Pregenerated sensors for BPI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052922Ensembl transcript IDs: ENSMUST00000065039.3, ENSMUST00000109499.8, ENSMUST00000109500.8
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCCCCGGTACACAGATCTCCTGCTTTCCCCTCAGCTTCAGCATaGGGAAGCAAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAAT | + |
|
Preference number: 1 (lower is better) Translates to: RAPVHRSPAFPSASA*GSKQEATGQGQRLN Trigger: ATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTTGCTTCCCCATGCTGAAGCTGAGGGGAAAGCAGGAGATCTGTGTACCGGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCGCCCCTCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCATGTGATGGGAGCAGCTaGAGAGCTTCCTGGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CRPSSGNADAGGAALKEACDGSS*RASWPR Trigger: CCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACA...TGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGAGGGGCGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGAGCTGCAGAGCTTCCTaGCCCAGGGTCCAAGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PLQRKCGCWRGCSERGTGSCRAS*PRVQGD Trigger: ATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCT...CCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCCCCTCAGCTTCAGCATaGGGAAGCAAGCAGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SSGNADAGGAALKEAQGPPSASA*GSKQEA Trigger: AGCCTCCTGCTTGCTTCCCCATGCTGAAGCTGAGGG...GGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGA 62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| 3UTR TCA 72 bp | CCTCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTaGAAGAGGCACAGGGCCCCGGTACACAGATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPAEMRMLEGLL*KRHRAPVHRSP Trigger: AGGAGATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| 3UTR GCA 72 bp | CCCAAAGTAATGTCGCCCCTCCAGCGGAAATGCGGATaGTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PKVMSPLQRKCG*WRGCSERGTGP Trigger: GGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGAGGGGCGACATTACTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| 3UTR GCA 72 bp | TGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTaGAGAGCTTCCTGGCCCAGGGTCCAAGGTGATATC | + |
|
Preference number: 3 (lower is better) Translates to: WSRTAGECDGSS*RASWPRVQGDI Trigger: GATATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| 3UTR GCA 72 bp | GTAAAGCCCAAAGTAATGTCGCCCCTCCAGCGGAAATaGGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VKPKVMSPLQRK*GCWRGCSERGT Trigger: TGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGAGGGGCGACATTACTTTGGGCTTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGCCTTCTGGGAGATCATaGCCACGAAGCCAGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGQPVSVMGAAAELPGPGPSGRS*PRSQGR Trigger: CCGACCCTGGCTTCGTGGCCATGATCTCCCAGAAGG...CCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | CCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGTCAGGGCTGTGCCAATaGTGGCCAGCAGCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSVMGAAAELPGPGSKVSGLCQ*WPAATG Trigger: CCCTGTTGCTGCTGGCCATCATTGGCACAGCCCTGA...CACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGATAGCACGGGCGCTGAGATaGGCAGCTGCACCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVMGAAAELPGPGSKVIARALR*AAAPPC Trigger: GCATGGGGGTGCAGCTGCTCATCTCAGCGCCCGTGC...TATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | CCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGGCAGCTGCACCCCCATaGTGGGGAACATCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSVMGAAAELPGPGSKVAAAPP*WGTSWP Trigger: TGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGC...CACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGCAGCTGCACCCCCATaGTGGGGAACATCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGECDGSSCRASWPRVQGAAAPP*WGTSWP Trigger: TGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGC...ACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | TGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACACAGATGGCCTGAGGGCTGTATaGTCAGGTGCACAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CGCWRGCSERGTGPRYTDGLRAV*SGAQAR Trigger: CCGTGCCTGTGCACCTGAGCATACAGCCCTCAGGCC...ATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTTGGAGCAGATGGTGGTaGTGTGGCCTGAGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGECDGSSCRASWPRVQGWSRWW*CGLRSH Trigger: GTGACTCCTCAGGCCACATCACCACCATCTGCTCCA...ACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTCTCATTACTGGCGGGTaGATGGGAAGTGGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGECDGSSCRASWPRVQGLITGG*MGSGSR Trigger: CCGAGACCCACTTCCCATTCACCCGCCAGTAATGAG...ACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | TGTCGCCCCTCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCATCAACCACTCCCTGCTaGCACGCGAAGTCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: CRPSSGNADAGGAALKEASTTPC*HAKSRP Trigger: GGGTCTGGACTTCGCGTGCCAGCAGGGAGTGGTTGA...TGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGAGGGGCGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGCAGATGGTGGTGATGTaGCCTGAGGAGTCACTACCC | + |
|
Preference number: 4 (lower is better) Translates to: AGQPVSVMGAAAELPGPGQMVVM*PEESLP Trigger: GGGTAGTGACTCCTCAGGCCACATCACCACCATCTG...CCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCTGCTGGGGAACATCTTaGCCACCTTGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGNADAGGAALKEAQGPCWGTS*PPWAGR Trigger: CCTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCA...GGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGGTGGTGATGTGGCCTaGGGAGTCACTACCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPVSVMGAAAELPGPGSKGGDVA*GVTTQN Trigger: ATTCTGGGTAGTGACTCCTCAGGCCACATCACCACC...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GGCACAGGGCCCCGGTACACAGATCTCCTGCTTTCCCCTCAGCTTCAGCATGGGTGGAGCAGATGGTGGTaGTGTGGCCTGAGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPRYTDLLLSPQLQHGWSRWW*CGLRSH Trigger: GTGACTCCTCAGGCCACATCACCACCATCTGCTCCA...CCCATGCTGAAGCTGAGGGGAAAGCAGGAGATCTGTGTACCGGGGCCCTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | TGTCGCCCCTCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACTCATTACTGGCGGGTaGATGGGAAGTGGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CRPSSGNADAGGAALKEALITGG*MGSGSR Trigger: CCGAGACCCACTTCCCATTCACCCGCCAGTAATGAG...TGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGAGGGGCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGGCACGGGCGCTGAGATaGGCAGCTGCACCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGQRLNRIPGAGQPVSVARALR*AAAPPC Trigger: GCATGGGGGTGCAGCTGCTCATCTCAGCGCCCGTGC...CACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACGCAGCCTCTCATTaGTCTTGGGCAGCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRKCGCWRGCSERGTGPRYAASH*SWAALV Trigger: CACTAGTGCTGCCCAAGATCAATGAGAGGCTGCGTA...CCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | TGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACACAGATTCAGGTCGGTGGAGATaGAGACGCCCTGGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCWRGCSERGTGPRYTDSGRWR*RRPGCS Trigger: TGAGCATCCAGGGCGTCTCCATCTCCACCGACCTGA...ATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGCAGATGGTGGTGATGTaGCCTGAGGAGTCACTACCC | + |
|
Preference number: 4 (lower is better) Translates to: QPVSVMGAAAELPGPGSKQMVVM*PEESLP Trigger: GGGTAGTGACTCCTCAGGCCACATCACCACCATCTG...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACAAACTCCCCCTTTAGCTaGCCCTCCAGGAACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNADAGGAALKEAQGPGTNSPFS*PSRNWF Trigger: GAACCAGTTCCTGGAGGGGCAGCTAAAGGGGGAGTT...TGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACACAGATGGTGGTGATGTaGCCTGAGGAGTCACTACCC | + |
|
Preference number: 4 (lower is better) Translates to: GNADAGGAALKEAQGPGTQMVVM*PEESLP Trigger: GGGTAGTGACTCCTCAGGCCACATCACCACCATCTG...TGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAGCACGGGCGCTGAGATaGGCAGCTGCACCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGARALR*AAAPPC Trigger: GCATGGGGGTGCAGCTGCTCATCTCAGCGCCCGTGC...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGATAACTCCCCCTTTAGCTaGCCCTCCAGGAACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GECDGSSCRASWPRVQGDNSPFS*PSRNWF Trigger: GAACCAGTTCCTGGAGGGGCAGCTAAAGGGGGAGTT...ATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | TGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACACAGATCCCCAGCATGCTGCCTaGGATTTTGATATGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: CGCWRGCSERGTGPRYTDPQHAA*DFDMDT Trigger: AGTGTCCATATCAAAATCTCAGGCAGCATGCTGGGG...ATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGCATGCATACCATGTATaGACCGTTGGGCACAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QPVSVMGAAAELPGPGSKHAYHV*TVGHKP Trigger: AGGTTTGTGCCCAACGGTGCATACATGGTATGCATG...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAAGTCAGAGATGCCCATaGATACCATGTATGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGQPVSVMGAAAELPGPSQRCP*IPCMHR Trigger: ACGGTGCATACATGGTATGCATGGGCATCTCTGACT...TGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGGGCCTGAGGGCTGTATaGTCAGGTGCACAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QEATGQGQRLNRIPGAGQGLRAV*SGAQAR Trigger: CCGTGCCTGTGCACCTGAGCATACAGCCCTCAGGCC...CTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGGCCTGAGGGCTGTATaGTCAGGTGCACAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TGQGQRLNRIPGAGQPVSGLRAV*SGAQAR Trigger: CCGTGCCTGTGCACCTGAGCATACAGCCCTCAGGCC...ACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGCCTTCTGGGAGATCATaGCCACGAAGCCAGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQGQRLNRIPGAGQPVSVPSGRS*PRSQGR Trigger: CCGACCCTGGCTTCGTGGCCATGATCTCCCAGAAGG...CACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGATAAGGCTGCAGTTTaGAGGACACAGAGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGECDGSSCRASWPRVQGDKAAV*RTQSLS Trigger: TGAGAGACTCTGTGTCCTCCAAACTGCAGCCTTATC...ACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | AGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTTCAGGGCTGTGCCAATaGTGGCCAGCAGCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLNRIPGAGQPVSVMGAASGLCQ*WPAATG Trigger: CCCTGTTGCTGCTGGCCATCATTGGCACAGCCCTGA...AGCTGCTCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | CCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGCCAATACCTCAGTGTTaGAGAAGTAGTCAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSVMGAAAELPGPGSKVPIPQC*RSSQRC Trigger: GCATCTCTGACTACTTCTTCAACACTGAGGTATTGG...CACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGATACGAGGTAGTTTATaGCATCCTCCAGGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPVSVMGAAAELPGPGSKIRGSL*HPPGTP Trigger: TGGAGTACCTGGAGGATGTCATAAACTACCTCGTAT...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCATACGAGGTAGTTTATaGCATCCTCCAGGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGNADAGGAALKEAQGPIRGSL*HPPGTP Trigger: TGGAGTACCTGGAGGATGTCATAAACTACCTCGTAT...GGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGATCCATCCACAGCCATaGTGTAGAATTCGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPVSVMGAAAELPGPGSKIHPQP*CRIRRN Trigger: GTTCCTACGAATTCTACAGCATGGCTGTGGATGGAT...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGCACAGGGCCCCGGTACACAGATCTCCTGCTTTCCCCTCAGCTTCAGCATGGGAGTCAGAGATGCCCATaGATACCATGTATGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPRYTDLLLSPQLQHGSQRCP*IPCMHR Trigger: ACGGTGCATACATGGTATGCATGGGCATCTCTGACT...CCCATGCTGAAGCTGAGGGGAAAGCAGGAGATCTGTGTACCGGGGCCCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | AGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTCCTTCTGGGAGATCATaGCCACGAAGCCAGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLNRIPGAGQPVSVMGAAPSGRS*PRSQGR Trigger: CCGACCCTGGCTTCGTGGCCATGATCTCCCAGAAGG...AGCTGCTCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTTCAACCACTCCCTGCTaGCACGCGAAGTCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TGQGQRLNRIPGAGQPVSSTTPC*HAKSRP Trigger: GGGTCTGGACTTCGCGTGCCAGCAGGGAGTGGTTGA...ACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGGGCCCCGGTACACAGATCTCCTGCTTTCCCCTCAGCTTCAGCATGGGGATAAGGCTGCAGTTTaGAGGACACAGAGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGPRYTDLLLSPQLQHGDKAAV*RTQSLS Trigger: TGAGAGACTCTGTGTCCTCCAAACTGCAGCCTTATC...CCCATGCTGAAGCTGAGGGGAAAGCAGGAGATCTGTGTACCGGGGCCCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCACATCATCCACTCTaGTTATCACAGAAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQPVSVMGAAAELPGPGSHHPL*LSQKGS Trigger: AGACCCTTTCTGTGATAACCAGAGTGGATGATGTGA...CCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGGGTGGTGATGTGGCCTaGGGAGTCACTACCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATGQGQRLNRIPGAGQPVGGDVA*GVTTQN Trigger: ATTCTGGGTAGTGACTCCTCAGGCCACATCACCACC...CACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGACTCATTACTGGCGGGTaGATGGGAAGTGGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRLNRIPGAGQPVSVMGLITGG*MGSGSR Trigger: CCGAGACCCACTTCCCATTCACCCGCCAGTAATGAG...TCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGGCCTGTAGCTCCTTCTaGAACTCAACCACTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATGQGQRLNRIPGAGQPVACSSF*NSTTPC Trigger: GCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGC...CACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGGCCTGTAGCTCCTTCTaGAACTCAACCACTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGQRLNRIPGAGQPVSVACSSF*NSTTPC Trigger: GCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGC...CACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | TGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACACAGATATCCATCCACAGCCATaGTGTAGAATTCGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CGCWRGCSERGTGPRYTDIHPQP*CRIRRN Trigger: GTTCCTACGAATTCTACAGCATGGCTGTGGATGGAT...ATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAGCAGCTGCACCCCCATaGTGGGGAACATCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGAAAPP*WGTSWP Trigger: TGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGC...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGATAATTCCAGCAACCACCTaGCAAGCTTCATCTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVMGAAAELPGPGSKVIIPATT*QASSLP Trigger: TGGGAGAGATGAAGCTTGGCAGGTGGTTGCTGGAAT...TATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGATGTCTCAATTTTCCTGTaGAACAGTCGGATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GECDGSSCRASWPRVQGDVSIFL*NSRISH Trigger: GTGGCTGATCCGACTGTTCCACAGGAAAATTGAGAC...ATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | CCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGTCACATCATCCACTCTaGTTATCACAGAAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSVMGAAAELPGPGSKVSHHPL*LSQKGS Trigger: AGACCCTTTCTGTGATAACCAGAGTGGATGATGTGA...CACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGTCACATCATCCACTCTaGTTATCACAGAAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPVSVMGAAAELPGPGSKSHHPL*LSQKGS Trigger: AGACCCTTTCTGTGATAACCAGAGTGGATGATGTGA...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGATGGAGCAGATGGTGGTaGTGTGGCCTGAGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGWSRWW*CGLRSH Trigger: GTGACTCCTCAGGCCACATCACCACCATCTGCTCCA...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCCTGTAGCTCCTTCTaGAACTCAACCACTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQRLNRIPGAGQPVSVMGACSSF*NSTTPC Trigger: GCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGC...TCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGATCAGGTCGGTGGAGATaGAGACGCCCTGGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGSGRWR*RRPGCS Trigger: TGAGCATCCAGGGCGTCTCCATCTCCACCGACCTGA...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCATGCTGGGGAACATCTTaGCCACCTTGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLNRIPGAGQPVSVMGACWGTS*PPWAGR Trigger: CCTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCA...TGCTCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGATGCTGGGGAACATCTTaGCCACCTTGGGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGCWGTS*PPWAGR Trigger: CCTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCA...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAGGTGGTGATGTGGCCTaGGGAGTCACTACCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGGGDVA*GVTTQN Trigger: ATTCTGGGTAGTGACTCCTCAGGCCACATCACCACC...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGATACGCAGCCTCTCATTaGTCTTGGGCAGCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQRLNRIPGAGQPVSVMGYAASH*SWAALV Trigger: CACTAGTGCTGCCCAAGATCAATGAGAGGCTGCGTA...TCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGTACGCAGCCTCTCATTaGTCTTGGGCAGCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEATGQGQRLNRIPGAGQYAASH*SWAALV Trigger: CACTAGTGCTGCCCAAGATCAATGAGAGGCTGCGTA...CTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTGTTCAGCTGGAATCTaGCATTATTTGATAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGQPVSVMGAAAELPGPGCSAGI*HYLITV Trigger: AACTGTTATCAAATAATGGCAGATTCCAGCTGAACA...CCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | CCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGAAGTCAGTGTTCAGCTaGAATCTGCCATTATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSVMGAAAELPGPGSKVKSVFS*NLPLFD Trigger: ATCAAATAATGGCAGATTCCAGCTGAACACTGACTT...CACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAATTCCAGCAACCACCTaGTGCCAAGCTTCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQRLNRIPGAGQPVSVMGIPATT*CQASSL Trigger: GAGAGATGAAGCTTGGCAGCAGGTGGTTGCTGGAAT...TCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAAATGGATGTTCTTGTAAAGCCCAAAGTAATGTCGCCCCTCCAGCGGAATCAGGTCGGTGGAGATaGAGACGCCCTGGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKNGCSCKAQSNVAPPAESGRWR*RRPGCS Trigger: TGAGCATCCAGGGCGTCTCCATCTCCACCGACCTGA...TTCCGCTGGAGGGGCGACATTACTTTGGGCTTTACAAGAACATCCATTTTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACCCCAGCATGCTGCCTaGGATTTTGATATGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGPQHAA*DFDMDT Trigger: AGTGTCCATATCAAAATCTCAGGCAGCATGCTGGGG...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCACATGCATACCATGTATaGACCGTTGGGCACAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLNRIPGAGQPVSVMGAHAYHV*TVGHKP Trigger: AGGTTTGTGCCCAACGGTGCATACATGGTATGCATG...TGCTCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAGAGGCACAGGGCCCCGGTACACAGATCTCCTGCTTTCCCCTCAGCTTTTTTCCTTCTTACCATaGCAAGAACAAAGAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SERGTGPRYTDLLLSPQLFSFLP*QEQREG Trigger: TCCCTCTCTTTGTTCTTGGCATGGTAAGAAGGAAAA...AAGCTGAGGGGAAAGCAGGAGATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065039.3 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAGTCTCAATTTTCCTGTaGAACAGTCGGATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGVSIFL*NSRISH Trigger: GTGGCTGATCCGACTGTTCCACAGGAAAATTGAGAC...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAGATAAGGCTGCAGTTTaGAGGACACAGAGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGDKAAV*RTQSLS Trigger: TGAGAGACTCTGTGTCCTCCAAACTGCAGCCTTATC...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAAATGGATGTTCTTGTAAAGCCCAAAGTAATGTCGCCCCTCCAGCGGAACCCCAGCATGCTGCCTaGGATTTTGATATGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GKNGCSCKAQSNVAPPAEPQHAA*DFDMDT Trigger: AGTGTCCATATCAAAATCTCAGGCAGCATGCTGGGG...TTCCGCTGGAGGGGCGACATTACTTTGGGCTTTACAAGAACATCCATTTTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACCAATACCTCAGTGTTaGAGAAGTAGTCAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGPIPQC*RSSQRC Trigger: GCATCTCTGACTACTTCTTCAACACTGAGGTATTGG...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAATACGAGGTAGTTTATaGCATCCTCCAGGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQEATGQGQRLNRIPGAGIRGSL*HPPGTP Trigger: TGGAGTACCTGGAGGATGTCATAAACTACCTCGTAT...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAAGAGGCACAGGGCCCCGGTACACAGATCTCCTGCTTTCCCCTCAGCTTAAGTCAGTGTTCAGCTaGAATCTGCCATTATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SERGTGPRYTDLLLSPQLKSVFS*NLPLFD Trigger: ATCAAATAATGGCAGATTCCAGCTGAACACTGACTT...AAGCTGAGGGGAAAGCAGGAGATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAAATGGATGTTCTTGTAAAGCCCAAAGTAATGTCGCCCCTCCAGCGGAAAGTCAGAGATGCCCATaGATACCATGTATGCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GKNGCSCKAQSNVAPPAESQRCP*IPCMHR Trigger: ACGGTGCATACATGGTATGCATGGGCATCTCTGACT...TTCCGCTGGAGGGGCGACATTACTTTGGGCTTTACAAGAACATCCATTTTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAAATGGATGTTCTTGTAAAGCCCAAAGTAATGTCGCCCCTCCAGCGGAAACATGCATACCATGTATaGACCGTTGGGCACAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GKMDVLVKPKVMSPLQRKHAYHV*TVGHKP Trigger: AGGTTTGTGCCCAACGGTGCATACATGGTATGCATG...TTTCCGCTGGAGGGGCGACATTACTTTGGGCTTTACAAGAACATCCATTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTTGTTCAGCTGGAATCTaGCATTATTTGATAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGQGQRLNRIPGAGQPVSCSAGI*HYLITV Trigger: AACTGTTATCAAATAATGGCAGATTCCAGCTGAACA...ACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCAAAGTCAGTGTTCAGCTaGAATCTGCCATTATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QRLNRIPGAGQPVSVMGAKSVFS*NLPLFD Trigger: ATCAAATAATGGCAGATTCCAGCTGAACACTGACTT...TGCTCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 90 bp | CCACTCCCTGCTGGCACGCGAAGTCCAGACCCTTCTGGGAGATCATaGCCACGAAGCCAGGGTCGGTGGCGGCTGTCAGGGCTGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLPAGTRSPDPSGRS*PRSQGRWRLSGLCQ Trigger: TTGGCACAGCCCTGACAGCCGCCACCGACCCTGGCTTCGTGGCCATGATCTCCCAGAAGGGTCTGGACTTCGCGTGCCAGCAGGGAGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS TCA 90 bp | GGCCTGAGGGCTGTATGCTCAGGTGCACAGGCACGGGCGCTGAGATaGGCAGCTGCACCCCCATGCTGGGGAACATCTTGGCCACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLRAVCSGAQARALR*AAAPPCWGTSWPPW Trigger: CCAAGGTGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGCTCATCTCAGCGCCCGTGCCTGTGCACCTGAGCATACAGCCCTCAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGGGAACTGGTTCGTGGTaGTCAGGGGAGCCAGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGQPVSVMGAAAELPGPGGTGSW*SGEPAD Trigger: GTCTGCTGGCTCCCCTGACAACCACGAACCAGTTCC...CCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS GCA 90 bp | GGCTGTATGCTCAGGTGCACAGGCACGGGCGCTGAGATGAGCAGCTaGACCCCCATGCTGGGGAACATCTTGGCCACCTTGGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCMLRCTGTGAEMSS*TPMLGNILATLGRK Trigger: CTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGCTCATCTCAGCGCCCGTGCCTGTGCACCTGAGCATACAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGATGCTGGGGAACATCTaGGCCACCTTGGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPVSVMGAAAELPGPGSKMLGNI*ATLGRK Trigger: CTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCAT...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | CAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGGTCTCCAGCTTAGGATaGAATGAGAGGCCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRKCGCWRGCSERGTGPRVSSLG*NERPEG Trigger: GCCCTCAGGCCTCTCATTCAATCCTAAGCTGGAGAC...CCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGATATGCTGGGGAACATCTaGGCCACCTTGGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GECDGSSCRASWPRVQGDMLGNI*ATLGRK Trigger: CTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCAT...ATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGGGGACCAGGGAGGCGTaGGGGAGGACCACAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEATGQGQRLNRIPGAGQGTREA*GRTTKA Trigger: GGCCTTTGTGGTCCTCCCCAACGCCTCCCTGGTCCC...CTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGAGCCTCTCATTGATCTaGGGCAGCACTAGTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AGQPVSVMGAAAELPGPGSLSLI*GSTSVD Trigger: ATCCACACTAGTGCTGCCCAAGATCAATGAGAGGCT...CCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTGTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGATGCTCAGTTCAAAATaGCCACCGGCCTTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPVSVMGAAAELPGPGSKMLSSK*PPALRK Trigger: CTTCCTCAAGGCCGGTGGCAATTTTGAACTGAGCAT...CTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCGGAAATGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCATGCTCAGTTCAAAATaGCCACCGGCCTTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGNADAGGAALKEAQGPMLSSK*PPALRK Trigger: CTTCCTCAAGGCCGGTGGCAATTTTGAACTGAGCAT...GGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCATTTCCGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAGGGACCAGGGAGGCGTaGGGGAGGACCACAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQEATGQGQRLNRIPGAGGTREA*GRTTKA Trigger: GGCCTTTGTGGTCCTCCCCAACGCCTCCCTGGTCCC...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTAGCCTCTCATTGATCTaGGGCAGCACTAGTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AGECDGSSCRASWPRVQGSLSLI*GSTSVD Trigger: ATCCACACTAGTGCTGCCCAAGATCAATGAGAGGCT...ACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | CCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGAGCCTCTCATTGATCTaGGGCAGCACTAGTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVSVMGAAAELPGPGSKVSLSLI*GSTSVD Trigger: ATCCACACTAGTGCTGCCCAAGATCAATGAGAGGCT...CACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS GCA 90 bp | GGAACACTGATAGCCTGTAGCTCCTTCTGCAACTCAACCACTCCCTaGTGGCACGCGAAGTCCAGACCCTTCTGGGAGATCATGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GTLIACSSFCNSTTP*WHAKSRPFWEIMAT Trigger: CGTGGCCATGATCTCCCAGAAGGGTCTGGACTTCGCGTGCCAGCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGCTATCAGTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGGGAACTGGTTCGTGGTaGTCAGGGGAGCCAGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQGQRLNRIPGAGQPVSVGTGSW*SGEPAD Trigger: GTCTGCTGGCTCCCCTGACAACCACGAACCAGTTCC...CACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 90 bp | ACACTGATAGCCTGTAGCTCCTTCTGCAACTCAACCACTCCCTGCTaGCACGCGAAGTCCAGACCCTTCTGGGAGATCATGGCCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLIACSSFCNSTTPC*HAKSRPFWEIMATK Trigger: CTTCGTGGCCATGATCTCCCAGAAGGGTCTGGACTTCGCGTGCCAGCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGCTATCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTGATACCCTTTCCCAGGTGCTaGATCTTAAAGACCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSVMGAAAELPGPGSKVIPFPRC*ILKTPE Trigger: CTCTGGGGTCTTTAAGATCAAGCACCTGGGAAAGGG...TATCACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS GCA 90 bp | AAGACCCCAGAGAAGTCAGGAACACTGATAGCCTGTAGCTCCTTCTaGAACTCAACCACTCCCTGCTGGCACGCGAAGTCCAGACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTPEKSGTLIACSSF*NSTTPCWHAKSRPF Trigger: GAAGGGTCTGGACTTCGCGTGCCAGCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGCTATCAGTGTTCCTGACTTCTCTGGGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGTGAGTGTGATGGGAGCAGCTGCAGAGCTTCCTGGCCCAGGGTCCAAGGTATGCTGCCTGAGATTTaGATATGGACACTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AGECDGSSCRASWPRVQGMLPEI*IWTLSM Trigger: CATTGACAGTGTCCATATCAAAATCTCAGGCAGCAT...ACCTTGGACCCTGGGCCAGGAAGCTCTGCAGCTGCTCCCATCACACTCACCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGGTCTCCAGCTTAGGATaGAATGAGAGGCCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQGQRLNRIPGAGQPVSVVSSLG*NERPEG Trigger: GCCCTCAGGCCTCTCATTCAATCCTAAGCTGGAGAC...CACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | TGCGGATGCTGGAGGGGCTGCTCTGAAAGAGGCACAGGGCCCCGGTACACAGATATGCTGCCTGAGATTTaGATATGGACACTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CGCWRGCSERGTGPRYTDMLPEI*IWTLSM Trigger: CATTGACAGTGTCCATATCAAAATCTCAGGCAGCAT...ATCTGTGTACCGGGGCCCTGTGCCTCTTTCAGAGCAGCCCCTCCAGCATCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGAATGCTGGGGAACATCTaGGCCACCTTGGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KQEATGQGQRLNRIPGAGMLGNI*ATLGRK Trigger: CTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCAT...TCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | AGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCAGCTCCCTTTCCCAGGTGCTaGATCTTAAAGACCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLNRIPGAGQPVSVMGAAPFPRC*ILKTPE Trigger: CTCTGGGGTCTTTAAGATCAAGCACCTGGGAAAGGG...AGCTGCTCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 90 bp | GGGGAGCCAGCAGACTGTAGTCAACCGAGGTCACATCATCCACTCTaGTTATCACAGAAAGGGTCTTCAGATAAGGCTGCAGTTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEPADCSQPRSHHPL*LSQKGSSDKAAVWR Trigger: CCTCCAAACTGCAGCCTTATCTGAAGACCCTTTCTGTGATAACCAGAGTGGATGATGTGACCTCGGTTGACTACAGTCTGCTGGCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGTGATGGGAGCAATGCTCAGTTCAAAATaGCCACCGGCCTTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QRLNRIPGAGQPVSVMGAMLSSK*PPALRK Trigger: CTTCCTCAAGGCCGGTGGCAATTTTGAACTGAGCAT...TGCTCCCATCACACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS GCA 90 bp | CTCAGTGTTGAAGAAGTAGTCAGAGATGCCCATGCATACCATGTATaGACCGTTGGGCACAAACCTCATTACTGGCGGGTGAATGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVEEVVRDAHAYHV*TVGHKPHYWRVNGK Trigger: CTTCCCATTCACCCGCCAGTAATGAGGTTTGTGCCCAACGGTGCATACATGGTATGCATGGGCATCTCTGACTACTTCTTCAACACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTGACATCCACTTTCCATaGATCTTGATGCTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TGQGQRLNRIPGAGQPVSDIHFP*ILMLAS Trigger: AGATGCCAGCATCAAGATCAATGGAAAGTGGATGTC...ACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGCTACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGGACATCCACTTTCCATaGATCTTGATGCTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QEATGQGQRLNRIPGAGQDIHFP*ILMLAS Trigger: AGATGCCAGCATCAAGATCAATGGAAAGTGGATGTC...CTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGTAGCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAAATGGATGTTCTTGTAAAGCCCAAAGTAATGTCGCCCCTCCAGCGGAAACCCTTTCCCAGGTGCTaGATCTTAAAGACCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKMDVLVKPKVMSPLQRKPFPRC*ILKTPE Trigger: CTCTGGGGTCTTTAAGATCAAGCACCTGGGAAAGGG...TTTCCGCTGGAGGGGCGACATTACTTTGGGCTTTACAAGAACATCCATTTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109500.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGTCAGGGCCAAAGACTAAATAGGATTCCTGGAGCAGGACAGCCGGTGAGTATGCTGCCTGAGATTTaGATATGGACACTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TGQGQRLNRIPGAGQPVSMLPEI*IWTLSM Trigger: CATTGACAGTGTCCATATCAAAATCTCAGGCAGCAT...ACTCACCGGCTGTCCTGCTCCAGGAATCCTATTTAGTCTTTGGCCCTGACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 90 bp | CCACTCTGGTTATCACAGAAAGGGTCTTCAGATAAGGCTGCAGTTTaGAGGACACAGAGTCTCTCACGATCTTGCAGATCTTTTTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLWLSQKGSSDKAAV*RTQSLSRSCRSFCK Trigger: TTTACAAAAAGATCTGCAAGATCGTGAGAGACTCTGTGTCCTCCAAACTGCAGCCTTATCTGAAGACCCTTTCTGTGATAACCAGAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 72 bp | GCTGGCACGCGAAGTCCAGACCCTTCTGGGAGATCATaGCCACGAAGCCAGGGTCGGTGGCGGCTGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGTRSPDPSGRS*PRSQGRWRLSG Trigger: CCCTGACAGCCGCCACCGACCCTGGCTTCGTGGCCATGATCTCCCAGAAGGGTCTGGACTTCGCGTGCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 72 bp | ACCACTCCCTGCTGGCACGCGAAGTCCAGACCCTTCTaGGAGATCATGGCCACGAAGCCAGGGTCGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TTPCWHAKSRPF*EIMATKPGSVA Trigger: CGCCACCGACCCTGGCTTCGTGGCCATGATCTCCCAGAAGGGTCTGGACTTCGCGTGCCAGCAGGGAGTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS TCA 72 bp | AGCCAGGGTCGGTGGCGGCTGTCAGGGCTGTGCCAATaGTGGCCAGCAGCAACAGGGCTGACCATTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SQGRWRLSGLCQ*WPAATGLTISA Trigger: TGCGGAAATGGTCAGCCCTGTTGCTGCTGGCCATCATTGGCACAGCCCTGACAGCCGCCACCGACCCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS TCA 72 bp | CAGGGCTGTGCCAATGATGGCCAGCAGCAACAGGGCTaGCCATTTCCGCACGTTGTCAGGGGCCCAGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QGCANDGQQQQG*PFPHVVRGPGH Trigger: ATGACCTGGGCCCCTGACAACGTGCGGAAATGGTCAGCCCTGTTGCTGCTGGCCATCATTGGCACAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 90 bp | ACGGGCGCTGAGATGAGCAGCTGCACCCCCATGCTGGGGAACATCTaGGCCACCTTGGGCAGGAAGGTCCTAAGGAAGTCAGTGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGAEMSSCTPMLGNI*ATLGRKVLRKSVFS Trigger: GCTGAACACTGACTTCCTTAGGACCTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGCTCATCTCAGCGCCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 72 bp | AGCTGCACCCCCATGCTGGGGAACATCTTGGCCACCTaGGGCAGGAAGGTCCTAAGGAAGTCAGTGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCTPMLGNILAT*GRKVLRKSVFS Trigger: GCTGAACACTGACTTCCTTAGGACCTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 72 bp | GAGATGAGCAGCTGCACCCCCATGCTGGGGAACATCTaGGCCACCTTGGGCAGGAAGGTCCTAAGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EMSSCTPMLGNI*ATLGRKVLRKS Trigger: TGACTTCCTTAGGACCTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGCTCATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 90 bp | GAGATGAGCAGCTGCACCCCCATGCTGGGGAACATCTTGGCCACCTaGGGCAGGAAGGTCCTAAGGAAGTCAGTGTTCAGCTGGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: EMSSCTPMLGNILAT*GRKVLRKSVFSWNL Trigger: CAGATTCCAGCTGAACACTGACTTCCTTAGGACCTTCCTGCCCAAGGTGGCCAAGATGTTCCCCAGCATGGGGGTGCAGCTGCTCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS GCA 72 bp | ATAGCCTGTAGCTCCTTCTGCAACTCAACCACTCCCTaGTGGCACGCGAAGTCCAGACCCTTCTGGGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: IACSSFCNSTTP*WHAKSRPFWEI Trigger: GATCTCCCAGAAGGGTCTGGACTTCGCGTGCCAGCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS GCA 72 bp | GAGAAGTCAGGAACACTGATAGCCTGTAGCTCCTTCTaGAACTCAACCACTCCCTGCTGGCACGCGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EKSGTLIACSSF*NSTTPCWHAKS Trigger: GGACTTCGCGTGCCAGCAGGGAGTGGTTGAGTTGCAGAAGGAGCTACAGGCTATCAGTGTTCCTGACTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 72 bp | TGTGGCCTGAGGAGTCACTACCCAGAATCAGGTCGGTaGAGATGGAGACGCCCTGGATGCTCAGTTCAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: CGLRSHYPESGR*RWRRPGCSVQN Trigger: ATTTTGAACTGAGCATCCAGGGCGTCTCCATCTCCACCGACCTGATTCTGGGTAGTGACTCCTCAGGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 90 bp | TTCCTTCTTACCATGCCAAGAACAAAGAGAGGGACCAGGGAGGCGTaGGGGAGGACCACAAAGGCCTGGGTCTCCAGCTTAGGATTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FLLTMPRTKRGTREA*GRTTKAWVSSLGLN Trigger: ATTCAATCCTAAGCTGGAGACCCAGGCCTTTGTGGTCCTCCCCAACGCCTCCCTGGTCCCTCTCTTTGTTCTTGGCATGGTAAGAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065039.3 |
||
| CDS TCA 72 bp | TGTCAATGTGACTGTCGCAGTTGGAGCAGATGGTGGTaGTGTGGCCTGAGGAGTCACTACCCAGAATCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CQCDCRSWSRWW*CGLRSHYPESG Trigger: ACCTGATTCTGGGTAGTGACTCCTCAGGCCACATCACCACCATCTGCTCCAACTGCGACAGTCACATTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS TCA 72 bp | GTCGGATCAGCCACCCCAGCATGCTGCCTGAGATTTTaGTATGGACACTGTCAATGTGACTGTCGCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VGSATPACCLRF*YGHCQCDCRSW Trigger: CCAACTGCGACAGTCACATTGACAGTGTCCATATCAAAATCTCAGGCAGCATGCTGGGGTGGCTGATCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 72 bp | GTGGAGATGGAGACGCCCTGGATGCTCAGTTCAAAATaGCCACCGGCCTTGAGGAAGTTCTTCCTTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: VEMETPWMLSSK*PPALRKFFLDI Trigger: GATGTCAAGGAAGAACTTCCTCAAGGCCGGTGGCAATTTTGAACTGAGCATCCAGGGCGTCTCCATCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 90 bp | ATCAGGTCGGTGGAGATGGAGACGCCCTGGATGCTCAGTTCAAAATaGCCACCGGCCTTGAGGAAGTTCTTCCTTGACATCCACTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IRSVEMETPWMLSSK*PPALRKFFLDIHFP Trigger: TGGAAAGTGGATGTCAAGGAAGAACTTCCTCAAGGCCGGTGGCAATTTTGAACTGAGCATCCAGGGCGTCTCCATCTCCACCGACCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 90 bp | GCATTTGTTTTCATGCCAAGAACAAAGAGAGGGACCAGGGAGGCGTaGGGGAGGACCACAAAGGCCTGGGTCTCCAGCTTAGGATTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: AFVFMPRTKRGTREA*GRTTKAWVSSLGLN Trigger: ATTCAATCCTAAGCTGGAGACCCAGGCCTTTGTGGTCCTCCCCAACGCCTCCCTGGTCCCTCTCTTTGTTCTTGGCATGAAAACAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 90 bp | CCGGCCTTGAGGAAGTTCTTCCTTGACATCCACTTTCCATTGATCTaGATGCTGGCATCTTTGATGAACACTCGGAGGCCATCACTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PALRKFFLDIHFPLI*MLASLMNTRRPSLG Trigger: GCCCAGTGATGGCCTCCGAGTGTTCATCAAAGATGCCAGCATCAAGATCAATGGAAAGTGGATGTCAAGGAAGAACTTCCTCAAGGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS GCA 72 bp | GGCCAAATTTGGATTCCTTCAATTCCAGCAACCACCTaGCAAGCTTCATCTCTCCCACGAGCCTGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQIWIPSIPATT*QASSLPRACSP Trigger: AGGAGAACAGGCTCGTGGGAGAGATGAAGCTTGGCAGGTGGTTGCTGGAATTGAAGGAATCCAAATTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109500.8 |
||
| CDS GCA 72 bp | CAAATTTGGATTCCTTCAATTCCAGCAACCACCTGCTaGCAAGCTTCATCTCTCCCACGAGCCTGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QIWIPSIPATTC*QASSLPRACSP Trigger: AGGAGAACAGGCTCGTGGGAGAGATGAAGCTTGGCAGCAGGTGGTTGCTGGAATTGAAGGAATCCAAATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 |
||
| CDS CAA 72 bp | GACATCCACTTTCCATTGATCTTGATGCTGGCATCTTaGATGAACACTCGGAGGCCATCACTGGGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: DIHFPLILMLAS*MNTRRPSLGSI Trigger: GATGCTGCCCAGTGATGGCCTCCGAGTGTTCATCAAAGATGCCAGCATCAAGATCAATGGAAAGTGGATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 72 bp | ACGCCCTGGATGCTCAGTTCAAAATTGCCACCGGCCTaGAGGAAGTTCTTCCTTGACATCCACTTTCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: TPWMLSSKLPPA*RKFFLDIHFPL Trigger: CAATGGAAAGTGGATGTCAAGGAAGAACTTCCTCAAGGCCGGTGGCAATTTTGAACTGAGCATCCAGGGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 90 bp | GAGATGGAGACGCCCTGGATGCTCAGTTCAAAATTGCCACCGGCCTaGAGGAAGTTCTTCCTTGACATCCACTTTCCATTGATCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: EMETPWMLSSKLPPA*RKFFLDIHFPLILM Trigger: CATCAAGATCAATGGAAAGTGGATGTCAAGGAAGAACTTCCTCAAGGCCGGTGGCAATTTTGAACTGAGCATCCAGGGCGTCTCCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 72 bp | GCAGACTGTAGTCAACCGAGGTCACATCATCCACTCTaGTTATCACAGAAAGGGTCTTCAGATAAGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ADCSQPRSHHPL*LSQKGSSDKAA Trigger: TGCAGCCTTATCTGAAGACCCTTTCTGTGATAACCAGAGTGGATGATGTGACCTCGGTTGACTACAGTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS TCA 72 bp | AGGTTCCAGACTGTTGGTAAGCCAATACCTCAGTGTTaGAGAAGTAGTCAGAGATGCCCATGCATACCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RFQTVGKPIPQC*RSSQRCPCIPC Trigger: ACATGGTATGCATGGGCATCTCTGACTACTTCTTCAACACTGAGGTATTGGCTTACCAACAGTCTGGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CCA 72 bp | TTATCACAGAAAGGGTCTTCAGATAAGGCTGCAGTTTaGAGGACACAGAGTCTCTCACGATCTTGCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: LSQKGSSDKAAV*RTQSLSRSCRS Trigger: AGATCTGCAAGATCGTGAGAGACTCTGTGTCCTCCAAACTGCAGCCTTATCTGAAGACCCTTTCTGTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 72 bp | GCCTTGAGGAAGTTCTTCCTTGACATCCACTTTCCATaGATCTTGATGCTGGCATCTTTGATGAACACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRKFFLDIHFP*ILMLASLMNTR Trigger: CCGAGTGTTCATCAAAGATGCCAGCATCAAGATCAATGGAAAGTGGATGTCAAGGAAGAACTTCCTCAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065039.3 ENSMUST00000109499.8 ENSMUST00000109500.8 |
||
| CDS CAA 72 bp | GCCTGTTCTCCTCAGCATCCACTTCCAAAGAGGCATTaGTTTTCCTTCTTACCATGCCAAGAACAAAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ACSPQHPLPKRH*FSFLPCQEQRE Trigger: CTCTCTTTGTTCTTGGCATGGTAAGAAGGAAAACAAATGCCTCTTTGGAAGTGGATGCTGAGGAGAACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065039.3 |
||