Pregenerated sensors for BPIFA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027482Ensembl transcript IDs: ENSMUST00000028984.13, ENSMUST00000109746.8, ENSMUST00000125753.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCGGAAGTACCTCCTTCTaGTCAATGGCAGGCAATGGG | + |
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Preference number: 2 (lower is better) Translates to: SDLEFIVGKDRMFWDLGVGSTSF*SMAGNG Trigger: CCCATTGCCTGCCATTGATCAGAAGGAGGTACTTCC...GACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCGCAGAAGCCACACATTaGGGGAGACTTAAGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SDLEFIVGKDRMFWDLGVAEATH*GRLKVS Trigger: TGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGC...GACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCAGGGGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGCAATGGGAGGCTCCTaGAGTCTGGCAGCAGAGATC | + |
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Preference number: 3 (lower is better) Translates to: FSRGQQKPHIEGDLRSQSAMGGS*SLAAEI Trigger: GATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGC...CGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCCCCTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| 3UTR CCA 72 bp | TTAAGGTCTCAATCGGAAGTACCTCCTTCTGATCAATaGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LRSQSEVPPSDQ*QAMGGSLSLAA Trigger: TGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCATTGATCAGAAGGAGGTACTTCCGATTGAGACCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| 3UTR TCA 72 bp | AGCTGCCGGAGGATCTCACCAATCAGAGGACAGACCTaGCTTTCTACCAGATTTGGGATAACTTTCCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: SCRRISPIRGQT*LSTRFGITFPR Trigger: CCTAGGGAAAGTTATCCCAAATCTGGTAGAAAGTCAGGTCTGTCCTCTGATTGGTGAGATCCTCCGGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| 3UTR CCA 72 bp | TTTGGGATAACTTTCCCTAGGCTTTCTCTGAGGTTATaGAGAAAATGTTTCATCTTCGGTGAGGTTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: FGITFPRLSLRL*RKCFIFGEVSL Trigger: CAGGGAAACCTCACCGAAGATGAAACATTTTCTCCATAACCTCAGAGAAAGCCTAGGGAAAGTTATCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS-3UTR GCA 90 bp | GGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCTGACTGATTCAGGGTTGAGTCCAGGCCAAGGCTaGTTGGGCAGGGCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GNGRLLESGSRDLTDSGLSPGQG*LGRAEG Trigger: GCCCTCAGCCCTGCCCAAGCAGCCTTGGCCTGGACT...CAACCCTGAATCAGTCAGATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | CACATCCAGCTGCCGGAGGATCTCACCAATCAGAGGACAGACCTGACTTTCTACGCCAGGACTCTGCAGTaGGGCCCATGCAGGCATGCG | + |
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Preference number: 4 (lower is better) Translates to: HIQLPEDLTNQRTDLTFYARTLQ*GPCRHA Trigger: CGCATGCCTGCATGGGCCTCACTGCAGAGTCCTGGC...GTAGAAAGTCAGGTCTGTCCTCTGATTGGTGAGATCCTCCGGCAGCTGGATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTGATCAATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCCTCAGTGGACATGGATaGACCCCCACTGCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSDQWQAMGGSLSLAAEILSGHG*TPTAGL Trigger: GAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAG...GATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCATTGATCAGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | GGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCTGACTGATTCAGGGTTGTCCGTCCTTCTGCATTaGGCTTCAGGAGGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GNGRLLESGSRDLTDSGLSVLLH*ASGGPV Trigger: CACAGGGCCTCCTGAAGCTCAATGCAGAAGGACGGA...CAACCCTGAATCAGTCAGATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | GGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTGCCAGGACTCTGCAGTaGGGCCCATGCAGGCATGCG | + |
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Preference number: 4 (lower is better) Translates to: GQQKPHIEGDLRSQSEVPARTLQ*GPCRHA Trigger: CGCATGCCTGCATGGGCCTCACTGCAGAGTCCTGGC...AGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTGATCAATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCCTGGATCCGTCCTTCTaGATTGAGCTTCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PSDQWQAMGGSLSLAAEILDPSF*IELQEA Trigger: GGCCTCCTGAAGCTCAATGCAGAAGGACGGATCCAG...GATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCATTGATCAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | CCTTCTGATCAATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCTTGGGGAAAGCCATCTaGATCCCACCACAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSDQWQAMGGSLSLAAEILGKAI*IPPQSS Trigger: GCTGGACTGTGGTGGGATCCAGATGGCTTTCCCCAA...GATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCATTGATCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | CCTTCTGATCAATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCGTGAGGTTTCCTCAGTaGACATGGATGCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSDQWQAMGGSLSLAAEIVRFPQ*TWMHPH Trigger: GTGGGGGTGCATCCATGTCCACTGAGGAAACCTCAC...GATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCATTGATCAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTCCTGCTCCATTCGACACCTaGCCATCACCAGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QQKPHIEGDLRSQSEVPPAPFDT*PSPAPS Trigger: GGAGGGAGCTGGTGATGGGCAGGTGTCGAATGGAGC...AGGAGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | GGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTGCTCCATTCGACACCTaGCCATCACCAGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GQQKPHIEGDLRSQSEVPAPFDT*PSPAPS Trigger: GGAGGGAGCTGGTGATGGGCAGGTGTCGAATGGAGC...AGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | AGGGGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACTCAGTGGACATGGATaGACCCCCACTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQQKPHIEGDLRSQSEVLSGHG*TPTAGL Trigger: GAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAG...TACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | ATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCTGACTGATTCAAGCTTCACATCCAGCTaGCGGAGGATCTCACCAATC | + |
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Preference number: 4 (lower is better) Translates to: MAGNGRLLESGSRDLTDSSFTSS*RRISPI Trigger: GATTGGTGAGATCCTCCGGCAGCTGGATGTGAAGCT...TGAATCAGTCAGATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGGGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGCATCCTTGTGAGCCTTaGTCAGTCCAGGCCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSRGQQKPHIEGDLRSQSHPCEP*SVQAKA Trigger: AGCCTTGGCCTGGACTGACCAAGGCTCACAAGGATG...CGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCCCCTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGGGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGTGAGGTTTCCTCAGTaGACATGGATGCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FSRGQQKPHIEGDLRSQSVRFPQ*TWMHPH Trigger: GTGGGGGTGCATCCATGTCCACTGAGGAAACCTCAC...CGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCCCCTGGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | TTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCATTTTTGCCAGGACTCTGCAGTaGGGCCCATGCAGGCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LEFIVGKDRMFWDLGVIFARTLQ*GPCRHA Trigger: CGCATGCCTGCATGGGCCTCACTGCAGAGTCCTGGC...AAAAATGACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCATTTTTAGTCCAGGCCAAGGCTaGTTGGGCAGGGCTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LEFIVGKDRMFWDLGVIFSPGQG*LGRAEG Trigger: GCCCTCAGCCCTGCCCAAGCAGCCTTGGCCTGGACT...AAAAATGACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTGATCAATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCCTGATTTCTTGTTGCTaGTGGAAGTTCATGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: PSDQWQAMGGSLSLAAEILISCC*WKFMPP Trigger: TGGTGGCATGAACTTCCAGCAGCAACAAGAAATCAG...GATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCATTGATCAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | AGGCTTTCTCTGAGGTTATGGAGAAAATGTTTCATCTTCGGTGAGGTTTCCCTGGCTCCATTCGACACCTaGCCATCACCAGCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLSLRLWRKCFIFGEVSLAPFDT*PSPAPS Trigger: GGAGGGAGCTGGTGATGGGCAGGTGTCGAATGGAGC...CAGGGAAACCTCACCGAAGATGAAACATTTTCTCCATAACCTCAGAGAAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS-3UTR CCA 90 bp | GGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTAGAAGGCGCATGCTCTaGATCCGTCCTTCTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: GQQKPHIEGDLRSQSEVPRRRML*IRPSAL Trigger: CAATGCAGAAGGACGGATCCAGAGCATGCGCCTTCT...AGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | CTCACCAATCAGAGGACAGACCTGACTTTCTACCAGATTTGGGATAACTTTCCCTCAGCACACCCTCAGTaGACATGGATGCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LTNQRTDLTFYQIWDNFPSAHPQ*TWMHPH Trigger: GTGGGGGTGCATCCATGTCCACTGAGGGTGTGCTGA...GGGAAAGTTATCCCAAATCTGGTAGAAAGTCAGGTCTGTCCTCTGATTGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS-3UTR GCA 90 bp | CCCTTCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGCTGGATCCGTCCTTCTaGATTGAGCTTCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PFRLRVYCWKGQDVLGPGLDPSF*IELQEA Trigger: GGCCTCCTGAAGCTCAATGCAGAAGGACGGATCCAG...CCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | ACTTTCCCTAGGCTTTCTCTGAGGTTATGGAGAAAATGTTTCATCTTCGGTGAGCTCAGTGGACATGGATaGACCCCCACTGCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TFPRLSLRLWRKCFIFGELSGHG*TPTAGL Trigger: GAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAG...CTCACCGAAGATGAAACATTTTCTCCATAACCTCAGAGAAAGCCTAGGGAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS-3UTR CCA 90 bp | TCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCCATCCTTGTGAGCCTTaGTCAGTCCAGGCCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SDLEFIVGKDRMFWDLGVHPCEP*SVQAKA Trigger: AGCCTTGGCCTGGACTGACCAAGGCTCACAAGGATG...GACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | CCCTTCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGTTTCCTCAGTGGACATaGATGCACCCCCACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PFRLRVYCWKGQDVLGPGFPQWT*MHPHCW Trigger: CCAGCAGTGGGGGTGCATCCATGTCCACTGAGGAAA...CCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | GGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTATCAGAGGACAGACCTaGCTTTCTACCAGATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GQQKPHIEGDLRSQSEVPIRGQT*LSTRFG Trigger: CCCAAATCTGGTAGAAAGTCAGGTCTGTCCTCTGAT...AGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | CACATCCAGCTGCCGGAGGATCTCACCAATCAGAGGACAGACCTGACTTTCTACTTCAAGTGTGATGTTTaGAGAGAACCACTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HIQLPEDLTNQRTDLTFYFKCDV*REPLFG Trigger: CCCAAAGAGTGGTTCTCTGCAAACATCACACTTGAA...GTAGAAAGTCAGGTCTGTCCTCTGATTGGTGAGATCCTCCGGCAGCTGGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS-3UTR CCA 90 bp | TCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCAGAAGGCGCATGCTCTaGATCCGTCCTTCTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: SDLEFIVGKDRMFWDLGVRRRML*IRPSAL Trigger: CAATGCAGAAGGACGGATCCAGAGCATGCGCCTTCT...GACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | TTCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTTTGGGGAAAGCCATCTaGATCCCACCACAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FRLRVYCWKGQDVLGPGGLGKAI*IPPQSS Trigger: GCTGGACTGTGGTGGGATCCAGATGGCTTTCCCCAA...ACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | TTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCATTTTTTCCGTCCTTCTGCATTaGGCTTCAGGAGGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LEFIVGKDRMFWDLGVIFSVLLH*ASGGPV Trigger: CACAGGGCCTCCTGAAGCTCAATGCAGAAGGACGGA...AAAAATGACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | TTCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTAGCTTCACATCCAGCTaGCGGAGGATCTCACCAATC | + |
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Preference number: 4 (lower is better) Translates to: FRLRVYCWKGQDVLGPGGSFTSS*RRISPI Trigger: GATTGGTGAGATCCTCCGGCAGCTGGATGTGAAGCT...ACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | CTTTCTACCAGATTTGGGATAACTTTCCCTAGGCTTTCTCTGAGGTTATGGAGAGAGGGCAGGCATCCATaGAAAGTGTCATGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSTRFGITFPRLSLRLWREGRHP*KVSWFS Trigger: GCTGAACCATGACACTTTTCATGGATGCCTGCCCTC...TCTCCATAACCTCAGAGAAAGCCTAGGGAAAGTTATCCCAAATCTGGTAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS-3UTR GCA 90 bp | CCCTTCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGCCACCACAGTCCAGCTaGACATTGGTAATGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: PFRLRVYCWKGQDVLGPGPPQSS*TLVMLM Trigger: CATCAACATTACCAATGTGCAGCTGGACTGTGGTGG...CCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | TTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCATTTTTTTTCCTCAGTGGACATaGATGCACCCCCACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LEFIVGKDRMFWDLGVIFFPQWT*MHPHCW Trigger: CCAGCAGTGGGGGTGCATCCATGTCCACTGAGGAAA...AAAAATGACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAA 47% GC, longest homopolymer 8 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | TTCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTATCAGAGGACAGACCTaGCTTTCTACCAGATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FRLRVYCWKGQDVLGPGGIRGQT*LSTRFG Trigger: CCCAAATCTGGTAGAAAGTCAGGTCTGTCCTCTGAT...ACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTCCTTCTATGCTGATTTCTTGTTaGTGCTGGAAGTTCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: QKPHIEGDLRSQSEVPPSMLISC*CWKFMP Trigger: TGGCATGAACTTCCAGCAGCAACAAGAAATCAGCAT...AGAAGGAGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTCCTTCTTTCAAGTGTGATGTTTaGAGAGAACCACTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: QKPHIEGDLRSQSEVPPSFKCDV*REPLFG Trigger: CCCAAAGAGTGGTTCTCTGCAAACATCACACTTGAA...AGAAGGAGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | TCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCTCCCTAGGCTTTCTCTaGGGTTATGGAGAAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: SDLEFIVGKDRMFWDLGVSLGFL*GYGENV Trigger: AACATTTTCTCCATAACCTCAGAGAAAGCCTAGGGA...GACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR TCA 90 bp | TTCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTTCCCTAGGCTTTCTCTaGGGTTATGGAGAAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: FRLRVYCWKGQDVLGPGGSLGFL*GYGENV Trigger: AACATTTTCTCCATAACCTCAGAGAAAGCCTAGGGA...ACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCATTTTTCCACCACAGTCCAGCTaGACATTGGTAATGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: LEFIVGKDRMFWDLGVIFPPQSS*TLVMLM Trigger: CATCAACATTACCAATGTGCAGCTGGACTGTGGTGG...AAAAATGACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR GCA 90 bp | TTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCATTTTTTTCAAGTGTGATGTTTaGAGAGAACCACTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LEFIVGKDRMFWDLGVIFFKCDV*REPLFG Trigger: CCCAAAGAGTGGTTCTCTGCAAACATCACACTTGAA...AAAAATGACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | TTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCATTTTTATTTCTTGTTGCTGCTaGAAGTTCATGCCACCAATC | + |
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Preference number: 4 (lower is better) Translates to: LEFIVGKDRMFWDLGVIFISCCC*KFMPPI Trigger: GATTGGTGGCATGAACTTCCAGCAGCAACAAGAAAT...AAAAATGACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CCA 90 bp | GATCTCACCAATCAGAGGACAGACCTGACTTTCTACCAGATTTGGGATAACTTTTCATGGTTCAGCGTTTaGAAATTACAGAGAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: DLTNQRTDLTFYQIWDNFSWFSV*KLQREI Trigger: GATTTCTCTCTGTAATTTCCAAACGCTGAACCATGA...AAAGTTATCCCAAATCTGGTAGAAAGTCAGGTCTGTCCTCTGATTGGTGAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS TCA 90 bp | AGGCCCTGTGCAATAATTCTCGCTAGGGTGGACCGGCCATCCTTGTaGGCCTTGGTCAGTCCAGGCCAAGGCTGCTTGGGCAGGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RPCAIILARVDRPSL*ALVSPGQGCLGRAE Trigger: CTCAGCCCTGCCCAAGCAGCCTTGGCCTGGACTGACCAAGGCTCACAAGGATGGCCGGTCCACCCTAGCGAGAATTATTGCACAGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS GCA 90 bp | CAGTGGACATGGATGCACCCCCACTGCTGGGCTCCATTCGACACCTaGCCATCACCAGCTCCCTCCGGCCAAACTCATCTTTCTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QWTWMHPHCWAPFDT*PSPAPSGQTHLSPA Trigger: GGCTGGAGAAAGATGAGTTTGGCCGGAGGGAGCTGGTGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 ENSMUST00000125753.2 |
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| CDS CCA 90 bp | TCTTCGGTGAGGTTTCCTCAGTGGACATGGATGCACCCCCACTGCTaGGCTCCATTCGACACCTGCCCATCACCAGCTCCCTCCGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SSVRFPQWTWMHPHC*APFDTCPSPAPSGQ Trigger: TTGGCCGGAGGGAGCTGGTGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGAAACCTCACCGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CCA 90 bp | GAGAAATCAGCACACCCTCAGTGGACATGGATGCACCCCCACTGCTaGGCTCCATTCGACACCTGCCCATCACCAGCTCCCTCCGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: EKSAHPQWTWMHPHC*APFDTCPSPAPSGQ Trigger: TTGGCCGGAGGGAGCTGGTGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGGTGTGCTGATTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS GCA 90 bp | TTGGAAATTACAGAGAGAAATCAGCACACCCTCAGTGGACATGGATaGACCCCCACTGCTGGGCTCCATTCGACACCTGCCCATCACCAG | + |
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Preference number: 5 (lower is better) Translates to: LEITERNQHTLSGHG*TPTAGLHSTPAHHQ Trigger: CTGGTGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGGTGTGCTGATTTCTCTCTGTAATTTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS CCA 90 bp | GCGTTTGGAAATTACAGAGAGAAATCAGCACACCCTCAGTGGACATaGATGCACCCCCACTGCTGGGCTCCATTCGACACCTGCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: AFGNYREKSAHPQWT*MHPHCWAPFDTCPS Trigger: TGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGGTGTGCTGATTTCTCTCTGTAATTTCCAAACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS CCA 90 bp | GGTTCAGCGTTTGGAAATTACAGAGAGAAATCAGCACACCCTCAGTaGACATGGATGCACCCCCACTGCTGGGCTCCATTCGACACCTGC | + |
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Preference number: 5 (lower is better) Translates to: GSAFGNYREKSAHPQ*TWMHPHCWAPFDTC Trigger: GCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGGTGTGCTGATTTCTCTCTGTAATTTCCAAACGCTGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS GCA 90 bp | CACCAGCTCCCTCCGGCCAAACTCATCTTTCTCCAGCCAGGACTCTaGAGTGAGGCCCATGCAGGCATGCGTTTTGATGATATTCGAATT | + |
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Preference number: 5 (lower is better) Translates to: HQLPPAKLIFLQPGL*SEAHAGMRFDDIRI Trigger: AATTCGAATATCATCAAAACGCATGCCTGCATGGGCCTCACTGCAGAGTCCTGGCTGGAGAAAGATGAGTTTGGCCGGAGGGAGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 ENSMUST00000125753.2 |
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| CDS-3UTR CAA 90 bp | CCTTCTGATCAATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCGATGCTGATTTCTTGTaGCTGCTGGAAGTTCATGCC | + |
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Preference number: 5 (lower is better) Translates to: PSDQWQAMGGSLSLAAEIDADFL*LLEVHA Trigger: GGCATGAACTTCCAGCAGCAACAAGAAATCAGCATC...GATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCATTGATCAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CAA 90 bp | ATGGCAGGCAATGGGAGGCTCCTTGAGTCTGGCAGCAGAGATCTGACTGATTCAGATGCTGATTTCTTGTaGCTGCTGGAAGTTCATGCC | + |
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Preference number: 5 (lower is better) Translates to: MAGNGRLLESGSRDLTDSDADFL*LLEVHA Trigger: GGCATGAACTTCCAGCAGCAACAAGAAATCAGCATC...TGAATCAGTCAGATCTCTGCTGCCAGACTCAAGGAGCCTCCCATTGCCTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109746.8 |
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| CDS TCA 90 bp | TTCACATCCAGCTGCCGGAGGATCTCACCAATCAGAGGACAGACCTaGCTTTCTACCAGATTTGGGATAACTTTCCCTAGGCTTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FTSSCRRISPIRGQT*LSTRFGITFPRLSL Trigger: CAGAGAAAGCCTAGGGAAAGTTATCCCAAATCTGGTAGAAAGTCAGGTCTGTCCTCTGATTGGTGAGATCCTCCGGCAGCTGGATGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS GCA 90 bp | AACCACTCTTTGGGGAAAGCCATCTGGATCCCACCACAGTCCAGCTaGACATTGGTAATGTTGATGCTGATTTCTTGTTGCTGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NHSLGKAIWIPPQSS*TLVMLMLISCCCWK Trigger: CTTCCAGCAGCAACAAGAAATCAGCATCAACATTACCAATGTGCAGCTGGACTGTGGTGGGATCCAGATGGCTTTCCCCAAAGAGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CAA 90 bp | GGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTCAGTCCAGCTGCACATaGGTAATGTTGATGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: GQQKPHIEGDLRSQSEVPQSSCT*VMLMLI Trigger: AATCAGCATCAACATTACCAATGTGCAGCTGGACTG...AGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS GCA 90 bp | TCATCTTTCTCCAGCCAGGACTCTGCAGTGAGGCCCATGCAGGCATaGGTTTTGATGATATTCGAATTGAAGGGCAGTTTGAATTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SSFSSQDSAVRPMQA*VLMIFELKGSLNSM Trigger: CATTGAATTCAAACTGCCCTTCAATTCGAATATCATCAAAACGCATGCCTGCATGGGCCTCACTGCAGAGTCCTGGCTGGAGAAAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 ENSMUST00000125753.2 |
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| CDS-3UTR CAA 90 bp | GGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTGTTGATGCTGATTTCTaGTTGCTGCTGGAAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GQQKPHIEGDLRSQSEVPVDADF*LLLEVH Trigger: ATGAACTTCCAGCAGCAACAAGAAATCAGCATCAAC...AGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTACCTCCTTCTCAGTCCAGCTGCACATaGGTAATGTTGATGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: QKPHIEGDLRSQSEVPPSQSSCT*VMLMLI Trigger: AATCAGCATCAACATTACCAATGTGCAGCTGGACTG...AGAAGGAGGTACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CAA 90 bp | AGGGGACAGCAGAAGCCACACATTGAGGGAGACTTAAGGTCTCAATCGGAAGTATGCACATTGGTAATGTaGATGCTGATTTCTTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: RGQQKPHIEGDLRSQSEVCTLVM*MLISCC Trigger: GCAACAAGAAATCAGCATCAACATTACCAATGTGCA...TACTTCCGATTGAGACCTTAAGTCTCCCTCAATGTGTGGCTTCTGCTGTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CAA 90 bp | TCAGACTTAGAGTTTATTGTTGGAAAGGACAGGATGTTTTGGGACCTGGGGGTCGTTGATGCTGATTTCTaGTTGCTGCTGGAAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SDLEFIVGKDRMFWDLGVVDADF*LLLEVH Trigger: ATGAACTTCCAGCAGCAACAAGAAATCAGCATCAAC...GACCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CCA 90 bp | TCTACCAGATTTGGGATAACTTTCCCTAGGCTTTCTCTGAGGTTATaGAGAAAATGTTTCATCTTCGGTGAGGTTTCCTCAGTGGACATG | + |
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Preference number: 5 (lower is better) Translates to: STRFGITFPRLSLRL*RKCFIFGEVSSVDM Trigger: CATGTCCACTGAGGAAACCTCACCGAAGATGAAACATTTTCTCCATAACCTCAGAGAAAGCCTAGGGAAAGTTATCCCAAATCTGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS-3UTR CAA 90 bp | ACTTTCCCTAGGCTTTCTCTGAGGTTATGGAGAAAATGTTTCATCTTCGGTGAGGTCATGGTTCAGCGTTaGGAAATTACAGAGAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: TFPRLSLRLWRKCFIFGEVMVQR*EITERN Trigger: ATTTCTCTCTGTAATTTCCAAACGCTGAACCATGAC...CTCACCGAAGATGAAACATTTTCTCCATAACCTCAGAGAAAGCCTAGGGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS CCA 72 bp | TTCTCGCTAGGGTGGACCGGCCATCCTTGTGAGCCTTaGTCAGTCCAGGCCAAGGCTGCTTGGGCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSLGWTGHPCEP*SVQAKAAWAGL Trigger: CAGCCCTGCCCAAGCAGCCTTGGCCTGGACTGACCAAGGCTCACAAGGATGGCCGGTCCACCCTAGCGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CCA 72 bp | GCACACCCTCAGTGGACATGGATGCACCCCCACTGCTaGGCTCCATTCGACACCTGCCCATCACCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AHPQWTWMHPHC*APFDTCPSPAP Trigger: GGGAGCTGGTGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGGTGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS GCA 72 bp | TGGATGCACCCCCACTGCTGGGCTCCATTCGACACCTaGCCATCACCAGCTCCCTCCGGCCAAACTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: WMHPHCWAPFDT*PSPAPSGQTHL Trigger: AAGATGAGTTTGGCCGGAGGGAGCTGGTGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 ENSMUST00000125753.2 |
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| CDS CCA 72 bp | AGGTTTCCTCAGTGGACATGGATGCACCCCCACTGCTaGGCTCCATTCGACACCTGCCCATCACCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RFPQWTWMHPHC*APFDTCPSPAP Trigger: GGGAGCTGGTGATGGGCAGGTGTCGAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGAAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CAA 90 bp | TTCAGACGGTCCAGAAGGCGCATGCTCTGGATCCGTCCTTCTGCATaGAGCTTCAGGAGGCCCTGTGCAATAATTCTCGCTAGGGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FRRSRRRMLWIRPSA*SFRRPCAIILARVD Trigger: GTCCACCCTAGCGAGAATTATTGCACAGGGCCTCCTGAAGCTCAATGCAGAAGGACGGATCCAGAGCATGCGCCTTCTGGACCGTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CAA 72 bp | TCCAGAAGGCGCATGCTCTGGATCCGTCCTTCTGCATaGAGCTTCAGGAGGCCCTGTGCAATAATTCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRRRMLWIRPSA*SFRRPCAIILA Trigger: AGCGAGAATTATTGCACAGGGCCTCCTGAAGCTCAATGCAGAAGGACGGATCCAGAGCATGCGCCTTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CCA 72 bp | GGAGAAAATGTTTCATCTTCGGTGAGGTTTCCTCAGTaGACATGGATGCACCCCCACTGCTGGGCTCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: GENVSSSVRFPQ*TWMHPHCWAPF Trigger: GAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGAAACCTCACCGAAGATGAAACATTTTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CCA 72 bp | TTTGGAAATTACAGAGAGAAATCAGCACACCCTCAGTaGACATGGATGCACCCCCACTGCTGGGCTCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: FGNYREKSAHPQ*TWMHPHCWAPF Trigger: GAATGGAGCCCAGCAGTGGGGGTGCATCCATGTCCACTGAGGGTGTGCTGATTTCTCTCTGTAATTTCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS GCA 72 bp | TGCACATTGGTAATGTTGATGCTGATTTCTTGTTGCTaGTGGAAGTTCATGCCACCAATCAGCCAGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: CTLVMLMLISCC*WKFMPPISQPT Trigger: GGTGGGCTGGCTGATTGGTGGCATGAACTTCCAGCAGCAACAAGAAATCAGCATCAACATTACCAATGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS GCA 72 bp | AGCTGCACATTGGTAATGTTGATGCTGATTTCTTGTTaGTGCTGGAAGTTCATGCCACCAATCAGCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SCTLVMLMLISC*CWKFMPPISQP Trigger: GGGCTGGCTGATTGGTGGCATGAACTTCCAGCAGCAACAAGAAATCAGCATCAACATTACCAATGTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CAA 72 bp | AAAGCCATCTGGATCCCACCACAGTCCAGCTGCACATaGGTAATGTTGATGCTGATTTCTTGTTGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KAIWIPPQSSCT*VMLMLISCCCW Trigger: CCAGCAGCAACAAGAAATCAGCATCAACATTACCAATGTGCAGCTGGACTGTGGTGGGATCCAGATGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CAA 90 bp | AAAGCCATCTGGATCCCACCACAGTCCAGCTGCACATTGGTAATGTaGATGCTGATTTCTTGTTGCTGCTGGAAGTTCATGCCACCAATC | + |
|
Preference number: 6 (lower is better) Translates to: KAIWIPPQSSCTLVM*MLISCCCWKFMPPI Trigger: GATTGGTGGCATGAACTTCCAGCAGCAACAAGAAATCAGCATCAACATTACCAATGTGCAGCTGGACTGTGGTGGGATCCAGATGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CAA 90 bp | TCTTTGGGGAAAGCCATCTGGATCCCACCACAGTCCAGCTGCACATaGGTAATGTTGATGCTGATTTCTTGTTGCTGCTGGAAGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SLGKAIWIPPQSSCT*VMLMLISCCCWKFM Trigger: CATGAACTTCCAGCAGCAACAAGAAATCAGCATCAACATTACCAATGTGCAGCTGGACTGTGGTGGGATCCAGATGGCTTTCCCCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS TCA 72 bp | TTCTCTGAGGTTATGGAGAAAATGTTTCATCTTCGGTaGGGTTTCCTCAGTGGACATGGATGCACCCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FSEVMEKMFHLR*GFLSGHGCTPT Trigger: AGTGGGGGTGCATCCATGTCCACTGAGGAAACCTCACCGAAGATGAAACATTTTCTCCATAACCTCAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CAA 72 bp | TGGATCCCACCACAGTCCAGCTGCACATTGGTAATGTaGATGCTGATTTCTTGTTGCTGCTGGAAGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: WIPPQSSCTLVM*MLISCCCWKFM Trigger: CATGAACTTCCAGCAGCAACAAGAAATCAGCATCAACATTACCAATGTGCAGCTGGACTGTGGTGGGATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 |
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| CDS CAA 72 bp | GGGCAGGCATCCATGAAAAGTGTCATGGTTCAGCGTTaGGAAATTACAGAGAGAAATCAGCACACCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GQASMKSVMVQR*EITERNQHTLS Trigger: ACTGAGGGTGTGCTGATTTCTCTCTGTAATTTCCAAACGCTGAACCATGACACTTTTCATGGATGCCTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125753.2 |
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| CDS CAA 90 bp | TCTGCAGTGAGGCCCATGCAGGCATGCGTTTTGATGATATTCGAATaGAAGGGCAGTTTGAATTCAATGTCAAATTCAAGTGTGATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SAVRPMQACVLMIFE*KGSLNSMSNSSVMF Trigger: AAACATCACACTTGAATTTGACATTGAATTCAAACTGCCCTTCAATTCGAATATCATCAAAACGCATGCCTGCATGGGCCTCACTGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 ENSMUST00000125753.2 |
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| CDS CAA 72 bp | AGGCCCATGCAGGCATGCGTTTTGATGATATTCGAATaGAAGGGCAGTTTGAATTCAATGTCAAATTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPMQACVLMIFE*KGSLNSMSNSS Trigger: ACTTGAATTTGACATTGAATTCAAACTGCCCTTCAATTCGAATATCATCAAAACGCATGCCTGCATGGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028984.13 ENSMUST00000109746.8 ENSMUST00000125753.2 |
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