Pregenerated sensors for BPIFA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042459Ensembl transcript IDs: ENSMUST00000048103.9, ENSMUST00000145388.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTGTaGATGATAGTAGCACTTTCTAGAGGGAAATGCCAT | + |
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Preference number: 3 (lower is better) Translates to: GRVLWVVSGRNV*MIVALSRGKCH Trigger: ATGGCATTTCCCTCTAGAAAGTGCTACTATCATCCACACATTTCTACCTGAGACCACCCAAAGGACCCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| 3UTR CCA 72 bp | ACTACTCAGAGAGGAAGAGAATTTGGGAGGGTCCTTTaGGTGGTCTCAGGTAGAAATGTGTGGATGATAGTA | + |
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Preference number: 3 (lower is better) Translates to: TTQRGREFGRVL*VVSGRNVWMIV Trigger: TACTATCATCCACACATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCTGAGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR TCA 90 bp | CTCAGAGAGGAAGAGAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTCCAGATTCAGGTTCTaGGGGACAGCTTCAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LREEENLGGSFGWSQVEMSRFRF*GTASEG Trigger: TCCCTCTGAAGCTGTCCCTCAGAACCTGAATCTGGA...CATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR TCA 90 bp | AAGATGAAACCACTGGAGAGTAGCCAGCAGGAGAGTTGTGGCATCCTTCTGTTCGTGCTGAGGACGTACTaGAGCAATGGACATAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KMKPLESSQQESCGILLFVLRTY*SNGHRK Trigger: CTTCCTATGTCCATTGCTTCAGTACGTCCTCAGCAC...GAACAGAAGGATGCCACAACTCTCCTGCTGGCTACTCTCCAGTGGTTTCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR TCA 90 bp | AGAAGTAAGATGAAACCACTGGAGAGTAGCCAGCAGGAGAGTTGTGGCATCCTTACTCTGAGTTCCCAATaGGCAGGCCACACAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: RSKMKPLESSQQESCGILTLSSQ*AGHTRQ Trigger: TTGTCTTGTGTGGCCTGCTCATTGGGAACTCAGAGT...AAGGATGCCACAACTCTCCTGCTGGCTACTCTCCAGTGGTTTCATCTTACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR TCA 90 bp | AAACCACTGGAGAGTAGCCAGCAGGAGAGTTGTGGCATCCTTCTGTTCTTCCTCTTAGAGAGGAGACCCTaGAGAACACTTGGATTCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPLESSQQESCGILLFFLLERRP*RTLGFS Trigger: ACTGAATCCAAGTGTTCTTCAGGGTCTCCTCTCTAA...GAGGAAGAACAGAAGGATGCCACAACTCTCCTGCTGGCTACTCTCCAGTGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR CCA 90 bp | AGAGAGGAAGAGAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTGTACCCTGAAGAACACTTaGATTCAGTGTGCTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: REEENLGGSFGWSQVEMCTLKNT*IQCAED Trigger: GTCCTCAGCACACTGAATCCAAGTGTTCTTCAGGGT...ACACATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR GCA 90 bp | CTCAGAGAGGAAGAGAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTCAACGTTTCTAGAATaGTGTTCTTGGCTAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LREEENLGGSFGWSQVEMSTFLE*CSWLMA Trigger: GGCCATTAGCCAAGAACAGCATTCTAGAAACGTTGA...CATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR CCA 90 bp | AGAAGTAAGATGAAACCACTGGAGAGTAGCCAGCAGGAGAGTTGTGGCATCCTTCTAGAATGCTGTTCTTaGCTAATGGCCAACTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSKMKPLESSQQESCGILLECCS*LMANLW Trigger: CCACAAGTTGGCCATTAGCCAAGAACAGCATTCTAG...AAGGATGCCACAACTCTCCTGCTGGCTACTCTCCAGTGGTTTCATCTTACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR GCA 90 bp | TTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTGTGGATGATAGTAGCAGGACATAGGAAGTTTTaGAGGACGGTTGACAATGTA | + |
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Preference number: 4 (lower is better) Translates to: FGRVLWVVSGRNVWMIVAGHRKF*RTVDNV Trigger: TACATTGTCAACCGTCCTGCAAAACTTCCTATGTCC...TGCTACTATCATCCACACATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR TCA 90 bp | GAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTGTGGATGATAGTAGAAGACAGCTTAGCTTaGAAATCCAGGACTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: EFGRVLWVVSGRNVWMIVEDSLA*KSRTLR Trigger: TCTCAAAGTCCTGGATTTTCAAGCTAAGCTGTCTTC...TACTATCATCCACACATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR TCA 90 bp | AGAGAGGAAGAGAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTGTGGTTTTAATGGAGAGTaGATTTATGAGGTCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: REEENLGGSFGWSQVEMCGFNGE*IYEVQG Trigger: TCCTTGGACCTCATAAATTCACTCTCCATTAAAACC...ACACATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR CCA 90 bp | GTCCTTTGGGTGGTCTCAGGTAGAAATGTGTGGATGATAGTAGCACTTTCTAGATTTTATCTGTATTACTaGAGCATTTGCCTATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VLWVVSGRNVWMIVALSRFYLYY*SICLWS Trigger: TGACCATAGGCAAATGCTCCAGTAATACAGATAAAA...TCTAGAAAGTGCTACTATCATCCACACATTTCTACCTGAGACCACCCAAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS TCA 90 bp | GGTCACCTCAGGAAGGCCAGTCTGGGCATTGGTTTTAATGGAGAGTaGATTTATGAGGTCCAAGGAAACAGAAATGTCGACCGTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: GHLRKASLGIGFNGE*IYEVQGNRNVDRLA Trigger: GGCAAGACGGTCGACATTTCTGTTTCCTTGGACCTCATAAATTCACTCTCCATTAAAACCAATGCCCAGACTGGCCTTCCTGAGGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS-3UTR CAA 90 bp | AGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTGTGGATGATAGTAGCACTTTCTTGGCTAATGGCCAACTaGTGGCTTGCTGAAGCAACT | + |
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Preference number: 5 (lower is better) Translates to: RVLWVVSGRNVWMIVALSWLMAN*WLAEAT Trigger: AGTTGCTTCAGCAAGCCACAAGTTGGCCATTAGCCA...AGAAAGTGCTACTATCATCCACACATTTCTACCTGAGACCACCCAAAGGACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR CAA 90 bp | TTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTGTGGATGATAGTAGCAAGGCCAGTCTGGGCATaGGTTTTAATGGAGAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: FGRVLWVVSGRNVWMIVARPVWA*VLMESE Trigger: TTCACTCTCCATTAAAACCAATGCCCAGACTGGCCT...TGCTACTATCATCCACACATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR CAA 90 bp | ACTCAGAGAGGAAGAGAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGGAAGACAGCTTAGCTaGAAAATCCAGGACTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: TQRGREFGRVLWVVSGRNGRQLS*KIQDFE Trigger: CTCAAAGTCCTGGATTTTCAAGCTAAGCTGTCTTCC...ATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS-3UTR CAA 90 bp | ACTACTCAGAGAGGAAGAGAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGACCATCCAGAATACTGTaGATGATGGGTAATCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: TTQRGREFGRVLWVVSGRPSRIL*MMGNRL Trigger: AAGACGATTACCCATCATCAACAGTATTCTGGATGG...TCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCTGAGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS CCA 90 bp | GTATTACTGGAGCATTTGCCTATGGTCACCTCAGGAAGGCCAGTCTaGGCATTGGTTTTAATGGAGAGTGAATTTATGAGGTCCAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: VLLEHLPMVTSGRPV*ALVLMESEFMRSKE Trigger: TTCCTTGGACCTCATAAATTCACTCTCCATTAAAACCAATGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAAATGCTCCAGTAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS-3UTR CAA 90 bp | ACTCAGAGAGGAAGAGAATTTGGGAGGGTCCTTTGGGTGGTCTCAGGTAGAAATGTAAAGCTTTTTAAATaGCCAAGGTCCGCTGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: TQRGREFGRVLWVVSGRNVKLFK*PRSAVF Trigger: GAACACAGCGGACCTTGGCAATTTAAAAAGCTTTAC...ATTTCTACCTGAGACCACCCAAAGGACCCTCCCAAATTCTCTTCCTCTCTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS TCA 90 bp | GGCACCGTCAGATCAATGCCATTGCCGTTGGAAGACAGCTTAGCTTaGAAATCCAGGACTTTGAGATTATTGATTTTCAACAATAAACCA | + |
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Preference number: 5 (lower is better) Translates to: GTVRSMPLPLEDSLA*KSRTLRLLIFNNKP Trigger: TGGTTTATTGTTGAAAATCAATAATCTCAAAGTCCTGGATTTTCAAGCTAAGCTGTCTTCCAACGGCAATGGCATTGATCTGACGGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CAA 90 bp | GAGAGTGAATTTATGAGGTCCAAGGAAACAGAAATGTCGACCGTCTaGCCAATGAAAGGCAGAACCAAGGAGGCTTCCCCAGCCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ESEFMRSKETEMSTV*PMKGRTKEASPAKG Trigger: GCCCTTGGCTGGGGAAGCCTCCTTGGTTCTGCCTTTCATTGGCAAGACGGTCGACATTTCTGTTTCCTTGGACCTCATAAATTCACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CCA 72 bp | GGTCCGCTGTGTTCAACGTTTCTAGAATGCTGTTCTTaGCTAATGGCCAACTTGTGGCTTGCTGAAGCAACT | + |
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Preference number: 6 (lower is better) Translates to: GPLCSTFLECCS*LMANLWLAEAT Trigger: AGTTGCTTCAGCAAGCCACAAGTTGGCCATTAGCCAAGAACAGCATTCTAGAAACGTTGAACACAGCGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CAA 72 bp | TTTATGAGGTCCAAGGAAACAGAAATGTCGACCGTCTaGCCAATGAAAGGCAGAACCAAGGAGGCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: FMRSKETEMSTV*PMKGRTKEASP Trigger: TGGGGAAGCCTCCTTGGTTCTGCCTTTCATTGGCAAGACGGTCGACATTTCTGTTTCCTTGGACCTCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CAA 90 bp | CTGGAGCATTTGCCTATGGTCACCTCAGGAAGGCCAGTCTGGGCATaGGTTTTAATGGAGAGTGAATTTATGAGGTCCAAGGAAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: LEHLPMVTSGRPVWA*VLMESEFMRSKETE Trigger: TTCTGTTTCCTTGGACCTCATAAATTCACTCTCCATTAAAACCAATGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAAATGCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CCA 72 bp | GAGCATTTGCCTATGGTCACCTCAGGAAGGCCAGTCTaGGCATTGGTTTTAATGGAGAGTGAATTTATGAGG | + |
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Preference number: 6 (lower is better) Translates to: EHLPMVTSGRPV*ALVLMESEFMR Trigger: CCTCATAAATTCACTCTCCATTAAAACCAATGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAAATGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CAA 72 bp | TTGCCTATGGTCACCTCAGGAAGGCCAGTCTGGGCATaGGTTTTAATGGAGAGTGAATTTATGAGGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LPMVTSGRPVWA*VLMESEFMRSK Trigger: CTTGGACCTCATAAATTCACTCTCCATTAAAACCAATGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS TCA 72 bp | AGAGGAGACCCTGAAGAACACTTGGATTCAGTGTGCTaGGGACGTACTGAAGCAATGGACATAGGAAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RGDPEEHLDSVC*GRTEAMDIGSF Trigger: AAAACTTCCTATGTCCATTGCTTCAGTACGTCCTCAGCACACTGAATCCAAGTGTTCTTCAGGGTCTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048103.9 |
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| CDS GCA 72 bp | AGGAAATGGAGATTTTATCTGTATTACTGGAGCATTTaGCTATGGTCACCTCAGGAAGGCCAGTCTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RKWRFYLYYWSI*LWSPQEGQSGH Trigger: ATGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAAATGCTCCAGTAATACAGATAAAATCTCCATTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CCA 72 bp | TTTCTAGAATGCTGTTCTTGGCTAATGGCCAACTTGTaGCTTGCTGAAGCAACTCCACATCCAGATTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: FLECCSWLMANL*LAEATPHPDSG Trigger: ACCTGAATCTGGATGTGGAGTTGCTTCAGCAAGCCACAAGTTGGCCATTAGCCAAGAACAGCATTCTAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CCA 72 bp | TGGAGATTTTATCTGTATTACTGGAGCATTTGCCTATaGTCACCTCAGGAAGGCCAGTCTGGGCATTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: WRFYLYYWSICL*SPQEGQSGHWF Trigger: AAACCAATGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAAATGCTCCAGTAATACAGATAAAATCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CAA 72 bp | AAGGAAATGGAGATTTTATCTGTATTACTGGAGCATTaGCCTATGGTCACCTCAGGAAGGCCAGTCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: KEMEILSVLLEH*PMVTSGRPVWA Trigger: TGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAAATGCTCCAGTAATACAGATAAAATCTCCATTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CAA 90 bp | CTTCCCAACAAGGAAATGGAGATTTTATCTGTATTACTGGAGCATTaGCCTATGGTCACCTCAGGAAGGCCAGTCTGGGCATTGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LPNKEMEILSVLLEH*PMVTSGRPVWALVL Trigger: TAAAACCAATGCCCAGACTGGCCTTCCTGAGGTGACCATAGGCAAATGCTCCAGTAATACAGATAAAATCTCCATTTCCTTGTTGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS TCA 72 bp | AGGAAGGCCAGTCTGGGCATTGGTTTTAATGGAGAGTaGATTTATGAGGTCCAAGGAAACAGAAATGTCGAC | + |
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Preference number: 6 (lower is better) Translates to: RKASLGIGFNGE*IYEVQGNRNVD Trigger: GTCGACATTTCTGTTTCCTTGGACCTCATAAATTCACTCTCCATTAAAACCAATGCCCAGACTGGCCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS TCA 72 bp | AGATCAATGCCATTGCCGTTGGAAGACAGCTTAGCTTaGAAATCCAGGACTTTGAGATTATTGATTTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: RSMPLPLEDSLA*KSRTLRLLIFN Trigger: GTTGAAAATCAATAATCTCAAAGTCCTGGATTTTCAAGCTAAGCTGTCTTCCAACGGCAATGGCATTGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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| CDS CAA 72 bp | AACAATAAACCATTCAAAGATGTAAAGCTTTTTAAATaGCCAAGGTCCGCTGTGTTCAACGTTTCTAGAATG | + |
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Preference number: 6 (lower is better) Translates to: NNKPFKDVKLFK*PRSAVFNVSRM Trigger: CATTCTAGAAACGTTGAACACAGCGGACCTTGGCAATTTAAAAAGCTTTACATCTTTGAATGGTTTATTGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048103.9 ENSMUST00000145388.2 |
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