Pregenerated sensors for BPIFB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027485Ensembl transcript IDs: ENSMUST00000028987.7, ENSMUST00000081816.11
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGGGTAGTCTACACAGTAGGCTTCCACACTCCTGGCTaGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: GVVYTVGFHTPG*DLAGAGCYCPG Trigger: ACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACTACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGCCTCACGGTCAGGCTaGAGGGGGCCCTGTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGASRSG*RGPCLG Trigger: CCCCAGACAGGGCCCCCTTCAGCCTGACCGTGAGGC...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | AGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCGCCTCACGGTCAGGCTaGAGGGGGCCCTGTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SRLPHSWLGPGRGWLLLSASRSG*RGPCLG Trigger: CCCCAGACAGGGCCCCCTTCAGCCTGACCGTGAGGC...GGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | AGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCTCCTCTCCACCCGGATaGGGGCTTGGACCTCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SRLPHSWLGPGRGWLLLSSSPPG*GLGPRC Trigger: GCACCGAGGTCCAAGCCCTCATCCGGGTGGAGAGGA...GGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGTCCAGCACGACACTTTaGGCTGCCCTGGCACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGASSTTL*AALALP Trigger: GGGCAGTGCCAGGGCAGCCCAAAGTGTCGTGCTGGA...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCACGAAGGAGAGCTTGTaGAGCAGGCTGAGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGTKESL*SRLRRR Trigger: CCTGCGCCTCAGCCTGCTTCACAAGCTCTCCTTCGT...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGGCCCTGTCTGGGGTaGTCTCCATCAGAGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGAGPCLG*SPSEKS Trigger: CGACTTCTCTGATGGAGACCACCCCAGACAGGGCCC...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGCACTTTGGGCTGCCCTaGCACTGCCCTCGTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGAHFGLP*HCPRSA Trigger: TGCTGAACGAGGGCAGTGCCAGGGCAGCCCAAAGTG...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGCTTCTGGGCCAAGGTTaGGCACTGCAGGGGGATAGA | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGALLGQG*ALQGDR Trigger: TCTATCCCCCTGCAGTGCTCAACCTTGGCCCAGAAG...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | CACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGGCTTGTGAAGCAGGCTaGGGCGCAGGGTGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: HSRLPHSWLGPGRGWLLLACEAG*GAGCSH Trigger: ATGAGAGCACCCTGCGCCTCAGCCTGCTTCACAAGC...CAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | CACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGACGAAGGAGAGCTTGTaGAGCAGGCTGAGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HSRLPHSWLGPGRGWLLLTKESL*SRLRRR Trigger: CCTGCGCCTCAGCCTGCTTCACAAGCTCTCCTTCGT...CAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR GCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGCATTCACCAGGTCCTaGCTCACGGTCAGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGAFTRS*LTVRLK Trigger: CTTCAGCCTGACCGTGAGGCAGGACCTGGTGAATGC...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGAGCAGTGGCAACTCCTaGAGGATGGCAGTGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: GTWPGLAATVQVFIRRGGSSGNS*RMAVAS Trigger: TGATGCCACTGCCATCCTCCAGGAGTTGCCACTGCT...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGGGCTGCACATCCAGCTaGAGGATGTTAGCAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GTWPGLAATVQVFIRRGGGCTSS*RMLAEV Trigger: CACCTCTGCTAACATCCTCCAGCTGGATGTGCAGCC...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTTCCAGCACGACACTTTaGGCTGCCCTGGCACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCSSTTL*AALALP Trigger: GGGCAGTGCCAGGGCAGCCCAAAGTGTCGTGCTGGA...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | AGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCCTTCTGGGCCAAGGTTaGGCACTGCAGGGGGATAGA | + |
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Preference number: 4 (lower is better) Translates to: SRLPHSWLGPGRGWLLLSLLGQG*ALQGDR Trigger: TCTATCCCCCTGCAGTGCTCAACCTTGGCCCAGAAG...GGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCTCATCAAAGGCCTGCTaGATCACAGGGCACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGSSKAC*ITGHRW Trigger: CCACCTGTGCCCTGTGATCCAGCAGGCCTTTGATGA...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGGGGCCCTGTCTGGGGTaGTCTCCATCAGAGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLGPCLG*SPSEKS Trigger: CGACTTCTCTGATGGAGACCACCCCAGACAGGGCCC...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGTCGTTCAGCACAATGTaGGGGGTGCTGTGGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGASFSTM*GVLWVK Trigger: CTTCACCCACAGCACCCCCCACATTGTGCTGAACGA...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCACTTTGGGCTGCCCTaGCACTGCCCTCGTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCHFGLP*HCPRSA Trigger: TGCTGAACGAGGGCAGTGCCAGGGCAGCCCAAAGTG...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTATGTCCAGGGGGATTCTaGCCACCAGCTCCTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLCPGGF*PPAPGH Trigger: ATGACCAGGAGCTGGTGGTCAGAATCCCCCTGGACA...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTTGTCCAGGGGGATTCTaGCCACCAGCTCCTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCCPGGF*PPAPGH Trigger: ATGACCAGGAGCTGGTGGTCAGAATCCCCCTGGACA...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR GCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGGCTTGGACCTCGGTaGTCATTTGGAACTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGAGLGPR*SFGTPL Trigger: TAGTGGAGTTCCAAATGAGCACCGAGGTCCAAGCCC...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR GCA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTAGCATTCACCAGGTCCTaGCTCACGGTCAGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLAFTRS*LTVRLK Trigger: CTTCAGCCTGACCGTGAGGCAGGACCTGGTGAATGC...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR GCA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGCCCCAGCTTGTTGGCTaGCTCTGCATTGATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GTWPGLAATVQVFIRRGGPQLVG*LCIDFL Trigger: AAGGAAATCAATGCAGAGGCAGCCAACAAGCTGGGG...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCTGGTCCTTCAGTGCCTaGGTCAGGTGTTTCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGWSFSA*VRCFWM Trigger: CATCCAGAAACACCTGACCCAGGCACTGAAGGACCA...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGTGGTTTTTCACTATTTaGGGCAGGGCTGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGAWFFTI*GRAGTR Trigger: CCTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCA...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCTGGTTTTTCACTATTTaGGGCAGGGCTGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGWFFTI*GRAGTR Trigger: CCTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCA...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCTTACAAGCTCCTCCTTaGGGACCAGGGTGGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGLQAPP*GPGWSQ Trigger: TTGTGACCACCCTGGTCCCCAAGGAGGAGCTTGTAA...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCTTCAACATCTGGGTaGGCCCCAGCTTGTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HSRLPHSWLGPGRGWLLLSSTSG*APACWL Trigger: CAGCCAACAAGCTGGGGCCCACCCAGATGTTGAAGA...CAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGCGTATCCCAAGGCCTTaGACATTGACATGGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGARIPRP*TLTWGL Trigger: GAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACG...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR GCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCCCCCAGCTTGTTGGCTaGCTCTGCATTGATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGPQLVG*LCIDFL Trigger: AAGGAAATCAATGCAGAGGCAGCCAACAAGCTGGGG...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTAGCAGTGGCAACTCCTaGAGGATGGCAGTGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCSSGNS*RMAVAS Trigger: TGATGCCACTGCCATCCTCCAGGAGTTGCCACTGCT...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTATCATCAAAGGCCTGCTaGATCACAGGGCACAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLSSKAC*ITGHRW Trigger: CCACCTGTGCCCTGTGATCCAGCAGGCCTTTGATGA...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTTCGTTCAGCACAATGTaGGGGGTGCTGTGGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCSFSTM*GVLWVK Trigger: CTTCACCCACAGCACCCCCCACATTGTGCTGAACGA...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | AGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCCGTATCCCAAGGCCTTaGACATTGACATGGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: SRLPHSWLGPGRGWLLLSRIPRP*TLTWGL Trigger: GAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACG...GGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGGGTCAGGTGTTTCTaGATGACTTCTGGGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYWVRCF*MTSGPR Trigger: CCTTGGCCCAGAAGTCATCCAGAAACACCTGACCCA...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTATGGGTCAGGTGTTTCTaGATGACTTCTGGGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLWVRCF*MTSGPR Trigger: CCTTGGCCCAGAAGTCATCCAGAAACACCTGACCCA...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCACCTCGGTGCTCATTTaGAACTCCACTATGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AGTWPGLAATVQVFIRRGTSVLI*NSTMVL Trigger: CAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGT...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGTTACAAGCTCCTCCTTaGGGACCAGGGTGGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLLQAPP*GPGWSQ Trigger: TTGTGACCACCCTGGTCCCCAAGGAGGAGCTTGTAA...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR CCA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGCCTTGGACATTGACATaGGGACTCCAGTTCTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LGPGRGWLLLSRSSSGGAPWTLT*GLQFSV Trigger: AACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGG...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR GCA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGATCATGGTCCTTCAGTaGCTGGGTCAGGTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLIMVLQ*LGQVFL Trigger: CAGAAACACCTGACCCAGGCACTGAAGGACCATGAT...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR GCA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTAATCATGGTCCTTCAGTaGCTGGGTCAGGTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLIMVLQ*LGQVFL Trigger: CAGAAACACCTGACCCAGGCACTGAAGGACCATGAT...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS-3UTR TCA 90 bp | GGACAGAGACACCCGGACAACAGGAGCCACGGGCAAGTGTTTATTAACTGCAGGGCTTGTGAAGCAGGCTaGGGCGCAGGGTGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQRHPDNRSHGQVFINCRACEAG*GAGCSH Trigger: ATGAGAGCACCCTGCGCCTCAGCCTGCTTCACAAGC...CCTGCAGTTAATAAACACTTGCCCGTGGCTCCTGTTGTCCGGGTGTCTCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081816.11 |
||
| CDS-3UTR GCA 90 bp | AGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCCTTGTTGGCTGCCTCTaGATTGATTTCCTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPHSWLGPGRGWLLLSLVGCL*IDFLDV Trigger: GACATCAAGGAAATCAATGCAGAGGCAGCCAACAAG...GGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR GCA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTCCAGTTCTCAGTTTaGCATTCTCATTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLLQFSV*HSHWAA Trigger: TGCTGCCCAATGAGAATGGCAAACTGAGAACTGGAG...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR GCA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACCTCCAGTTCTCAGTTTaGCATTCTCATTGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYLQFSV*HSHWAA Trigger: TGCTGCCCAATGAGAATGGCAAACTGAGAACTGGAG...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CCA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGATCACAGGGCACAGGTaGTTTTTCACTATTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLITGHR*FFTIWG Trigger: GCCCCAAATAGTGAAAAACCACCTGTGCCCTGTGAT...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CCA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACCCTTGGACATTGACATaGGGACTCCAGTTCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYPWTLT*GLQFSV Trigger: AACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGG...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR GCA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACCTTGTTGGCTGCCTCTaGATTGATTTCCTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYLVGCL*IDFLDV Trigger: GACATCAAGGAAATCAATGCAGAGGCAGCCAACAAG...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CCA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACGTTTGCCATTCTCATTaGGCAGCAGTGTGTATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYVCHSH*AAVCIQ Trigger: TTGAATACACACTGCTGCCCAATGAGAATGGCAAAC...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CCA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGGTTTGCCATTCTCATTaGGCAGCAGTGTGTATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLVCHSH*AAVCIQ Trigger: TTGAATACACACTGCTGCCCAATGAGAATGGCAAAC...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGACACCCGGACAACAGGAGCCACGGGCAAGTGTTTATTAACTGCAGGGGGCTTGGACCTCGGTaGTCATTTGGAACTCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GQRHPDNRSHGQVFINCRGLGPR*SFGTPL Trigger: TAGTGGAGTTCCAAATGAGCACCGAGGTCCAAGCCC...CCTGCAGTTAATAAACACTTGCCCGTGGCTCCTGTTGTCCGGGTGTCTCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081816.11 |
||
| CDS-3UTR GCA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTAATTCATAACATTCTTTaGCAAGGAGTTGACCACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLIHNIL*QGVDHE Trigger: TTCGTGGTCAACTCCTTGGCAAAGAATGTTATGAAT...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CCA 90 bp | GGACAGAGACACCCGGACAACAGGAGCCACGGGCAAGTGTTTATTAACTGCAGGACCTCGGTGCTCATTTaGAACTCCACTATGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQRHPDNRSHGQVFINCRTSVLI*NSTMVL Trigger: CAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGT...CCTGCAGTTAATAAACACTTGCCCGTGGCTCCTGTTGTCCGGGTGTCTCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081816.11 |
||
| CDS-3UTR CCA 90 bp | GGACAGAGACACCCGGACAACAGGAGCCACGGGCAAGTGTTTATTAACTGCAGGATCACAGGGCACAGGTaGTTTTTCACTATTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQRHPDNRSHGQVFINCRITGHR*FFTIWG Trigger: GCCCCAAATAGTGAAAAACCACCTGTGCCCTGTGAT...CCTGCAGTTAATAAACACTTGCCCGTGGCTCCTGTTGTCCGGGTGTCTCTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGTTCCAGCACGACACTTaGGGCTGCCCTGGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGFQHDT*GCPGTA Trigger: GGCAGTGCCAGGGCAGCCCAAAGTGTCGTGCTGGAA...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGGAGGCTGGAGTGAGCTaGAGGGCACCCTTGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGEAGVS*RAPLLT Trigger: TGTGAGCAAGGGTGCCCTCAAGCTCACTCCAGCCTC...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTGGGTGGGCCCCAGCTaGTTGGCTGCCTCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HSRLPHSWLGPGRGWLLLWVGPS*LAASAL Trigger: CAATGCAGAGGCAGCCAACAAGCTGGGGCCCACCCA...CAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGAGCTTGAGGGCACCCTaGCTCACAGACCACATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGSLRAP*LTDHMA Trigger: AGCCATGTGGTCTGTGAGCAAGGGTGCCCTCAAGCT...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGGTGGTTTTTCACTATTaGGGGCAGGGCTGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGVVFHY*GQGWHQ Trigger: CTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCAC...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTTGGGTGGGCCCCAGCTaGTTGGCTGCCTCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCWVGPS*LAASAL Trigger: CAATGCAGAGGCAGCCAACAAGCTGGGGCCCACCCA...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTTCCAGCACGACACTTaGGGCTGCCCTGGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYFQHDT*GCPGTA Trigger: GGCAGTGCCAGGGCAGCCCAAAGTGTCGTGCTGGAA...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGCCGGACATCAGTGTaGGTAGGGAACACTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGTWPGLAATVQVFIRRGGRTSV*VGNTSS Trigger: GCTGGAAGTGTTCCCTACCAACACTGATGTCCGGCC...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGCCAAGGCCTTGGACATaGACATGGGGACTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGPRPWT*TWGLQF Trigger: GAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGG...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCACCCGGATGAGGGCTaGGACCTCGGTGCTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLHPDEG*DLGAHL Trigger: CAAATGAGCACCGAGGTCCAAGCCCTCATCCGGGTG...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGGTGGGCCCCAGCTTGTaGGCTGCCTCTGCATTGATT | + |
|
Preference number: 5 (lower is better) Translates to: HSRLPHSWLGPGRGWLLLVGPSL*AASALI Trigger: AATCAATGCAGAGGCAGCCAACAAGCTGGGGCCCAC...CAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACGAGGCTGGAGTGAGCTaGAGGGCACCCTTGCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYEAGVS*RAPLLT Trigger: TGTGAGCAAGGGTGCCCTCAAGCTCACTCCAGCCTC...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGGCAATGGGTGCTGTaGTCAGTCTCAGGAAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGPGRGWLLLSRSSSGGAGQWVL*SVSGSL Trigger: AAGACTTCCTGAGACTGACAACAGCACCCATTGCCC...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTGGCCGGACATCAGTGTaGGTAGGGAACACTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCGRTSV*VGNTSS Trigger: GCTGGAAGTGTTCCCTACCAACACTGATGTCCGGCC...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | AGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCCCAAGGCCTTGGACATaGACATGGGGACTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPHSWLGPGRGWLLLSPRPWT*TWGLQF Trigger: GAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGG...GGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGAGCTTGAGGGCACCCTaGCTCACAGACCACATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLSLRAP*LTDHMA Trigger: AGCCATGTGGTCTGTGAGCAAGGGTGCCCTCAAGCT...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 90 bp | ACGACACTTTGGGCTGCCCTGGCACTGCCCTCGTTCAGCACAATGTaGGGGGTGCTGTGGGTGAAGATCTTCAACATCTGGGTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTLWAALALPSFSTM*GVLWVKIFNIWVGP Trigger: GGGGCCCACCCAGATGTTGAAGATCTTCACCCACAGCACCCCCCACATTGTGCTGAACGAGGGCAGTGCCAGGGCAGCCCAAAGTGTCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACATTACAAGCTCCTCCTaGGGGACCAGGGTGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYITSSS*GTRVVT Trigger: TGTGACCACCCTGGTCCCCAAGGAGGAGCTTGTAAT...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGTTGGCTGCCTCTGCATaGATTTCCTTGATGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGLAASA*ISLMSI Trigger: GATGGACATCAAGGAAATCAATGCAGAGGCAGCCAA...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | AGGTGGGCGGGGCCGCTCTTGCTCCTCTCCACCCGGATGAGGGCTTaGACCTCGGTGCTCATTTGGAACTCCACTATGGTCTTGATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RWAGPLLLLSTRMRA*TSVLIWNSTMVLIS Trigger: ACTGATCAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTCCAAGCCCTCATCCGGGTGGAGAGGAGCAAGAGCGGCCCCGCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTGGGCAATGGGTGCTGTaGTCAGTCTCAGGAAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCGQWVL*SVSGSL Trigger: AAGACTTCCTGAGACTGACAACAGCACCCATTGCCC...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGGAAGTCGCAGAGTTGTaGAACCAGTTGGTTACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HSRLPHSWLGPGRGWLLLEVAEL*NQLVTL Trigger: GAGGGTAACCAACTGGTTCAACAACTCTGCGACTTC...CAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GCTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCTCTGAGATCATCAGCTaGATGCGCTCAATACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: AGTWPGLAATVQVFIRRGSEIIS*MRSILT Trigger: CGTCAGTATTGAGCGCATCAAGCTGATGATCTCAGA...GCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTATCGTATCCCAAGGCCTaGGACATTGACATGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLSYPKA*DIDMGT Trigger: AGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGA...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS TCA 90 bp | GGGCCCTGTCTGGGGTGGTCTCCATCAGAGAAGTCGCAGAGTTGTTaGACCAGTTGGTTACCCTCGCCTGTGAGTCCAGCAGCTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPCLGWSPSEKSQSC*TSWLPSPVSPAAWP Trigger: AGGCCAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGACCACCCCAGACAGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGAACTCCACTATGGTCTaGATCAGTGGTGTGTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGNSTMV*ISGVFS Trigger: ACTAAACACACCACTGATCAAGACCATAGTGGAGTT...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTAGACCTCGGTGCTCATTaGGAACTCCACTATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLDLGAH*ELHYGL Trigger: AAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTC...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGGACCTCGGTGCTCATTaGGAACTCCACTATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLDLGAH*ELHYGL Trigger: AAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTC...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | AGTCTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGGAAGTCGCAGAGTTGTaGAACCAGTTGGTTACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLHSRLPHSWLGPGRGWLEVAEL*NQLVTL Trigger: GAGGGTAACCAACTGGTTCAACAACTCTGCGACTTC...CAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGGGTCTGCATTGATTTCCTaGATGTCCATCTGTAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTWPGLAATVQVFIRRGGSALIS*MSICNW Trigger: CCAGTTACAGATGGACATCAAGGAAATCAATGCAGA...CCCGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTCTGAGATCATCAGCTaGATGCGCTCAATACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYSEIIS*MRSILT Trigger: CGTCAGTATTGAGCGCATCAAGCTGATGATCTCAGA...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | GGCAACTCCTGGAGGATGGCAGTGGCATCATGGTCCTTCAGTGCCTaGGTCAGGTGTTTCTGGATGACTTCTGGGCCAAGGTTGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GNSWRMAVASWSFSA*VRCFWMTSGPRLST Trigger: AGTGCTCAACCTTGGCCCAGAAGTCATCCAGAAACACCTGACCCAGGCACTGAAGGACCATGATGCCACTGCCATCCTCCAGGAGTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGACCTGGCCGGGGCTGGCTGCTACTGTCCAGGTCTTCATCAGGAGGGGCGTCAGGATCGAATAGTTaGATATCTGAGATCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPGRGWLLLSRSSSGGASGSNS*ISEIIS Trigger: GCTGATGATCTCAGATATCAAACTATTCGATCCTGA...CGCCCCTCCTGATGAAGACCTGGACAGTAGCAGCCAGCCCCGGCCAGGTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTGTAGTTTGCCATTCTCATaGGGCAGCAGTGTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TVGFHTPGWDLAGAGCYCSLPFS*GSSVYS Trigger: TGAATACACACTGCTGCCCAATGAGAATGGCAAACT...ACAGTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACAGTTTGCCATTCTCATaGGGCAGCAGTGTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYSLPFS*GSSVYS Trigger: TGAATACACACTGCTGCCCAATGAGAATGGCAAACT...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTAAACTCCACTATGGTCTaGATCAGTGGTGTGTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLNSTMV*ISGVFS Trigger: ACTAAACACACCACTGATCAAGACCATAGTGGAGTT...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | TACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTACTCTGCATTGATTTCCTaGATGTCCATCTGTAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: YTVGFHTPGWDLAGAGCYSALIS*MSICNW Trigger: CCAGTTACAGATGGACATCAAGGAAATCAATGCAGA...GTAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS TCA 90 bp | CACCATGTCCAGGGGGATTCTGACCACCAGCTCCTGGTCATAAGTTaGAGGCTGCACATCCAGCTGGAGGATGTTAGCAGAGGTGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: HHVQGDSDHQLLVIS*RLHIQLEDVSRGDL Trigger: AAGGTCACCTCTGCTAACATCCTCCAGCTGGATGTGCAGCCTTCAACTTATGACCAGGAGCTGGTGGTCAGAATCCCCCTGGACATGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | ATCATGGTCCTTCAGTGCCTGGGTCAGGTGTTTCTGGATGACTTCTaGGCCAAGGTTGAGCACTGCAGGGGGATAGACGTTAGCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: IMVLQCLGQVFLDDF*AKVEHCRGIDVSLD Trigger: GTCCAAGCTAACGTCTATCCCCCTGCAGTGCTCAACCTTGGCCCAGAAGTCATCCAGAAACACCTGACCCAGGCACTGAAGGACCATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | TTGCTCCTCTCCACCCGGATGAGGGCTTGGACCTCGGTGCTCATTTaGAACTCCACTATGGTCTTGATCAGTGGTGTGTTTAGTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLSTRMRAWTSVLI*NSTMVLISGVFSPA Trigger: GGCTGGACTAAACACACCACTGATCAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTCCAAGCCCTCATCCGGGTGGAGAGGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | CTACACAGTAGGCTTCCACACTCCTGGCTGGGACCTGGCCGGGGCTGGCTGCTATCAGGATCGAATAGTTaGATATCTGAGATCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHSRLPHSWLGPGRGWLLSGSNS*ISEIIS Trigger: GCTGATGATCTCAGATATCAAACTATTCGATCCTGA...TAGCAGCCAGCCCCGGCCAGGTCCCAGCCAGGAGTGTGGAAGCCTACTGTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGACAGAGACACCCGGACAACAGGAGCCACGGGCAAGTGTTTATTAACTGCAGGTCGTATCCCAAGGCCTaGGACATTGACATGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GQRHPDNRSHGQVFINCRSYPKA*DIDMGT Trigger: AGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGA...CCTGCAGTTAATAAACACTTGCCCGTGGCTCCTGTTGTCCGGGTGTCTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081816.11 |
||
| CDS TCA 90 bp | GCTCACAGACCACATGGCTTTCTCGTATCCCAAGGCCTTGGACATTaGCATGGGGACTCCAGTTCTCAGTTTGCCATTCTCATTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AHRPHGFLVSQGLGH*HGDSSSQFAILIGQ Trigger: CTGCCCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGTCTGTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | CAGACCACATGGCTTTCTCGTATCCCAAGGCCTTGGACATTGACATaGGGACTCCAGTTCTCAGTTTGCCATTCTCATTGGGCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTTWLSRIPRPWTLT*GLQFSVCHSHWAAV Trigger: CACTGCTGCCCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS-3UTR CAA 90 bp | GGACAGAGACACCCGGACAACAGGAGCCACGGGCAAGTGTTTATTAACTGCAGGTTGGCTGCCTCTGCATaGATTTCCTTGATGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GQRHPDNRSHGQVFINCRLAASA*ISLMSI Trigger: GATGGACATCAAGGAAATCAATGCAGAGGCAGCCAA...CCTGCAGTTAATAAACACTTGCCCGTGGCTCCTGTTGTCCGGGTGTCTCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | CTGGATCACAGGGCACAGGTGGTTTTTCACTATTTGGGGCAGGGCTaGCACCAGGAGATTCATAACATTCTTTGCCAAGGAGTTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LDHRAQVVFHYLGQG*HQEIHNILCQGVDH Trigger: GTGGTCAACTCCTTGGCAAAGAATGTTATGAATCTCCTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCACCTGTGCCCTGTGATCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | TCAAAGGCCTGCTGGATCACAGGGCACAGGTGGTTTTTCACTATTTaGGGCAGGGCTGGCACCAGGAGATTCATAACATTCTTTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKACWITGHRWFFTI*GRAGTRRFITFFAK Trigger: CTTGGCAAAGAATGTTATGAATCTCCTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCACCTGTGCCCTGTGATCCAGCAGGCCTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | TCTTCGTACATGTCATCAAAGGCCTGCTGGATCACAGGGCACAGGTaGTTTTTCACTATTTGGGGCAGGGCTGGCACCAGGAGATTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SSYMSSKACWITGHR*FFTIWGRAGTRRFI Trigger: TATGAATCTCCTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCACCTGTGCCCTGTGATCCAGCAGGCCTTTGATGACATGTACGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | CACCCTTGCTCACAGACCACATGGCTTTCTCGTATCCCAAGGCCTTaGACATTGACATGGGGACTCCAGTTCTCAGTTTGCCATTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HPCSQTTWLSRIPRP*TLTWGLQFSVCHSH Trigger: ATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGTCTGTGAGCAAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 90 bp | TTGTTGGCTGCCTCTGCATTGATTTCCTTGATGTCCATCTGTAACTaGCGGGCCACATCAGGAATCACGAATCTGAGCAGGATTACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLAASALISLMSICN*RATSGITNLSRITS Trigger: GCTTGTAATCCTGCTCAGATTCGTGATTCCTGATGTGGCCCGCCAGTTACAGATGGACATCAAGGAAATCAATGCAGAGGCAGCCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS TCA 72 bp | GGTGGGCGGGGCCGCTCTTGCTCCTCTCCACCCGGATaGGGGCTTGGACCTCGGTGCTCATTTGGAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGRGRSCSSPPG*GLGPRCSFGTP Trigger: TGGAGTTCCAAATGAGCACCGAGGTCCAAGCCCTCATCCGGGTGGAGAGGAGCAAGAGCGGCCCCGCCCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 90 bp | CAGGTGGGCGGGGCCGCTCTTGCTCCTCTCCACCCGGATGAGGGCTaGGACCTCGGTGCTCATTTGGAACTCCACTATGGTCTTGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: QVGGAALAPLHPDEG*DLGAHLELHYGLDQ Trigger: CTGATCAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTCCAAGCCCTCATCCGGGTGGAGAGGAGCAAGAGCGGCCCCGCCCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 72 bp | GTCCTGCCTCACGGTCAGGCTGAAGGGGGCCCTGTCTaGGGTGGTCTCCATCAGAGAAGTCGCAGAGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLPHGQAEGGPV*GGLHQRSRRVV Trigger: AACAACTCTGCGACTTCTCTGATGGAGACCACCCCAGACAGGGCCCCCTTCAGCCTGACCGTGAGGCAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 90 bp | GGGGCCCTGTCTGGGGTGGTCTCCATCAGAGAAGTCGCAGAGTTGTaGAACCAGTTGGTTACCCTCGCCTGTGAGTCCAGCAGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GALSGVVSIREVAEL*NQLVTLACESSSLA Trigger: GGCCAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGACCACCCCAGACAGGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS GCA 72 bp | GTTGGTAGGGAACACTTCCAGCACGACACTTTGGGCTaGCCTGGCACTGCCCTCGTTCAGCACAATGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGREHFQHDTLG*PGTALVQHNVG Trigger: CCCCACATTGTGCTGAACGAGGGCAGTGCCAGGGCAGCCCAAAGTGTCGTGCTGGAAGTGTTCCCTACCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 72 bp | TGGGCTGCCCTGGCACTGCCCTCGTTCAGCACAATGTaGGGGGTGCTGTGGGTGAAGATCTTCAACATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WAALALPSFSTM*GVLWVKIFNIW Trigger: CCAGATGTTGAAGATCTTCACCCACAGCACCCCCCACATTGTGCTGAACGAGGGCAGTGCCAGGGCAGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 90 bp | AAGGGGGCCCTGTCTGGGGTGGTCTCCATCAGAGAAGTCGCAGAGTaGTTGAACCAGTTGGTTACCCTCGCCTGTGAGTCCAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KGALSGVVSIREVAE*LNQLVTLACESSSL Trigger: CAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGACCACCCCAGACAGGGCCCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | GCCAAGGTTGAGCACTGCAGGGGGATAGACGTTAGCTaGGACCAGTGTGGCTCCCAGCAAACCACAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AKVEHCRGIDVS*DQCGSQQTTEE Trigger: CTCCTCTGTGGTTTGCTGGGAGCCACACTGGTCCAAGCTAACGTCTATCCCCCTGCAGTGCTCAACCTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 72 bp | GCATCATGGTCCTTCAGTGCCTGGGTCAGGTGTTTCTaGATGACTTCTGGGCCAAGGTTGAGCACTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASWSFSAWVRCF*MTSGPRLSTAG Trigger: CCCTGCAGTGCTCAACCTTGGCCCAGAAGTCATCCAGAAACACCTGACCCAGGCACTGAAGGACCATGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 72 bp | TGGAGGATGGCAGTGGCATCATGGTCCTTCAGTGCCTaGGTCAGGTGTTTCTGGATGACTTCTGGGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WRMAVASWSFSA*VRCFWMTSGPR Trigger: CCTTGGCCCAGAAGTCATCCAGAAACACCTGACCCAGGCACTGAAGGACCATGATGCCACTGCCATCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 72 bp | AGCAGTGGCAACTCCTGGAGGATGGCAGTGGCATCATaGTCCTTCAGTGCCTGGGTCAGGTGTTTCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSGNSWRMAVAS*SFSAWVRCFWM Trigger: CATCCAGAAACACCTGACCCAGGCACTGAAGGACCATGATGCCACTGCCATCCTCCAGGAGTTGCCACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | ATCTGGGTGGGCCCCAGCTTGTTGGCTGCCTCTGCATaGATTTCCTTGATGTCCATCTGTAACTGGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IWVGPSLLAASA*ISLMSICNWRA Trigger: GGCCCGCCAGTTACAGATGGACATCAAGGAAATCAATGCAGAGGCAGCCAACAAGCTGGGGCCCACCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 90 bp | GACTTCTGGGCCAAGGTTGAGCACTGCAGGGGGATAGACGTTAGCTaGGACCAGTGTGGCTCCCAGCAAACCACAGAGGAGGGTGATAAT | + |
|
Preference number: 6 (lower is better) Translates to: DFWAKVEHCRGIDVS*DQCGSQQTTEEGDN Trigger: ATTATCACCCTCCTCTGTGGTTTGCTGGGAGCCACACTGGTCCAAGCTAACGTCTATCCCCCTGCAGTGCTCAACCTTGGCCCAGAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 90 bp | TCTGGGGTGGTCTCCATCAGAGAAGTCGCAGAGTTGTTGAACCAGTaGGTTACCCTCGCCTGTGAGTCCAGCAGCTTGGCCTTCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGVVSIREVAELLNQ*VTLACESSSLAFRF Trigger: GAACCTGAAGGCCAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGACCACCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS TCA 72 bp | CTGGGGTGGTCTCCATCAGAGAAGTCGCAGAGTTGTTaGACCAGTTGGTTACCCTCGCCTGTGAGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGWSPSEKSQSC*TSWLPSPVSPA Trigger: TGCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGACCACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS TCA 72 bp | TCTGTAACTGGCGGGCCACATCAGGAATCACGAATCTaGGCAGGATTACAAGCTCCTCCTTGGGGACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVTGGPHQESRI*AGLQAPPWGPG Trigger: CCCTGGTCCCCAAGGAGGAGCTTGTAATCCTGCTCAGATTCGTGATTCCTGATGTGGCCCGCCAGTTACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS GCA 72 bp | GCCAAACTCCAGGGCTCCAGGACTGAGGGCAATGGGTaGTGTTGTCAGTCTCAGGAAGTCTTCGTACATGTC | + |
|
Preference number: 6 (lower is better) Translates to: AKLQGSRTEGNG*CCQSQEVFVHV Trigger: GACATGTACGAAGACTTCCTGAGACTGACAACAGCACCCATTGCCCTCAGTCCTGGAGCCCTGGAGTTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | GTCTCCATCAGAGAAGTCGCAGAGTTGTTGAACCAGTaGGTTACCCTCGCCTGTGAGTCCAGCAGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSIREVAELLNQ*VTLACESSSLA Trigger: GGCCAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | TCTGGGGTGGTCTCCATCAGAGAAGTCGCAGAGTTGTaGAACCAGTTGGTTACCCTCGCCTGTGAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGVVSIREVAEL*NQLVTLACESS Trigger: GCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGACCACCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | CTGTCTGGGGTGGTCTCCATCAGAGAAGTCGCAGAGTaGTTGAACCAGTTGGTTACCCTCGCCTGTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSGVVSIREVAE*LNQLVTLACES Trigger: GGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTCTGCGACTTCTCTGATGGAGACCACCCCAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | GGCCCCAGCTTGTTGGCTGCCTCTGCATTGATTTCCTaGATGTCCATCTGTAACTGGCGGGCCACATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPSLLAASALIS*MSICNWRATSG Trigger: TCCTGATGTGGCCCGCCAGTTACAGATGGACATCAAGGAAATCAATGCAGAGGCAGCCAACAAGCTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | ATCAGTGTTGGTAGGGAACACTTCCAGCACGACACTTaGGGCTGCCCTGGCACTGCCCTCGTTCAGCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: ISVGREHFQHDT*GCPGTALVQHN Trigger: ATTGTGCTGAACGAGGGCAGTGCCAGGGCAGCCCAAAGTGTCGTGCTGGAAGTGTTCCCTACCAACACTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS TCA 72 bp | CAGGGGGATTCTGACCACCAGCTCCTGGTCATAAGTTaGAGGCTGCACATCCAGCTGGAGGATGTTAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QGDSDHQLLVIS*RLHIQLEDVSR Trigger: TCTGCTAACATCCTCCAGCTGGATGTGCAGCCTTCAACTTATGACCAGGAGCTGGTGGTCAGAATCCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS TCA 72 bp | GTGTGTTTAGTCCAGCCACCATGTCCAGGGGGATTCTaGCCACCAGCTCCTGGTCATAAGTTGAAGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VCLVQPPCPGGF*PPAPGHKLKAA Trigger: TGCAGCCTTCAACTTATGACCAGGAGCTGGTGGTCAGAATCCCCCTGGACATGGTGGCTGGACTAAACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CCA 72 bp | GATACTGCCAGACTTATCTTGCATGGCTCTGAGCAGTaGCAACTCCTGGAGGATGGCAGTGGCATCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DTARLILHGSEQ*QLLEDGSGIMV Trigger: GACCATGATGCCACTGCCATCCTCCAGGAGTTGCCACTGCTCAGAGCCATGCAAGATAAGTCTGGCAGTATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | GGAATCACGAATCTGAGCAGGATTACAAGCTCCTCCTaGGGGACCAGGGTGGTCACAATGGCATTCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GITNLSRITSSS*GTRVVTMAFTR Trigger: CCTGGTGAATGCCATTGTGACCACCCTGGTCCCCAAGGAGGAGCTTGTAATCCTGCTCAGATTCGTGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 72 bp | TCAATGCCGAGAGAGAAGAAGGGCCGGACATCAGTGTaGGTAGGGAACACTTCCAGCACGACACTTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SMPREKKGRTSV*VGNTSSTTLWA Trigger: AGCCCAAAGTGTCGTGCTGGAAGTGTTCCCTACCAACACTGATGTCCGGCCCTTCTTCTCTCTCGGCATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
||
| CDS CAA 90 bp | ATCTTCAACATCTGGGTGGGCCCCAGCTTGTTGGCTGCCTCTGCATaGATTTCCTTGATGTCCATCTGTAACTGGCGGGCCACATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IFNIWVGPSLLAASA*ISLMSICNWRATSG Trigger: TCCTGATGTGGCCCGCCAGTTACAGATGGACATCAAGGAAATCAATGCAGAGGCAGCCAACAAGCTGGGGCCCACCCAGATGTTGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 90 bp | GGGGTGCTGTGGGTGAAGATCTTCAACATCTGGGTGGGCCCCAGCTaGTTGGCTGCCTCTGCATTGATTTCCTTGATGTCCATCTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: GVLWVKIFNIWVGPS*LAASALISLMSICN Trigger: GTTACAGATGGACATCAAGGAAATCAATGCAGAGGCAGCCAACAAGCTGGGGCCCACCCAGATGTTGAAGATCTTCACCCACAGCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS GCA 72 bp | AAGCTGTCCAGTATGGGGATACTGCCAGACTTATCTTaGATGGCTCTGAGCAGTGGCAACTCCTGGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: KLSSMGILPDLS*MALSSGNSWRM Trigger: CATCCTCCAGGAGTTGCCACTGCTCAGAGCCATGCAAGATAAGTCTGGCAGTATCCCCATACTGGACAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | TCCACCCGGATGAGGGCTTGGACCTCGGTGCTCATTTaGAACTCCACTATGGTCTTGATCAGTGGTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: STRMRAWTSVLI*NSTMVLISGVF Trigger: AAACACACCACTGATCAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTCCAAGCCCTCATCCGGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | ACCAGTTGGTTACCCTCGCCTGTGAGTCCAGCAGCTTaGCCTTCAGGTTCAACAGGATATTACTGTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TSWLPSPVSPAA*PSGSTGYYCPG Trigger: TCCAGGACAGTAATATCCTGTTGAACCTGAAGGCCAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | GAAGCTGTCCAGTATGGGGATACTGCCAGACTTATCTaGCATGGCTCTGAGCAGTGGCAACTCCTGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: EAVQYGDTARLI*HGSEQWQLLED Trigger: ATCCTCCAGGAGTTGCCACTGCTCAGAGCCATGCAAGATAAGTCTGGCAGTATCCCCATACTGGACAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | AACCAGTTGGTTACCCTCGCCTGTGAGTCCAGCAGCTaGGCCTTCAGGTTCAACAGGATATTACTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: NQLVTLACESSS*AFRFNRILLSW Trigger: CCAGGACAGTAATATCCTGTTGAACCTGAAGGCCAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 90 bp | GTGCTGTGGGTGAAGATCTTCAACATCTGGGTGGGCCCCAGCTTGTaGGCTGCCTCTGCATTGATTTCCTTGATGTCCATCTGTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: VLWVKIFNIWVGPSL*AASALISLMSICNW Trigger: CCAGTTACAGATGGACATCAAGGAAATCAATGCAGAGGCAGCCAACAAGCTGGGGCCCACCCAGATGTTGAAGATCTTCACCCACAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 90 bp | GCACCCTTGCTCACAGACCACATGGCTTTCTCGTATCCCAAGGCCTaGGACATTGACATGGGGACTCCAGTTCTCAGTTTGCCATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: APLLTDHMAFSYPKA*DIDMGTPVLSLPFS Trigger: TGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGTCTGTGAGCAAGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 90 bp | GAGTTGTTGAACCAGTTGGTTACCCTCGCCTGTGAGTCCAGCAGCTaGGCCTTCAGGTTCAACAGGATATTACTGTCCTGGATAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ELLNQLVTLACESSS*AFRFNRILLSWIAG Trigger: TCCTGCTATCCAGGACAGTAATATCCTGTTGAACCTGAAGGCCAAGCTGCTGGACTCACAGGCGAGGGTAACCAACTGGTTCAACAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 90 bp | TGCTCACAGACCACATGGCTTTCTCGTATCCCAAGGCCTTGGACATaGACATGGGGACTCCAGTTCTCAGTTTGCCATTCTCATTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CSQTTWLSRIPRPWT*TWGLQFSVCHSHWA Trigger: TGCCCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGTCTGTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS TCA 72 bp | GGACCTCGGTGCTCATTTGGAACTCCACTATGGTCTTaGTCAGTGGTGTGTTTAGTCCAGCCACCATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GPRCSFGTPLWS*SVVCLVQPPCP Trigger: TGGACATGGTGGCTGGACTAAACACACCACTGATCAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS TCA 72 bp | CCACATGGCTTTCTCGTATCCCAAGGCCTTGGACATTaGCATGGGGACTCCAGTTCTCAGTTTGCCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: PHGFLVSQGLGH*HGDSSSQFAIL Trigger: GAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | TGCTGGATCACAGGGCACAGGTGGTTTTTCACTATTTaGGGCAGGGCTGGCACCAGGAGATTCATAACATTC | + |
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Preference number: 6 (lower is better) Translates to: CWITGHRWFFTI*GRAGTRRFITF Trigger: GAATGTTATGAATCTCCTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCACCTGTGCCCTGTGATCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | GCCTCTGCATTGATTTCCTTGATGTCCATCTGTAACTaGCGGGCCACATCAGGAATCACGAATCTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASALISLMSICN*RATSGITNLSR Trigger: CCTGCTCAGATTCGTGATTCCTGATGTGGCCCGCCAGTTACAGATGGACATCAAGGAAATCAATGCAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | TCACAGACCACATGGCTTTCTCGTATCCCAAGGCCTTaGACATTGACATGGGGACTCCAGTTCTCAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SQTTWLSRIPRP*TLTWGLQFSVC Trigger: GCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGTCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | TGGACCTCGGTGCTCATTTGGAACTCCACTATGGTCTaGATCAGTGGTGTGTTTAGTCCAGCCACCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: WTSVLIWNSTMV*ISGVFSPATMS Trigger: GGACATGGTGGCTGGACTAAACACACCACTGATCAAGACCATAGTGGAGTTCCAAATGAGCACCGAGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | CTCACAGACCACATGGCTTTCTCGTATCCCAAGGCCTaGGACATTGACATGGGGACTCCAGTTCTCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LTDHMAFSYPKA*DIDMGTPVLSL Trigger: CAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGTCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | AGGGCACAGGTGGTTTTTCACTATTTGGGGCAGGGCTaGCACCAGGAGATTCATAACATTCTTTGCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: RAQVVFHYLGQG*HQEIHNILCQG Trigger: TCCTTGGCAAAGAATGTTATGAATCTCCTGGTGCCAGCCCTGCCCCAAATAGTGAAAAACCACCTGTGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | ACATGGGGACTCCAGTTCTCAGTTTGCCATTCTCATTaGGCAGCAGTGTGTATTCAAGGATCTTGGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TWGLQFSVCHSH*AAVCIQGSWSG Trigger: CCCTGACCAAGATCCTTGAATACACACTGCTGCCCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | TGGCTTTCTCGTATCCCAAGGCCTTGGACATTGACATaGGGACTCCAGTTCTCAGTTTGCCATTCTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: WLSRIPRPWTLT*GLQFSVCHSHW Trigger: CCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | GACATGGGGACTCCAGTTCTCAGTTTGCCATTCTCATaGGGCAGCAGTGTGTATTCAAGGATCTTGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: DMGTPVLSLPFS*GSSVYSRILVR Trigger: CCTGACCAAGATCCTTGAATACACACTGCTGCCCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | GCCTTGGACATTGACATGGGGACTCCAGTTCTCAGTTaGCCATTCTCATTGGGCAGCAGTGTGTATTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: ALDIDMGTPVLS*PFSLGSSVYSR Trigger: CCTTGAATACACACTGCTGCCCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | ACCACATGGCTTTCTCGTATCCCAAGGCCTTGGACATaGACATGGGGACTCCAGTTCTCAGTTTGCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: TTWLSRIPRPWT*TWGLQFSVCHS Trigger: AGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGGCCTTGGGATACGAGAAAGCCATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS GCA 72 bp | CCTTGGACATTGACATGGGGACTCCAGTTCTCAGTTTaGCATTCTCATTGGGCAGCAGTGTGTATTCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PWTLTWGLQFSV*HSHWAAVCIQG Trigger: TCCTTGAATACACACTGCTGCCCAATGAGAATGGCAAACTGAGAACTGGAGTCCCCATGTCAATGTCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | CTCAGGAAGTCTTCGTACATGTCATCAAAGGCCTGCTaGATCACAGGGCACAGGTGGTTTTTCACTATTTGG | + |
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Preference number: 6 (lower is better) Translates to: LRKSSYMSSKAC*ITGHRWFFTIW Trigger: CCAAATAGTGAAAAACCACCTGTGCCCTGTGATCCAGCAGGCCTTTGATGACATGTACGAAGACTTCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS GCA 72 bp | AGTCTCAGGAAGTCTTCGTACATGTCATCAAAGGCCTaGTGGATCACAGGGCACAGGTGGTTTTTCACTATT | + |
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Preference number: 6 (lower is better) Translates to: SLRKSSYMSSKA*WITGHRWFFTI Trigger: AATAGTGAAAAACCACCTGTGCCCTGTGATCCAGCAGGCCTTTGATGACATGTACGAAGACTTCCTGAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CCA 72 bp | CATTCTCATTGGGCAGCAGTGTGTATTCAAGGATCTTaGTCAGGGTGTCCTTCAGGACTTCAGGATCGAATA | + |
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Preference number: 6 (lower is better) Translates to: HSHWAAVCIQGS*SGCPSGLQDRI Trigger: TATTCGATCCTGAAGTCCTGAAGGACACCCTGACCAAGATCCTTGAATACACACTGCTGCCCAATGAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 90 bp | CTCAGTTTGCCATTCTCATTGGGCAGCAGTGTGTATTCAAGGATCTaGGTCAGGGTGTCCTTCAGGACTTCAGGATCGAATAGTTTGATA | + |
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Preference number: 6 (lower is better) Translates to: LSLPFSLGSSVYSRI*VRVSFRTSGSNSLI Trigger: TATCAAACTATTCGATCCTGAAGTCCTGAAGGACACCCTGACCAAGATCCTTGAATACACACTGCTGCCCAATGAGAATGGCAAACTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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| CDS CAA 72 bp | GTCAGGGTGTCCTTCAGGACTTCAGGATCGAATAGTTaGATATCTGAGATCATCAGCTTGATGCGCTCAATA | + |
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Preference number: 6 (lower is better) Translates to: VRVSFRTSGSNS*ISEIISLMRSI Trigger: TATTGAGCGCATCAAGCTGATGATCTCAGATATCAAACTATTCGATCCTGAAGTCCTGAAGGACACCCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028987.7 ENSMUST00000081816.11 |
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