Pregenerated sensors for BPIFA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078998Ensembl transcript IDs: ENSMUST00000109753.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGTCTTaGCCTCCACTTGAGCCTTCATGGCTGGTCTCTGGAGACTTTGAG | + |
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Preference number: 1 (lower is better) Translates to: VPRILSCQMLGCCRS*PPLEPSWLVSGDFE Trigger: CTCAAAGTCTCCAGAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR GCA 90 bp | AGGAAGAATGTGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTaGCAGATGCTTGGCTGCTGCAGGTCTTGCCCTCCACTTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: RKNVCHGRGVPRILS*QMLGCCRSCPPLEP Trigger: AGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACACATTCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 90 bp | TGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTaGGCTGCTGCAGGTCTTGCCCTCCACTTGAGCCTTCATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CVMVEGFPGSSPARC*AAAGLALHLSLHGW Trigger: CCAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR-3UTR TCA 90 bp | GTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGTCTTGCCCTCCACTTaGGCCTTCATGGCTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VMVEGFPGSSPARCLAAAVLPST*AFMAGL Trigger: GAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGAC...TGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 90 bp | TCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGTCTTGCCCTCCACTaGAGCCTTCATGGCTGGTCTCTGGAGACTTTGAGGGCTACATCC | + |
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Preference number: 2 (lower is better) Translates to: SSPARCLAAAGLALH*SLHGWSLETLRATS Trigger: GGATGTAGCCCTCAAAGTCTCCAGAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 90 bp | GGTCTTGCCCTCCACTTGAGCCTTCATGGCTGGTCTCTGGAGACTTaGAGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLALHLSLHGWSLET*RATSRLTPLAPSSS Trigger: AGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTCAAAGTCTCCAGAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 90 bp | AGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCTaGCACAGTTGTCTGGCTTTAGAAGTCTTCCTCAAGCCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: RATSRLTPLAPSSSS*HSCLALEVFLKPAW Trigger: CCATGCTGGCTTGAGGAAGACTTCTAAAGCCAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR GCA 72 bp | GGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTaGTGCAGGTCTTGCCCTCCACTTGAGCCTTCATGG | + |
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Preference number: 3 (lower is better) Translates to: GVPRILSCQMLG*CRSCPPLEPSW Trigger: CCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR GCA 72 bp | GTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTaGAGGTCTTGCCCTCCACTTGAGCCTTCATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VPRILSCQMLGC*RSCPPLEPSWL Trigger: CAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR GCA 72 bp | ATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATaGTTGGCTGCTGCAGGTCTTGCCCTCCACTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: MVEGFPGSSPAR*LAAAGLALHLS Trigger: GCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR GCA 72 bp | GTGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTaGCAGATGCTTGGCTGCTGCAGGTCTTGCCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VCHGRGVPRILS*QMLGCCRSCPP Trigger: TGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR GCA 72 bp | ATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGTCTTaGCCTCCACTTGAGCCTTCATGGCTGGTCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: ILSCQMLGCCRS*PPLEPSWLVSG Trigger: TCCAGAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR-3UTR CAA 90 bp | CATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGCCTTCTTCTTCTTCCTaGCACAGTTGTCTGGCTTTA | + |
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Preference number: 3 (lower is better) Translates to: HGRGVPRILSCQMLGCCRPSSSS*HSCLAL Trigger: TAAAGCCAGACAACTGTGCAAGGAAGAAGAAGAAGG...CCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR GCA 72 bp | GGAGACTTTGAGGGCTACATCCAGGCTAACTCCACTTaGCCCTTCTTCTTCTTCCTTGCACAGTTGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GDFEGYIQANST*PFFFFLAQLSG Trigger: GCCAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTCAAAGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR-3UTR CAA 90 bp | AGACCTTTATTGTTTCTGATTAGAGAGACACTTGAGACAATTTCTGCTACATTCTCTCCTGCCAGATGCTaGGCTGCTGCAGGTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: RPLLFLIRETLETISATFSPARC*AAAGLA Trigger: GGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGA...GAATGTAGCAGAAATTGTCTCAAGTGTCTCTCTAATCAGAAACAATAAAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR-3UTR CAA 90 bp | ATGATAGATCCAAATAAGAAATGGCCTATTAAGTGTGACCTGCAGGAAGAATGTTGGTCTCTGGAGACTTaGAGGGCTACATCCAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: MIDPNKKWPIKCDLQEECWSLET*RATSRL Trigger: TAGCCTGGATGTAGCCCTCAAAGTCTCCAGAGACCA...ACATTCTTCCTGCAGGTCACACTTAATAGGCCATTTCTTATTTGGATCTATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | GCAGGAAGAATGTGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGACCAGAGAGACTCCCATaGCCACAAAGGCCACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGRMCVMVEGFPGSSPARPERLP*PQRPPR Trigger: CCTGGGTGGCCTTTGTGGCCATGGGAGTCTCTCTGG...TCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACACATTCTTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 72 bp | GCCAGATGCTTGGCTGCTGCAGGTCTTGCCCTCCACTaGAGCCTTCATGGCTGGTCTCTGGAGACTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ARCLAAAGLALH*SLHGWSLETLR Trigger: CCTCAAAGTCTCCAGAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 72 bp | CTCCACTTGAGCCTTCATGGCTGGTCTCTGGAGACTTaGAGGGCTACATCCAGGCTAACTCCACTTGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LHLSLHGWSLET*RATSRLTPLAP Trigger: AGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTCAAAGTCTCCAGAGACCAGCCATGAAGGCTCAAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTCTCTGGAGACTTTGAGGGCTACATCCAGGCTAACTCCACTTGCCCCTGTGTCCAAGCCTCCTaGGATGTTCATCTCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: WLVSGDFEGYIQANSTCPCVQAS*DVHLRL Trigger: CAACCTGAGATGAACATCCCAGGAGGCTTGGACACA...GGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTCAAAGTCTCCAGAGACCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGAAGAATGTGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCGTTGAGGCCAGATGTTaGCAATTGGCTGGTAATGCC | + |
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Preference number: 4 (lower is better) Translates to: PAGRMCVMVEGFPGSSPAVEARC*QLAGNA Trigger: GGCATTACCAGCCAATTGCCAACATCTGGCCTCAAC...GGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACACATTCTTCCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR TCA 90 bp | GAGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGCCACTGTGGAGCCACTaGGAAATGAGAGTATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: EGYIQANSTCPFFFFLAQPLWSH*EMRVSL Trigger: CAGGGATACTCTCATTTCTCAGTGGCTCCACAGTGG...CTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR TCA 90 bp | CCTGCAGGAAGAATGTGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCACGGAAAAGGACATTTaGCCAGGTTCCATCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAGRMCVMVEGFPGSSPATEKDI*PGSICC Trigger: GCAACAGATGGAACCTGGTCAAATGTCCTTTTCCGT...GGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACACATTCTTCCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR GCA 90 bp | GCAGGAAGAATGTGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGACGCATTGGTCCCTGCTaGATCCAGGAGATCATTGTT | + |
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Preference number: 4 (lower is better) Translates to: AGRMCVMVEGFPGSSPARRIGPC*IQEIIV Trigger: AACAATGATCTCCTGGATGCAGCAGGGACCAATGCG...TCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACACATTCTTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR TCA 90 bp | CCTGCCAGATGCTTGGCTGCTGCAGGTCTTGCCCTCCACTTGAGCCTTCATGGCTGTAGAGATCTCAGGTaGAGTAACAGTCATAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PARCLAAAGLALHLSLHGCRDLR*SNSHRS Trigger: ACTTCTATGACTGTTACTTCACCTGAGATCTCTACA...GCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | GTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTGCATGCGTTCATACAGCATaGGTTGTTTGGTATCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: VMVEGFPGSSPARCLAAACVHTA*VVWYQA Trigger: TGCTTGATACCAAACAACCCATGCTGTATGAACGCA...TGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR GCA 90 bp | CTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGTTGTCTGGCTTTAGAACACCGCATTGGTCCCTaGTGCATCCAGGAGATCATT | + |
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Preference number: 4 (lower is better) Translates to: LTPLAPSSSSLHSCLALEHRIGP*CIQEII Trigger: AATGATCTCCTGGATGCAGCAGGGACCAATGCGGTG...TTCTAAAGCCAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGTGTCATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTAACAGTCATAGAAGTTaGGATTGTCCCACTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: KNVCHGRGVPRILSCQMLNSHRS*DCPTAI Trigger: GATGGCAGTGGGACAATCCCAACTTCTATGACTGTT...AAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATGACACACATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | GAGACTTTGAGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCACACCTGAATTCACTTaGATCCCAGTGAATACTGCC | + |
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Preference number: 4 (lower is better) Translates to: ETLRATSRLTPLAPSSSSTPEFT*IPVNTA Trigger: GGCAGTATTCACTGGGATCCAAGTGAATTCAGGTGT...GGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTCAAAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | AGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGTAGTGAGGCGATATTTTaGAGAATGGCCAACTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RATSRLTPLAPSSSSLHSSEAIF*RMANCW Trigger: CCAACAGTTGGCCATTCTCCAAAATATCGCCTCACT...ACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 72 bp | AACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGTaGTCTGGCTTTAGAAGTCTTCCTCAAGCCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: NSTCPFFFFLAQ*SGFRSLPQASM Trigger: CATGCTGGCTTGAGGAAGACTTCTAAAGCCAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| 3UTR CAA 72 bp | TCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCTaGCACAGTTGTCTGGCTTTAGAAGTCTTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: SRLTPLAPSSSS*HSCLALEVFLK Trigger: CTTGAGGAAGACTTCTAAAGCCAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR GCA 90 bp | AGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGTCACCTTCACTTTGGATaGCTGACTTTTGAATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RATSRLTPLAPSSSSLHSHLHFG*LTFEWN Trigger: ATTCCATTCAAAAGTCAGGCATCCAAAGTGAAGGTG...ACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR TCA 90 bp | ACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGTTGTCTGGGACCATTTCAACATTaGTTCCATCATTTTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: TSRLTPLAPSSSSLHSCLGPFQH*FHHFGD Trigger: ATCTCCAAAATGATGGAATCAATGTTGAAATGGTCC...CAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | CTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGTTGTCTGGCTTTAGAAGTTCCCCAGAATTCATaGTCTTCAGAGCATCATTCA | + |
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Preference number: 4 (lower is better) Translates to: LTPLAPSSSSLHSCLALEVPQNS*SSEHHS Trigger: TGAATGATGCTCTGAAGACCATGAATTCTGGGGAAC...TTCTAAAGCCAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | CTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCACAGTTGTCTGGCTTTAGAAACAGCATGGGTTGTTTaGTATCAAGCAAGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LTPLAPSSSSLHSCLALETAWVV*YQASCC Trigger: ACAGCAACTTGCTTGATACCAAACAACCCATGCTGT...TTCTAAAGCCAGACAACTGTGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR GCA 90 bp | TTGTTTCTGATTAGAGAGACACTTGAGACAATTTCTGCTACATTCTTAGCAGCACCAGGTTCCATCTGTTaGAATTGCAAGGGGATCTCG | + |
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Preference number: 4 (lower is better) Translates to: LFLIRETLETISATFLAAPGSIC*NCKGIS Trigger: CGAGATCCCCTTGCAATTGCAACAGATGGAACCTGG...TGCTGCTAAGAATGTAGCAGAAATTGTCTCAAGTGTCTCTCTAATCAGAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | ATGATAGATCCAAATAAGAAATGGCCTATTAAGTGTGACCTGCAGGAAGAATGTCTGGGCACAACATGTTaGGCAAGGAGATGTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: MIDPNKKWPIKCDLQEECLGTTC*ARRCSR Trigger: CCTTGAACATCTCCTTGCCCAACATGTTGTGCCCAG...ACATTCTTCCTGCAGGTCACACTTAATAGGCCATTTCTTATTTGGATCTATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR GCA 90 bp | TTGTTTCTGATTAGAGAGACACTTGAGACAATTTCTGCTACATTCTTAGCAGCACACCAAATGATACTCTaGCACCCAGGAGTAGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: LFLIRETLETISATFLAAHQMIL*HPGVAF Trigger: AAACGCTACTCCTGGGTGGCAGAGTATCATTTGGTG...TGCTGCTAAGAATGTAGCAGAAATTGTCTCAAGTGTCTCTCTAATCAGAAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR TCA 90 bp | AGACCTTTATTGTTTCTGATTAGAGAGACACTTGAGACAATTTCTGCTACATTCATTGTTGACACCAAATaGTACTCTGCCACCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RPLLFLIRETLETISATFIVDTK*YSATQE Trigger: CTCCTGGGTGGCAGAGTATCATTTGGTGTCAACAAT...GAATGTAGCAGAAATTGTCTCAAGTGTCTCTCTAATCAGAAACAATAAAGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR TCA 90 bp | TTTTATATAACTTTCTGTTCGCAGCATAACACCTCATTAATCTCGCACAGAACAGGAGCCACTGAGAAATaGGAGTATCCCTGGGAAATT | + |
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Preference number: 4 (lower is better) Translates to: FYITFCSQHNTSLISHRTGATEK*EYPWEI Trigger: AATTTCCCAGGGATACTCTCATTTCTCAGTGGCTCC...TGTTCTGTGCGAGATTAATGAGGTGTTATGCTGCGAACAGAAAGTTATATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CCA 90 bp | AGACCTTTATTGTTTCTGATTAGAGAGACACTTGAGACAATTTCTGCTACATTCTCTGTGAGTAGATTCTaGCTGTTGAGAATAACAGTA | + |
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Preference number: 4 (lower is better) Translates to: RPLLFLIRETLETISATFSVSRF*LLRITV Trigger: TACTGTTATTCTCAACAGCCAGAATCTACTCACAGA...GAATGTAGCAGAAATTGTCTCAAGTGTCTCTCTAATCAGAAACAATAAAGGTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS GCA 90 bp | TGCCAGAGAGACTCCCATGGCCACAAAGGCCACCCAGGGGGCCTTTaGAGACCAGGCCTTCCACCGCATTGGTCCCTGCTGCATCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CQRDSHGHKGHPGGL*RPGLPPHWSLLHPG Trigger: TCCTGGATGCAGCAGGGACCAATGCGGTGGAAGGCCTGGTCTGCAAAGGCCCCCTGGGTGGCCTTTGTGGCCATGGGAGTCTCTCTGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | CATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGGCCAGCATGTCTTGGTaGAGGCCAGATGTTGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: HGRGVPRILSCQMLGCCRASMSW*RPDVGN Trigger: ATTGCCAACATCTGGCCTCAACCAAGACATGCTGGC...CCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS GCA 90 bp | GGCTGTCGAGTTCCCCAGAATTCATGGTCTTCAGAGCATCATTCATaGCAGAGAGACTCCCATGGCCACAAAGGCCACCCAGGGGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: GCRVPQNSWSSEHHS*QRDSHGHKGHPGGL Trigger: AAGGCCCCCTGGGTGGCCTTTGTGGCCATGGGAGTCTCTCTGGCATGAATGATGCTCTGAAGACCATGAATTCTGGGGAACTCGACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | GGATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGTCTTGCCCTCCACTTGAGCACTGGGCACAACATGTaGGGCAAGGAGATGTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GSSPARCLAAAGLALHLSTGHNM*GKEMFK Trigger: CTTGAACATCTCCTTGCCCAACATGTTGTGCCCAGT...GCTCAAGTGGAGGGCAAGACCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 90 bp | CCTTCCTGGGCCAGCATGTCTTGGTTGAGGCCAGATGTTGGCAATTaGCTGGTAATGCCACTTGTGTCCAAGCCTCCTGGGATGTTCATC | + |
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Preference number: 5 (lower is better) Translates to: PSWASMSWLRPDVGN*LVMPLVSKPPGMFI Trigger: GATGAACATCCCAGGAGGCTTGGACACAAGTGGCATTACCAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | CATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGGAAGCCGGGAAGGTTTaGTTCTTAAAGTCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: HGRGVPRILSCQMLGCCREAGKV*FLKSMV Trigger: TACCATGGACTTTAAGAACAAAACCTTCCCGGCTTC...CCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | CATGGTAGAGGGGTTCCCAGGATCCTCTCCTGCCAGATGCTTGGCTGCTGCAGGTCCAGGAGATCATTGTaGACACCAAATGATACTCTG | + |
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Preference number: 5 (lower is better) Translates to: HGRGVPRILSCQMLGCCRSRRSL*TPNDTL Trigger: CAGAGTATCATTTGGTGTCAACAATGATCTCCTGGA...CCTGCAGCAGCCAAGCATCTGGCAGGAGAGGATCCTGGGAACCCCTCTACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | GCTGCTGCAGGTCTTGCCCTCCACTTGAGCCTTCATGGCTGGTCTCTGGAGACTTACAGCATGGGTTGTTaGGTATCAAGCAAGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: AAAGLALHLSLHGWSLETYSMGC*VSSKLL Trigger: CAGCAACTTGCTTGATACCAAACAACCCATGCTGTA...AGTCTCCAGAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | GCTGCTGCAGGTCTTGCCCTCCACTTGAGCCTTCATGGCTGGTCTCTGGAGACTGTTTTAAACAGCCAGTaGATAAAAGAAGCCGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AAAGLALHLSLHGWSLETVLNSQ*IKEAGK Trigger: CTTCCCGGCTTCTTTTATCAACTGGCTGTTTAAAAC...AGTCTCCAGAGACCAGCCATGAAGGCTCAAGTGGAGGGCAAGACCTGCAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | TTTGAGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCTTGCAACCAGGTTCCATCTGTaGCAATTGCAAGGGGATCTC | + |
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Preference number: 5 (lower is better) Translates to: FEGYIQANSTCPFFFFLATRFHL*QLQGDL Trigger: GAGATCCCCTTGCAATTGCAACAGATGGAACCTGGT...TGCAAGGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 90 bp | TTGAGAATAACAGTACTCAACAGTCCTTCCTGGGCCAGCATGTCTTaGTTGAGGCCAGATGTTGGCAATTGGCTGGTAATGCCACTTGTG | + |
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Preference number: 5 (lower is better) Translates to: LRITVLNSPSWASMS*LRPDVGNWLVMPLV Trigger: CACAAGTGGCATTACCAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGGACTGTTGAGTACTGTTATTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 90 bp | AGTAGATTCTGGCTGTTGAGAATAACAGTACTCAACAGTCCTTCCTaGGCCAGCATGTCTTGGTTGAGGCCAGATGTTGGCAATTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SRFWLLRITVLNSPS*ASMSWLRPDVGNWL Trigger: CAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGGACTGTTGAGTACTGTTATTCTCAACAGCCAGAATCTACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 90 bp | CCCAGGAGTAGCGTTTGTAGCTTTTCCCTTTCTGTGAGTAGATTCTaGCTGTTGAGAATAACAGTACTCAACAGTCCTTCCTGGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PRSSVCSFSLSVSRF*LLRITVLNSPSWAS Trigger: GCTGGCCCAGGAAGGACTGTTGAGTACTGTTATTCTCAACAGCCAGAATCTACTCACAGAAAGGGAAAAGCTACAAACGCTACTCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | GAGACTTTGAGGGCTACATCCAGGCTAACTCCACTTGCCCCTTCTTCTTCTTCCGCATCCAGGAGATCATaGTTGACACCAAATGATACT | + |
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Preference number: 5 (lower is better) Translates to: ETLRATSRLTPLAPSSSSASRRS*LTPNDT Trigger: AGTATCATTTGGTGTCAACAATGATCTCCTGGATGC...GGAAGAAGAAGAAGGGGCAAGTGGAGTTAGCCTGGATGTAGCCCTCAAAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS TCA 90 bp | GCATCCAATCCTGTATCACCACCTTCACTTTGGATGCCTGACTTTTaGATGGAATCTTCCAACAAAGCATGGCTTCTGCTAAGCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: ASNPVSPPSLWMPDF*MESSNKAWLLLSRQ Trigger: CTGCCTGCTTAGCAGAAGCCATGCTTTGTTGGAAGATTCCATTCAAAAGTCAGGCATCCAAAGTGAAGGTGGTGATACAGGATTGGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | TTGTTTCTGATTAGAGAGACACTTGAGACAATTTCTGCTACATTCTTAGCAGCACTGGGCCAGCATGTCTaGGTTGAGGCCAGATGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LFLIRETLETISATFLAALGQHV*VEARCW Trigger: CCAACATCTGGCCTCAACCAAGACATGCTGGCCCAG...TGCTGCTAAGAATGTAGCAGAAATTGTCTCAAGTGTCTCTCTAATCAGAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | CACAGTTGTCTGGCTTTAGAAGTCTTCCTCAAGCCAGCATGGTGTCTCAACTTGAGGACCATTTCAACATaGATTCCATCATTTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: HSCLALEVFLKPAWCLNLRTIST*IPSFWR Trigger: TCTCCAAAATGATGGAATCAATGTTGAAATGGTCCT...CAAGTTGAGACACCATGCTGGCTTGAGGAAGACTTCTAAAGCCAGACAACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | ATGATAGATCCAAATAAGAAATGGCCTATTAAGTGTGACCTGCAGGAAGAATGTCACGGAAAAGGACATTaGACCAGGTTCCATCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: MIDPNKKWPIKCDLQEECHGKGH*TRFHLL Trigger: CAACAGATGGAACCTGGTCAAATGTCCTTTTCCGTG...ACATTCTTCCTGCAGGTCACACTTAATAGGCCATTTCTTATTTGGATCTATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS-3UTR CAA 90 bp | ATGATAGATCCAAATAAGAAATGGCCTATTAAGTGTGACCTGCAGGAAGAATGTGAGAATGGCCAACTGTaGGTTGATGATGTAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: MIDPNKKWPIKCDLQEECENGQL*VDDVEP Trigger: TGGTTCTACATCATCAACCAACAGTTGGCCATTCTC...ACATTCTTCCTGCAGGTCACACTTAATAGGCCATTTCTTATTTGGATCTATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS GCA 72 bp | GACTCCCATGGCCACAAAGGCCACCCAGGGGGCCTTTaGAGACCAGGCCTTCCACCGCATTGGTCCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: DSHGHKGHPGGL*RPGLPPHWSLL Trigger: CAGCAGGGACCAATGCGGTGGAAGGCCTGGTCTGCAAAGGCCCCCTGGGTGGCCTTTGTGGCCATGGGAGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 72 bp | AGACTCCCATGGCCACAAAGGCCACCCAGGGGGCCTTaGCAGACCAGGCCTTCCACCGCATTGGTCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RLPWPQRPPRGP*QTRPSTALVPA Trigger: AGCAGGGACCAATGCGGTGGAAGGCCTGGTCTGCAAAGGCCCCCTGGGTGGCCTTTGTGGCCATGGGAGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 90 bp | ATGCCAGAGAGACTCCCATGGCCACAAAGGCCACCCAGGGGGCCTTaGCAGACCAGGCCTTCCACCGCATTGGTCCCTGCTGCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MPERLPWPQRPPRGP*QTRPSTALVPAASR Trigger: CCTGGATGCAGCAGGGACCAATGCGGTGGAAGGCCTGGTCTGCAAAGGCCCCCTGGGTGGCCTTTGTGGCCATGGGAGTCTCTCTGGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 72 bp | CCCAGGGGGCCTTTGCAGACCAGGCCTTCCACCGCATaGGTCCCTGCTGCATCCAGGAGATCATTGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: PRGPLQTRPSTA*VPAASRRSLLT Trigger: TGTCAACAATGATCTCCTGGATGCAGCAGGGACCAATGCGGTGGAAGGCCTGGTCTGCAAAGGCCCCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 72 bp | GCCAGCATGTCTTGGTTGAGGCCAGATGTTGGCAATTaGCTGGTAATGCCACTTGTGTCCAAGCCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ASMSWLRPDVGN*LVMPLVSKPPG Trigger: CCCAGGAGGCTTGGACACAAGTGGCATTACCAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 90 bp | AGGCCTTCCACCGCATTGGTCCCTGCTGCATCCAGGAGATCATTGTaGACACCAAATGATACTCTGCCACCCAGGAGTAGCGTTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RPSTALVPAASRRSL*TPNDTLPPRSSVCS Trigger: GCTACAAACGCTACTCCTGGGTGGCAGAGTATCATTTGGTGTCAACAATGATCTCCTGGATGCAGCAGGGACCAATGCGGTGGAAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 72 bp | ACCGCATTGGTCCCTGCTGCATCCAGGAGATCATTGTaGACACCAAATGATACTCTGCCACCCAGGAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TALVPAASRRSL*TPNDTLPPRSS Trigger: GCTACTCCTGGGTGGCAGAGTATCATTTGGTGTCAACAATGATCTCCTGGATGCAGCAGGGACCAATGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 90 bp | GCTCTTCACGGAAAAGGACATTTGACCAGGTTCCATCTGTTGCAATaGCAAGGGGATCTCGATGTCCACATCCACTGTGGAGCCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: ALHGKGHLTRFHLLQ*QGDLDVHIHCGATE Trigger: CTCAGTGGCTCCACAGTGGATGTGGACATCGAGATCCCCTTGCAATTGCAACAGATGGAACCTGGTCAAATGTCCTTTTCCGTGAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 72 bp | ACAGTACTCAACAGTCCTTCCTGGGCCAGCATGTCTTaGTTGAGGCCAGATGTTGGCAATTGGCTGGTAATG | + |
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Preference number: 6 (lower is better) Translates to: TVLNSPSWASMS*LRPDVGNWLVM Trigger: CATTACCAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGGACTGTTGAGTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 72 bp | TGGCTGTTGAGAATAACAGTACTCAACAGTCCTTCCTaGGCCAGCATGTCTTGGTTGAGGCCAGATGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: WLLRITVLNSPS*ASMSWLRPDVG Trigger: GCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGGACTGTTGAGTACTGTTATTCTCAACAGCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 90 bp | AGAATAACAGTACTCAACAGTCCTTCCTGGGCCAGCATGTCTTGGTaGAGGCCAGATGTTGGCAATTGGCTGGTAATGCCACTTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RITVLNSPSWASMSW*RPDVGNWLVMPLVS Trigger: GGACACAAGTGGCATTACCAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGGACTGTTGAGTACTGTTATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS TCA 72 bp | AATACTGCCCGGCAGCTCTTCACGGAAAAGGACATTTaGCCAGGTTCCATCTGTTGCAATTGCAAGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: NTARQLFTEKDI*PGSICCNCKGI Trigger: GATCCCCTTGCAATTGCAACAGATGGAACCTGGTCAAATGTCCTTTTCCGTGAAGAGCTGCCGGGCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 72 bp | CAATTGGCTGGTAATGCCACTTGTGTCCAAGCCTCCTaGGATGTTCATCTCAGGTTGATTAAGCTCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: QLAGNATCVQAS*DVHLRLIKLTQ Trigger: CTGGGTGAGCTTAATCAACCTGAGATGAACATCCCAGGAGGCTTGGACACAAGTGGCATTACCAGCCAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 72 bp | AACAGTACTCAACAGTCCTTCCTGGGCCAGCATGTCTaGGTTGAGGCCAGATGTTGGCAATTGGCTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: NSTQQSFLGQHV*VEARCWQLAGN Trigger: ATTACCAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGGACTGTTGAGTACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 90 bp | GTTGAGAATAACAGTACTCAACAGTCCTTCCTGGGCCAGCATGTCTaGGTTGAGGCCAGATGTTGGCAATTGGCTGGTAATGCCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: VENNSTQQSFLGQHV*VEARCWQLAGNATC Trigger: ACAAGTGGCATTACCAGCCAATTGCCAACATCTGGCCTCAACCAAGACATGCTGGCCCAGGAAGGACTGTTGAGTACTGTTATTCTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 72 bp | CCATGGTATAAGTGCGTTCATACAGCATGGGTTGTTTaGTATCAAGCAAGTTGCTGTCCTCCGGCATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: PWYKCVHTAWVV*YQASCCPPASQ Trigger: TTGGGATGCCGGAGGACAGCAACTTGCTTGATACCAAACAACCCATGCTGTATGAACGCACTTATACCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS TCA 72 bp | CTCGATGTCCACATCCACTGTGGAGCCACTGAGAAATaGGAGTATCCCTGGGAAATTGATAGTCAACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LDVHIHCGATEK*EYPWEIDSQLG Trigger: ACCAAGTTGACTATCAATTTCCCAGGGATACTCTCATTTCTCAGTGGCTCCACAGTGGATGTGGACATCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS TCA 72 bp | TTTTGGAGATTACACCTGAATTCACTTGGATCCCAGTaGATACTGCCCGGCAGCTCTTCACGGAAAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: FWRLHLNSLGSQ*ILPGSSSRKRT Trigger: TGTCCTTTTCCGTGAAGAGCTGCCGGGCAGTATTCACTGGGATCCAAGTGAATTCAGGTGTAATCTCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 72 bp | TGTAGCTTTTCCCTTTCTGTGAGTAGATTCTGGCTGTaGAGAATAACAGTACTCAACAGTCCTTCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CSFSLSVSRFWL*RITVLNSPSWA Trigger: GGCCCAGGAAGGACTGTTGAGTACTGTTATTCTCAACAGCCAGAATCTACTCACAGAAAGGGAAAAGCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS TCA 72 bp | ATTAAGCTCACCCAGGGACATTGTAGAGATCTCAGGTaGAGTAACAGTCATAGAAGTTGGGATTGTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: IKLTQGHCRDLR*SNSHRSWDCPT Trigger: AGTGGGACAATCCCAACTTCTATGACTGTTACTTCACCTGAGATCTCTACAATGTCCCTGGGTGAGCTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS GCA 72 bp | CTGCATCCAATCCTGTATCACCACCTTCACTTTGGATaGCTGACTTTTGAATGGAATCTTCCAACAAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LHPILYHHLHFG*LTFEWNLPTKH Trigger: ATGCTTTGTTGGAAGATTCCATTCAAAAGTCAGGCATCCAAAGTGAAGGTGGTGATACAGGATTGGATGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CCA 72 bp | AGCGTTTGTAGCTTTTCCCTTTCTGTGAGTAGATTCTaGCTGTTGAGAATAACAGTACTCAACAGTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SVCSFSLSVSRF*LLRITVLNSPS Trigger: GGAAGGACTGTTGAGTACTGTTATTCTCAACAGCCAGAATCTACTCACAGAAAGGGAAAAGCTACAAACGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 90 bp | GGCAAGGAGATGTTCAAGGACCATTTCAACATTGATTCCATCATTTaGGAGATTACACCTGAATTCACTTGGATCCCAGTGAATACTGCC | + |
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Preference number: 6 (lower is better) Translates to: GKEMFKDHFNIDSII*EITPEFTWIPVNTA Trigger: GGCAGTATTCACTGGGATCCAAGTGAATTCAGGTGTAATCTCCAAAATGATGGAATCAATGTTGAAATGGTCCTTGAACATCTCCTTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 90 bp | GGCACAACATGTTGGGCAAGGAGATGTTCAAGGACCATTTCAACATaGATTCCATCATTTTGGAGATTACACCTGAATTCACTTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: GTTCWARRCSRTIST*IPSFWRLHLNSLGS Trigger: GGATCCAAGTGAATTCAGGTGTAATCTCCAAAATGATGGAATCAATGTTGAAATGGTCCTTGAACATCTCCTTGCCCAACATGTTGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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| CDS CAA 72 bp | ATGTTCAAGGACCATTTCAACATTGATTCCATCATTTaGGAGATTACACCTGAATTCACTTGGATCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: MFKDHFNIDSII*EITPEFTWIPV Trigger: CACTGGGATCCAAGTGAATTCAGGTGTAATCTCCAAAATGATGGAATCAATGTTGAAATGGTCCTTGAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109753.3 |
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