Pregenerated sensors for BPIFB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068008Ensembl transcript IDs: ENSMUST00000088950.8, ENSMUST00000109760.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAAGGATCAGTTTATTAAAGCTGGGATTGAACCAAGGTGCTATGTaGTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACCCCA | + |
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Preference number: 1 (lower is better) Translates to: PRISLLKLGLNQGAM*FLKQISGYPAIPTP Trigger: TGGGGTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGCTTTAATAAACTGATCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGACTGGGAGGGAAACTaGGGCAGAGTGGGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: NRGQGGPGWARGTYTVTNDWEGN*GRVGRQ Trigger: CTGTCTGCCCACTCTGCCTCAGTTTCCCTCCCAGTC...ATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCACCCCAAAACAGGCATaGTCACAGGAACAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LNQGAMCFLKQISGYPAITPKQA*SQEQRA Trigger: TGCCCTCTGTTCCTGTGATCATGCCTGTTTTGGGGT...GATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| 3UTR CCA 72 bp | CATGATCACAGGAACAGAGGGCAAGGTGGGCCCGGGTaGGCAAGGGGCACTTATACTGTCACCAATGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: HDHRNRGQGGPG*ARGTYTVTNAG Trigger: GCCTGCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTGTTCCTGTGATCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| 3UTR GCA 72 bp | AGTTTATTAAAGCTGGGATTGAACCAAGGTGCTATGTaGTTTCTGAAGCAGATCAGTGGCTATCCAGCCATC | + |
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Preference number: 3 (lower is better) Translates to: SLLKLGLNQGAM*FLKQISGYPAI Trigger: GATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGCTTTAATAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | CAAAACAGGCATGATCACAGGAACAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGAGAGCAGGAGGTGCTaGGCAGGGGGCAGTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: QNRHDHRNRGQGGPGWARESRRC*AGGSFP Trigger: GGGGAAACTGCCCCCTGCTCAGCACCTCCTGCTCTC...CCTTGCCCACCCGGGCCCACCTTGCCCTCTGTTCCTGTGATCATGCCTGTTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCCAATCCGAGCAAGCGTaGCCACTGTCTCAAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QRARWARVGKGHLYCHQCQSEQA*PLSQAA Trigger: GGCTGCTTGAGACAGTGGGCACGCTTGCTCGGATTG...GCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCAAGGAGGAGGCCAGCTaGACACTTAGCCGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QRARWARVGKGHLYCHQCKEEAS*TLSRSR Trigger: CCTGGAACGGCTAAGTGTCCAGCTGGCCTCCTCCTT...GCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | GGCAGAGTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCAGCCCTGACATCAGACTaGTGTGACCCAGGAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: GRVGRQIGLCSEQGEQQPALTSD*CDPGAC Trigger: GCACGCTCCTGGGTCACATCAGTCTGATGTCAGGGC...TGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCACTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | CCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGCCCTGACATCAGACTaGTGTGACCCAGGAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PGWARGTYTVTNAGLRLGALTSD*CDPGAC Trigger: GCACGCTCCTGGGTCACATCAGTCTGATGTCAGGGC...TCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | GTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCATACCGCCGTGGGCAGCAGCCCTaGCATCAGACTGATGTGACC | + |
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Preference number: 4 (lower is better) Translates to: VGRQIGLCSEQGEQQPYRRGQQP*HQTDVT Trigger: GGTCACATCAGTCTGATGTCAGGGCTGCTGCCCACG...GCGGTATGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | CAAAACAGGCATGATCACAGGAACAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGACAGCACATGGATGGTaGCTGGGATGGAGACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QNRHDHRNRGQGGPGWARTAHGW*LGWRLW Trigger: CCACAGTCTCCATCCCAGTCACCATCCATGTGCTGT...CCTTGCCCACCCGGGCCCACCTTGCCCTCTGTTCCTGTGATCATGCCTGTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | GGCAGAGTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCACCCGGACCACATCACTaGGCCATTCTTCCAGACGGG | + |
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Preference number: 4 (lower is better) Translates to: GRVGRQIGLCSEQGEQQPPGPHH*AILPDG Trigger: CCCGTCTGGAAGAATGGCTCAGTGATGTGGTCCGGG...TGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCACTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAAGGAGGAGGCCAGCTaGACACTTAGCCGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ARVGKGHLYCHQCRLKTGKEEAS*TLSRSR Trigger: CCTGGAACGGCTAAGTGTCCAGCTGGCCTCCTCCTT...CCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | GTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCATACCGCGACATCAGACTGATGTaGCCCAGGAGCGTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VGRQIGLCSEQGEQQPYRDIRLM*PRSVLQ Trigger: CTGCAGCACGCTCCTGGGTCACATCAGTCTGATGTC...GCGGTATGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCATACCGCGCACCCAGGAGGCCCTaGTTCACTGATGTCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: VGRQIGLCSEQGEQQPYRAPRRP*FTDVTV Trigger: GACTGTGACATCAGTGAACCAGGGCCTCCTGGGTGC...GCGGTATGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGAGTGGGACAGTCACTTaGGAGGTGTGGTCCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: TEGKVGPGGQGALILSPMSGTVT*EVWSSL Trigger: CAAAGAGGACCACACCTCCCAAGTGACTGTCCCACT...CATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCACAGAAGACAGCACATaGATGGTGACTGGGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: QRARWARVGKGHLYCHQCTEDST*MVTGME Trigger: CTCCATCCCAGTCACCATCCATGTGCTGTCTTCTGT...GCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | GGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCGAGAGCAGGAGGTGCTaGGCAGGGGGCAGTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GLNQGAMCFLKQISGYPAESRRC*AGGSFP Trigger: GGGGAAACTGCCCCCTGCTCAGCACCTCCTGCTCTC...GGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | AGAGTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCATACCCCGGACCACATCACTaGGCCATTCTTCCAGACGGG | + |
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Preference number: 4 (lower is better) Translates to: RVGRQIGLCSEQGEQQPYPGPHH*AILPDG Trigger: CCCGTCTGGAAGAATGGCTCAGTGATGTGGTCCGGG...GTATGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | TGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACCCCAAAAGACACGTTCACCTCTaGGGCCAGCTGCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CYVLSEADQWLSSHPHPKRHVHL*GQLQEA Trigger: GGCCTCCTGCAGCTGGCCGCAGAGGTGAACGTGTCT...TTTGGGGTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCATACCGCAGTGGGACAGTCACTTaGGAGGTGTGGTCCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VGRQIGLCSEQGEQQPYRSGTVT*EVWSSL Trigger: CAAAGAGGACCACACCTCCCAAGTGACTGTCCCACT...GCGGTATGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | TGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACCCCAAAGACATCAGACTGATGTaGCCCAGGAGCGTGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CYVLSEADQWLSSHPHPKDIRLM*PRSVLQ Trigger: CTGCAGCACGCTCCTGGGTCACATCAGTCTGATGTC...TTTGGGGTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | GGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGGAAACTCAATCCGAGCAAGCGTaGCCACTGTCTCAAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GKGHLYCHQCRLKTGRETQSEQA*PLSQAA Trigger: GGCTGCTTGAGACAGTGGGCACGCTTGCTCGGATTG...AGTTTCCCTCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | TGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACCCCAAAAGGCTAACCTTGGTGTaGAGGTTCAGCTGCACCCCG | + |
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Preference number: 4 (lower is better) Translates to: CYVLSEADQWLSSHPHPKRLTLV*RFSCTP Trigger: CGGGGTGCAGCTGAACCTGCACACCAAGGTTAGCCT...TTTGGGGTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | GGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGGAAACTAGGGCACCGTTGGTTTaGAGGAGCCCAAACACGGTG | + |
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Preference number: 4 (lower is better) Translates to: GKGHLYCHQCRLKTGRETRAPLV*RSPNTV Trigger: CACCGTGTTTGGGCTCCTGCAAACCAACGGTGCCCT...AGTTTCCCTCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | TGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACCCCAAAAGGGCACCGTTGGTTTaGAGGAGCCCAAACACGGTG | + |
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Preference number: 4 (lower is better) Translates to: CYVLSEADQWLSSHPHPKRAPLV*RSPNTV Trigger: CACCGTGTTTGGGCTCCTGCAAACCAACGGTGCCCT...TTTGGGGTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCGCACCCAGGAGGCCCTaGTTCACTGATGTCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: AGIEPRCYVLSEADQWLSAPRRP*FTDVTV Trigger: GACTGTGACATCAGTGAACCAGGGCCTCCTGGGTGC...GGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR TCA 90 bp | GCTGGGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCACAGCACATGGATGGTaGCTGGGATGGAGACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AGIEPRCYVLSEADQWLSTAHGW*LGWRLW Trigger: CCACAGTCTCCATCCCAGTCACCATCCATGTGCTGT...GGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | TTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCAGGCTAACCTTGGTGTaGAGGTTCAGCTGCACCCCG | + |
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Preference number: 4 (lower is better) Translates to: LNQGAMCFLKQISGYPAIRLTLV*RFSCTP Trigger: CGGGGTGCAGCTGAACCTGCACACCAAGGTTAGCCT...GATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCTGGGATGGAGACTGTaGCCTTCTTGTTCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EPRCYVLSEADQWLSSHPLGWRL*PSCSAA Trigger: TGCTGCAGAACAAGAAGGCCACAGTCTCCATCCCAG...GGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGGAAACTGGCTGAAGAGATAGAGTaGGACAGTCACTTGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: ARGTYTVTNAGLRLGGKLAEEIE*DSHLGG Trigger: ACCTCCCAAGTGACTGTCCCACTCTATCTCTTCAGC...CAGTTTCCCTCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCCTGGGATGGAGACTGTaGCCTTCTTGTTCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GLNQGAMCFLKQISGYPALGWRL*PSCSAA Trigger: TGCTGCAGAACAAGAAGGCCACAGTCTCCATCCCAG...GGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCGATGCATCAAAAGGTTaGGGAAAGGAGGAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGIEPRCYVLSEADQWLSDASKG*GKEEAS Trigger: GCTGGCCTCCTCCTTTCCCCAACCTTTTGATGCATC...GGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | GGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCGATGCATCAAAAGGTTaGGGAAAGGAGGAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLNQGAMCFLKQISGYPADASKG*GKEEAS Trigger: GCTGGCCTCCTCCTTTCCCCAACCTTTTGATGCATC...GGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CCA 90 bp | TTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCACAGAAGACAGCACATaGATGGTGACTGGGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: LNQGAMCFLKQISGYPAITEDST*MVTGME Trigger: CTCCATCCCAGTCACCATCCATGTGCTGTCTTCTGT...GATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | GGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGGAAACTCACTGTGAGCACAACTaGATTCTCAATGATATCGAC | + |
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Preference number: 4 (lower is better) Translates to: GKGHLYCHQCRLKTGRETHCEHN*ILNDID Trigger: GTCGATATCATTGAGAATGCAGTTGTGCTCACAGTG...AGTTTCCCTCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGGAAACTGCACTGTGAGCACAACTaGATTCTCAATGATATCGAC | + |
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Preference number: 4 (lower is better) Translates to: ARGTYTVTNAGLRLGGKLHCEHN*ILNDID Trigger: GTCGATATCATTGAGAATGCAGTTGTGCTCACAGTG...CAGTTTCCCTCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS GCA 90 bp | ATGCCCAGTGCCACTTTCGAAGACACGTTCACCTCTGCGGCCAGCTaGAGGAGGCCCACCAGGGGACCGGAGCCATGCAGGCTAACCTTG | + |
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Preference number: 5 (lower is better) Translates to: MPSATFEDTFTSAAS*RRPTRGPEPCRLTL Trigger: CAAGGTTAGCCTGCATGGCTCCGGTCCCCTGGTGGGCCTCCTGCAGCTGGCCGCAGAGGTGAACGTGTCTTCGAAAGTGGCACTGGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS GCA 90 bp | TCTGGATGGCTTTGCCCAGTTCATCCTTGTCAATCCGAGCAAGCGTaGCCACTGTCTCAAGCAGCCCCAGGCATGGAGTGGCCAGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SGWLCPVHPCQSEQA*PLSQAAPGMEWPGP Trigger: GGGGCCTGGCCACTCCATGCCTGGGGCTGCTTGAGACAGTGGGCACGCTTGCTCGGATTGACAAGGATGAACTGGGCAAAGCCATCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS GCA 90 bp | GCGCTTAAGGACAAGGATGGGTGTCCCCCGAGGACTCATGCCCAGTaGCACTTTCGAAGACACGTTCACCTCTGCGGCCAGCTGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: ALKDKDGCPPRTHAQ*HFRRHVHLCGQLQE Trigger: CTCCTGCAGCTGGCCGCAGAGGTGAACGTGTCTTCGAAAGTGGCACTGGGCATGAGTCCTCGGGGGACACCCATCCTTGTCCTTAAGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS GCA 90 bp | GTGCTGAGCAGGGGGCAGTTTCCCCAGGGCCTCAGGAGCCAAAGCTaGCAGGTCAGTAGTTGTCAGAGGGACATTCCTGGGAACCATCTC | + |
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Preference number: 5 (lower is better) Translates to: VLSRGQFPQGLRSQS*QVSSCQRDIPGNHL Trigger: GAGATGGTTCCCAGGAATGTCCCTCTGACAACTACTGACCTGGCAGCTTTGGCTCCTGAGGCCCTGGGGAAACTGCCCCCTGCTCAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS-3UTR CAA 90 bp | CAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCGAGTGGGACAGTCACTaGGGAGGTGTGGTCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QRARWARVGKGHLYCHQCEWDSH*GGVVLF Trigger: AAAGAGGACCACACCTCCCAAGTGACTGTCCCACTC...GCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS TCA 90 bp | AGCCCAAAGATTGGCGTGGGCAGCAGCCCTGACATCAGACTGATGTaGCCCAGGAGCGTGCTGCAGCGCTTAAGGACAAGGATGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPKIGVGSSPDIRLM*PRSVLQRLRTRMGV Trigger: GACACCCATCCTTGTCCTTAAGCGCTGCAGCACGCTCCTGGGTCACATCAGTCTGATGTCAGGGCTGCTGCCCACGCCAATCTTTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCTTGCCCAGTTCATCCTaGTCAATCCGAGCAAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QRARWARVGKGHLYCHQCLPSSS*SIRASV Trigger: CACGCTTGCTCGGATTGACAAGGATGAACTGGGCAA...GCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGCCATGCAGGCTAACCTaGGTGTGCAGGTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARVGKGHLYCHQCRLKTGPCRLT*VCRFSC Trigger: GCAGCTGAACCTGCACACCAAGGTTAGCCTGCATGG...CCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGGCAAGGTGGGCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGGAGACTGTGGCCTTCTaGTTCTGCAGCAGGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: TEGKVGPGGQGALILSPMETVAF*FCSRTM Trigger: CATGGTCCTGCTGCAGAACAAGAAGGCCACAGTCTC...CATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGCCCACCTTGCCCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS TCA 90 bp | CCTTGGTGTGCAGGTTCAGCTGCACCCCGACCCCCGGCAGCAGCTTaGGTGACACTTTGGGCAAAGTTAGTTCCTCTATCTTCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PWCAGSAAPRPPAAA*VTLWAKLVPLSSAQ Trigger: CTGGGCTGAAGATAGAGGAACTAACTTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGTCGGGGTGCAGCTGAACCTGCACACCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGTGGGCAGACAGATAGGACTCTGTAGTGAACAGGGAGAGCAGCAGCCAACCCCCGGCAGCAGCTaGAGTGACACTTTGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GRVGRQIGLCSEQGEQQPTPGSS*SDTLGK Trigger: TTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGT...TGGCTGCTGCTCTCCCTGTTCACTACAGAGTCCTATCTGTCTGCCCACTCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGGAGACTGTGGCCTTCTaGTTCTGCAGCAGGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: ARVGKGHLYCHQCRLKTGETVAF*FCSRTM Trigger: CATGGTCCTGCTGCAGAACAAGAAGGCCACAGTCTC...CCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GCCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGGGCTACAGGAGTTCCTaGAGGGACAGAAGACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARVGKGHLYCHQCRLKTGGYRSS*RDRRQH Trigger: GTGCTGTCTTCTGTCCCTCAAGGAACTCCTGTAGCC...CCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGGTGGGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGATGCATCAAAAGGTaGGGGAAAGGAGGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGWARGTYTVTNAGLRLGGCIKR*GKGGGQ Trigger: CTGGCCTCCTCCTTTCCCCAACCTTTTGATGCATCC...TCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCCCACCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CCA 90 bp | ACCACATCACTGAGCCATTCTTCCAGACGGGATGCATCAAAAGGTTaGGGAAAGGAGGAGGCCAGCTGGACACTTAGCCGTTCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTSLSHSSRRDASKG*GKEEASWTLSRSRD Trigger: GTCCCTGGAACGGCTAAGTGTCCAGCTGGCCTCCTCCTTTCCCCAACCTTTTGATGCATCCCGTCTGGAAGAATGGCTCAGTGATGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS GCA 90 bp | GAGGAGGCCAGCTGGACACTTAGCCGTTCCAGGGACAGAGATATGTaGAGCTTGGTAGAGGATGGAGCCAGGTGGGCATTTAGAGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: EEASWTLSRSRDRDM*SLVEDGARWAFRVI Trigger: TATGACTCTAAATGCCCACCTGGCTCCATCCTCTACCAAGCTGCACATATCTCTGTCCCTGGAACGGCTAAGTGTCCAGCTGGCCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCACCCCCGGCAGCAGCTaGAGTGACACTTTGGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGIEPRCYVLSEADQWLSTPGSS*SDTLGK Trigger: TTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGT...GGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGGAAACTAGTCCAGGCAGCACCTaGCACAGTGTCTGTTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: GKGHLYCHQCRLKTGRETSPGST*HSVCST Trigger: CGTAGAACAGACACTGTGCAAGGTGCTGCCTGGACT...AGTTTCCCTCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCGAGTGGGACAGTCACTaGGGAGGTGTGGTCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EPRCYVLSEADQWLSSHPEWDSH*GGVVLF Trigger: AAAGAGGACCACACCTCCCAAGTGACTGTCCCACTC...GGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCTTGCCCAGTTCATCCTaGTCAATCCGAGCAAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: EPRCYVLSEADQWLSSHPLPSSS*SIRASV Trigger: CACGCTTGCTCGGATTGACAAGGATGAACTGGGCAA...GGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACACTGGGATGCGTGGCTaGGGGAAATCAATGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: PRCYVLSEADQWLSSHPHTGMRG*GKSMTS Trigger: AGATGTCATTGATTTCCCCAAGCCACGCATCCCAGT...GTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCGGCTACAGGAGTTCCTaGAGGGACAGAAGACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGIEPRCYVLSEADQWLSGYRSS*RDRRQH Trigger: GTGCTGTCTTCTGTCCCTCAAGGAACTCCTGTAGCC...GGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGGGCACTTATACTGTCACCAATGCAGGCTTAAGACTGGGAGGGAAACTAGAGATATGTGCAGCTaGGTAGAGGATGGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKGHLYCHQCRLKTGRETRDMCS*VEDGAR Trigger: CCTGGCTCCATCCTCTACCAAGCTGCACATATCTCT...AGTTTCCCTCCCAGTCTTAAGCCTGCATTGGTGACAGTATAAGTGCCCCTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | TGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACCCCAAAAGAGATATGTGCAGCTaGGTAGAGGATGGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CYVLSEADQWLSSHPHPKRDMCS*VEDGAR Trigger: CCTGGCTCCATCCTCTACCAAGCTGCACATATCTCT...TTTGGGGTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCGGATGCATCAAAAGGTaGGGGAAAGGAGGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGIEPRCYVLSEADQWLSGCIKR*GKGGGQ Trigger: CTGGCCTCCTCCTTTCCCCAACCTTTTGATGCATCC...GGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAATCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | TTGAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCAGTCCAGGCAGCACCTaGCACAGTGTCTGTTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: LNQGAMCFLKQISGYPAISPGST*HSVCST Trigger: CGTAGAACAGACACTGTGCAAGGTGCTGCCTGGACT...GATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCACTGGGATGCGTGGCTaGGGGAAATCAATGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: EPRCYVLSEADQWLSSHPTGMRG*GKSMTS Trigger: AGATGTCATTGATTTCCCCAAGCCACGCATCCCAGT...GGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CCA 90 bp | TCCAGGGACAGAGATATGTGCAGCTTGGTAGAGGATGGAGCCAGGTaGGCATTTAGAGTCATAACCCCATTCAACTGGAAAAGGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: SRDRDMCSLVEDGAR*AFRVITPFNWKRAT Trigger: TGTAGCCCTTTTCCAGTTGAATGGGGTTATGACTCTAAATGCCCACCTGGCTCCATCCTCTACCAAGCTGCACATATCTCTGTCCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS TCA 90 bp | CGGAGCCACTGTGAGCACAACTGCATTCTCAATGATATCGACCACTaGATTGGCAAAGTTGACATTGAGAATCTTAGGCAGGGGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSHCEHNCILNDIDH*IGKVDIENLRQGNS Trigger: GGAATTCCCCTGCCTAAGATTCTCAATGTCAACTTTGCCAATTCAGTGGTCGATATCATTGAGAATGCAGTTGTGCTCACAGTGGCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | TGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCCACCCCAAAACTGAATTGGCAAAGTaGACATTGAGAATCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CYVLSEADQWLSSHPHPKTELAK*TLRILG Trigger: GCCTAAGATTCTCAATGTCAACTTTGCCAATTCAGT...TTTGGGGTGGGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS-3UTR CAA 90 bp | GAACCAAGGTGCTATGTGCTTTCTGAAGCAGATCAGTGGCTATCCAGCCATCCCACTGAATTGGCAAAGTaGACATTGAGAATCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPRCYVLSEADQWLSSHPTELAK*TLRILG Trigger: GCCTAAGATTCTCAATGTCAACTTTGCCAATTCAGT...GGGATGGCTGGATAGCCACTGATCTGCTTCAGAAAGCACATAGCACCTTGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS GCA 72 bp | GACAAGGATGGGTGTCCCCCGAGGACTCATGCCCAGTaGCACTTTCGAAGACACGTTCACCTCTGCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DKDGCPPRTHAQ*HFRRHVHLCGQ Trigger: CTGGCCGCAGAGGTGAACGTGTCTTCGAAAGTGGCACTGGGCATGAGTCCTCGGGGGACACCCATCCTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 90 bp | TGGAGACTGTGGCCTTCTTGTTCTGCAGCAGGACCATGGGCGATTTaGTCACCCGCAGCGAGAGCAGGAGGTGCTGAGCAGGGGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: WRLWPSCSAAGPWAI*SPAARAGGAEQGAV Trigger: AACTGCCCCCTGCTCAGCACCTCCTGCTCTCGCTGCGGGTGACAAAATCGCCCATGGTCCTGCTGCAGAACAAGAAGGCCACAGTCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS TCA 72 bp | ATTGGCGTGGGCAGCAGCCCTGACATCAGACTGATGTaGCCCAGGAGCGTGCTGCAGCGCTTAAGGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: IGVGSSPDIRLM*PRSVLQRLRTR Trigger: CCTTGTCCTTAAGCGCTGCAGCACGCTCCTGGGTCACATCAGTCTGATGTCAGGGCTGCTGCCCACGCCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 72 bp | TGGCCTTCTTGTTCTGCAGCAGGACCATGGGCGATTTaGTCACCCGCAGCGAGAGCAGGAGGTGCTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPSCSAAGPWAI*SPAARAGGAEQ Trigger: CTGCTCAGCACCTCCTGCTCTCGCTGCGGGTGACAAAATCGCCCATGGTCCTGCTGCAGAACAAGAAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS GCA 72 bp | CTTTGCCCAGTTCATCCTTGTCAATCCGAGCAAGCGTaGCCACTGTCTCAAGCAGCCCCAGGCATGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCPVHPCQSEQA*PLSQAAPGMEW Trigger: CCACTCCATGCCTGGGGCTGCTTGAGACAGTGGGCACGCTTGCTCGGATTGACAAGGATGAACTGGGCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 90 bp | ACCTTGGTGTGCAGGTTCAGCTGCACCCCGACCCCCGGCAGCAGCTaGAGTGACACTTTGGGCAAAGTTAGTTCCTCTATCTTCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLVCRFSCTPTPGSS*SDTLGKVSSSIFSP Trigger: TGGGCTGAAGATAGAGGAACTAACTTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGTCGGGGTGCAGCTGAACCTGCACACCAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 90 bp | GAAGACAGCACATGGATGGTGACTGGGATGGAGACTGTGGCCTTCTaGTTCTGCAGCAGGACCATGGGCGATTTTGTCACCCGCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: EDSTWMVTGMETVAF*FCSRTMGDFVTRSE Trigger: CTCGCTGCGGGTGACAAAATCGCCCATGGTCCTGCTGCAGAACAAGAAGGCCACAGTCTCCATCCCAGTCACCATCCATGTGCTGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS TCA 72 bp | GCAGGTTCAGCTGCACCCCGACCCCCGGCAGCAGCTTaGGTGACACTTTGGGCAAAGTTAGTTCCTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: AGSAAPRPPAAA*VTLWAKLVPLS Trigger: AGATAGAGGAACTAACTTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGTCGGGGTGCAGCTGAACCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS TCA 72 bp | GGGCACCGTTGGTTTGCAGGAGCCCAAACACGGTGCTaGAGAGATAGAGTGGGACAGTCACTTGGGAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GHRWFAGAQTRC*RDRVGQSLGRC Trigger: ACACCTCCCAAGTGACTGTCCCACTCTATCTCTTCAGCACCGTGTTTGGGCTCCTGCAAACCAACGGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS GCA 72 bp | TGTCTACCACAGGGCACAGCAGTCCAGGCAGCACCTTaGACAGTGTCTGTTCTACGAGCCCAAAGATTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CLPQGTAVQAAP*TVSVLRAQRLA Trigger: CGCCAATCTTTGGGCTCGTAGAACAGACACTGTGCAAGGTGCTGCCTGGACTGCTGTGCCCTGTGGTAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 72 bp | TGCACCCCGACCCCCGGCAGCAGCTTGAGTGACACTTaGGGCAAAGTTAGTTCCTCTATCTTCAGCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CTPTPGSSLSDT*GKVSSSIFSPE Trigger: CTCTGGGCTGAAGATAGAGGAACTAACTTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGTCGGGGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 72 bp | TGCAGGTTCAGCTGCACCCCGACCCCCGGCAGCAGCTaGAGTGACACTTTGGGCAAAGTTAGTTCCTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: CRFSCTPTPGSS*SDTLGKVSSSI Trigger: GATAGAGGAACTAACTTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGTCGGGGTGCAGCTGAACCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 72 bp | CTGTCTACCACAGGGCACAGCAGTCCAGGCAGCACCTaGCACAGTGTCTGTTCTACGAGCCCAAAGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSTTGHSSPGST*HSVCSTSPKIG Trigger: GCCAATCTTTGGGCTCGTAGAACAGACACTGTGCAAGGTGCTGCCTGGACTGCTGTGCCCTGTGGTAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 72 bp | CTCAGGGGTGATGTCCAGGTCAAGGGCACCGTTGGTTaGCAGGAGCCCAAACACGGTGCTGAAGAGATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRGDVQVKGTVG*QEPKHGAEEIE Trigger: CTCTATCTCTTCAGCACCGTGTTTGGGCTCCTGCAAACCAACGGTGCCCTTGACCTGGACATCACCCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 90 bp | AGGTTCAGCTGCACCCCGACCCCCGGCAGCAGCTTGAGTGACACTTaGGGCAAAGTTAGTTCCTCTATCTTCAGCCCAGAGAGTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFSCTPTPGSSLSDT*GKVSSSIFSPESSS Trigger: GGAAGAACTCTCTGGGCTGAAGATAGAGGAACTAACTTTGCCCAAAGTGTCACTCAAGCTGCTGCCGGGGGTCGGGGTGCAGCTGAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS TCA 72 bp | TTGTCAGAGGGACATTCCTGGGAACCATCTCAGGGGTaGTGTCCAGGTCAAGGGCACCGTTGGTTTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSEGHSWEPSQG*CPGQGHRWFAG Trigger: TCCTGCAAACCAACGGTGCCCTTGACCTGGACATCACCCCTGAGATGGTTCCCAGGAATGTCCCTCTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 90 bp | GCCAGCTGGACACTTAGCCGTTCCAGGGACAGAGATATGTGCAGCTaGGTAGAGGATGGAGCCAGGTGGGCATTTAGAGTCATAACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASWTLSRSRDRDMCS*VEDGARWAFRVITP Trigger: TGGGGTTATGACTCTAAATGCCCACCTGGCTCCATCCTCTACCAAGCTGCACATATCTCTGTCCCTGGAACGGCTAAGTGTCCAGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS GCA 72 bp | AGCTGGACACTTAGCCGTTCCAGGGACAGAGATATGTaGAGCTTGGTAGAGGATGGAGCCAGGTGGGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SWTLSRSRDRDM*SLVEDGARWAF Trigger: AAATGCCCACCTGGCTCCATCCTCTACCAAGCTGCACATATCTCTGTCCCTGGAACGGCTAAGTGTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CCA 72 bp | TCCTTGAGGGACAGAAGACAGCACATGGATGGTGACTaGGATGGAGACTGTGGCCTTCTTGTTCTGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLRDRRQHMDGD*DGDCGLLVLQQ Trigger: CTGCTGCAGAACAAGAAGGCCACAGTCTCCATCCCAGTCACCATCCATGTGCTGTCTTCTGTCCCTCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
||
| CDS CAA 72 bp | ACTAGGGAGTTCTGGATGGCTTTGCCCAGTTCATCCTaGTCAATCCGAGCAAGCGTGCCCACTGTCTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TREFWMALPSSS*SIRASVPTVSS Trigger: GCTTGAGACAGTGGGCACGCTTGCTCGGATTGACAAGGATGAACTGGGCAAAGCCATCCAGAACTCCCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS CAA 72 bp | ACATGGATGGTGACTGGGATGGAGACTGTGGCCTTCTaGTTCTGCAGCAGGACCATGGGCGATTTTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: TWMVTGMETVAF*FCSRTMGDFVT Trigger: GGTGACAAAATCGCCCATGGTCCTGCTGCAGAACAAGAAGGCCACAGTCTCCATCCCAGTCACCATCCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS CCA 72 bp | ACGTTTTGCAGAATAGGGCCCCCAACTAGGGAGTTCTaGATGGCTTTGCCCAGTTCATCCTTGTCAATCCGA | + |
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Preference number: 6 (lower is better) Translates to: TFCRIGPPTREF*MALPSSSLSIR Trigger: TCGGATTGACAAGGATGAACTGGGCAAAGCCATCCAGAACTCCCTAGTTGGGGGCCCTATTCTGCAAAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS CAA 90 bp | ACTGCATTCTCAATGATATCGACCACTGAATTGGCAAAGTTGACATaGAGAATCTTAGGCAGGGGAATTCCAACCTCCAGGTGCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: TAFSMISTTELAKLT*RILGRGIPTSRCSL Trigger: CAACGAGCACCTGGAGGTTGGAATTCCCCTGCCTAAGATTCTCAATGTCAACTTTGCCAATTCAGTGGTCGATATCATTGAGAATGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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| CDS CAA 90 bp | AGCACAACTGCATTCTCAATGATATCGACCACTGAATTGGCAAAGTaGACATTGAGAATCTTAGGCAGGGGAATTCCAACCTCCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: STTAFSMISTTELAK*TLRILGRGIPTSRC Trigger: GCACCTGGAGGTTGGAATTCCCCTGCCTAAGATTCTCAATGTCAACTTTGCCAATTCAGTGGTCGATATCATTGAGAATGCAGTTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088950.8 ENSMUST00000109760.2 |
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