Pregenerated sensors for BPIFB6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068009Ensembl transcript IDs: ENSMUST00000088955.12, ENSMUST00000135501.3
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTaGTTCAGAACAACGGCGGATGAAGGCAGTTGGCAGCGTCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: GGRDRPIWLTSGLLC*FRTTADEGSWQRLA Trigger: TGCAAGACGCTGCCAACTGCCTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| 3UTR GCA 90 bp | ATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTaGTGGTTCAGAACAACGGCGGATGAAGGCAGTTGGCAGCGTCTT | + |
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Preference number: 1 (lower is better) Translates to: IGGRDRPIWLTSGLL*WFRTTADEGSWQRL Trigger: AAGACGCTGCCAACTGCCTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| 3UTR CCA 90 bp | TCCTGGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTaGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGCGGAT | + |
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Preference number: 1 (lower is better) Translates to: SWSQEVTIGGRDRPI*LTSGLLCWFRTTAD Trigger: ATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| 3UTR CCA 90 bp | TACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTaGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: YQASYFLLVTGGNHR*QGQAHLAHIWTPLL Trigger: CAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| 3UTR CCA 90 bp | TCCTCCTGTTTATTGCTGAGGCCTACCAGGCCTCGTACTTTCTCCTaGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSCLLLRPTRPRTFS*SQEVTIGGRDRPIW Trigger: CCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCTCAGCAATAAACAGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| 3UTR CCA 72 bp | GACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTaGTTCAGAACAACGGCGGATGAAGGCAGTTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: DRPIWLTSGLLC*FRTTADEGSWQ Trigger: CTGCCAACTGCCTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| 3UTR CCA 72 bp | CAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTaGCTCACATCTGGACTCCTCTGCTGGTTCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: QEVTIGGRDRPI*LTSGLLCWFRT Trigger: TGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| 3UTR CCA 72 bp | TCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTaGCAGGGACAGGCCCATCTGGCTCACATCTGGACT | + |
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Preference number: 3 (lower is better) Translates to: SYFLLVTGGNHR*QGQAHLAHIWT Trigger: AGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | CCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGGTCAGGGTCAGCTCGAGTaGCAGCCAGCAGGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSVAGTGPSGSHLDSSAGQGQLE*QPAGRR Trigger: TCTGCGGCCTGCTGGCTGGCACTCGAGCTGACCCTG...ACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR TCA 90 bp | TACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGCACAGCCCTCACTCCTaGACACAGGGGTGCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: YFLLVTGGNHRWQGQAHLHSPHS*TQGCLP Trigger: AGGCAGGCACCCCTGTGTTCAGGAGTGAGGGCTGTG...CAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGGCCTTTCCCCCTGGCTaGGGATTGCTAGCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AEAYQASYFLLVTGGNHRAFPPG*GLLASA Trigger: AGCTGAGGCTAGCAATCCGCAGCCAGGGGGAAAGGC...CCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | TCCTGGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACACCTGTGGACACACACTaGGAGATGCCCACTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SWSQEVTIGGRDRPIWLTPVDTH*EMPTPG Trigger: ACCTGGAGTGGGCATCTCCCAGTGTGTGTCCACAGG...TGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | GGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTGCAAGCTGGATAAGCTaGCCTTCCTGGAGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: GGNHRWQGQAHLAHIWTPASWIS*PSWSCT Trigger: GGTGCAGCTCCAGGAAGGCCAGCTTATCCAGCTTGC...AGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR TCA 90 bp | GGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTGTGGAAATCGCCAACTaGAGAAGATTCCCGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGNHRWQGQAHLAHIWTPVEIAN*RRFPGQ Trigger: CTGGCCCGGGAATCTTCTTCAGTTGGCGATTTCCAC...AGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | GGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGTGTGGCTCTCCTCCATaGCACTCTGGACCTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: GNHRWQGQAHLAHIWTPLCGSPP*HSGPHG Trigger: ACCATGAGGTCCAGAGTGCCATGGAGGAGAGCCACA...CAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | CGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGATCTTCTCCAGGATGTaGCTCTCCTCCATGGCACTC | + |
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Preference number: 4 (lower is better) Translates to: RWQGQAHLAHIWTPLLVQIFSRM*LSSMAL Trigger: GAGTGCCATGGAGGAGAGCCACATCCTGGAGAAGAT...CTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | CGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGATTGCTAGCCTCAGCTaGCATCTTCTCCAGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: RWQGQAHLAHIWTPLLVQIASLS*HLLQDV Trigger: CACATCCTGGAGAAGATGGCAGCTGAGGCTAGCAAT...CTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | GGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGAAGCTACCGTGGAGGTaGATCAGGCTCTTTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GTGPSGSHLDSSAGSEQRKLPWR*IRLFPA Trigger: GGCTGGAAAGAGCCTGATGCACCTCCACGGTAGCTT...CCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | GGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGATAGAGGTGACCATCTaGAGCCGGTTATCCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: GNHRWQGQAHLAHIWTPLIEVTI*SRLSCT Trigger: CGTGCAGGATAACCGGCTGCAGATGGTCACCTCTAT...CAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | GTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGATAAGCTGGCCTTCCTaGAGCTGCACCACAGGACTA | + |
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Preference number: 4 (lower is better) Translates to: VTGGNHRWQGQAHLAHIWISWPS*SCTTGL Trigger: TAGTCCTGTGGTGCAGCTCCAGGAAGGCCAGCTTAT...CCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | AGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGCCCATCAGTGGCAAGCTaGATAAGCTGGCCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPTRPRTFSWSQEVTIGGPSVAS*ISWPSW Trigger: CCAGGAAGGCCAGCTTATCCAGCTTGCCACTGATGG...GCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | GGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTGATAGCCAGAAGGTCTaGGAGTGGAAGCCCAACATG | + |
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Preference number: 4 (lower is better) Translates to: GGNHRWQGQAHLAHIWTPDSQKV*EWKPNM Trigger: CATGTTGGGCTTCCACTCCCAGACCTTCTGGCTATC...AGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGCCTGCCTCCTCATCTTaGAGAAGCCGATCAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: AEAYQASYFLLVTGGNHRPASSS*RSRSVA Trigger: AGCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGG...CCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | TCCTGGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACAAGCTGTAGTGGCTGGTaGGGATGTCAGGGCATATTT | + |
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Preference number: 4 (lower is better) Translates to: SWSQEVTIGGRDRPIWLTSCSGW*GCQGIF Trigger: AAATATGCCCTGACATCCCCACCAGCCACTACAGCT...TGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | CCATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGCGGATGAAGGAACACAGGGGTGCCTaGCTCCTCATCTTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PSGSHLDSSAGSEQRRMKEHRGA*LLILQK Trigger: CTTCTGCAAGATGAGGAGGCAGGCACCCCTGTGTTC...CTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | TCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGCGGATGAAGGCAGTTGGCTGGCCTTCCTGGAGCTaGACCACAGGACTAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SHLDSSAGSEQRRMKAVGWPSWS*TTGLKS Trigger: GGACTTTAGTCCTGTGGTGCAGCTCCAGGAAGGCCA...GCCAACTGCCTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | ATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGCGGATGAAGGCCCAGGACAGCATCAATaGCTGGACACATCAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IWLTSGLLCWFRTTADEGPGQHQ*LDTSGQ Trigger: CTGGCCTGATGTGTCCAGCCATTGATGCTGTCCTGG...GCCTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR TCA 90 bp | GCTGAGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGCAACCCTCTTGTCCTTaGGTTTCACTTCCAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: AEAYQASYFLLVTGGNHRQPSCP*VSLPRT Trigger: AGTCCTTGGAAGTGAAACTCAAGGACAAGAGGGTTG...CCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR GCA 90 bp | CCATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGCGGATGAAGACTTCCAAGGACTTCTaGAGAAGGGCCAGCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSGSHLDSSAGSEQRRMKTSKDF*RRASSA Trigger: AGCTGAGCTGGCCCTTCTGCAGAAGTCCTTGGAAGT...CTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | CATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGGTTTGGGGTCAGTCAACTTaGCCCATTTCTTGTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: HRWQGQAHLAHIWTPLLVWGQST*PISCSH Trigger: ATGTGAACAAGAAATGGGCCAAGTTGACTGACCCCA...AACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | CAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCGATCAGCAAAGGCTTTaGTTTGTGGTATGTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QEVTIGGRDRPIWLTSGLDQQRL*FVVCLG Trigger: GCCAAGACATACCACAAACCAAAGCCTTTGCTGATC...GAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | CAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGTTAACTCCGCCTCGTaGAAATCGCCAACTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QGQAHLAHIWTPLLVQNNVNSAS*KSPTEE Trigger: TTCTTCAGTTGGCGATTTCCACGAGGCGGAGTTAAC...GTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CCA 90 bp | ATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGCGGATGAAGGCTGTCCTAGTGTTTTGTaGAAGCTTACCAACCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: IWLTSGLLCWFRTTADEGCPSVL*KLTNPL Trigger: AAGAGGGTTGGTAAGCTTCCACAAAACACTAGGACA...GCCTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | CTCCTGGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACAGGCCAGGGAGGACTTaGCGCAGGGTACTGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: LLVTGGNHRWQGQAHLAHRPGRT*RRVLST Trigger: TGTGGACAGTACCCTGCGCAAAGTCCTCCCTGGCCT...GTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS GCA 90 bp | GCCTTTAATGGCCTTTCCCCCTGGCTGCGGATTGCTAGCCTCAGCTaGCATCTTCTCCAGGATGTGGCTCTCCTCCATGGCACTCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: AFNGLSPWLRIASLS*HLLQDVALLHGTLD Trigger: GTCCAGAGTGCCATGGAGGAGAGCCACATCCTGGAGAAGATGGCAGCTGAGGCTAGCAATCCGCAGCCAGGGGGAAAGGCCATTAAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS-3UTR CAA 90 bp | GAGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGGCCTGCCTCCTCATCTaGCAGAAGCCGATCAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: EAYQASYFLLVTGGNHRWACLLI*QKPISS Trigger: GCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGGC...CCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | AGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGCTTGACAGTGCCCATCTaGTCCACGGGCATGGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RPTRPRTFSWSQEVTIGGLTVPI*STGMGS Trigger: TGACCCCATGCCCGTGGACAAGATGGGCACTGTCAA...GCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 90 bp | GGGTGCTTGCCATGTCTACGCGCTGCGAACATCTCCAAGCTACCGTaGAGGTGCATCAGGCTCTTTCCAGCCTTCATGGTAACCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GCLPCLRAANISKLP*RCIRLFPAFMVTLG Trigger: CCCCAAGGTTACCATGAAGGCTGGAAAGAGCCTGATGCACCTCCACGGTAGCTTGGAGATGTTCGCAGCGCGTAGACATGGCAAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS GCA 90 bp | GACCAGGATGACCTCACAGCCCTCACTCCTGAACACAGGGGTGCCTaGCTCCTCATCTTGCAGAAGCCGATCAGTAGCTGTGATGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: DQDDLTALTPEHRGA*LLILQKPISSCDVE Trigger: CTCAACATCACAGCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGGCACCCCTGTGTTCAGGAGTGAGGGCTGTGAGGTCATCCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS GCA 90 bp | CCAGTCCAATGTGAGTCTCCAGACGGAAGAGTGACTTCGGGTGCTTaGCATGTCTACGCGCTGCGAACATCTCCAAGCTACCGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PVQCESPDGRVTSGA*HVYALRTSPSYRGG Trigger: ACCTCCACGGTAGCTTGGAGATGTTCGCAGCGCGTAGACATGGCAAGCACCCGAAGTCACTCTTCCGTCTGGAGACTCACATTGGACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 90 bp | TGGCCTTCCTGGAGCTGCACCACAGGACTAAAGTCCACCTGGATGTaGCTAGCTGTAGTGGCTGGTGGGGATGTCAGGGCATATTTGACA | + |
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Preference number: 5 (lower is better) Translates to: WPSWSCTTGLKSTWM*LAVVAGGDVRAYLT Trigger: TGTCAAATATGCCCTGACATCCCCACCAGCCACTACAGCTAGCCACATCCAGGTGGACTTTAGTCCTGTGGTGCAGCTCCAGGAAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS-3UTR CAA 90 bp | CATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGGTTATGTTGAGGACCACGTaGATTTCCATGTTCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HRWQGQAHLAHIWTPLLVMLRTT*ISMFPP Trigger: AGGAGGGAACATGGAAATCAACGTGGTCCTCAACAT...AACCAGCAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS GCA 90 bp | TCACAGCCCTCACTCCTGAACACAGGGGTGCCTGCCTCCTCATCTTaGAGAAGCCGATCAGTAGCTGTGATGTTGAGGACCACGTTGATT | + |
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Preference number: 5 (lower is better) Translates to: SQPSLLNTGVPASSS*RSRSVAVMLRTTLI Trigger: AATCAACGTGGTCCTCAACATCACAGCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGGCACCCCTGTGTTCAGGAGTGAGGGCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS-3UTR CAA 90 bp | CCATCTGGCTCACATCTGGACTCCTCTGCTGGTTCAGAACAACGGCGGATGAAGCCTCCTGTGAAACTCTaGCCAGTGATGGTCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: PSGSHLDSSAGSEQRRMKPPVKL*PVMVMP Trigger: AGGCATGACCATCACTGGCAAGAGTTTCACAGGAGG...CTTCATCCGCCGTTGTTCTGAACCAGCAGAGGAGTCCAGATGTGAGCCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | GGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGACTCCTCTGCTGTCCACAAACTTGTaGATGGCTTTGTTGTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: GNHRWQGQAHLAHIWTPLLSTNL*MALLLG Trigger: GCCTAACAACAAAGCCATCAACAAGTTTGTGGACAG...CAGAGGAGTCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | AGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGCATGGGGTCAGTCAACTaGGCCCATTTCTTGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: RPTRPRTFSWSQEVTIGGMGSVN*AHFLFT Trigger: TGTGAACAAGAAATGGGCCAAGTTGACTGACCCCAT...GCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | TACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGATGTCAGGGCATATTaGACAGTGCCCATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFLLVTGGNHRWQGQAHLDVRAY*TVPILS Trigger: GGACAAGATGGGCACTGTCAAATATGCCCTGACATC...CAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | TACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGCCAACCCTCTTGTCCTaGAGTTTCACTTCCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YFLLVTGGNHRWQGQAHLPTLLS*SFTSKD Trigger: GTCCTTGGAAGTGAAACTCAAGGACAAGAGGGTTGG...CAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | GCTGAGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGGGGGGTTTGTTTATCTaGACCTTGATCAGCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEAYQASYFLLVTGGNHRGGLFI*TLISKG Trigger: GCCTTTGCTGATCAAGGTCAAGATAAACAAACCCCC...CCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCTCAGC 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | AGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGCTCCTTTACCTTCATATaGCTGAGGCCTTTAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPTRPRTFSWSQEVTIGGSFTFI*LRPLMA Trigger: GGCCATTAAAGGCCTCAGCAATATGAAGGTAAAGGA...GCCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 90 bp | CTTGGCCACCTGCGGGATGAAGCCAGCCAGTGTCCTAGTGTTTTGTaGAAGCTTACCAACCCTCTTGTCCTTGAGTTTCACTTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGHLRDEASQCPSVL*KLTNPLVLEFHFQG Trigger: TCCTTGGAAGTGAAACTCAAGGACAAGAGGGTTGGTAAGCTTCCACAAAACACTAGGACACTGGCTGGCTTCATCCCGCAGGTGGCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 90 bp | GTCCAGCTCAGCCAGGTTATAATTGATAGCCAGAAGGTCTGGGAGTaGAAGCCCAACATGGAGTACATCGTTCACCACAGGGATGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQLSQVIIDSQKVWE*KPNMEYIVHHRDVG Trigger: GCCTACATCCCTGTGGTGAACGATGTACTCCATGTTGGGCTTCCACTCCCAGACCTTCTGGCTATCAATTATAACCTGGCTGAGCTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS-3UTR CAA 90 bp | TCACAGGAGGTAACCATCGGTGGCAGGGACAGGCCCATCTGGCTCACATCTGGATTGTTGATGGCTTTGTaGTTAGGCAGGTTGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQEVTIGGRDRPIWLTSGLLMAL*LGRLVF Trigger: GAAAACCAACCTGCCTAACAACAAAGCCATCAACAA...TCCAGATGTGAGCCAGATGGGCCTGTCCCTGCCACCGATGGTTACCTCCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
||
| CDS-3UTR CAA 90 bp | GAGGCCTACCAGGCCTCGTACTTTCTCCTGGTCACAGGAGGTAACCATCGGTGGTTGTTTATCTTGACCTaGATCAGCAAAGGCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EAYQASYFLLVTGGNHRWLFILT*ISKGFG Trigger: ACCAAAGCCTTTGCTGATCAAGGTCAAGATAAACAA...CCACCGATGGTTACCTCCTGTGACCAGGAGAAAGTACGAGGCCTGGTAGGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 90 bp | TACTATGTCCAGCTCAGCCAGGTTATAATTGATAGCCAGAAGGTCTaGGAGTGGAAGCCCAACATGGAGTACATCGTTCACCACAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YYVQLSQVIIDSQKV*EWKPNMEYIVHHRD Trigger: ATCCCTGTGGTGAACGATGTACTCCATGTTGGGCTTCCACTCCCAGACCTTCTGGCTATCAATTATAACCTGGCTGAGCTGGACATAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS GCA 72 bp | GGCCTTTCCCCCTGGCTGCGGATTGCTAGCCTCAGCTaGCATCTTCTCCAGGATGTGGCTCTCCTCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLSPWLRIASLS*HLLQDVALLHG Trigger: GCCATGGAGGAGAGCCACATCCTGGAGAAGATGGCAGCTGAGGCTAGCAATCCGCAGCCAGGGGGAAAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | AGCTCAGCTGTGAGGAAGGTGGCTGAGAGCAGCAGTTGTGAGTCCTaGGCTGAGCCCTCGGGGAACTCCGGGAGTGACCCATCAGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSAVRKVAESSSCES*AEPSGNSGSDPSVA Trigger: TGCCACTGATGGGTCACTCCCGGAGTTCCCCGAGGGCTCAGCCAAGGACTCACAACTGCTGCTCTCAGCCACCTTCCTCACAGCTGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CCA 72 bp | TCGGGGAACTCCGGGAGTGACCCATCAGTGGCAAGCTaGATAAGCTGGCCTTCCTGGAGCTGCACCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGNSGSDPSVAS*ISWPSWSCTTG Trigger: TCCTGTGGTGCAGCTCCAGGAAGGCCAGCTTATCCAGCTTGCCACTGATGGGTCACTCCCGGAGTTCCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS GCA 72 bp | GACCTCACAGCCCTCACTCCTGAACACAGGGGTGCCTaGCTCCTCATCTTGCAGAAGCCGATCAGTAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DLTALTPEHRGA*LLILQKPISSC Trigger: ACAGCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGGCACCCCTGTGTTCAGGAGTGAGGGCTGTGAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
||
| CDS CCA 72 bp | CCTTCCTGGAGCTGCACCACAGGACTAAAGTCCACCTaGATGTGGCTAGCTGTAGTGGCTGGTGGGGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSWSCTTGLKST*MWLAVVAGGDV Trigger: GACATCCCCACCAGCCACTACAGCTAGCCACATCCAGGTGGACTTTAGTCCTGTGGTGCAGCTCCAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
||
| CDS CCA 72 bp | TCCGGGAGTGACCCATCAGTGGCAAGCTGGATAAGCTaGCCTTCCTGGAGCTGCACCACAGGACTAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSDPSVASWIS*PSWSCTTGLKS Trigger: GGACTTTAGTCCTGTGGTGCAGCTCCAGGAAGGCCAGCTTATCCAGCTTGCCACTGATGGGTCACTCCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CCA 72 bp | GACCCATCAGTGGCAAGCTGGATAAGCTGGCCTTCCTaGAGCTGCACCACAGGACTAAAGTCCACCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: DPSVASWISWPS*SCTTGLKSTWM Trigger: CATCCAGGTGGACTTTAGTCCTGTGGTGCAGCTCCAGGAAGGCCAGCTTATCCAGCTTGCCACTGATGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | GGTGGGGATGTCAGGGCATATTTGACAGTGCCCATCTaGTCCACGGGCATGGGGTCAGTCAACTTGGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGDVRAYLTVPI*STGMGSVNLAH Trigger: ATGGGCCAAGTTGACTGACCCCATGCCCGTGGACAAGATGGGCACTGTCAAATATGCCCTGACATCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | CTCACAGCCCTCACTCCTGAACACAGGGGTGCCTGCCTCCTCATCTaGCAGAAGCCGATCAGTAGCTGTGATGTTGAGGACCACGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LTALTPEHRGACLLI*QKPISSCDVEDHVD Trigger: ATCAACGTGGTCCTCAACATCACAGCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGGCACCCCTGTGTTCAGGAGTGAGGGCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | TGGATGTGGCTAGCTGTAGTGGCTGGTGGGGATGTCAGGGCATATTaGACAGTGCCCATCTTGTCCACGGGCATGGGGTCAGTCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: WMWLAVVAGGDVRAY*TVPILSTGMGSVNL Trigger: CAAGTTGACTGACCCCATGCCCGTGGACAAGATGGGCACTGTCAAATATGCCCTGACATCCCCACCAGCCACTACAGCTAGCCACATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS GCA 72 bp | TCACTCCTGAACACAGGGGTGCCTGCCTCCTCATCTTaGAGAAGCCGATCAGTAGCTGTGATGTTGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SLLNTGVPASSS*RSRSVAVMLRT Trigger: GGTCCTCAACATCACAGCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGGCACCCCTGTGTTCAGGAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS GCA 72 bp | TCAGTGGCAAGCTGGATAAGCTGGCCTTCCTGGAGCTaGACCACAGGACTAAAGTCCACCTGGATGTGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SVASWISWPSWS*TTGLKSTWMWL Trigger: TAGCCACATCCAGGTGGACTTTAGTCCTGTGGTGCAGCTCCAGGAAGGCCAGCTTATCCAGCTTGCCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS GCA 72 bp | CTACGCGCTGCGAACATCTCCAAGCTACCGTGGAGGTaGATCAGGCTCTTTCCAGCCTTCATGGTAACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRAANISKLPWR*IRLFPAFMVTL Trigger: CAAGGTTACCATGAAGGCTGGAAAGAGCCTGATGCACCTCCACGGTAGCTTGGAGATGTTCGCAGCGCGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 72 bp | CCATGTCTACGCGCTGCGAACATCTCCAAGCTACCGTaGAGGTGCATCAGGCTCTTTCCAGCCTTCATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PCLRAANISKLP*RCIRLFPAFMV Trigger: TACCATGAAGGCTGGAAAGAGCCTGATGCACCTCCACGGTAGCTTGGAGATGTTCGCAGCGCGTAGACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 72 bp | CTCACTCCTGAACACAGGGGTGCCTGCCTCCTCATCTaGCAGAAGCCGATCAGTAGCTGTGATGTTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LTPEHRGACLLI*QKPISSCDVED Trigger: GTCCTCAACATCACAGCTACTGATCGGCTTCTGCAAGATGAGGAGGCAGGCACCCCTGTGTTCAGGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | GTAGTGGCTGGTGGGGATGTCAGGGCATATTTGACAGTGCCCATCTaGTCCACGGGCATGGGGTCAGTCAACTTGGCCCATTTCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VVAGGDVRAYLTVPI*STGMGSVNLAHFLF Trigger: GAACAAGAAATGGGCCAAGTTGACTGACCCCATGCCCGTGGACAAGATGGGCACTGTCAAATATGCCCTGACATCCCCACCAGCCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CCA 72 bp | CTTCATATTGCTGAGGCCTTTAATGGCCTTTCCCCCTaGCTGCGGATTGCTAGCCTCAGCTGCCATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHIAEAFNGLSP*LRIASLSCHLL Trigger: GAGAAGATGGCAGCTGAGGCTAGCAATCCGCAGCCAGGGGGAAAGGCCATTAAAGGCCTCAGCAATATGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | GCATCAATGGCTGGACACATCAGGCCAGGGAGGACTTaGCGCAGGGTACTGTCCACAAACTTGTTGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASMAGHIRPGRT*RRVLSTNLLMA Trigger: AGCCATCAACAAGTTTGTGGACAGTACCCTGCGCAAAGTCCTCCCTGGCCTGATGTGTCCAGCCATTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CCA 72 bp | AAAGTCCACCTGGATGTGGCTAGCTGTAGTGGCTGGTaGGGATGTCAGGGCATATTTGACAGTGCCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: KVHLDVASCSGW*GCQGIFDSAHL Trigger: AAGATGGGCACTGTCAAATATGCCCTGACATCCCCACCAGCCACTACAGCTAGCCACATCCAGGTGGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | GTGATAACAGGCTCCAGGACGTCCTTTACCTTCATATaGCTGAGGCCTTTAATGGCCTTTCCCCCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VITGSRTSFTFI*LRPLMAFPPGC Trigger: GCAGCCAGGGGGAAAGGCCATTAAAGGCCTCAGCAATATGAAGGTAAAGGACGTCCTGGAGCCTGTTATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | TCCACGGGCATGGGGTCAGTCAACTTGGCCCATTTCTaGTTCACATACTCCAGGACAGCATCAATGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: STGMGSVNLAHF*FTYSRTASMAG Trigger: TCCAGCCATTGATGCTGTCCTGGAGTATGTGAACAAGAAATGGGCCAAGTTGACTGACCCCATGCCCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | ACCTTGATCAGCAAAGGCTTTGGTTTGTGGTATGTCTaGGCCACCTGCGGGATGAAGCCAGCCAGTGTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: TLISKGFGLWYV*ATCGMKPASVL Trigger: TAGGACACTGGCTGGCTTCATCCCGCAGGTGGCCAAGACATACCACAAACCAAAGCCTTTGCTGATCAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 90 bp | ATCAGGCCAGGGAGGACTTTGCGCAGGGTACTGTCCACAAACTTGTaGATGGCTTTGTTGTTAGGCAGGTTGGTTTTCACGCTGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRPGRTLRRVLSTNL*MALLLGRLVFTLTR Trigger: CCTGGTCAGCGTGAAAACCAACCTGCCTAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCTGCGCAAAGTCCTCCCTGGCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | CACATCAGGCCAGGGAGGACTTTGCGCAGGGTACTGTCCACAAACTaGTTGATGGCTTTGTTGTTAGGCAGGTTGGTTTTCACGCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: HIRPGRTLRRVLSTN*LMALLLGRLVFTLT Trigger: GGTCAGCGTGAAAACCAACCTGCCTAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCTGCGCAAAGTCCTCCCTGGCCTGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | AGGGTACTGTCCACAAACTTGTTGATGGCTTTGTTGTTAGGCAGGTaGGTTTTCACGCTGACCAGGATGACCTCACAGCCCTCACTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVLSTNLLMALLLGR*VFTLTRMTSQPSLL Trigger: CAGGAGTGAGGGCTGTGAGGTCATCCTGGTCAGCGTGAAAACCAACCTGCCTAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | TCCAGGACAGCATCAATGGCTGGACACATCAGGCCAGGGAGGACTTaGCGCAGGGTACTGTCCACAAACTTGTTGATGGCTTTGTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SRTASMAGHIRPGRT*RRVLSTNLLMALLL Trigger: TAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCTGCGCAAAGTCCTCCCTGGCCTGATGTGTCCAGCCATTGATGCTGTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | GCCAGTGTCCTAGTGTTTTGTGGAAGCTTACCAACCCTCTTGTCCTaGAGTTTCACTTCCAAGGACTTCTGCAGAAGGGCCAGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASVLVFCGSLPTLLS*SFTSKDFCRRASSA Trigger: AGCTGAGCTGGCCCTTCTGCAGAAGTCCTTGGAAGTGAAACTCAAGGACAAGAGGGTTGGTAAGCTTCCACAAAACACTAGGACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 90 bp | AAGCCAGCCAGTGTCCTAGTGTTTTGTGGAAGCTTACCAACCCTCTaGTCCTTGAGTTTCACTTCCAAGGACTTCTGCAGAAGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KPASVLVFCGSLPTL*SLSFTSKDFCRRAS Trigger: GCTGGCCCTTCTGCAGAAGTCCTTGGAAGTGAAACTCAAGGACAAGAGGGTTGGTAAGCTTCCACAAAACACTAGGACACTGGCTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS GCA 72 bp | AGCAAAGGCTTTGGTTTGTGGTATGTCTTGGCCACCTaGGGGATGAAGCCAGCCAGTGTCCTAGTGTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SKGFGLWYVLAT*GMKPASVLVFC Trigger: ACAAAACACTAGGACACTGGCTGGCTTCATCCCGCAGGTGGCCAAGACATACCACAAACCAAAGCCTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 72 bp | CTGCGGGATGAAGCCAGCCAGTGTCCTAGTGTTTTGTaGAAGCTTACCAACCCTCTTGTCCTTGAGTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRDEASQCPSVL*KLTNPLVLEFH Trigger: GTGAAACTCAAGGACAAGAGGGTTGGTAAGCTTCCACAAAACACTAGGACACTGGCTGGCTTCATCCCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 72 bp | CACCTGCGGGATGAAGCCAGCCAGTGTCCTAGTGTTTaGTGGAAGCTTACCAACCCTCTTGTCCTTGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLRDEASQCPSV*WKLTNPLVLEF Trigger: AAACTCAAGGACAAGAGGGTTGGTAAGCTTCCACAAAACACTAGGACACTGGCTGGCTTCATCCCGCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 90 bp | AGGACTTTGCGCAGGGTACTGTCCACAAACTTGTTGATGGCTTTGTaGTTAGGCAGGTTGGTTTTCACGCTGACCAGGATGACCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RTLRRVLSTNLLMAL*LGRLVFTLTRMTSQ Trigger: CTGTGAGGTCATCCTGGTCAGCGTGAAAACCAACCTGCCTAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCTGCGCAAAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
||
| CDS CCA 72 bp | TTTATCTTGACCTTGATCAGCAAAGGCTTTGGTTTGTaGTATGTCTTGGCCACCTGCGGGATGAAGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FILTLISKGFGL*YVLATCGMKPA Trigger: GGCTGGCTTCATCCCGCAGGTGGCCAAGACATACCACAAACCAAAGCCTTTGCTGATCAAGGTCAAGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
||
| CDS CCA 72 bp | CAGCTCAGCCAGGTTATAATTGATAGCCAGAAGGTCTaGGAGTGGAAGCCCAACATGGAGTACATCGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLSQVIIDSQKV*EWKPNMEYIVH Trigger: GTGAACGATGTACTCCATGTTGGGCTTCCACTCCCAGACCTTCTGGCTATCAATTATAACCTGGCTGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 72 bp | TCCTCATCTTGCAGAAGCCGATCAGTAGCTGTGATGTaGAGGACCACGTTGATTTCCATGTTCCCTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSCRSRSVAVM*RTTLISMFPPV Trigger: CACAGGAGGGAACATGGAAATCAACGTGGTCCTCAACATCACAGCTACTGATCGGCTTCTGCAAGATGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | CGCAGGGTACTGTCCACAAACTTGTTGATGGCTTTGTaGTTAGGCAGGTTGGTTTTCACGCTGACCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RRVLSTNLLMAL*LGRLVFTLTRM Trigger: CATCCTGGTCAGCGTGAAAACCAACCTGCCTAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
||
| CDS CAA 72 bp | GGGAGGACTTTGCGCAGGGTACTGTCCACAAACTTGTaGATGGCTTTGTTGTTAGGCAGGTTGGTTTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: GRTLRRVLSTNL*MALLLGRLVFT Trigger: CGTGAAAACCAACCTGCCTAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCTGCGCAAAGTCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
||
| CDS CAA 72 bp | CCAGGGAGGACTTTGCGCAGGGTACTGTCCACAAACTaGTTGATGGCTTTGTTGTTAGGCAGGTTGGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PGRTLRRVLSTN*LMALLLGRLVF Trigger: GAAAACCAACCTGCCTAACAACAAAGCCATCAACAAGTTTGTGGACAGTACCCTGCGCAAAGTCCTCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 90 bp | TCATCTTGCAGAAGCCGATCAGTAGCTGTGATGTTGAGGACCACGTaGATTTCCATGTTCCCTCCTGTGAAACTCTTGCCAGTGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSCRSRSVAVMLRTT*ISMFPPVKLLPVMV Trigger: GACCATCACTGGCAAGAGTTTCACAGGAGGGAACATGGAAATCAACGTGGTCCTCAACATCACAGCTACTGATCGGCTTCTGCAAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | AGAAGCCGATCAGTAGCTGTGATGTTGAGGACCACGTaGATTTCCATGTTCCCTCCTGTGAAACTCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RSRSVAVMLRTT*ISMFPPVKLLP Trigger: TGGCAAGAGTTTCACAGGAGGGAACATGGAAATCAACGTGGTCCTCAACATCACAGCTACTGATCGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088955.12 ENSMUST00000135501.3 |
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| CDS CAA 72 bp | CTAGTGTTTTGTGGAAGCTTACCAACCCTCTTGTCCTaGAGTTTCACTTCCAAGGACTTCTGCAGAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVFCGSLPTLLS*SFTSKDFCRRA Trigger: GGCCCTTCTGCAGAAGTCCTTGGAAGTGAAACTCAAGGACAAGAGGGTTGGTAAGCTTCCACAAAACACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CCA 72 bp | GGGTTTGTTTATCTTGACCTTGATCAGCAAAGGCTTTaGTTTGTGGTATGTCTTGGCCACCTGCGGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: GFVYLDLDQQRL*FVVCLGHLRDE Trigger: TTCATCCCGCAGGTGGCCAAGACATACCACAAACCAAAGCCTTTGCTGATCAAGGTCAAGATAAACAAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 72 bp | TTGTTTATCTTGACCTTGATCAGCAAAGGCTTTGGTTaGTGGTATGTCTTGGCCACCTGCGGGATGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LFILTLISKGFG*WYVLATCGMKP Trigger: TGGCTTCATCCCGCAGGTGGCCAAGACATACCACAAACCAAAGCCTTTGCTGATCAAGGTCAAGATAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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| CDS CAA 72 bp | AGTGTCCTAGTGTTTTGTGGAAGCTTACCAACCCTCTaGTCCTTGAGTTTCACTTCCAAGGACTTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SVLVFCGSLPTL*SLSFTSKDFCR Trigger: TCTGCAGAAGTCCTTGGAAGTGAAACTCAAGGACAAGAGGGTTGGTAAGCTTCCACAAAACACTAGGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088955.12 |
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