATCCCCATTaGCTTCATTGCCTAGGAGTCCACCAATGCCAAGGCCTCCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: HQWPWSLMRALRNPH*LHCLGVHQCQGLPL Trigger: AAGGGGGAGGCCTTGGCATTGGTGGACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAGGCTCCAAGGCCACTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 90 bp | CCTTGGAGCCTGATGAGGGCTTTGAGGAATCCCCATTGCCTTCATTaGCTAGGAGTCCACCAATGCCAAGGCCTCCCCCTTCTCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PWSLMRALRNPHCLH*LGVHQCQGLPLLLL Trigger: AAGGAGGAGAAGGGGGAGGCCTTGGCATTGGTGGACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAGGCTCCAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 90 bp | CACCAATGCCAAGGCCTCCCCCTTCTCCTCCTTTTAGGAGGGAAATaGCATCTAAGAGGGAGAGCAGGTCAGAGCTCTCCACAGTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: HQCQGLPLLLLLGGK*HLRGRAGQSSPQCS Trigger: TGAACACTGTGGAGAGCTCTGACCTGCTCTCCCTCTTAGATGGCATTTCCCTCCTAAAAGGAGGAGAAGGGGGAGGCCTTGGCATTGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 90 bp | TACAAGTGTCTTCAGTGTTGTGGAGGAAATGGTTACCGCAATGCTTaGATTTTTGGGATCTGGAGGCAGCCGACCTCCAGGCACAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: YKCLQCCGGNGYRNA*IFGIWRQPTSRHRY Trigger: GTACCTGTGCCTGGAGGTCGGCTGCCTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 90 bp | CTTTTACAAGTGTCTTCAGTGTTGTGGAGGAAATGGTTACCGCAATaGTTGCATTTTTGGGATCTGGAGGCAGCCGACCTCCAGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: LLQVSSVLWRKWLPQ*LHFWDLEAADLQAQ Trigger: CTGTGCCTGGAGGTCGGCTGCCTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | GCCTTCCAGGTTAACTTCATCACACTTCACCATGTCCTCAATCTGTaGGGGCAGTGTGCTCATGAGGTAGTCATGGAGTTTGTCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: AFQVNFITLHHVLNL*GQCAHEVVMEFVTG Trigger: TCCAGTGACAAACTCCATGACTACCTCATGAGCACACTGCCCCCACAGATTGAGGACATGGTGAAGTGTGATGAAGTTAACCTGGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | TCCTTGACATGCATGTGGGTGTCTTGGGCATCAAGGTTGACACACTaGGTGTTGTTGGAGGCAACAGCAATTGTCGTCATTACATCCATC | + |
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Preference number: 5 (lower is better) Translates to: SLTCMWVSWASRLTH*VLLEATAIVVITSI Trigger: GATGGATGTAATGACGACAATTGCTGTTGCCTCCAACAACACCCAGTGTGTCAACCTTGATGCCCAAGACACCCACATGCATGTCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | TTCGAGCAGAGTGTCTTTGATATCCATCTTGAGCACATCGTTAAGTaGCTCCTTGACGCCATCTGGGACCACTTCATTCACTTTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FEQSVFDIHLEHIVK*LLDAIWDHFIHFLL Trigger: CAGGAGAAAGTGAATGAAGTGGTCCCAGATGGCGTCAAGGAGCCACTTAACGATGTGCTCAAGATGGATATCAAAGACACTCTGCTCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | TCTTGGCCACTTCTTTTACAAGTGTCTTCAGTGTTGTGGAGGAAATaGTTACCGCAATGCTTGCATTTTTGGGATCTGGAGGCAGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: SWPLLLQVSSVLWRK*LPQCLHFWDLEAAD Trigger: GTCGGCTGCCTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | TTTGTTATGTCAACCTTATACACGACTCTGAGCGTATTGTTTTCCTaGGAGGCAAACGCTATGTGGGTGATTTGTGCTTCCAGGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FVMSTLYTTLSVLFS*EANAMWVICASRPS Trigger: GGATGGCCTGGAAGCACAAATCACCCACATAGCGTTTGCCTCCCAGGAAAACAATACGCTCAGAGTCGTGTATAAGGTTGACATAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | AGCTTGACATCTGGTATCAGTGTGGAGTTTGAAATCTTGCTGCCATaGGAGATGAATAATTTCGTTTCCCCAGTGGCAAAGTGCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: SLTSGISVEFEILLP*EMNNFVSPVAKCSP Trigger: CGGAGAGCACTTTGCCACTGGGGAAACGAAATTATTCATCTCCCATGGCAGCAAGATTTCAAACTCCACACTGATACCAGATGTCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 90 bp | TTGCTGCCATGGGAGATGAATAATTTCGTTTCCCCAGTGGCAAAGTaGTCTCCGTTCTTTGTTATGTCAACCTTATACACGACTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LLPWEMNNFVSPVAK*SPFFVMSTLYTTLS Trigger: GCTCAGAGTCGTGTATAAGGTTGACATAACAAAGAACGGAGAGCACTTTGCCACTGGGGAAACGAAATTATTCATCTCCCATGGCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 90 bp | CAGAGCTATTCTTGGCCACTTCTTTTACAAGTGTCTTCAGTGTTGTaGAGGAAATGGTTACCGCAATGCTTGCATTTTTGGGATCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QSYSWPLLLQVSSVL*RKWLPQCLHFWDLE Trigger: CTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGAATAGCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | AGCCCATCCCCATTCAGCAGCCCTTTTCCAGAGCTCTaGTCTCCACCGAGGTTTAGTAGGCCGCCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPSPFSSPFPEL*SPPRFSRPPRA Trigger: GGCCCTGGGCGGCCTACTAAACCTCGGTGGAGACAAGAGCTCTGGAAAAGGGCTGCTGAATGGGGATGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | CCCCCTGGGATTAGCTGGCCAAGACCACCAGTGGCCTaGGAGCCTGATGAGGGCTTTGAGGAATCCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: PPGISWPRPPVA*EPDEGFEESPL Trigger: CAATGGGGATTCCTCAAAGCCCTCATCAGGCTCCAAGGCCACTGGTGGTCTTGGCCAGCTAATCCCAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | CCACCAGTGGCCTTGGAGCCTGATGAGGGCTTTGAGGAATCCCCATaGCCTTCATTGCCTAGGAGTCCACCAATGCCAAGGCCTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PPVALEPDEGFEESP*PSLPRSPPMPRPPP Trigger: AGGGGGAGGCCTTGGCATTGGTGGACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAGGCTCCAAGGCCACTGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | CCTCCTACAGGGAGATTGAGTGGAACAGGCATGGCAACAGGAAGATaGCCCACCACTGGGGGTGTTTCCACCAGGTCAAGTGTTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PPTGRLSGTGMATGR*PTTGGVSTRSSVPA Trigger: AGCGGGAACACTTGACCTGGTGGAAACACCCCCAGTGGTGGGCAATCTTCCTGTTGCCATGCCTGTTCCACTCAATCTCCCTGTAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | ACTGGGGGTGTTTCCACCAGGTCAAGTGTTCCCGCTTaGATGCTCAACATGATGGCCAAGGCCTGGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: TGGVSTRSSVPA*MLNMMAKAWRT Trigger: GGTTCTCCAGGCCTTGGCCATCATGTTGAGCATCCAAGCGGGAACACTTGACCTGGTGGAAACACCCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | TGGAACAGGCATGGCAACAGGAAGATTGCCCACCACTaGGGGTGTTTCCACCAGGTCAAGTGTTCCCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: WNRHGNRKIAHH*GCFHQVKCSRL Trigger: CAAGCGGGAACACTTGACCTGGTGGAAACACCCCCAGTGGTGGGCAATCTTCCTGTTGCCATGCCTGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | CACTGGGGGTGTTTCCACCAGGTCAAGTGTTCCCGCTaGGATGCTCAACATGATGGCCAAGGCCTGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: HWGCFHQVKCSR*DAQHDGQGLEN Trigger: GTTCTCCAGGCCTTGGCCATCATGTTGAGCATCCAAGCGGGAACACTTGACCTGGTGGAAACACCCCCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | CCTGATGAGGGCTTTGAGGAATCCCCATTGCCTTCATaGCCTAGGAGTCCACCAATGCCAAGGCCTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PDEGFEESPLPS*PRSPPMPRPPP Trigger: AGGGGGAGGCCTTGGCATTGGTGGACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | TTAGCTGGCCAAGACCACCAGTGGCCTTGGAGCCTGATGAGGGCTTaGAGGAATCCCCATTGCCTTCATTGCCTAGGAGTCCACCAATGC | + |
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Preference number: 6 (lower is better) Translates to: LAGQDHQWPWSLMRA*RNPHCLHCLGVHQC Trigger: GCATTGGTGGACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAGGCTCCAAGGCCACTGGTGGTCTTGGCCAGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 72 bp | CTGATGAGGGCTTTGAGGAATCCCCATTGCCTTCATTaGCTAGGAGTCCACCAATGCCAAGGCCTCCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LMRALRNPHCLH*LGVHQCQGLPL Trigger: AAGGGGGAGGCCTTGGCATTGGTGGACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 72 bp | CCTTGGAGCCTGATGAGGGCTTTGAGGAATCCCCATTaGCTTCATTGCCTAGGAGTCCACCAATGCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PWSLMRALRNPH*LHCLGVHQCQG Trigger: GCCTTGGCATTGGTGGACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAGGCTCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | GGGAGATTGAGTGGAACAGGCATGGCAACAGGAAGATaGCCCACCACTGGGGGTGTTTCCACCAGGTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: GRLSGTGMATGR*PTTGGVSTRSS Trigger: ACTTGACCTGGTGGAAACACCCCCAGTGGTGGGCAATCTTCCTGTTGCCATGCCTGTTCCACTCAATCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | CAAGACCACCAGTGGCCTTGGAGCCTGATGAGGGCTTaGAGGAATCCCCATTGCCTTCATTGCCTAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: QDHQWPWSLMRA*RNPHCLHCLGV Trigger: GACTCCTAGGCAATGAAGGCAATGGGGATTCCTCAAAGCCCTCATCAGGCTCCAAGGCCACTGGTGGTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | TCACTGGAGAGGAAGTATCTGGCTGCAGGTGCACACTaGCCACCTTTGGGTGGAGGTACAGGCCTTTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLERKYLAAGAH*PPLGGGTGLLG Trigger: TCCTAAAAGGCCTGTACCTCCACCCAAAGGTGGCAAGTGTGCACCTGCAGCCAGATACTTCCTCTCCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | GTTGTGGAGGAAATGGTTACCGCAATGCTTGCATTTTaGGGATCTGGAGGCAGCCGACCTCCAGGCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: VVEEMVTAMLAF*GSGGSRPPGTG Trigger: ACCTGTGCCTGGAGGTCGGCTGCCTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS TCA 72 bp | GCGTATTGTTTTCCTGGGAGGCAAACGCTATGTGGGTaGTTTGTGCTTCCAGGCCATCCATCTGCACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: AYCFPGRQTLCG*FVLPGHPSAQS Trigger: GCTCTGTGCAGATGGATGGCCTGGAAGCACAAATCACCCACATAGCGTTTGCCTCCCAGGAAAACAATACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | TTGTGGAGGAAATGGTTACCGCAATGCTTGCATTTTTaGGATCTGGAGGCAGCCGACCTCCAGGCACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LWRKWLPQCLHF*DLEAADLQAQV Trigger: TACCTGTGCCTGGAGGTCGGCTGCCTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 72 bp | GTGTCTTCAGTGTTGTGGAGGAAATGGTTACCGCAATaGTTGCATTTTTGGGATCTGGAGGCAGCCGACCTC | + |
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Preference number: 6 (lower is better) Translates to: VSSVLWRKWLPQ*LHFWDLEAADL Trigger: GAGGTCGGCTGCCTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | CTGAGCGTATTGTTTTCCTGGGAGGCAAACGCTATGTaGGTGATTTGTGCTTCCAGGCCATCCATCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: LSVLFSWEANAM*VICASRPSICT Trigger: TGTGCAGATGGATGGCCTGGAAGCACAAATCACCCACATAGCGTTTGCCTCCCAGGAAAACAATACGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | TTACAAGTGTCTTCAGTGTTGTGGAGGAAATGGTTACCGCAATGCTaGCATTTTTGGGATCTGGAGGCAGCCGACCTCCAGGCACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LQVSSVLWRKWLPQC*HFWDLEAADLQAQV Trigger: TACCTGTGCCTGGAGGTCGGCTGCCTCCAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 72 bp | GTTTTCCTGGGAGGCAAACGCTATGTGGGTGATTTGTaGTTCCAGGCCATCCATCTGCACAGAGCTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: VFLGGKRYVGDL*FQAIHLHRAIL Trigger: AAGAATAGCTCTGTGCAGATGGATGGCCTGGAAGCACAAATCACCCACATAGCGTTTGCCTCCCAGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | CTTGAGCACATCGTTAAGTGGCTCCTTGACGCCATCTaGGACCACTTCATTCACTTTCTCCTGAATGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LEHIVKWLLDAI*DHFIHFLLNGI Trigger: GATGCCATTCAGGAGAAAGTGAATGAAGTGGTCCCAGATGGCGTCAAGGAGCCACTTAACGATGTGCTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | TGCATGTGGGTGTCTTGGGCATCAAGGTTGACACACTaGGTGTTGTTGGAGGCAACAGCAATTGTCGTCATT | + |
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Preference number: 6 (lower is better) Translates to: CMWVSWASRLTH*VLLEATAIVVI Trigger: AATGACGACAATTGCTGTTGCCTCCAACAACACCCAGTGTGTCAACCTTGATGCCCAAGACACCCACATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS TCA 72 bp | TTGGGTGGAGGTACAGGCCTTTTAGGAGGTAACATTTaGTGGTTGACTGGTCCTTTGAGGACTGGAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: LGGGTGLLGGNI*WLTGPLRTGGL Trigger: AAGTCCTCCAGTCCTCAAAGGACCAGTCAACCATCAAATGTTACCTCCTAAAAGGCCTGTACCTCCACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | GTGCTTCCAGGCCATCCATCTGCACAGAGCTATTCTTaGCCACTTCTTTTACAAGTGTCTTCAGTGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VLPGHPSAQSYS*PLLLQVSSVLW Trigger: CCACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGAATAGCTCTGTGCAGATGGATGGCCTGGAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | ATTGTTTTCCTGGGAGGCAAACGCTATGTGGGTGATTaGTGCTTCCAGGCCATCCATCTGCACAGAGCTATT | + |
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Preference number: 6 (lower is better) Translates to: IVFLGGKRYVGD*CFQAIHLHRAI Trigger: AATAGCTCTGTGCAGATGGATGGCCTGGAAGCACAAATCACCCACATAGCGTTTGCCTCCCAGGAAAACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | TGCATGTGGGTGTCTTGGGCATCAAGGTTGACACACTGGGTGTTGTaGGAGGCAACAGCAATTGTCGTCATTACATCCATCTTAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CMWVSWASRLTHWVL*EATAIVVITSILAS Trigger: TGAAGCTAAGATGGATGTAATGACGACAATTGCTGTTGCCTCCAACAACACCCAGTGTGTCAACCTTGATGCCCAAGACACCCACATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | ACATGCATGTGGGTGTCTTGGGCATCAAGGTTGACACACTGGGTGTaGTTGGAGGCAACAGCAATTGTCGTCATTACATCCATCTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: TCMWVSWASRLTHWV*LEATAIVVITSILA Trigger: AGCTAAGATGGATGTAATGACGACAATTGCTGTTGCCTCCAACAACACCCAGTGTGTCAACCTTGATGCCCAAGACACCCACATGCATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | TGGGTGATTTGTGCTTCCAGGCCATCCATCTGCACAGAGCTATTCTaGGCCACTTCTTTTACAAGTGTCTTCAGTGTTGTGGAGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: WVICASRPSICTELF*ATSFTSVFSVVEEM Trigger: CATTTCCTCCACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGAATAGCTCTGTGCAGATGGATGGCCTGGAAGCACAAATCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | GTTAACTTCATCACACTTCACCATGTCCTCAATCTGTaGGGGCAGTGTGCTCATGAGGTAGTCATGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: VNFITLHHVLNL*GQCAHEVVMEF Trigger: AAACTCCATGACTACCTCATGAGCACACTGCCCCCACAGATTGAGGACATGGTGAAGTGTGATGAAGTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | AGTGTCTTTGATATCCATCTTGAGCACATCGTTAAGTaGCTCCTTGACGCCATCTGGGACCACTTCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: SVFDIHLEHIVK*LLDAIWDHFIH Trigger: GTGAATGAAGTGGTCCCAGATGGCGTCAAGGAGCCACTTAACGATGTGCTCAAGATGGATATCAAAGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | TCAACCTTATACACGACTCTGAGCGTATTGTTTTCCTaGGAGGCAAACGCTATGTGGGTGATTTGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: STLYTTLSVLFS*EANAMWVICAS Trigger: GGAAGCACAAATCACCCACATAGCGTTTGCCTCCCAGGAAAACAATACGCTCAGAGTCGTGTATAAGGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | TTGATATCCATCTTGAGCACATCGTTAAGTGGCTCCTaGACGCCATCTGGGACCACTTCATTCACTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LISILSTSLSGS*TPSGTTSFTFS Trigger: GGAGAAAGTGAATGAAGTGGTCCCAGATGGCGTCAAGGAGCCACTTAACGATGTGCTCAAGATGGATATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | ACCTTCAGTTCGAGCAGAGTGTCTTTGATATCCATCTaGAGCACATCGTTAAGTGGCTCCTTGACGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: TFSSSRVSLISI*STSLSGSLTPS Trigger: AGATGGCGTCAAGGAGCCACTTAACGATGTGCTCAAGATGGATATCAAAGACACTCTGCTCGAACTGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | TGTGCTTCCAGGCCATCCATCTGCACAGAGCTATTCTaGGCCACTTCTTTTACAAGTGTCTTCAGTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: CASRPSICTELF*ATSFTSVFSVV Trigger: CACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGAATAGCTCTGTGCAGATGGATGGCCTGGAAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | TCAGGAGGCACCACACTGTGCTCAGACCTTATGAGCTaGACATCTGGTATCAGTGTGGAGTTTGAAATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SGGTTLCSDLMS*TSGISVEFEIL Trigger: CAAGATTTCAAACTCCACACTGATACCAGATGTCAAGCTCATAAGGTCTGAGCACAGTGTGGTGCCTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | ATTTTCATTTCCTTGACATGCATGTGGGTGTCTTGGGCATCAAGGTaGACACACTGGGTGTTGTTGGAGGCAACAGCAATTGTCGTCATT | + |
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Preference number: 6 (lower is better) Translates to: IFISLTCMWVSWASR*THWVLLEATAIVVI Trigger: AATGACGACAATTGCTGTTGCCTCCAACAACACCCAGTGTGTCAACCTTGATGCCCAAGACACCCACATGCATGTCAAGGAAATGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | TCTCCGTTCTTTGTTATGTCAACCTTATACACGACTCTGAGCGTATaGTTTTCCTGGGAGGCAAACGCTATGTGGGTGATTTGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SPFFVMSTLYTTLSV*FSWEANAMWVICAS Trigger: GGAAGCACAAATCACCCACATAGCGTTTGCCTCCCAGGAAAACAATACGCTCAGAGTCGTGTATAAGGTTGACATAACAAAGAACGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS TCA 72 bp | TCATTTATTTTTGCTGTCACTATTGCTGGGATGATCTaGTCCAAGGGCAGAGGCACAGGCAGAGGCACTTTT | + |
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Preference number: 6 (lower is better) Translates to: SFIFAVTIAGMI*SKGRGTGRGTF Trigger: AAAAGTGCCTCTGCCTGTGCCTCTGCCCTTGGATCAGATCATCCCAGCAATAGTGACAGCAAAAATAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS TCA 72 bp | TCAGTGTGGAGTTTGAAATCTTGCTGCCATGGGAGATaGATAATTTCGTTTCCCCAGTGGCAAAGTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SVWSLKSCCHGR*IISFPQWQSAL Trigger: GAGAGCACTTTGCCACTGGGGAAACGAAATTATTCATCTCCCATGGCAGCAAGATTTCAAACTCCACACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 72 bp | GCAATTGTCGTCATTACATCCATCTTAGCTTCAAACTaGAGTAGGCTGATGACTGGTCCAAGCACGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: AIVVITSILASN*SRLMTGPSTPF Trigger: AAAAGGCGTGCTTGGACCAGTCATCAGCCTACTGCAGTTTGAAGCTAAGATGGATGTAATGACGACAATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | CTGAATTTTCATTTCCTTGACATGCATGTGGGTGTCTaGGGCATCAAGGTTGACACACTGGGTGTTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LNFHFLDMHVGV*GIKVDTLGVVG Trigger: TCCAACAACACCCAGTGTGTCAACCTTGATGCCCAAGACACCCACATGCATGTCAAGGAAATGAAAATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | GCACAGAGCTATTCTTGGCCACTTCTTTTACAAGTGTCTTCAGTGTaGTGGAGGAAATGGTTACCGCAATGCTTGCATTTTTGGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: AQSYSWPLLLQVSSV*WRKWLPQCLHFWDL Trigger: CAGATCCCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGAATAGCTCTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 90 bp | GACCTTATGAGCTTGACATCTGGTATCAGTGTGGAGTTTGAAATCTaGCTGCCATGGGAGATGAATAATTTCGTTTCCCCAGTGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DLMSLTSGISVEFEI*LPWEMNNFVSPVAK Trigger: CTTTGCCACTGGGGAAACGAAATTATTCATCTCCCATGGCAGCAAGATTTCAAACTCCACACTGATACCAGATGTCAAGCTCATAAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS TCA 72 bp | CTCCGTTCTTTGTTATGTCAACCTTATACACGACTCTaGGCGTATTGTTTTCCTGGGAGGCAAACGCTATGT | + |
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Preference number: 6 (lower is better) Translates to: LRSLLCQPYTRL*AYCFPGRQTLC Trigger: ACATAGCGTTTGCCTCCCAGGAAAACAATACGCTCAGAGTCGTGTATAAGGTTGACATAACAAAGAACGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | CGCCATCTGGGACCACTTCATTCACTTTCTCCTGAATaGCATCTTTTATACCGCTCACATTTTCAACTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RHLGPLHSLSPE*HLLYRSHFQLH Trigger: ATGCAGTTGAAAATGTGAGCGGTATAAAAGATGCCATTCAGGAGAAAGTGAATGAAGTGGTCCCAGATGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | TCTGGTATCAGTGTGGAGTTTGAAATCTTGCTGCCATaGGAGATGAATAATTTCGTTTCCCCAGTGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SGISVEFEILLP*EMNNFVSPVAK Trigger: CTTTGCCACTGGGGAAACGAAATTATTCATCTCCCATGGCAGCAAGATTTCAAACTCCACACTGATACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS GCA 72 bp | TGGGAGATGAATAATTTCGTTTCCCCAGTGGCAAAGTaGTCTCCGTTCTTTGTTATGTCAACCTTATACACG | + |
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Preference number: 6 (lower is better) Translates to: WEMNNFVSPVAK*SPFFVMSTLYT Trigger: CGTGTATAAGGTTGACATAACAAAGAACGGAGAGCACTTTGCCACTGGGGAAACGAAATTATTCATCTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | TCTTGGCCACTTCTTTTACAAGTGTCTTCAGTGTTGTaGAGGAAATGGTTACCGCAATGCTTGCATTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SWPLLLQVSSVL*RKWLPQCLHFW Trigger: CCAAAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | AGCTTGACATCTGGTATCAGTGTGGAGTTTGAAATCTaGCTGCCATGGGAGATGAATAATTTCGTTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLTSGISVEFEI*LPWEMNNFVSP Trigger: TGGGGAAACGAAATTATTCATCTCCCATGGCAGCAAGATTTCAAACTCCACACTGATACCAGATGTCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CCA 72 bp | ATTGGCTTTAGCACAGTAGAGGATGACAAGTCCTTTTaGAGAGATCCTGGCAGTATTAACTTGGTAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: IGFSTVEDDKSF*RDPGSINLVTE Trigger: TTCAGTTACCAAGTTAATACTGCCAGGATCTCTCCAAAAGGACTTGTCATCCTCTACTGTGCTAAAGCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | TTTTCCATCTATGGTAGCAGTAAGCATGGAGAGAACTaGCATGCCATTAGCTTCCATGTTTATCTCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: FSIYGSSKHGEN*HAISFHVYLHV Trigger: GACATGGAGATAAACATGGAAGCTAATGGCATGCAAGTTCTCTCCATGCTTACTGCTACCATAGATGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | AATAAGCCGGTATTGTTCTTGCAGTTGTTGAAGTCATaGAGGACAATGGCACAGGAGTTGGATTTTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: NKPVLFLQLLKS*RTMAQELDFSR Trigger: TCTGGAAAAATCCAACTCCTGTGCCATTGTCCTCAATGACTTCAACAACTGCAAGAACAATACCGGCTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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| CDS CAA 72 bp | TATTCTTGGCCACTTCTTTTACAAGTGTCTTCAGTGTaGTGGAGGAAATGGTTACCGCAATGCTTGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: YSWPLLLQVSSV*WRKWLPQCLHF Trigger: AAAATGCAAGCATTGCGGTAACCATTTCCTCCACAACACTGAAGACACTTGTAAAAGAAGTGGCCAAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088924.7 |
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