Pregenerated sensors for BORCS5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042992Ensembl transcript IDs: ENSMUST00000062755.10, ENSMUST00000166591.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCAGACCCAGCTCTTATCTTCGGGCCCGTCCCCTGCACTTATTaGGTCTCTTCCTTCCACAGCAGTCCTGTGACGGGCAGCTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PSDPALIFGPVPCTY*VSSFHSSPVTGSSF Trigger: GAAAGAGCTGCCCGTCACAGGACTGCTGTGGAAGGAAGAGACGCAATAAGTGCAGGGGACGGGCCCGAAGATAAGAGCTGGGTCTGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR TCA 90 bp | GTGTTCTGGCAGGGCAGGAAGACAGTGCCAGATACCTCCTTGATGTaGTGGGGGCCAATGCATAGCAACAGTAGCTGGAGCCAGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: VFWQGRKTVPDTSLM*WGPMHSNSSWSQSA Trigger: TGCTGACTGGCTCCAGCTACTGTTGCTATGCATTGGCCCCCATCACATCAAGGAGGTATCTGGCACTGTCTTCCTGCCCTGCCAGAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR CCA 90 bp | TCCTGGCACATCAGTGGAGGGCCAAGGGTCTCGCATGAGAGAGGGTaGGAGCAAGTGTCAGTGCAAACCTTGTTATGGAAGCCAAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: SWHISGGPRVSHERG*EQVSVQTLLWKPRS Trigger: AGACCTTGGCTTCCATAACAAGGTTTGCACTGACACTTGCTCCCACCCTCTCTCATGCGAGACCCTTGGCCCTCCACTGATGTGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR TCA 90 bp | AGATGGTGTTCTGGCAGGGCAGGAAGACAGTGCCAGATACCTCCTTaGTGTGATGGGGGCCAATGCATAGCAACAGTAGCTGGAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: RWCSGRAGRQCQIPP*CDGGQCIATVAGAS Trigger: ACTGGCTCCAGCTACTGTTGCTATGCATTGGCCCCCATCACATCAAGGAGGTATCTGGCACTGTCTTCCTGCCCTGCCAGAACACCATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR GCA 90 bp | GTGGGAGCAAGTGTCAGTGCAAACCTTGTTATGGAAGCCAAGGTCTaGCAGGCTGGCAGAAGCCTGAGCTCTGAATGGAAAAGCGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: VGASVSANLVMEAKV*QAGRSLSSEWKSGS Trigger: AGAACCGCTTTTCCATTCAGAGCTCAGGCTTCTGCCAGCCTGGCAGACCTTGGCTTCCATAACAAGGTTTGCACTGACACTTGCTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR CCA 90 bp | ATGGAAGCCAAGGTCTGCCAGGCTGGCAGAAGCCTGAGCTCTGAATaGAAAAGCGGTTCTAATGGGAAACACCTTCATGAGTGCATGACG | + |
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Preference number: 1 (lower is better) Translates to: MEAKVCQAGRSLSSE*KSGSNGKHLHECMT Trigger: CGTCATGCACTCATGAAGGTGTTTCCCATTAGAACCGCTTTTCCATTCAGAGCTCAGGCTTCTGCCAGCCTGGCAGACCTTGGCTTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR CAA 90 bp | CCCCTCAGACCCAGCTCTTATCTTCGGGCCCGTCCCCTGCACTTATaGCGTCTCTTCCTTCCACAGCAGTCCTGTGACGGGCAGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PLRPSSYLRARPLHL*RLFLPQQSCDGQLF Trigger: AAAGAGCTGCCCGTCACAGGACTGCTGTGGAAGGAAGAGACGCAATAAGTGCAGGGGACGGGCCCGAAGATAAGAGCTGGGTCTGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGGAGGAACACAGGGACGAAGGGGAGGCTGTAGACTCCCAGCCCTGACAGCCTGTGATGGGGGCCAATaGATAGCAACAGTAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SGGTQGRRGGCRLPALTACDGGQ*IATVAG Trigger: TCCAGCTACTGTTGCTATGCATTGGCCCCCATCACA...GGCTGTCAGGGCTGGGAGTCTACAGCCTCCCCTTCGTCCCTGTGTTCCTCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAAGCCTGAGCTCTGAATGGAAAAGCGGTTCTAATGGGAAACACCTTCATGGCCCAGGGGAAGGCTaGAGGAGCTGTGTGCGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GRSLSSEWKSGSNGKHLHGPGEG*RSCVRR Trigger: CCTGCGCACACAGCTCCTCCAGCCTTCCCCTGGGCC...ATGAAGGTGTTTCCCATTAGAACCGCTTTTCCATTCAGAGCTCAGGCTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCCGTCCCCTGCACTTATTGCGTCTCTTCCTTCCACAGCAGTCCTGTGACGTGCAAACCTTGTTATaGAAGCCAAGGTCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RARPLHLLRLFLPQQSCDVQTLL*KPRSAR Trigger: CCTGGCAGACCTTGGCTTCCATAACAAGGTTTGCAC...GTCACAGGACTGCTGTGGAAGGAAGAGACGCAATAAGTGCAGGGGACGGGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR-3UTR GCA 90 bp | AACCTTGTTATGGAAGCCAAGGTCTGCCAGGCTGGCAGAAGCCTGAGCTCTGAAACAGATCAGAGAGCCTaGGTCAAGTCTCACGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: NLVMEAKVCQAGRSLSSETDQRA*VKSHEA Trigger: CGCCTCGTGAGACTTGACGCAGGCTCTCTGATCTGT...TTCAGAGCTCAGGCTTCTGCCAGCCTGGCAGACCTTGGCTTCCATAACAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAAGGGTCTCGCATGAGAGAGGGTGGGAGCAAGTGTCAGTGCAAACCTTGAAAAAGATGGTGTTCTaGCAGGGCAGGAAGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: GPRVSHERGWEQVSVQTLKKMVF*QGRKTV Trigger: CACTGTCTTCCTGCCCTGCCAGAACACCATCTTTTT...CAAGGTTTGCACTGACACTTGCTCCCACCCTCTCTCATGCGAGACCCTTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAAGGGTCTCGCATGAGAGAGGGTGGGAGCAAGTGTCAGTGCAAACCTTGAGCCTGAGCTCTGAATaGAAAAGCGGTTCTAATGGG | + |
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Preference number: 2 (lower is better) Translates to: GPRVSHERGWEQVSVQTLSLSSE*KSGSNG Trigger: CCCATTAGAACCGCTTTTCCATTCAGAGCTCAGGCT...CAAGGTTTGCACTGACACTTGCTCCCACCCTCTCTCATGCGAGACCCTTGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR-3UTR TCA 90 bp | GGCAGAAGCCTGAGCTCTGAATGGAAAAGCGGTTCTAATGGGAAACACCTTCATTGCCAGATACCTCCTTaGTGTGATGGGGGCCAATGC | + |
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Preference number: 2 (lower is better) Translates to: GRSLSSEWKSGSNGKHLHCQIPP*CDGGQC Trigger: GCATTGGCCCCCATCACATCAAGGAGGTATCTGGCA...ATGAAGGTGTTTCCCATTAGAACCGCTTTTCCATTCAGAGCTCAGGCTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR GCA 72 bp | CCAGCTCTTATCTTCGGGCCCGTCCCCTGCACTTATTaGGTCTCTTCCTTCCACAGCAGTCCTGTGACGGGC | + |
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Preference number: 3 (lower is better) Translates to: PALIFGPVPCTY*VSSFHSSPVTG Trigger: GCCCGTCACAGGACTGCTGTGGAAGGAAGAGACGCAATAAGTGCAGGGGACGGGCCCGAAGATAAGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR TCA 72 bp | GCACTTATTGCGTCTCTTCCTTCCACAGCAGTCCTGTaGCGGGCAGCTCTTTCCCCAGCTTCACGCCCTACA | + |
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Preference number: 3 (lower is better) Translates to: ALIASLPSTAVL*RAALSPASRPT Trigger: TGTAGGGCGTGAAGCTGGGGAAAGAGCTGCCCGTCACAGGACTGCTGTGGAAGGAAGAGACGCAATAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR TCA 72 bp | TCTGGCAGGGCAGGAAGACAGTGCCAGATACCTCCTTaGTGTGATGGGGGCCAATGCATAGCAACAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SGRAGRQCQIPP*CDGGQCIATVA Trigger: AGCTACTGTTGCTATGCATTGGCCCCCATCACATCAAGGAGGTATCTGGCACTGTCTTCCTGCCCTGCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR CCA 72 bp | ATCAGTGGAGGGCCAAGGGTCTCGCATGAGAGAGGGTaGGAGCAAGTGTCAGTGCAAACCTTGTTATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ISGGPRVSHERG*EQVSVQTLLWK Trigger: CTTCCATAACAAGGTTTGCACTGACACTTGCTCCCACCCTCTCTCATGCGAGACCCTTGGCCCTCCACTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR TCA 72 bp | TTATGGAAGCCAAGGTCTGCCAGGCTGGCAGAAGCCTaGGCTCTGAATGGAAAAGCGGTTCTAATGGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: LWKPRSARLAEA*ALNGKAVLMGN Trigger: GTTTCCCATTAGAACCGCTTTTCCATTCAGAGCTCAGGCTTCTGCCAGCCTGGCAGACCTTGGCTTCCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR GCA 72 bp | AGTGTCAGTGCAAACCTTGTTATGGAAGCCAAGGTCTaGCAGGCTGGCAGAAGCCTGAGCTCTGAATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SVSANLVMEAKV*QAGRSLSSEWK Trigger: TTTCCATTCAGAGCTCAGGCTTCTGCCAGCCTGGCAGACCTTGGCTTCCATAACAAGGTTTGCACTGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR CCA 72 bp | AAGGTCTGCCAGGCTGGCAGAAGCCTGAGCTCTGAATaGAAAAGCGGTTCTAATGGGAAACACCTTCATGAG | + |
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Preference number: 3 (lower is better) Translates to: KVCQAGRSLSSE*KSGSNGKHLHE Trigger: CTCATGAAGGTGTTTCCCATTAGAACCGCTTTTCCATTCAGAGCTCAGGCTTCTGCCAGCCTGGCAGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| CDS-3UTR TCA 90 bp | GTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGCGCTCAGGCTTCATGCTaGAGGGCTCCAGGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VGQTHLGKRQGPGEGWRSAQASC*RAPGAQ Trigger: CTGAGCGCCTGGAGCCCTTCAGCATGAAGCCTGAGC...GCTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | GTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGCCAGGCGCTCAGCCTCTaGCAGCATGCTGTTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: VGQTHLGKRQGPGEGWRSQALSL*QHAVQP Trigger: CGGCTGAACAGCATGCTGCCAGAGGCTGAGCGCCTG...GCTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR TCA 90 bp | AGTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGCGCACTGGTGCAGGTaGTCCTGGTACCGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SPCGSDTSRQTSGPRGRLAHWCR*SWYRRQ Trigger: CTGCCTCCGGTACCAGGATCACCTGCACCAGTGCGC...CAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR GCA 90 bp | GTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGCCTATGCCCATCTGGATaGGGCGCAGGATGGCCGACA | + |
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Preference number: 4 (lower is better) Translates to: VGQTHLGKRQGPGEGWRSLCPSG*GAGWPT Trigger: TGTCGGCCATCCTGCGCCGCATCCAGATGGGCATAG...GCTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR TCA 90 bp | CCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGATTGCTGACATTCCGTaGGGCCTGAGAGCCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PCGSDTSRQTSGPRGRLEIADIP*GLRALS Trigger: GCTCAGGGCTCTCAGGCCTCACGGAATGTCAGCAAT...CTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR TCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGATTGCTGACATTCCGTaGGGCCTGAGAGCCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEEIADIP*GLRALS Trigger: GCTCAGGGCTCTCAGGCCTCACGGAATGTCAGCAAT...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR TCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGCATCGGGGTCATTGCTaGCATTCCGTGAGGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEEHRGHC*HSVRPE Trigger: CTCAGGCCTCACGGAATGTCAGCAATGACCCCGATG...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR GCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGGAAAGCCACTGCCTCTaGGCACTGGTGCAGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEEESHCL*ALVQVI Trigger: GATCACCTGCACCAGTGCGCAGAGGCAGTGGCTTTC...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR GCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGCTGATCGAAAGCCACTaGCTCTGCGCACTGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEELIESH*LCALVQ Trigger: CTGCACCAGTGCGCAGAGGCAGTGGCTTTCGATCAG...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR GCA 90 bp | GTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGCTGATCGAAAGCCACTaGCTCTGCGCACTGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VHVGQTHLGKRQGPGEGWLIESH*LCALVQ Trigger: CTGCACCAGTGCGCAGAGGCAGTGGCTTTCGATCAG...CCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR GCA 90 bp | CGGGCAGCTCTTTCCCCAGCTTCACGCCCTACAGTCGGCAGGGCGGGCAGAGGCTTCACCTTCTGGATCTaGTCTGCATACTTGGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: RAALSPASRPTVGRAGRGFTFWI*SAYLAY Trigger: ATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAA...GCCTCTGCCCGCCCTGCCGACTGTAGGGCGTGAAGCTGGGGAAAGAGCTGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| 3UTR CAA 72 bp | CCCAGCTCTTATCTTCGGGCCCGTCCCCTGCACTTATaGCGTCTCTTCCTTCCACAGCAGTCCTGTGACGGG | + |
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Preference number: 4 (lower is better) Translates to: PSSYLRARPLHL*RLFLPQQSCDG Trigger: CCCGTCACAGGACTGCTGTGGAAGGAAGAGACGCAATAAGTGCAGGGGACGGGCCCGAAGATAAGAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| CDS-3UTR TCA 90 bp | AGTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGCATCGGGGTCATTGCTaGCATTCCGTGAGGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SPCGSDTSRQTSGPRGRLHRGHC*HSVRPE Trigger: CTCAGGCCTCACGGAATGTCAGCAATGACCCCGATG...CAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR TCA 90 bp | GTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGCTGCAGCACCTGCTaGGAGTCTAGCTTCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VHVGQTHLGKRQGPGEGWSCSTC*ESSFSS Trigger: ACTGGAGAAGCTAGACTCTCAGCAGGTGCTGCAGCT...CCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR TCA 90 bp | GTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGCTCTGGCGCTCCTGCATaGAGCAAAAGAGGGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VGQTHLGKRQGPGEGWRSSGAPA*SKRGFP Trigger: TGGAAACCCTCTTTTGCTTCATGCAGGAGCGCCAGA...GCTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR TCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGTCTGGCGCTCCTGCATaGAGCAAAAGAGGGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEESGAPA*SKRGFP Trigger: TGGAAACCCTCTTTTGCTTCATGCAGGAGCGCCAGA...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | CCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGATCAGTGGCACCGTCTaGTCTATGCCCATCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: PCGSDTSRQTSGPRGRLEISGTV*SMPIWM Trigger: CATCCAGATGGGCATAGACCAGACGGTGCCACTGAT...CTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGATCAGTGGCACCGTCTaGTCTATGCCCATCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEEISGTV*SMPIWM Trigger: CATCCAGATGGGCATAGACCAGACGGTGCCACTGAT...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGTCTCCAGTTTGGCATTaGTTGGGGAAGTCTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEESPVWH*LGKSVH Trigger: GTGGACAGACTTCCCCAACCAATGCCAAACTGGAGA...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | TCTGGAGGAACACAGGGACGAAGGGGAGGCTGTAGACTCCCAGCCCTGACAGCCTTGGCGTATCTTTTCTaGCGCTCCTGCATGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SGGTQGRRGGCRLPALTALAYLF*RSCMKQ Trigger: TTGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAA...GGCTGTCAGGGCTGGGAGTCTACAGCCTCCCCTTCGTCCCTGTGTTCCTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
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| CDS-3UTR GCA 90 bp | CCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGCTTTTCTGGCGCTCCTaGATGAAGCAAAAGAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: PCGSDTSRQTSGPRGRLELFWRS*MKQKRV Trigger: AACCCTCTTTTGCTTCATGCAGGAGCGCCAGAAAAG...CTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR GCA 90 bp | GTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGCTTCACCTTCTGGATCTaGTCTGCATACTTGGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: VGQTHLGKRQGPGEGWRSFTFWI*SAYLAY Trigger: ATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAA...GCTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | AGTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGTCTCCAGTTTGGCATTaGTTGGGGAAGTCTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SPCGSDTSRQTSGPRGRLSPVWH*LGKSVH Trigger: GTGGACAGACTTCCCCAACCAATGCCAAACTGGAGA...CAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | GTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGCTAGCTTCTCCAGTTTaGCATTGGTTGGGGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VHVGQTHLGKRQGPGEGWLASPV*HWLGKS Trigger: AGACTTCCCCAACCAATGCCAAACTGGAGAAGCTAG...CCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS-3UTR CCA 90 bp | CCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGTCTGCTCTGCATACTTaGCGTATCTTTTCTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCGSDTSRQTSGPRGRLESALHT*RIFSGA Trigger: AGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGA...CTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCTCTGAATGGAAAAGCGGTTCTAATGGGAAACACCTTCATGAGTGCATGGCGCACTGGTGCAGGTaGTCCTGGTACCGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSEWKSGSNGKHLHECMAHWCR*SWYRRQ Trigger: CTGCCTCCGGTACCAGGATCACCTGCACCAGTGCGC...CATGCACTCATGAAGGTGTTTCCCATTAGAACCGCTTTTCCATTCAGAGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS-3UTR TCA 90 bp | GGAAAAACAAAAAGATGGTGTTCTGGCAGGGCAGGAAGACAGTGCCAGATACCTGCTCAGGCTTCATGCTaGAGGGCTCCAGGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKTKRWCSGRAGRQCQIPAQASC*RAPGAQ Trigger: CTGAGCGCCTGGAGCCCTTCAGCATGAAGCCTGAGC...AGGTATCTGGCACTGTCTTCCTGCCCTGCCAGAACACCATCTTTTTGTTTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS-3UTR GCA 90 bp | AGTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGCTTTTCTGGCGCTCCTaGATGAAGCAAAAGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPCGSDTSRQTSGPRGRLLFWRS*MKQKRV Trigger: AACCCTCTTTTGCTTCATGCAGGAGCGCCAGAAAAG...CAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGAGGAACACAGGGACGAAGGGGAGGCTGTAGACTCCCAGCCCTGACAGCCCTTCTGGATCTGCTCTaGATACTTGGCGTATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGGTQGRRGGCRLPALTALLDLL*ILGVSF Trigger: AAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAG...GGCTGTCAGGGCTGGGAGTCTACAGCCTCCCCTTCGTCCCTGTGTTCCTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS-3UTR GCA 90 bp | GTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGCTTCTGGATCTGCTCTaGATACTTGGCGTATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHVGQTHLGKRQGPGEGWLLDLL*ILGVSF Trigger: AAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAG...CCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGATCTCATTCACCTTCTaGATCTGCTCTGCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGSDTSRQTSGPRGRLEEISFTF*ICSAYL Trigger: CAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGAT...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCTTTACAGGATTTCTGGAAATTCAACTGTCCCAACTTCGGTTCTCAAGCAGGCGCTCAGCCTCTaGCAGCATGCTGTTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KVLYRISGNSTVPTSVLKQALSL*QHAVQP Trigger: CGGCTGAACAGCATGCTGCCAGAGGCTGAGCGCCTG...CTTGAGAACCGAAGTTGGGACAGTTGAATTTCCAGAAATCCTGTAAAGAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCTTTACAGGATTTCTGGAAATTCAACTGTCCCAACTTCGGTTCTCAAGCTATGCCCATCTGGATaGGGCGCAGGATGGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: KVLYRISGNSTVPTSVLKLCPSG*GAGWPT Trigger: TGTCGGCCATCCTGCGCCGCATCCAGATGGGCATAG...CTTGAGAACCGAAGTTGGGACAGTTGAATTTCCAGAAATCCTGTAAAGAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS-3UTR CCA 90 bp | TTGATGCAAAGTTCTTTACAGGATTTCTGGAAATTCAACTGTCCCAACTTCGGTCTAGCTTCTCCAGTTTaGCATTGGTTGGGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LMQSSLQDFWKFNCPNFGLASPV*HWLGKS Trigger: AGACTTCCCCAACCAATGCCAAACTGGAGAAGCTAG...ACCGAAGTTGGGACAGTTGAATTTCCAGAAATCCTGTAAAGAACTTTGCATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS CCA 90 bp | CAGGCGCTCAGCCTCTGGCAGCATGCTGTTCAGCCGCTCCATCAGTaGCACCGTCTGGTCTATGCCCATCTGGATGCGGCGCAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QALSLWQHAVQPLHQ*HRLVYAHLDAAQDG Trigger: GCCATCCTGCGCCGCATCCAGATGGGCATAGACCAGACGGTGCCACTGATGGAGCGGCTGAACAGCATGCTGCCAGAGGCTGAGCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CCA 90 bp | CTCCCGCTCAGGCTTCATGCTGAAGGGCTCCAGGCGCTCAGCCTCTaGCAGCATGCTGTTCAGCCGCTCCATCAGTGGCACCGTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLRLHAEGLQALSL*QHAVQPLHQWHRLV Trigger: GACCAGACGGTGCCACTGATGGAGCGGCTGAACAGCATGCTGCCAGAGGCTGAGCGCCTGGAGCCCTTCAGCATGAAGCCTGAGCGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | CGGGCAGCTCTTTCCCCAGCTTCACGCCCTACAGTCGGCAGGGCGGGCAGAGGCCCAGTTTGGCATTGGTaGGGGAAGTCTGTCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAALSPASRPTVGRAGRGPVWHW*GKSVHS Trigger: TGAGTGGACAGACTTCCCCAACCAATGCCAAACTGG...GCCTCTGCCCGCCCTGCCGACTGTAGGGCGTGAAGCTGGGGAAAGAGCTGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS CCA 90 bp | GCCTCTGGCAGCATGCTGTTCAGCCGCTCCATCAGTGGCACCGTCTaGTCTATGCCCATCTGGATGCGGCGCAGGATGGCCGACATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGSMLFSRSISGTV*SMPIWMRRRMADIS Trigger: TGAGATGTCGGCCATCCTGCGCCGCATCCAGATGGGCATAGACCAGACGGTGCCACTGATGGAGCGGCTGAACAGCATGCTGCCAGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS GCA 90 bp | GCAGCATGCTGTTCAGCCGCTCCATCAGTGGCACCGTCTGGTCTATaGCCATCTGGATGCGGCGCAGGATGGCCGACATCTCATTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AACCSAAPSVAPSGL*PSGCGAGWPTSHSP Trigger: AGGTGAATGAGATGTCGGCCATCCTGCGCCGCATCCAGATGGGCATAGACCAGACGGTGCCACTGATGGAGCGGCTGAACAGCATGCTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS GCA 90 bp | TCAGCCGCTCCATCAGTGGCACCGTCTGGTCTATGCCCATCTGGATaGGGCGCAGGATGGCCGACATCTCATTCACCTTCTGGATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SAAPSVAPSGLCPSG*GAGWPTSHSPSGSA Trigger: AGCAGATCCAGAAGGTGAATGAGATGTCGGCCATCCTGCGCCGCATCCAGATGGGCATAGACCAGACGGTGCCACTGATGGAGCGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGATGACATCGGGGTCATaGCTGACATTCCGTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPCGSDTSRQTSGPRGRLMTSGS*LTFREA Trigger: GGCCTCACGGAATGTCAGCAATGACCCCGATGTCAT...CAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CCA 90 bp | CCCATCTGGATGCGGCGCAGGATGGCCGACATCTCATTCACCTTCTaGATCTGCTCTGCATACTTGGCGTATCTTTTCTGGCGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PIWMRRRMADISFTF*ICSAYLAYLFWRSC Trigger: GCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGATGTCGGCCATCCTGCGCCGCATCCAGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CCA 90 bp | TCAGTGGCACCGTCTGGTCTATGCCCATCTGGATGCGGCGCAGGATaGCCGACATCTCATTCACCTTCTGGATCTGCTCTGCATACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVAPSGLCPSGCGAG*PTSHSPSGSALHTW Trigger: CCAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGATGTCGGCCATCCTGCGCCGCATCCAGATGGGCATAGACCAGACGGTGCCACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGTTCTCCAGTTTGGCATaGGTTGGGGAAGTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCGSDTSRQTSGPRGRLEFSSLA*VGEVCP Trigger: TGGACAGACTTCCCCAACCAATGCCAAACTGGAGAA...CTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGTCTAGCTTCTCCAGTTaGGCATTGGTTGGGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CGSDTSRQTSGPRGRLEESSFSS*ALVGEV Trigger: GACTTCCCCAACCAATGCCAAACTGGAGAAGCTAGA...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGATCTGCTCTGCATACTaGGCGTATCTTTTCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HVGQTHLGKRQGPGEGWRICSAY*AYLFWR Trigger: GCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGAT...CCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGAGGGAATCTCTTGTAGCTaGATGACATCGGGGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: CGSDTSRQTSGPRGRLEEGISCS*MTSGSL Trigger: CAATGACCCCGATGTCATCAAGCTACAAGAGATTCC...CTCCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGGGTCAGACACATCTAGGCAAACGTCAGGGCCCAGGGGAAGGCTGGAGGGGAATCTCTTGTAGCTaGATGACATCGGGGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HVGQTHLGKRQGPGEGWRGISCS*MTSGSL Trigger: CAATGACCCCGATGTCATCAAGCTACAAGAGATTCC...CCTCCAGCCTTCCCCTGGGCCCTGACGTTTGCCTAGATGTGTCTGACCCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS GCA 90 bp | TGGATGCGGCGCAGGATGGCCGACATCTCATTCACCTTCTGGATCTaGTCTGCATACTTGGCGTATCTTTTCTGGCGCTCCTGCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WMRRRMADISFTFWI*SAYLAYLFWRSCMK Trigger: CTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGATGTCGGCCATCCTGCGCCGCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS GCA 90 bp | GCGGCGCAGGATGGCCGACATCTCATTCACCTTCTGGATCTGCTCTaGATACTTGGCGTATCTTTTCTGGCGCTCCTGCATGAAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AAQDGRHLIHLLDLL*ILGVSFLALLHEAK Trigger: TTTTGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGATGTCGGCCATCCTGCGCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGCTGGCAGAAGCCTGAGCTCTGAATGGAAAAGCGGTTCTAATGGGAAAATGACATCGGGGTCATaGCTGACATTCCGTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CQAGRSLSSEWKSGSNGKMTSGS*LTFREA Trigger: GGCCTCACGGAATGTCAGCAATGACCCCGATGTCAT...TTTCCCATTAGAACCGCTTTTCCATTCAGAGCTCAGGCTTCTGCCAGCCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS CCA 90 bp | GGAGGCAGAGCTGCAGCACCTGCTGAGAGTCTAGCTTCTCCAGTTTaGCATTGGTTGGGGAAGTCTGTCCACTCAAGAGCCCTTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGRAAAPAESLASPV*HWLGKSVHSRALLK Trigger: TTTTAAAAGGGCTCTTGAGTGGACAGACTTCCCCAACCAATGCCAAACTGGAGAAGCTAGACTCTCAGCAGGTGCTGCAGCTCTGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | AACCTTGTTATGGAAGCCAAGGTCTGCCAGGCTGGCAGAAGCCTGAGCTCTGAAATCTGCTCTGCATACTaGGCGTATCTTTTCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NLVMEAKVCQAGRSLSSEICSAY*AYLFWR Trigger: GCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGAT...TTCAGAGCTCAGGCTTCTGCCAGCCTGGCAGACCTTGGCTTCCATAACAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS CCA 90 bp | TACCACCACGATATCGTCCATCTTGGCCCGATGTTTAGCCGGAGATaGAGTCACTTGTTTTCTAGGCTCCAGATGCCTGTACACCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YHHDIVHLGPMFSRR*SHLFSRLQMPVHQC Trigger: ACACTGGTGTACAGGCATCTGGAGCCTAGAAAACAAGTGACTCCATCTCCGGCTAAACATCGGGCCAAGATGGACGATATCGTGGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166591.8 |
||
| CDS CCA 90 bp | TCATTCACCTTCTGGATCTGCTCTGCATACTTGGCGTATCTTTTCTaGCGCTCCTGCATGAAGCAAAAGAGGGTTTCCACGGACAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SFTFWICSAYLAYLF*RSCMKQKRVSTDRS Trigger: GGATCTGTCCGTGGAAACCCTCTTTTGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS GCA 90 bp | TTCTGGATCTGCTCTGCATACTTGGCGTATCTTTTCTGGCGCTCCTaGATGAAGCAAAAGAGGGTTTCCACGGACAGATCCATCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FWICSAYLAYLFWRS*MKQKRVSTDRSISL Trigger: CAAAGAGATGGATCTGTCCGTGGAAACCCTCTTTTGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGTTCTTTACAGGATTTCTGGAAATTCAACTGTCCCAACTTCGGTTCTCTTCTCCAGTTTGGCATaGGTTGGGGAAGTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CKVLYRISGNSTVPTSVLFSSLA*VGEVCP Trigger: TGGACAGACTTCCCCAACCAATGCCAAACTGGAGAA...GAGAACCGAAGTTGGGACAGTTGAATTTCCAGAAATCCTGTAAAGAACTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGTTCTTTACAGGATTTCTGGAAATTCAACTGTCCCAACTTCGGTTCTCTCTAGCTTCTCCAGTTaGGCATTGGTTGGGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CKVLYRISGNSTVPTSVLSSFSS*ALVGEV Trigger: GACTTCCCCAACCAATGCCAAACTGGAGAAGCTAGA...GAGAACCGAAGTTGGGACAGTTGAATTTCCAGAAATCCTGTAAAGAACTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS TCA 72 bp | CATCTTGGCCCGATGTTTAGCCGGAGATGGAGTCACTaGGGCGTTCAGATCGCCGGGGCGGCTCTCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HLGPMFSRRWSH*GVQIAGAALGL Trigger: GAGGCCGAGAGCCGCCCCGGCGATCTGAACGCCTCAGTGACTCCATCTCCGGCTAAACATCGGGCCAAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062755.10 |
||
| CDS CCA 72 bp | AGCATGCTGTTCAGCCGCTCCATCAGTGGCACCGTCTaGTCTATGCCCATCTGGATGCGGCGCAGGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SMLFSRSISGTV*SMPIWMRRRMA Trigger: GGCCATCCTGCGCCGCATCCAGATGGGCATAGACCAGACGGTGCCACTGATGGAGCGGCTGAACAGCATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CCA 72 bp | AGCCTCTGGCAGCATGCTGTTCAGCCGCTCCATCAGTaGCACCGTCTGGTCTATGCCCATCTGGATGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLWQHAVQPLHQ*HRLVYAHLDAA Trigger: CGCCGCATCCAGATGGGCATAGACCAGACGGTGCCACTGATGGAGCGGCTGAACAGCATGCTGCCAGAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CCA 72 bp | AGGCTTCATGCTGAAGGGCTCCAGGCGCTCAGCCTCTaGCAGCATGCTGTTCAGCCGCTCCATCAGTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLHAEGLQALSL*QHAVQPLHQWH Trigger: GTGCCACTGATGGAGCGGCTGAACAGCATGCTGCCAGAGGCTGAGCGCCTGGAGCCCTTCAGCATGAAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CCA 72 bp | CCGTCTGGTCTATGCCCATCTGGATGCGGCGCAGGATaGCCGACATCTCATTCACCTTCTGGATCTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSGLCPSGCGAG*PTSHSPSGSAL Trigger: CAGAGCAGATCCAGAAGGTGAATGAGATGTCGGCCATCCTGCGCCGCATCCAGATGGGCATAGACCAGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CCA 72 bp | GCTGCAGCACCTGCTGAGAGTCTAGCTTCTCCAGTTTaGCATTGGTTGGGGAAGTCTGTCCACTCAAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAPAESLASPV*HWLGKSVHSRA Trigger: GGCTCTTGAGTGGACAGACTTCCCCAACCAATGCCAAACTGGAGAAGCTAGACTCTCAGCAGGTGCTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS TCA 72 bp | AGATCCATCTCTTTGATTCGCTTGACTAGAGCATTCTaGTCGAAAGCCACTGCCTCTGCGCACTGGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSISLIRLTRAF*SKATASAHWCR Trigger: CCTGCACCAGTGCGCAGAGGCAGTGGCTTTCGATCAGAATGCTCTAGTCAAGCGAATCAAAGAGATGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS GCA 72 bp | GATGGCCGACATCTCATTCACCTTCTGGATCTGCTCTaGATACTTGGCGTATCTTTTCTGGCGCTCCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DGRHLIHLLDLL*ILGVSFLALLH Trigger: ATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGATGTCGGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS GCA 72 bp | GCCGGAGATGGAGTCACTTGTTTTCTAGGCTCCAGATaGCTGTACACCAGTGTTGCTGTTCTCAGTGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: AGDGVTCFLGSR*LYTSVAVLSGT Trigger: AGTACCACTGAGAACAGCAACACTGGTGTACAGGCATCTGGAGCCTAGAAAACAAGTGACTCCATCTCCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166591.8 |
||
| CDS CCA 72 bp | GCACCTGCTGAGAGTCTAGCTTCTCCAGTTTGGCATTaGTTGGGGAAGTCTGTCCACTCAAGAGCCCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: APAESLASPVWH*LGKSVHSRALL Trigger: TAAAAGGGCTCTTGAGTGGACAGACTTCCCCAACCAATGCCAAACTGGAGAAGCTAGACTCTCAGCAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
||
| CDS CAA 90 bp | AGGATGGCCGACATCTCATTCACCTTCTGGATCTGCTCTGCATACTaGGCGTATCTTTTCTGGCGCTCCTGCATGAAGCAAAAGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RMADISFTFWICSAY*AYLFWRSCMKQKRV Trigger: AACCCTCTTTTGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGATGTCGGCCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS CAA 90 bp | GATATCGTCCATCTTGGCCCGATGTTTAGCCGGAGATGGAGTCACTaGTTTTCTAGGCTCCAGATGCCTGTACACCAGTGTTGCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: DIVHLGPMFSRRWSH*FSRLQMPVHQCCCS Trigger: AGAACAGCAACACTGGTGTACAGGCATCTGGAGCCTAGAAAACAAGTGACTCCATCTCCGGCTAAACATCGGGCCAAGATGGACGATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166591.8 |
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| CDS TCA 72 bp | CTGCATACTTGGCGTATCTTTTCTGGCGCTCCTGCATaGAGCAAAAGAGGGTTTCCACGGACAGATCCATCT | + |
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Preference number: 6 (lower is better) Translates to: LHTWRIFSGAPA*SKRGFPRTDPS Trigger: AGATGGATCTGTCCGTGGAAACCCTCTTTTGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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| CDS CCA 72 bp | GATATCGTCCATCTTGGCCCGATGTTTAGCCGGAGATaGAGTCACTTGTTTTCTAGGCTCCAGATGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: DIVHLGPMFSRR*SHLFSRLQMPV Trigger: TACAGGCATCTGGAGCCTAGAAAACAAGTGACTCCATCTCCGGCTAAACATCGGGCCAAGATGGACGATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166591.8 |
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| CDS CAA 72 bp | GACATCTCATTCACCTTCTGGATCTGCTCTGCATACTaGGCGTATCTTTTCTGGCGCTCCTGCATGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: DISFTFWICSAY*AYLFWRSCMKQ Trigger: TTGCTTCATGCAGGAGCGCCAGAAAAGATACGCCAAGTATGCAGAGCAGATCCAGAAGGTGAATGAGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062755.10 ENSMUST00000166591.8 |
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