Pregenerated sensors for BPGM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038871Ensembl transcript IDs: ENSMUST00000045372.6, ENSMUST00000138668.2, ENSMUST00000139067.2, ENSMUST00000149131.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGATATACAGCAGACGCTCTCACAGGCTGTCAGCCTGCTCAGGTaGATAAAATCACACGCACCACGGTCAACTTCCCCCAGCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: ADIQQTLSQAVSLLR*IKSHAPRSTSPSQP Trigger: AGGCTGGCTGGGGGAAGTTGACCGTGGTGCGTGTGATTTTATTCACCTGAGCAGGCTGACAGCCTGTGAGAGCGTCTGCTGTATATCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR TCA 90 bp | CAGGGAGGCAACAGCCTAAAGAAACGGCAGCTGTCACACAGCACCTaGACACACTTCACTTCTGCTCACAGCCCACCTAAACTAGGATGT | + |
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Preference number: 1 (lower is better) Translates to: QGGNSLKKRQLSHST*THFTSAHSPPKLGC Trigger: ACATCCTAGTTTAGGTGGGCTGTGAGCAGAAGTGAAGTGTGTTCAGGTGCTGTGTGACAGCTGCCGTTTCTTTAGGCTGTTGCCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR GCA 90 bp | TGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTTaGTTTCAGGGAGGCAACAGCCTAAAGAAACGGCAGCTGTCACAC | + |
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Preference number: 1 (lower is better) Translates to: CLQNVCMTVTGISRT*FQGGNSLKKRQLSH Trigger: GTGTGACAGCTGCCGTTTCTTTAGGCTGTTGCCTCCCTGAAAGCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CCA 90 bp | TCTATCGTAAGTACTATGTCTGCAAAATGTGTGCATGACTGTCACTaGAATATCGAGGACTTGCTTTCAGGGAGGCAACAGCCTAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SIVSTMSAKCVHDCH*NIEDLLSGRQQPKE Trigger: TTCTTTAGGCTGTTGCCTCCCTGAAAGCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTACTTACGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CAA 90 bp | CACCACGGTCAACTTCCCCCAGCCAGCCTTCACTTCAGGGGTGGGTaGTGCTCAACTAATGTAACCTTAGGAGTGCTACAGGAGACGGCG | + |
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Preference number: 2 (lower is better) Translates to: HHGQLPPASLHFRGG*CSTNVTLGVLQETA Trigger: CGCCGTCTCCTGTAGCACTCCTAAGGTTACATTAGTTGAGCACAACCCACCCCTGAAGTGAAGGCTGGCTGGGGGAAGTTGACCGTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR-3UTR TCA 90 bp | ATCGAGGACTTGCTTTCAGGGAGGCAACAGCCTAAAGAAACGGCAGCTGTCACAAGCACCTGTCAGTGGTaGCTCTGCAATGACTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: IEDLLSGRQQPKETAAVTSTCQW*LCNDLL Trigger: TAACAAGTCATTGCAGAGTCACCACTGACAGGTGCT...TGTGACAGCTGCCGTTTCTTTAGGCTGTTGCCTCCCTGAAAGCAAGTCCTCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CAA 90 bp | ATGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTaGCTTTCAGGGAGGCAACAGCCTAAAGAAACGGCAGCTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: MSAKCVHDCHWNIED*LSGRQQPKETAAVT Trigger: TGTGACAGCTGCCGTTTCTTTAGGCTGTTGCCTCCCTGAAAGCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGACTGTAATCTTTTGTACCTAGCCGAGGAACAGCAGATATACAGCAGACGCCTTGCGCGTGTTGTATaGAGTCACAAAGCTTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: VDCNLLYLAEEQQIYSRRLARVV*SHKALF Trigger: AAATAAAGCTTTGTGACTGCATACAACACGCGCAAG...GCGTCTGCTGTATATCTGCTGTTCCTCGGCTAGGTACAAAAGATTACAGTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR-3UTR GCA 90 bp | AGTACTATGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTTGTTCAGGGGTGGGTTGTaGTCAACTAATGTAACCTTA | + |
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Preference number: 2 (lower is better) Translates to: STMSAKCVHDCHWNIEDLFRGGL*STNVTL Trigger: TAAGGTTACATTAGTTGAGCACAACCCACCCCTGAA...CAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR GCA 72 bp | ACAGGATGGCACTGGGCTAGACATCAAAGGGCCTTGTaGTACTGTGGCGCTCAGATGCCTTCCCTCGGACCC | + |
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Preference number: 3 (lower is better) Translates to: TGWHWARHQRAL*YCGAQMPSLGP Trigger: GGGTCCGAGGGAAGGCATCTGAGCGCCACAGTAGCACAAGGCCCTTTGATGTCTAGCCCAGTGCCATCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR TCA 72 bp | CAGCAGACGCTCTCACAGGCTGTCAGCCTGCTCAGGTaGATAAAATCACACGCACCACGGTCAACTTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QQTLSQAVSLLR*IKSHAPRSTSP Trigger: GGGGGAAGTTGACCGTGGTGCGTGTGATTTTATTCACCTGAGCAGGCTGACAGCCTGTGAGAGCGTCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR TCA 72 bp | AACAGCCTAAAGAAACGGCAGCTGTCACACAGCACCTaGACACACTTCACTTCTGCTCACAGCCCACCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NSLKKRQLSHST*THFTSAHSPPK Trigger: TTTAGGTGGGCTGTGAGCAGAAGTGAAGTGTGTTCAGGTGCTGTGTGACAGCTGCCGTTTCTTTAGGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR GCA 72 bp | AATGTGTGCATGACTGTCACTGGAATATCGAGGACTTaGTTTCAGGGAGGCAACAGCCTAAAGAAACGGCAG | + |
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Preference number: 3 (lower is better) Translates to: NVCMTVTGISRT*FQGGNSLKKRQ Trigger: CTGCCGTTTCTTTAGGCTGTTGCCTCCCTGAAAGCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CCA 72 bp | AGTACTATGTCTGCAAAATGTGTGCATGACTGTCACTaGAATATCGAGGACTTGCTTTCAGGGAGGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: STMSAKCVHDCH*NIEDLLSGRQQ Trigger: CTGTTGCCTCCCTGAAAGCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CCA 72 bp | TTCAGACAAAGCTCTTCAGCATTCGAAGGTCACGTCTaGGCCACGATAAATTACCTAGTTACCTACACAAAC | + |
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Preference number: 3 (lower is better) Translates to: FRQSSSAFEGHV*ATINYLVTYTN Trigger: GTTTGTGTAGGTAACTAGGTAATTTATCGTGGCCCAGACGTGACCTTCGAATGCTGAAGAGCTTTGTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR GCA 90 bp | CTTCCCCCAGCCAGCCTTCACTTCAGGGGTGGGTTGTGCTCAACTAATGTAACCACAGGCACCCACTCCTaGCCCAGCTCTTCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: LPPASLHFRGGLCSTNVTTGTHS*PSSSRI Trigger: GATCCTGGAAGAGCTGGGGCAGGAGTGGGTGCCTGT...GGTTACATTAGTTGAGCACAACCCACCCCTGAAGTGAAGGCTGGCTGGGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | GGTCAACTTCCCCCAGCCAGCCTTCACTTCAGGGGTGGGTTGTGCTCAACTAATTCTGAACGTGGCAGTTaGTCCAAGGGCACATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQLPPASLHFRGGLCSTNSERGS*SKGTSH Trigger: GTGCGATGTGCCCTTGGATCAACTGCCACGTTCAGA...ATTAGTTGAGCACAACCCACCCCTGAAGTGAAGGCTGGCTGGGGGAAGTTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR CCA 90 bp | CTTCCCCCAGCCAGCCTTCACTTCAGGGGTGGGTTGTGCTCAACTAATGTAACCTTCTTAATGGCTGCCTaGATGGCCTCCTGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPASLHFRGGLCSTNVTFLMAA*MASWLP Trigger: GGGCAACCAGGAGGCCATCCAGGCAGCCATTAAGAA...GGTTACATTAGTTGAGCACAACCCACCCCTGAAGTGAAGGCTGGCTGGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CAA 72 bp | CACTGTGCATACCCTGGTCCTTCTAACTGGCTGAAGTaGGTTTCTACTGACGGCAGACAGGATGGCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: HCAYPGPSNWLK*VSTDGRQDGTG Trigger: CCCAGTGCCATCCTGTCTGCCGTCAGTAGAAACCAACTTCAGCCAGTTAGAAGGACCAGGGTATGCACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CAA 72 bp | CAACTTCCCCCAGCCAGCCTTCACTTCAGGGGTGGGTaGTGCTCAACTAATGTAACCTTAGGAGTGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: QLPPASLHFRGG*CSTNVTLGVLQ Trigger: CTGTAGCACTCCTAAGGTTACATTAGTTGAGCACAACCCACCCCTGAAGTGAAGGCTGGCTGGGGGAAGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | CTTCCCCCAGCCAGCCTTCACTTCAGGGGTGGGTTGTGCTCAACTAATGTAACCATCCTTCAAGCTTTCTaGACGTGGCAGTTGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPPASLHFRGGLCSTNVTILQAF*TWQLIQ Trigger: TTGGATCAACTGCCACGTTCAGAAAGCTTGAAGGAT...GGTTACATTAGTTGAGCACAACCCACCCCTGAAGTGAAGGCTGGCTGGGGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | TTAATTCAAACGGGAGGAGCAGAAAAGTTCATTCAGGCTTCAGACAAAGCTCTTTTGCCCAGGAACTGGTaGGGCCCAACGGCACGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LIQTGGAEKFIQASDKALLPRNW*GPTARR Trigger: CCTGCGTGCCGTTGGGCCTCACCAGTTCCTGGGCAA...AAGAGCTTTGTCTGAAGCCTGAATGAACTTTTCTGCTCCTCCCGTTTGAATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR GCA 90 bp | TTAATTCAAACGGGAGGAGCAGAAAAGTTCATTCAGGCTTCAGACAAAGCTCTTGGATGGCCTCCTGGTTaGCCAGGAACTGGTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LIQTGGAEKFIQASDKALGWPPG*PGTGEA Trigger: GGCCTCACCAGTTCCTGGGCAACCAGGAGGCCATCC...AAGAGCTTTGTCTGAAGCCTGAATGAACTTTTCTGCTCCTCCCGTTTGAATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | GGTCAACTTCCCCCAGCCAGCCTTCACTTCAGGGGTGGGTTGTGCTCAACTAATGATAATATCCTCGTCTaGGATACCTTCCAGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: GQLPPASLHFRGGLCSTNDNILV*DTFQMF Trigger: AAACATCTGGAAGGTATCTCAGACGAGGATATTATC...ATTAGTTGAGCACAACCCACCCCTGAAGTGAAGGCTGGCTGGGGGAAGTTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR GCA 90 bp | GTACTATGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTTGCTTGAGAGCTTTGAGCTaGCTCCCACAGTTCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLCLQNVCMTVTGISRTCLRALS*LPQFRA Trigger: GGCTCGGAACTGTGGGAGGCAGCTCAAAGCTCTCAA...GCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR CCA 90 bp | AACAGCAGATATACAGCAGACGCTCTCACAGGCTGTCAGCCTGCTCAGGTGAATTTCTCCTTATTCCATTaGCCCTCTCCATGTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: NSRYTADALTGCQPAQVNFSLFH*PSPCLS Trigger: ACTAAGACATGGAGAGGGCCAATGGAATAAGGAGAA...ATTCACCTGAGCAGGCTGACAGCCTGTGAGAGCGTCTGCTGTATATCTGCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | GTACTATGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTTGCCCATTTTCTCCCTGTTaGGGCCAATCAAGGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: VLCLQNVCMTVTGISRTCPFSPC*GQSRLH Trigger: ATGGAGCCTTGATTGGCCTCAACAGGGAGAAAATGG...GCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR GCA 90 bp | TGGGCCACGATAAATTACCTAGTTACCTACACAAACTCTACCACACAGCCTAGACACTTTCTTAATGGCTaGCTGGATGGCCTCCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: WATINYLVTYTNSTTQPRHFLNG*LDGLLV Trigger: AACCAGGAGGCCATCCAGGCAGCCATTAAGAAAGTG...TCTAGGCTGTGTGGTAGAGTTTGTGTAGGTAACTAGGTAATTTATCGTGGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR CCA 90 bp | GTACTATGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTTGCCTCCTCTATAGGAGGTaGGGTCACGTTGTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VLCLQNVCMTVTGISRTCLLYRR*GHVVAS Trigger: AGAAGCTACAACGTGACCCCACCTCCTATAGAGGAG...GCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| 3UTR CAA 72 bp | AAATGTGTGCATGACTGTCACTGGAATATCGAGGACTaGCTTTCAGGGAGGCAACAGCCTAAAGAAACGGCA | + |
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Preference number: 4 (lower is better) Translates to: KCVHDCHWNIED*LSGRQQPKETA Trigger: TGCCGTTTCTTTAGGCTGTTGCCTCCCTGAAAGCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR GCA 90 bp | TTCAGGCTTCAGACAAAGCTCTTCAGCATTCGAAGGTCACGTCTGGGCCACGATATATCAGAATGCTTTTaGCCTTTAAGATTTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: FRLQTKLFSIRRSRLGHDISECF*PLRFPE Trigger: CTCCGGAAATCTTAAAGGGCAAAAGCATTCTGATAT...ATCGTGGCCCAGACGTGACCTTCGAATGCTGAAGAGCTTTGTCTGAAGCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | TTAATTCAAACGGGAGGAGCAGAAAAGTTCATTCAGGCTTCAGACAAAGCTCTTATCAGCCAGGCTGTGTaGATGGACCTGTTAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LIQTGGAEKFIQASDKALISQAV*MDLLRM Trigger: CATCCTTAACAGGTCCATTCACACAGCCTGGCTGAT...AAGAGCTTTGTCTGAAGCCTGAATGAACTTTTCTGCTCCTCCCGTTTGAATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | ATCTCCACTTGTTACTCTCCTGTCTCCAAAACACAAAACCACCCTGGTCAAATCACCTGCTCTTCACCATaGTTCAAAGCCATTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ISTCYSPVSKTQNHPGQITCSSP*FKAIFS Trigger: GGAGAAAATGGCTTTGAATCATGGTGAAGAGCAGGT...GATTTGACCAGGGTGGTTTTGTGTTTTGGAGACAGGAGAGTAACAAGTGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR TCA 90 bp | GTACTATGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTTGCCTACTGCTATTCCCGTaGGCAGATATCAGAATGCTT | + |
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Preference number: 4 (lower is better) Translates to: VLCLQNVCMTVTGISRTCLLLFP*ADIRML Trigger: AAGCATTCTGATATCTGCTCACGGGAATAGCAGTAG...GCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR GCA 90 bp | TTAAAAATGAAACAGAAGGATATAAACTGCTACCACTGTGCATACCCTGGTCCTGAGCAGATATCAGAATaGTTTTGCCCTTTAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: LKMKQKDINCYHCAYPGPEQISE*FCPLRF Trigger: AAATCTTAAAGGGCAAAAGCATTCTGATATCTGCTC...AGGACCAGGGTATGCACAGTGGTAGCAGTTTATATCCTTCTGTTTCATTTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS CCA 90 bp | CTCCCACAGTTCCGAGCCTCCTCCAGTCCGTCGTTGTTAAGTTTCTaGTCCACCCAACTACAGAATCGGTTCTCCTTATTCCATTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LPQFRASSSPSLLSF*STQLQNRFSLFHWP Trigger: GGGCCAATGGAATAAGGAGAACCGATTCTGTAGTTGGGTGGACCAGAAACTTAACAACGACGGACTGGAGGAGGCTCGGAACTGTGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS CCA 90 bp | ACTGTAGATCTCGTGGAAGTAGGGATGAGACTCCTCTATAGGAGGTaGGGTCACGTTGTAGCTTCTCCTCCAGAGCCTTACCTGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TVDLVEVGMRLLYRR*GHVVASPPEPYLLF Trigger: GAAGAGCAGGTAAGGCTCTGGAGGAGAAGCTACAACGTGACCCCACCTCCTATAGAGGAGTCTCATCCCTACTTCCACGAGATCTACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045372.6 ENSMUST00000149131.2 |
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| CDS TCA 90 bp | GCCTTACCTGCTCTTCACCATGATTCAAAGCCATTTTCTCCCTGTTaGGGCCAATCAAGGCTCCATAGTGACGCTCATTCAGACGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: ALPALHHDSKPFSPC*GQSRLHSDAHSDAR Trigger: CCTGGCGTCTGAATGAGCGTCACTATGGAGCCTTGATTGGCCTCAACAGGGAGAAAATGGCTTTGAATCATGGTGAAGAGCAGGTAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045372.6 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS GCA 90 bp | ATGGATGTGAAGACAAGATCAAACTCGAAGTTGAGAGCTTTGAGCTaGCTCCCACAGTTCCGAGCCTCCTCCAGTCCGTCGTTGTTAAGT | + |
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Preference number: 5 (lower is better) Translates to: MDVKTRSNSKLRALS*LPQFRASSSPSLLS Trigger: ACTTAACAACGACGGACTGGAGGAGGCTCGGAACTGTGGGAGGCAGCTCAAAGCTCTCAACTTCGAGTTTGATCTTGTCTTCACATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGCTTCAGACAAAGCTCTTCAGCATTCGAAGGTCACGTCTGGGCCACGATAGATCAAACTCGAAGTaGAGAGCTTTGAGCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: FRLQTKLFSIRRSRLGHDRSNSK*RALSCL Trigger: GAGGCAGCTCAAAGCTCTCAACTTCGAGTTTGATCT...ATCGTGGCCCAGACGTGACCTTCGAATGCTGAAGAGCTTTGTCTGAAGCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS TCA 90 bp | CTTCCAGTAGGGAAGAAGTCTCTCCAGAACATCCTTCAAGCTTTCTaGACGTGGCAGTTGATCCAAGGGCACATCGCACACTTTGTACCT | + |
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Preference number: 5 (lower is better) Translates to: LPVGKKSLQNILQAF*TWQLIQGHIAHFVP Trigger: AGGTACAAAGTGTGCGATGTGCCCTTGGATCAACTGCCACGTTCAGAAAGCTTGAAGGATGTTCTGGAGAGACTTCTTCCCTACTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR CAA 90 bp | GTACTATGTCTGCAAAATGTGTGCATGACTGTCACTGGAATATCGAGGACTTGCGCCATTTTCTCCCTGTaGAGGCCAATCAAGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VLCLQNVCMTVTGISRTCAIFSL*RPIKAP Trigger: TGGAGCCTTGATTGGCCTCAACAGGGAGAAAATGGC...GCAAGTCCTCGATATTCCAGTGACAGTCATGCACACATTTTGCAGACATAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS GCA 90 bp | GGAGAGCTCTACTGCTATTCCCGTGAGCAGATATCAGAATGCTTTTaGCCTTTAAGATTTCCGGAGCAATCCTTTCCTTCCAGTAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: GELYCYSREQISECF*PLRFPEQSFPSSRE Trigger: TTCCCTACTGGAAGGAAAGGATTGCTCCGGAAATCTTAAAGGGCAAAAGCATTCTGATATCTGCTCACGGGAATAGCAGTAGAGCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS GCA 90 bp | GTTTCAGGAGAGCTCTACTGCTATTCCCGTGAGCAGATATCAGAATaGTTTTGCCCTTTAAGATTTCCGGAGCAATCCTTTCCTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: VSGELYCYSREQISE*FCPLRFPEQSFPSS Trigger: ACTGGAAGGAAAGGATTGCTCCGGAAATCTTAAAGGGCAAAAGCATTCTGATATCTGCTCACGGGAATAGCAGTAGAGCTCTCCTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS-3UTR CAA 90 bp | GTGGACTGTAATCTTTTGTACCTAGCCGAGGAACAGCAGATATACAGCAGACGCGATATCAGAATGCTTTaGCCCTTTAAGATTTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: VDCNLLYLAEEQQIYSRRDIRML*PFKISG Trigger: TCCGGAAATCTTAAAGGGCAAAAGCATTCTGATATC...GCGTCTGCTGTATATCTGCTGTTCCTCGGCTAGGTACAAAAGATTACAGTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS CAA 72 bp | TGCCTCCCACAGTTCCGAGCCTCCTCCAGTCCGTCGTaGTTAAGTTTCTGGTCCACCCAACTACAGAATCGG | + |
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Preference number: 6 (lower is better) Translates to: CLPQFRASSSPS*LSFWSTQLQNR Trigger: CCGATTCTGTAGTTGGGTGGACCAGAAACTTAACAACGACGGACTGGAGGAGGCTCGGAACTGTGGGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS CCA 72 bp | CTCGTGGAAGTAGGGATGAGACTCCTCTATAGGAGGTaGGGTCACGTTGTAGCTTCTCCTCCAGAGCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: LVEVGMRLLYRR*GHVVASPPEPY Trigger: GTAAGGCTCTGGAGGAGAAGCTACAACGTGACCCCACCTCCTATAGAGGAGTCTCATCCCTACTTCCACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045372.6 ENSMUST00000149131.2 |
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| CDS CAA 90 bp | GCTTTGAGCTGCCTCCCACAGTTCCGAGCCTCCTCCAGTCCGTCGTaGTTAAGTTTCTGGTCCACCCAACTACAGAATCGGTTCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: ALSCLPQFRASSSPS*LSFWSTQLQNRFSL Trigger: TAAGGAGAACCGATTCTGTAGTTGGGTGGACCAGAAACTTAACAACGACGGACTGGAGGAGGCTCGGAACTGTGGGAGGCAGCTCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS CAA 90 bp | TTAAGGATGGATGTGAAGACAAGATCAAACTCGAAGTTGAGAGCTTaGAGCTGCCTCCCACAGTTCCGAGCCTCCTCCAGTCCGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: LRMDVKTRSNSKLRA*SCLPQFRASSSPSL Trigger: CAACGACGGACTGGAGGAGGCTCGGAACTGTGGGAGGCAGCTCAAAGCTCTCAACTTCGAGTTTGATCTTGTCTTCACATCCATCCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS TCA 72 bp | TCCAGAACATCCTTCAAGCTTTCTGAACGTGGCAGTTaGTCCAAGGGCACATCGCACACTTTGTACCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SRTSFKLSERGS*SKGTSHTLYLR Trigger: CCGGAGGTACAAAGTGTGCGATGTGCCCTTGGATCAACTGCCACGTTCAGAAAGCTTGAAGGATGTTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045372.6 ENSMUST00000149131.2 |
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| CDS CAA 72 bp | GATGTGAAGACAAGATCAAACTCGAAGTTGAGAGCTTaGAGCTGCCTCCCACAGTTCCGAGCCTCCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: DVKTRSNSKLRA*SCLPQFRASSS Trigger: ACTGGAGGAGGCTCGGAACTGTGGGAGGCAGCTCAAAGCTCTCAACTTCGAGTTTGATCTTGTCTTCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS CAA 90 bp | ATGGACCTGTTAAGGATGGATGTGAAGACAAGATCAAACTCGAAGTaGAGAGCTTTGAGCTGCCTCCCACAGTTCCGAGCCTCCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: MDLLRMDVKTRSNSK*RALSCLPQFRASSS Trigger: ACTGGAGGAGGCTCGGAACTGTGGGAGGCAGCTCAAAGCTCTCAACTTCGAGTTTGATCTTGTCTTCACATCCATCCTTAACAGGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS CCA 72 bp | TTCCGAGCCTCCTCCAGTCCGTCGTTGTTAAGTTTCTaGTCCACCCAACTACAGAATCGGTTCTCCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: FRASSSPSLLSF*STQLQNRFSLF Trigger: GAATAAGGAGAACCGATTCTGTAGTTGGGTGGACCAGAAACTTAACAACGACGGACTGGAGGAGGCTCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS CAA 72 bp | TTAAGGATGGATGTGAAGACAAGATCAAACTCGAAGTaGAGAGCTTTGAGCTGCCTCCCACAGTTCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LRMDVKTRSNSK*RALSCLPQFRA Trigger: GGCTCGGAACTGTGGGAGGCAGCTCAAAGCTCTCAACTTCGAGTTTGATCTTGTCTTCACATCCATCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS TCA 72 bp | GCTCTTCACCATGATTCAAAGCCATTTTCTCCCTGTTaGGGCCAATCAAGGCTCCATAGTGACGCTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: ALHHDSKPFSPC*GQSRLHSDAHS Trigger: TGAATGAGCGTCACTATGGAGCCTTGATTGGCCTCAACAGGGAGAAAATGGCTTTGAATCATGGTGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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| CDS TCA 72 bp | TCCAGTGGGCAGAGTGATGTTGATAATATCCTCGTCTaGGATACCTTCCAGATGTTTCAGGAGAGCTCTACT | + |
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Preference number: 6 (lower is better) Translates to: SSGQSDVDNILV*DTFQMFQESST Trigger: AGTAGAGCTCTCCTGAAACATCTGGAAGGTATCTCAGACGAGGATATTATCAACATCACTCTGCCCACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS GCA 72 bp | GAGCTCTACTGCTATTCCCGTGAGCAGATATCAGAATaGTTTTGCCCTTTAAGATTTCCGGAGCAATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ELYCYSREQISE*FCPLRFPEQSF Trigger: AAAGGATTGCTCCGGAAATCTTAAAGGGCAAAAGCATTCTGATATCTGCTCACGGGAATAGCAGTAGAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS TCA 72 bp | TCCAGATGTTTCAGGAGAGCTCTACTGCTATTCCCGTaGGCAGATATCAGAATGCTTTTGCCCTTTAAGATT | + |
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Preference number: 6 (lower is better) Translates to: SRCFRRALLLFP*ADIRMLLPFKI Trigger: AATCTTAAAGGGCAAAAGCATTCTGATATCTGCTCACGGGAATAGCAGTAGAGCTCTCCTGAAACATCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045372.6 |
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| CDS CCA 72 bp | TCCACCCAACTACAGAATCGGTTCTCCTTATTCCATTaGCCCTCTCCATGTCTTAGTATAATAAGTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: STQLQNRFSLFH*PSPCLSIISLC Trigger: GCACAAACTTATTATACTAAGACATGGAGAGGGCCAATGGAATAAGGAGAACCGATTCTGTAGTTGGGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045372.6 ENSMUST00000138668.2 ENSMUST00000139067.2 ENSMUST00000149131.2 |
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