Pregenerated sensors for BPIFB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027481Ensembl transcript IDs: ENSMUST00000028983.3
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CATCCAGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGACTCTGTCCTCAGGCTTaGGGACAAAAGCCTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: HPVASSPGGGIRRGEETRLCPQA*GQKPLE Trigger: CTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAG...TCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACTGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| 3UTR TCA 72 bp | AGACCAAACAGGCTGGCTGACTTGCTGATGATGACTTaGTGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: RPNRLADLLMMT*CGSVLRLGDKS Trigger: GCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAAGTCATCATCAGCAAGTCAGCCAGCCTGTTTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| 3UTR CCA 72 bp | GCTGATGATGACTTGATGCGGCTCTGTCCTCAGGCTTaGGGACAAAAGCCTCTTGAGGAACTGGCTCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: ADDDLMRLCPQA*GQKPLEELALV Trigger: CACAAGAGCCAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAAGTCATCATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | GACTTGATGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAACTGGAGCCACCTCAGGGATaGGCTGGCCCAGCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: DLMRLCPQAWGQKPLEELEPPQG*AGPAQR Trigger: CCTCTGTGCTGGGCCAGCTCATCCCTGAGGTGGCTC...CAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | AGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGTGCTGGTGTGGAGAGTaGCCACGGGTGTGGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SSLLPRRGHKKRRGNKRGCWCGE*PRVWHP Trigger: TGGGTGCCACACCCGTGGTCACTCTCCACACCAGCA...CCCTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | AACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTGGACCTGCAGGGCCCGCTaGAGAGGGGCTTTCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: NKRGTQVSSKGEADQTGWTCRAR*RGAFPM Trigger: CATTGGGAAAGCCCCTCTCCAGCGGGCCCTGCAGGT...CCAGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | CCAGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGCAGGGCCCACAGGACTaGGGCCGATTAAAGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PVASSPGGGIRRGEETREQGPQD*GRLKCP Trigger: TGGGCACTTTAATCGGCCTCAGTCCTGTGGGCCCTG...CTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | AACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTGGGAGTCCCGGGCCACGTaGACATCAGCCAGCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: NKRGTQVSSKGEADQTGWESRAT*TSASKS Trigger: AGACTTGCTGGCTGATGTGCACGTGGCCCGGGACTC...CCAGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | AGGAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGGCATGCCGGCTGGACTaGAGATGGAAGAGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RKQERDAGVQQRGSRPNRACRLD*RWKSRQ Trigger: CTGCCTGCTCTTCCATCTTCAGTCCAGCCGGCATGC...CCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | GAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTTCAGAGATAGTGACCTaGAGGGCCCGCTGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ETREGRRCPAKGKQTKQASEIVT*RARWRG Trigger: CCCTCTCCAGCGGGCCCTGCAGGTCACTATCTCTGA...AGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | CCAGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGAGGTCAGCTTTGATGTaGTCCTGCACCCGGTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PVASSPGGGIRRGEETRERSALM*SCTRSS Trigger: GCTCGACCGGGTGCAGGAGCACATCAAAGCTGACCT...CTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | CCAGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGTGTGGCACCCAGCTaGACCTTGAGTACCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PVASSPGGGIRRGEETREGVAPS*TLSTSG Trigger: ACCACTGGTACTCAAGGTGCAGCTGGGTGCCACACC...CTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | GGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAACTGGCTCTTGTGGACCAAGGGCTGCAGCTaGAGAGTGGAGTTGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GSVLRLGDKSLLRNWLLWTKGCS*RVELLV Trigger: CACCAGCAACTCCACTCTCCAGCTGCAGCCCTTGGT...CCACAAGAGCCAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | GAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTAGAGAGCCAGCCTTCTaGAGCATCAGGAGGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: ETREGRRCPAKGKQTKQAREPAF*SIRRAQ Trigger: CTGTGCCCTCCTGATGCTTCAGAAGGCTGGCTCTCT...AGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | GAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTACCTCCACCAAGGGCTaGAGCTGGAGAGTGGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: ETREGRRCPAKGKQTKQATSTKG*SWRVEL Trigger: CAACTCCACTCTCCAGCTGCAGCCCTTGGTGGAGGT...AGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | TTGATGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAACTGGCTCAGTCAAACAGGTGCTaGGAGAGCCCCACAGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LMRLCPQAWGQKPLEELAQSNRC*ESPTVA Trigger: GGCAACTGTGGGGCTCTCCCAGCACCTGTTTGACTG...AGCCAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | GACTTGATGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAACTGGCACAGTCAAACAGGTaGTGGGAGAGCCCCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: DLMRLCPQAWGQKPLEELAQSNR*WESPTV Trigger: AACTGTGGGGCTCTCCCAGCACCTGTTTGACTGTGC...CAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | AAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTGCCCGAAGCTTCGCCTTaGACACAGAGAGCTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: KQERDAGVQQRGSRPNRLPEASP*TQRAEG Trigger: ACCTTCAGCTCTCTGTGTCCAAGGCGAAGCTTCGGG...CAGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | GGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGAGCCCACATTGGAGGTaGCCACAGAGAGCTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: GGIRRGEETREGRRCPAKSPHWR*PQRAGI Trigger: GATTCCAGCTCTCTGTGGCCACCTCCAATGTGGGCT...CTTTGCTGGACACCTGCGTCCCTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | GAGGAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGCAACAGAGCCCACATTaGAGGTGGCCACAGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: EETREGRRCPAKGKQTKQQQSPH*RWPQRA Trigger: AGCTCTCTGTGGCCACCTCCAATGTGGGCTCTGTTG...CTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | GAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTTTGGACACAGAGAGCTaGAGGTCCAGGTTCACCATC | + |
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Preference number: 4 (lower is better) Translates to: ETREGRRCPAKGKQTKQALDTES*RSRFTI Trigger: GATGGTGAACCTGGACCTTCAGCTCTCTGTGTCCAA...AGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | GGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGAGGAGAGCATTGAGATaGTCCAGCAGGGGTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GGIRRGEETREGRRCPAKRRALR*SSRGFW Trigger: CCAGAAACCCCTGCTGGATCATCTCAATGCTCTCCT...CTTTGCTGGACACCTGCGTCCCTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | AAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTGATCCAGCATGCCGGCTaGACTGAAGATGGAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KQERDAGVQQRGSRPNRLIQHAG*TEDGRA Trigger: TGCTCTTCCATCTTCAGTCCAGCCGGCATGCTGGAT...CAGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | AGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGCGACACATAATCCAATaGTGCCTTGTTGAGTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: SSLLPRRGHKKRRGNKRGRHIIQ*CLVESD Trigger: GTCCGACTCAACAAGGCAGCATTGGATTATGTGTCG...CCCTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | AAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTGCACATAATCCAATGCTaGCTTGTTGAGTCGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: KQERDAGVQQRGSRPNRLHIIQC*LVESDH Trigger: GTGGTCCGACTCAACAAGGCAGCATTGGATTATGTG...CAGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | AGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGTTCTTCGAATTCAGCTaGCCTGTGATTTCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SSLLPRRGHKKRRGNKRGFFEFS*PVISRL Trigger: CAACCTGGAAATCACAGGGCAGCTGAATTCGAAGAA...CCCTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR GCA 90 bp | GAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTAGGGAGAAAAGGAACTaGAAGGCTAAGTTCGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: ETREGRRCPAKGKQTKQAREKRN*KAKFEG Trigger: ACCCTCGAACTTAGCCTTGCAGTTCCTTTTCTCCCT...AGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | AAGACATTTAATGCTGAGGGAAGCAGGTCTGCACAGCTTACATCCAGTAGCCTCGCCCCACAGTTGCCATaGCTCCTGCATCACCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: KTFNAEGSRSAQLTSSSLAPQLP*LLHHPK Trigger: CTTTGGGTGATGCAGGAGCCATGGCAACTGTGGGGC...GAGGCTACTGGATGTAAGCTGTGCAGACCTGCTTCCCTCAGCATTAAATGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | AAGACATTTAATGCTGAGGGAAGCAGGTCTGCACAGCTTACATCCAGTAGCCTCGTAGATTGTGCACCCTaGGGAGGACAACCCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: KTFNAEGSRSAQLTSSSLVDCAP*GGQPPC Trigger: GCATGGGGGTTGTCCTCCCCAGGGTGCACAATCTAC...GAGGCTACTGGATGTAAGCTGTGCAGACCTGCTTCCCTCAGCATTAAATGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | TTGATGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAACTGGCTCCCCAAAACCAGCAATaGACTTCAAGTAGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LMRLCPQAWGQKPLEELAPQNQQ*TSSRRR Trigger: CCTTCTTCTACTTGAAGTTCATTGCTGGTTTTGGGG...AGCCAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR TCA 90 bp | GATGACTTGATGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAAATTAAAGTGCCCAAGTaGACATTGAGATCCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: DDLMRLCPQAWGQKPLEEIKVPK*TLRSWT Trigger: GGTCCAGGATCTCAATGTTCACTTGGGCACTTTAAT...TTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAAGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CCA 90 bp | GACTTGATGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAACTGCAAGAAGAGAGAGAATaGCTCCGATATCTAGGGATA | + |
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Preference number: 4 (lower is better) Translates to: DLMRLCPQAWGQKPLEELQEERE*LRYLGI Trigger: TATCCCTAGATATCGGAGCCATTCTCTCTCTTCTTG...CAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CCA 90 bp | GAGAGTGACCACGGGTGTGGCACCCAGCTGCACCTTGAGTACCAGTaGTGTAGGCTCAGGGAACAGGTGAGCCACCTCAGGGATGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: ESDHGCGTQLHLEYQ*CRLREQVSHLRDEL Trigger: CAGCTCATCCCTGAGGTGGCTCACCTGTTCCCTGAGCCTACACCACTGGTACTCAAGGTGCAGCTGGGTGCCACACCCGTGGTCACTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CCA 90 bp | GAGCAGCTCCTGGGAGGTACTGATACTGCCATCCAGCATGCCGGCTaGACTGAAGATGGAAGAGCAGGCAGGGACGCTGAGCACAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: EQLLGGTDTAIQHAG*TEDGRAGRDAEHKG Trigger: ACCCTTGTGCTCAGCGTCCCTGCCTGCTCTTCCATCTTCAGTCCAGCCGGCATGCTGGATGGCAGTATCAGTACCTCCCAGGAGCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CCA 90 bp | GGAGGGCACAGTCAAACAGGTGCTGGGAGAGCCCCACAGTTGCCATaGCTCCTGCATCACCCAAAGGCCATGGCAACACAAAGGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: GGHSQTGAGRAPQLP*LLHHPKAMATQRGE Trigger: CTCACCCCTTTGTGTTGCCATGGCCTTTGGGTGATGCAGGAGCCATGGCAACTGTGGGGCTCTCCCAGCACCTGTTTGACTGTGCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 90 bp | CATCAGGAGGGCACAGTCAAACAGGTGCTGGGAGAGCCCCACAGTTaGCATGGCTCCTGCATCACCCAAAGGCCATGGCAACACAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: HQEGTVKQVLGEPHS*HGSCITQRPWQHKG Trigger: CCCTTTGTGTTGCCATGGCCTTTGGGTGATGCAGGAGCCATGGCAACTGTGGGGCTCTCCCAGCACCTGTTTGACTGTGCCCTCCTGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 90 bp | TGCAAGGCTAAGTTCGAGGGTGCAGCAAAGACCTCCACCAAGGGCTaGAGCTGGAGAGTGGAGTTGCTGGTGTGGAGAGTGACCACGGGT | + |
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Preference number: 5 (lower is better) Translates to: CKAKFEGAAKTSTKG*SWRVELLVWRVTTG Trigger: ACCCGTGGTCACTCTCCACACCAGCAACTCCACTCTCCAGCTGCAGCCCTTGGTGGAGGTCTTTGCTGCACCCTCGAACTTAGCCTTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | CATCCAGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGGGAGAGCCCCACAGTaGCCATGGCTCCTGCATCAC | + |
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Preference number: 5 (lower is better) Translates to: HPVASSPGGGIRRGEETRGRAPQ*PWLLHH Trigger: GTGATGCAGGAGCCATGGCAACTGTGGGGCTCTCCC...TCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACTGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 90 bp | ACAGTCAAACAGGTGCTGGGAGAGCCCCACAGTTGCCATGGCTCCTaGATCACCCAAAGGCCATGGCAACACAAAGGGGTGAGCACCATG | + |
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Preference number: 5 (lower is better) Translates to: TVKQVLGEPHSCHGS*ITQRPWQHKGVSTM Trigger: CATGGTGCTCACCCCTTTGTGTTGCCATGGCCTTTGGGTGATGCAGGAGCCATGGCAACTGTGGGGCTCTCCCAGCACCTGTTTGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | TTGATGCGGCTCTGTCCTCAGGCTTGGGGACAAAAGCCTCTTGAGGAACTGGCTGCACCCAGCTGCACCTaGAGTACCAGTGGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: LMRLCPQAWGQKPLEELAAPSCT*STSGVG Trigger: GCCTACACCACTGGTACTCAAGGTGCAGCTGGGTGC...AGCCAGTTCCTCAAGAGGCTTTTGTCCCCAAGCCTGAGGACAGAGCCGCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | AACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGCTGGTCAACAGAGCCCACATaGGAGGTGGCCACAGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: NKRGTQVSSKGEADQTGWSTEPT*EVATES Trigger: GCTCTCTGTGGCCACCTCCAATGTGGGCTCTGTTGA...CCAGCCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 90 bp | GCCATGGCTCCTGCATCACCCAAAGGCCATGGCAACACAAAGGGGTaGGCACCATGCATAGGCAGGAGGATGGGTTTGCCAAGAAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: AMAPASPKGHGNTKG*APCIGRRMGLPRRE Trigger: CTCTCTTCTTGGCAAACCCATCCTCCTGCCTATGCATGGTGCTCACCCCTTTGTGTTGCCATGGCCTTTGGGTGATGCAGGAGCCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 90 bp | GAATTCAGCTGCCCTGTGATTTCCAGGTTGAGAGAGCCAGCCTTCTaGAGCATCAGGAGGGCACAGTCAAACAGGTGCTGGGAGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: EFSCPVISRLREPAF*SIRRAQSNRCWESP Trigger: GGGGCTCTCCCAGCACCTGTTTGACTGTGCCCTCCTGATGCTTCAGAAGGCTGGCTCTCTCAACCTGGAAATCACAGGGCAGCTGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 90 bp | AGCAGAGATGTGCTCCCCCGAAGCTTCGCCTTGGACACAGAGAGCTaGAGGTCCAGGTTCACCATCACATCCAGGGAGAAAAGGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: SRDVLPRSFALDTES*RSRFTITSREKRNC Trigger: GCAGTTCCTTTTCTCCCTGGATGTGATGGTGAACCTGGACCTTCAGCTCTCTGTGTCCAAGGCGAAGCTTCGGGGGAGCACATCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | AGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGGGCAGGAGGATGGGTTaGCCAAGAAGAGAGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: SSLLPRRGHKKRRGNKRGGRRMG*PRRERM Trigger: CATTCTCTCTCTTCTTGGCAAACCCATCCTCCTGCC...CCCTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | AGGAAACAAGAGAGGGACGCAGGTGTCCAGCAAAGGGGAAGCAGACCAAACAGGTCCAATGCTGCCTTGTaGAGTCGGACCACAATGACA | + |
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Preference number: 5 (lower is better) Translates to: RKQERDAGVQQRGSRPNRSNAAL*SRTTMT Trigger: TGTCATTGTGGTCCGACTCAACAAGGCAGCATTGGA...CCTGTTTGGTCTGCTTCCCCTTTGCTGGACACCTGCGTCCCTCTCTTGTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | AGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGAGAGGGTGCAAGCACAGCTTGTaGTTTAGGTCAGCTTTGATG | + |
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Preference number: 5 (lower is better) Translates to: SSLLPRRGHKKRRGNKRGCKHSL*FRSALM Trigger: CATCAAAGCTGACCTAAACAACAAGCTGTGCTTGCA...CCCTCTCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | AAGACATTTAATGCTGAGGGAAGCAGGTCTGCACAGCTTACATCCAGTAGCCTCAGCTGGAGAGTGGAGTaGCTGGTGTGGAGAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: KTFNAEGSRSAQLTSSSLSWRVE*LVWRVT Trigger: GGTCACTCTCCACACCAGCAACTCCACTCTCCAGCT...GAGGCTACTGGATGTAAGCTGTGCAGACCTGCTTCCCTCAGCATTAAATGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 90 bp | TCCAGCAGGGGTTTCTGGAATACGGTGCTTATGAGTGTGAGTACTTaGTCCATATCAACAGAGCCCACATTGGAGGTGGCCACAGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SSRGFWNTVLMSVST*SISTEPTLEVATES Trigger: GCTCTCTGTGGCCACCTCCAATGTGGGCTCTGTTGATATGGATCAAGTACTCACACTCATAAGCACCGTATTCCAGAAACCCCTGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS-3UTR CAA 90 bp | CATCCAGTAGCCTCCTCCCCAGGAGGGGGCATAAGAAGAGGAGAGGAAACAAGATATGAGTGTGAGTACTaGATCCATATCAACAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: HPVASSPGGGIRRGEETRYECEY*IHINRA Trigger: GGCTCTGTTGATATGGATCAAGTACTCACACTCATA...TCTTGTTTCCTCTCCTCTTCTTATGCCCCCTCCTGGGGAGGAGGCTACTGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 90 bp | GAAGAGAGAGAATGGCTCCGATATCTAGGGATATATAGTTACTGGTaGTGGTGGGCATGCTGGTTATGGAGTAGCGGATCTGGGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: EEREWLRYLGIYSYW*WWACWLWSSGSGTQ Trigger: CTGAGTCCCAGATCCGCTACTCCATAACCAGCATGCCCACCATCACCAGTAACTATATATCCCTAGATATCGGAGCCATTCTCTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CAA 90 bp | GGTGCAGCAAAGACCTCCACCAAGGGCTGCAGCTGGAGAGTGGAGTaGCTGGTGTGGAGAGTGACCACGGGTGTGGCACCCAGCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: GAAKTSTKGCSWRVE*LVWRVTTGVAPSCT Trigger: GGTGCAGCTGGGTGCCACACCCGTGGTCACTCTCCACACCAGCAACTCCACTCTCCAGCTGCAGCCCTTGGTGGAGGTCTTTGCTGCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 72 bp | CTGAGCACAAGGGTCCCAATAGAGTCCCGGGCCACGTaGACATCAGCCAGCAAGTCTACAGGCAGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSTRVPIESRAT*TSASKSTGSTS Trigger: GCTGGTGCTGCCTGTAGACTTGCTGGCTGATGTGCACGTGGCCCGGGACTCTATTGGGACCCTTGTGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 72 bp | CTGGTGTGGAGAGTGACCACGGGTGTGGCACCCAGCTaGACCTTGAGTACCAGTGGTGTAGGCTCAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LVWRVTTGVAPS*TLSTSGVGSGN Trigger: GTTCCCTGAGCCTACACCACTGGTACTCAAGGTGCAGCTGGGTGCCACACCCGTGGTCACTCTCCACACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CCA 72 bp | CTGGGAGGTACTGATACTGCCATCCAGCATGCCGGCTaGACTGAAGATGGAAGAGCAGGCAGGGACGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LGGTDTAIQHAG*TEDGRAGRDAE Trigger: CTCAGCGTCCCTGCCTGCTCTTCCATCTTCAGTCCAGCCGGCATGCTGGATGGCAGTATCAGTACCTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CCA 72 bp | CCCCCAGCAGAGATGTGCTCCCCCGAAGCTTCGCCTTaGACACAGAGAGCTGAAGGTCCAGGTTCACCATCA | + |
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Preference number: 6 (lower is better) Translates to: PPAEMCSPEASP*TQRAEGPGSPS Trigger: TGATGGTGAACCTGGACCTTCAGCTCTCTGTGTCCAAGGCGAAGCTTCGGGGGAGCACATCTCTGCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 72 bp | CCTGCATCACCCAAAGGCCATGGCAACACAAAGGGGTaGGCACCATGCATAGGCAGGAGGATGGGTTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PASPKGHGNTKG*APCIGRRMGLP Trigger: TGGCAAACCCATCCTCCTGCCTATGCATGGTGCTCACCCCTTTGTGTTGCCATGGCCTTTGGGTGATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 72 bp | GTGCTCCCCCGAAGCTTCGCCTTGGACACAGAGAGCTaGAGGTCCAGGTTCACCATCACATCCAGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VLPRSFALDTES*RSRFTITSREK Trigger: TTTCTCCCTGGATGTGATGGTGAACCTGGACCTTCAGCTCTCTGTGTCCAAGGCGAAGCTTCGGGGGAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS TCA 72 bp | TGCCCTGTGATTTCCAGGTTGAGAGAGCCAGCCTTCTaGAGCATCAGGAGGGCACAGTCAAACAGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CPVISRLREPAF*SIRRAQSNRCW Trigger: CCAGCACCTGTTTGACTGTGCCCTCCTGATGCTTCAGAAGGCTGGCTCTCTCAACCTGGAAATCACAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 72 bp | TGCAAGCACAGCTTGTTGTTTAGGTCAGCTTTGATGTaGTCCTGCACCCGGTCGAGCAGCTCCTGGGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: CKHSLLFRSALM*SCTRSSSSWEV Trigger: TACCTCCCAGGAGCTGCTCGACCGGGTGCAGGAGCACATCAAAGCTGACCTAAACAACAAGCTGTGCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 72 bp | CACAGCTTGTTGTTTAGGTCAGCTTTGATGTGCTCCTaGACCCGGTCGAGCAGCTCCTGGGAGGTACTGATA | + |
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Preference number: 6 (lower is better) Translates to: HSLLFRSALMCS*TRSSSSWEVLI Trigger: TATCAGTACCTCCCAGGAGCTGCTCGACCGGGTGCAGGAGCACATCAAAGCTGACCTAAACAACAAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 72 bp | TCCAGGTTCACCATCACATCCAGGGAGAAAAGGAACTaGAAGGCTAAGTTCGAGGGTGCAGCAAAGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRFTITSREKRN*KAKFEGAAKTS Trigger: GGAGGTCTTTGCTGCACCCTCGAACTTAGCCTTGCAGTTCCTTTTCTCCCTGGATGTGATGGTGAACCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CCA 72 bp | CAGCAAGTCTACAGGCAGCACCAGCTCCATGGGCTCTaGGACACTAAAGACTTTGATGGTGAAATTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QQVYRQHQLHGL*DTKDFDGEIGC Trigger: GCAGCCAATTTCACCATCAAAGTCTTTAGTGTCCCAGAGCCCATGGAGCTGGTGCTGCCTGTAGACTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CAA 90 bp | TCTACAGGCAGCACCAGCTCCATGGGCTCTGGGACACTAAAGACTTaGATGGTGAAATTGGCTGCGGCTGATAAATGTACCCCAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: STGSTSSMGSGTLKT*MVKLAAADKCTPKP Trigger: TGGTTTTGGGGTACATTTATCAGCCGCAGCCAATTTCACCATCAAAGTCTTTAGTGTCCCAGAGCCCATGGAGCTGGTGCTGCCTGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CAA 90 bp | ATCCAGCAGGGGTTTCTGGAATACGGTGCTTATGAGTGTGAGTACTaGATCCATATCAACAGAGCCCACATTGGAGGTGGCCACAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: IQQGFLEYGAYECEY*IHINRAHIGGGHRE Trigger: CTCTCTGTGGCCACCTCCAATGTGGGCTCTGTTGATATGGATCAAGTACTCACACTCATAAGCACCGTATTCCAGAAACCCCTGCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS GCA 72 bp | ACAGAGGTGTTCAGAGGATTGTTCTTCGAATTCAGCTaGCCTGTGATTTCCAGGTTGAGAGAGCCAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TEVFRGLFFEFS*PVISRLREPAF Trigger: GAAGGCTGGCTCTCTCAACCTGGAAATCACAGGGCAGCTGAATTCGAAGAACAATCCTCTGAACACCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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| CDS CAA 72 bp | AGCACCAGCTCCATGGGCTCTGGGACACTAAAGACTTaGATGGTGAAATTGGCTGCGGCTGATAAATGTACC | + |
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Preference number: 6 (lower is better) Translates to: STSSMGSGTLKT*MVKLAAADKCT Trigger: GGTACATTTATCAGCCGCAGCCAATTTCACCATCAAAGTCTTTAGTGTCCCAGAGCCCATGGAGCTGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028983.3 |
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