Pregenerated sensors for BOP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022557Ensembl transcript IDs: ENSMUST00000023217.11
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTaGTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAG | + |
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Preference number: 1 (lower is better) Translates to: LYQYHLPFWLKPGSG*CVRSRLGSCWRLNQ Trigger: CTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR CCA 90 bp | AAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTaGAGGCTGAATCAGGAAGACAGGAAGAATGGGATTCTATTGAGG | + |
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Preference number: 1 (lower is better) Translates to: KPGSGCCVRSRLGSC*RLNQEDRKNGILLR Trigger: CCTCAATAGAATCCCATTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR GCA 90 bp | CTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTaGTGGAGGCTGAATCAGGAAGACAGGAAGAATGGGATTCTATTG | + |
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Preference number: 1 (lower is better) Translates to: LKPGSGCCVRSRLGS*WRLNQEDRKNGILL Trigger: CAATAGAATCCCATTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR CCA 90 bp | TGTGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTaGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CGAPIYCPIKPVTPQ*VTLYQYHLPFWLKP Trigger: TGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR-3UTR TCA 90 bp | TGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGTAGCAGTTGCTGGAGGCTaGATCAGGAAGACAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: CPNLLPNKASYTSVGDIVAVAGG*IRKTGR Trigger: TCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGC...TACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR CAA 90 bp | CCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATaGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PIYCPIKPVTPQWVT*YQYHLPFWLKPGSG Trigger: CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR GCA 72 bp | TACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTaGTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: YHLPFWLKPGSG*CVRSRLGSCWR Trigger: CCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR CCA 72 bp | AGACAGGAAGAATGGGATTCTATTGAGGATTCTGTGTaGAGGCACACCCACCCTCTTCCAGGCCACCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: RQEEWDSIEDSV*RHTHPLPGHPE Trigger: CTCTGGGTGGCCTGGAAGAGGGTGGGTGTGCCTCCACACAGAATCCTCAATAGAATCCCATTCTTCCTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR CCA 72 bp | CAGTGGGTGACATTGTATCAATACCACCTTCCCTTCTaGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: QWVTLYQYHLPF*LKPGSGCCVRS Trigger: TGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR-3UTR CAA 90 bp | TGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGTAAAGAATGGGATTCTATaGAGGATTCTGTGTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: CPNLLPNKASYTSVGDIVKNGIL*RILCGG Trigger: GCCTCCACACAGAATCCTCAATAGAATCCCATTCTT...TACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| 3UTR CCA 72 bp | CCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTaGGTGACATTGTATCAATACCACCTTCCCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PIYCPIKPVTPQ*VTLYQYHLPFW Trigger: CCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | AAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAGTGGGTATCGGGGGTaGAAGGCCACAGCCCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KPGSGCCVRSRLGSCWRLSGYRG*KATARK Trigger: CTTGCGGGCTGTGGCCTTCCACCCCCGATACCCACT...CAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | CAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCACACTGCACCTGCCCGTaGCTGCGGCGGAACGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QYHLPFWLKPGSGCCVRSHCTCP*LRRNGL Trigger: GAGCCCGTTCCGCCGCAGCCACGGGCAGGTGCAGTG...TGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR TCA 90 bp | CTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCGCTCCTCAGGTGGAGTaGAGGCTTCCAGCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LPFWLKPGSGCCVRSRLGAPQVE*RLPAAG Trigger: ACCAGCTGCTGGAAGCCTTCACTCCACCTGAGGAGC...GCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | GTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAATCCGGTCCCCCAGGGCTaGGTTCAGCAGCAACACGGC | + |
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Preference number: 4 (lower is better) Translates to: VRSRLGSCWRLNQEDRKNPVPQG*VQQQHG Trigger: GCCGTGTTGCTGCTGAACCCAGCCCTGGGGGACCGG...ATTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR TCA 90 bp | AAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGTGGAGTCAGGATCGCTaGGGAGAGGAGGCTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: KPGSGCCVRSRLGSCWRLWSQDR*GEEALV Trigger: TACAAGAGCCTCCTCTCCTCAGCGATCCTGACTCCA...CAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | CTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCACTACGCTTGTCAGCTaGGCGGTTGGTCACAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPFWLKPGSGCCVRSRLGTTLVS*AVGHRV Trigger: CACCCTGTGACCAACCGCCCAGCTGACAAGCGTAGT...GCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | CAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCACTAGGGGTGGGGTCGTaGGGCCGTCGAGGCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: QYHLPFWLKPGSGCCVRSLGVGS*GRRGLI Trigger: GATCAAGCCTCGACGGCCCCACGACCCCACCCCTAG...TGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | CACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGCCGGATGCAAAGAGTaGGTATCGGGGGTGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HLPFWLKPGSGCCVRSRLAGCKE*VSGVEG Trigger: GCCTTCCACCCCCGATACCCACTCTTTGCATCCGGC...CAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGAGCCACCGGGCAGGCTaGAGAGCTGGCTCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGSHRAG*RAGSSG Trigger: ACCTGAGGAGCCAGCTCTGCAGCCTGCCCGGTGGCT...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGGGTAAATGCGGATGCTaGGCTGGGAGGCCACGAGCA | + |
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Preference number: 4 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKGKCGC*AGRPRA Trigger: TGCTCGTGGCCTCCCAGCGCAGCATCCGCATTTACC...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | AAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGCTGGATGTACAGCCATaGTGGACACCCACTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPGSGCCVRSRLGSCWRLLDVQP*WTPTCS Trigger: ACTGCAAGTGGGTGTCCAGCATGGCTGTACATCCAG...CAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAACCTGAAGCTAGCCACTaGCCCCCTGGCGAGACACTG | + |
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Preference number: 4 (lower is better) Translates to: CKVKAGQLLEAESGRQEEPEASH*PPGETL Trigger: CAGTGTCTCGCCAGGGGGCCAGTGGCTAGCTTCAGG...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | GTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAATAAGGGCCGGGAGGGATaGAAGGCCACACACTGCACC | + |
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Preference number: 4 (lower is better) Translates to: VRSRLGSCWRLNQEDRKNKGREG*KATHCT Trigger: GGTGCAGTGTGTGGCCTTCCATCCCTCCCGGCCCTT...ATTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | GGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACTGGGCATCAGCTTCTTaGTTAGCTCCTGGCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GCCVRSRLGSCWRLNQEDWASAS*LAPGAA Trigger: TGCTGCGCCAGGAGCTAACCAAGAAGCTGATGCCCA...GTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR TCA 90 bp | CAGTGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTCCCCTGGCGAGACACTaGGGCAACGGACAAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: QWVTLYQYHLPFWLKPGSPLARH*GNGQGR Trigger: GCGACCTTGTCCGTTGCCTCAGTGTCTCGCCAGGGG...AGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | CAGTGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTCCAGCAGCTGGTCTGTaGTGCCCACCAGCAGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: QWVTLYQYHLPFWLKPGSPAAGL*CPPAAG Trigger: ACCGGCTGCTGGTGGGCAGCACAGACCAGCTGCTGG...AGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGCCACACACTGCACCTaGCCGTGGCTGCGGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: WCPNLLPNKASYTSVGDIATHCT*PWLRRN Trigger: GTTCCGCCGCAGCCACGGGCAGGTGCAGTGTGTGGC...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAAGCAGCAGGTGGTAAATaGGGATGCTGCGCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CKVKAGQLLEAESGRQEEAAGGK*GCCAGR Trigger: CCTCCCAGCGCAGCATCCGCATTTACCACCTGCTGC...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAAGGCAGGCTGCAGAGCTaGCTCCTCAGGTGGAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: CKVKAGQLLEAESGRQEEGRLQS*LLRWSE Trigger: TTCACTCCACCTGAGGAGCCAGCTCTGCAGCCTGCC...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | CAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGACCCACGGCTGTGTaGGGTGGAAGGCCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: QYHLPFWLKPGSGCCVRSRPTAV*GGRPHP Trigger: TGGATGTGGCCTTCCACCCCACACAGCCGTGGGTCT...TGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTCTCTCCACAGGCTCCTaGTGCATCCACGCCGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: WCPNLLPNKASYTSVGDILSTGS*CIHAER Trigger: GCGCTCGGCGTGGATGCAGCAGGAGCCTGTGGAGAG...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | CTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCACCCTCATCTTGCGTTaGCGTGGGCACAGATACAAA | + |
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Preference number: 4 (lower is better) Translates to: LPFWLKPGSGCCVRSRLGTLILR*RGHRYK Trigger: TTTGTATCTGTGCCCACGGCAACGCAAGATGAGGGT...GCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | CAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAGTTTGCTGTGGCAGATaGGTAGGCGCAGACCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: QYHLPFWLKPGSGCCVRSVCCGR*VGADPS Trigger: AGAGGGGTCTGCGCCTACGCATCTGCCACAGCAAAC...TGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGGAACGGGCTCTGGCTaGGCCTCCTGCTCACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: WCPNLLPNKASYTSVGDIGTGSG*ASCSPG Trigger: ACCAGGTGAGCAGGAGGCGCAGCCAGAGCCCGTTCC...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | AAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGGATGATGTTGTCACCTaGTGGATGTACAGCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: KPGSGCCVRSRLGSCWRLDDVVT*WMYSHA Trigger: AGCATGGCTGTACATCCAGCAGGTGACAACATCATC...CAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGGTCTCCTCTGCCCTATaGTTGTCTTCGTCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKVSSAL*LSSSPL Trigger: CAGCGGTGACGAAGACAACCATAGGGCAGAGGAGAC...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGTATGGAAGGCCACACACTaGACCTGCCCGTGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: CPNLLPNKASYTSVGDIVWKATH*TCPWLR Trigger: CCGCAGCCACGGGCAGGTGCAGTGTGTGGCCTTCCA...TACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | CAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCACGGTTGGTCACAGGGTaGATCATGATGTCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: QYHLPFWLKPGSGCCVRSRLVTG*IMMSPL Trigger: CAGCGGTGACATCATGATCCACCCTGTGACCAACCG...TGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR TCA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTCTCCTGCTCACCTGGTaGAGCAGCACTTGCGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: WCPNLLPNKASYTSVGDILLLTW*SSTCVC Trigger: GCACACGCAAGTGCTGCTTCACCAGGTGAGCAGGAG...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR TCA 90 bp | CAGTGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTAACACTGCCGTCGTCTaGGCCGGATGCAAAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QWVTLYQYHLPFWLKPGSNTAVV*AGCKEW Trigger: CCACTCTTTGCATCCGGCTCAGACGACGGCAGTGTT...AGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | CAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAGAATTCATCGTACCATaGCAGGGGCACATTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QYHLPFWLKPGSGCCVRSEFIVP*QGHIAH Trigger: GTGGGCAATGTGCCCCTGGCATGGTACGATGAATTC...TGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR GCA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAACATTCACCCTCATCTTaGGTTGCCGTGGGCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: CKVKAGQLLEAESGRQEEHSPSS*VAVGTD Trigger: ATCTGTGCCCACGGCAACGCAAGATGAGGGTGAATG...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAAACACGGCATCATCCATaGCAGCAGCTACCAGGCATA | + |
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Preference number: 4 (lower is better) Translates to: CKVKAGQLLEAESGRQEETRHHP*QQLPGI Trigger: TATGCCTGGTAGCTGCTGCCATGGATGATGCCGTGT...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTAAGGCTTCCAGCAGCTaGTCTGTGCTGCCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: WCPNLLPNKASYTSVGDIKASSS*SVLPTS Trigger: GCTGGTGGGCAGCACAGACCAGCTGCTGGAAGCCTT...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGGATGTTGTCACCTGCTaGATGTACAGCCATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKDVVTC*MYSHAG Trigger: TCCAGCATGGCTGTACATCCAGCAGGTGACAACATC...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CCA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGTTGTACACCATGCCATaGCACACGATAACACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKLYTMP*HTITLP Trigger: CGGCAGTGTTATCGTGTGCCATGGCATGGTGTACAA...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR GCA 90 bp | TGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGTAAAGAGGGGCAGCCTGTaGCAGCTCCTCAGAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPNLLPNKASYTSVGDIVKRGSL*QLLRGL Trigger: GAGACCTCTGAGGAGCTGGCACAGGCTGCCCCTCTT...TACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR GCA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGCAAACCACACCAGTTTaGTGTCATAGCTGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKQTTPV*CHSCHR Trigger: TCTGTGGCAGCTATGACAGCAAACTGGTGTGGTTTG...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTTCATACAGCGGGCAGTaGCCACCTCCCAGAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WCPNLLPNKASYTSVGDISYSGQ*PPPRAS Trigger: TGAAGCTCTGGGAGGTGGCCACTGCCCGCTGTATGA...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CCA 90 bp | GACTGTGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGGATGTACAGCCATGCTaGACACCCACTTGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCGAPIYCPIKPVTPQWVDVQPC*TPTCSW Trigger: CCAACTGCAAGTGGGTGTCCAGCATGGCTGTACATC...CACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR TCA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGTATCTGCAGCTCCTaGTCAGGTTCCAAACGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGCICSS*SGSKRR Trigger: ACGACGTTTGGAACCTGATCAGGAGCTGCAGATACA...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR TCA 90 bp | TGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGTATGCTTCCTCTGTCCTTaGGCAAAGAGGGGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPNLLPNKASYTSVGDIVCFLCP*AKRGSL Trigger: CAGGCTGCCCCTCTTTGCTCAAGGACAGAGGAAGCA...TACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR TCA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGCTGGCTCATAGGGATTaGAGCCTGAATCTCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGLAHRD*SLNLRT Trigger: AGTTCGGAGATTCAGGCTTCAATCCCTATGAGCCAG...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR GCA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAATCTTGTCTTGCACAGTaGGCCAGAAATCTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CKVKAGQLLEAESGRQEESCLAQ*ARNLGH Trigger: ATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGA...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGAAGGCCTTCTTGTGGTaGCTCAGCACTTTGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGKAFLW*LSTLYG Trigger: GCCATACAAAGTGCTGAGGCACCACAAGAAGGCCTT...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CCA 90 bp | GACTGTGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGGAAGAAGTCCACAGCTaGCTCATAGGGATTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DCGAPIYCPIKPVTPQWVEEVHS*LIGIEA Trigger: GGCTTCAATCCCTATGAGCCAGCTGTGGACTTCTTC...CACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CCA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGGCACTGTCCTCAAGCTaGGGAATTTCTGTGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGALSSS*GISVAR Trigger: TCTTGCCACAGAAATTCCCCAGCTTGAGGACAGTGC...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CCA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGCGCAAGGCCTTCTTGTaGTGCCTCAGCACTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGRKAFL*CLSTLY Trigger: ATACAAAGTGCTGAGGCACCACAAGAAGGCCTTGCG...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR GCA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTCTCAGAGGTCTCCTCTaGCCTATGGTTGTCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: WCPNLLPNKASYTSVGDILRGLL*PMVVFV Trigger: GACGAAGACAACCATAGGGCAGAGGAGACCTCTGAG...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGCCTGTCATCTTGTCTTaGACAGTGCGCCAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGPVILS*TVRQKS Trigger: AGATTTCTGGCGCACTGTGCAAGACAAGATGACAGG...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CCA 90 bp | GTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAATGCTGGGGAATTTCTGTaGCAAGAAGTTAAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRLGSCWRLNQEDRKNAGEFL*QEVKLP Trigger: AGGAAGCTTAACTTCTTGCCACAGAAATTCCCCAGC...ATTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CCA 90 bp | CATCCACGCCGAGCGCTCCTCCTCAGTGGGCAGGTACTCGGGAGGTaGGTTGTAAGACTCGGCATGGCCAGGCAAGGCCAGCTTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPRRALLLSGQVLGR*VVRLGMARQGQLGG Trigger: GCCCCCAAGCTGGCCTTGCCTGGCCATGCCGAGTCTTACAACCCACCTCCCGAGTACCTGCCCACTGAGGAGGAGCGCTCGGCGTGGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS GCA 90 bp | CCCCTCTGGTGCTCTTCCTCCGAGACCTCTAGCCACCGGGCAGGCTaGAGAGCTGGCTCCTCAGGTGGAGTGAAGGCTTCCAGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLWCSSSETSSHRAG*RAGSSGGVKASSSW Trigger: CCAGCTGCTGGAAGCCTTCACTCCACCTGAGGAGCCAGCTCTGCAGCCTGCCCGGTGGCTAGAGGTCTCGGAGGAAGAGCACCAGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS GCA 90 bp | TGGGCATCAGCTTCTTGGTTAGCTCCTGGCGCAGCAGGTGGTAAATaGGGATGCTGCGCTGGGAGGCCACGAGCAGGAAGGGCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WASASWLAPGAAGGK*GCCAGRPRAGRAGR Trigger: CCTCCCGGCCCTTCCTGCTCGTGGCCTCCCAGCGCAGCATCCGCATTTACCACCTGCTGCGCCAGGAGCTAACCAAGAAGCTGATGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS TCA 90 bp | CATCGTCTGAACCTGAAGCTAGCCACTGGCCCCCTGGCGAGACACTaGGGCAACGGACAAGGTCGCTGTGGCCCCTGTAGACGAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRLNLKLATGPLARH*GNGQGRCGPCRRGP Trigger: AGGCCCTCGTCTACAGGGGCCACAGCGACCTTGTCCGTTGCCTCAGTGTCTCGCCAGGGGGCCAGTGGCTAGCTTCAGGTTCAGACGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS GCA 90 bp | GTCACTGGTTTGCTGTGGCAGATGCGTAGGCGCAGACCCCTCTGGTaGTCTTCCTCCGAGACCTCTAGCCACCGGGCAGGCTGCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTGLLWQMRRRRPLW*SSSETSSHRAGCRA Trigger: AGCTCTGCAGCCTGCCCGGTGGCTAGAGGTCTCGGAGGAAGAGCACCAGAGGGGTCTGCGCCTACGCATCTGCCACAGCAAACCAGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | GCATGGCCAGGCAAGGCCAGCTTGGGGGCAGGCACATGCATCTTGTaGCGTCCCAACACAGCATTCGGATCCTCCTGGGCCCACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWPGKASLGAGTCIL*RPNTAFGSSWAHRS Trigger: TGACCTGTGGGCCCAGGAGGATCCGAATGCTGTGTTGGGACGCCACAAGATGCATGTGCCTGCCCCCAAGCTGGCCTTGCCTGGCCATGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CCA 90 bp | GTCGAATGGTGCCATCTGCCCCGGAGGAGAAGACCCACGGCTGTGTaGGGTGGAAGGCCACATCCAGAACACCCAGATCTCGGGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VEWCHLPRRRRPTAV*GGRPHPEHPDLGSG Trigger: CCCTGACCCGAGATCTGGGTGTTCTGGATGTGGCCTTCCACCCCACACAGCCGTGGGTCTTCTCCTCCGGGGCAGATGGCACCATTCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | CGGGAGGTGGGTTGTAAGACTCGGCATGGCCAGGCAAGGCCAGCTTaGGGGCAGGCACATGCATCTTGTGGCGTCCCAACACAGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: REVGCKTRHGQARPA*GQAHASCGVPTQHS Trigger: CGAATGCTGTGTTGGGACGCCACAAGATGCATGTGCCTGCCCCCAAGCTGGCCTTGCCTGGCCATGCCGAGTCTTACAACCCACCTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | TGTGTCACTGGTTTGCTGTGGCAGATGCGTAGGCGCAGACCCCTCTaGTGCTCTTCCTCCGAGACCTCTAGCCACCGGGCAGGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CVTGLLWQMRRRRPL*CSSSETSSHRAGCR Trigger: TCTGCAGCCTGCCCGGTGGCTAGAGGTCTCGGAGGAAGAGCACCAGAGGGGTCTGCGCCTACGCATCTGCCACAGCAAACCAGTGACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | ACACTGCCGTCGTCTGAGCCGGATGCAAAGAGTGGGTATCGGGGGTaGAAGGCCACAGCCCGCAAGGCCTTCTTGTGGTGCCTCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TLPSSEPDAKSGYRG*KATARKAFLWCLST Trigger: AGTGCTGAGGCACCACAAGAAGGCCTTGCGGGCTGTGGCCTTCCACCCCCGATACCCACTCTTTGCATCCGGCTCAGACGACGGCAGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 90 bp | CTCGCCCATGCCAGGTCACCTGTGTCACTGGTTTGCTGTGGCAGATaGGTAGGCGCAGACCCCTCTGGTGCTCTTCCTCCGAGACCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LAHARSPVSLVCCGR*VGADPSGALPPRPL Trigger: TAGAGGTCTCGGAGGAAGAGCACCAGAGGGGTCTGCGCCTACGCATCTGCCACAGCAAACCAGTGACACAGGTGACCTGGCATGGGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | AGAGGGGCAGCCTGTGCCAGCTCCTCAGAGGTCTCCTCTGCCCTATaGTTGTCTTCGTCACCGCTGGATCCGGCCACTCCTTCAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGAACASSSEVSSAL*LSSSPLDPATPSVS Trigger: AGACACTGAAGGAGTGGCCGGATCCAGCGGTGACGAAGACAACCATAGGGCAGAGGAGACCTCTGAGGAGCTGGCACAGGCTGCCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | TCCCAGAGCTTCAACGTGCCATCGTCTGAACCTGAAGCTAGCCACTaGCCCCCTGGCGAGACACTGAGGCAACGGACAAGGTCGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSFNVPSSEPEASH*PPGETLRQRTRSLW Trigger: CCACAGCGACCTTGTCCGTTGCCTCAGTGTCTCGCCAGGGGGCCAGTGGCTAGCTTCAGGTTCAGACGATGGCACGTTGAAGCTCTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | CCTGTAGACGAGGGCCTGGCACACAGGGAAAGGCTGAAGGTCTCTTaGCCGAGGGAGTTTGGGGATGAGGTCTTCGGGGTCCACATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVDEGLAHRERLKVS*PREFGDEVFGVHIH Trigger: GTGAATGTGGACCCCGAAGACCTCATCCCCAAACTCCCTCGGCCAAGAGACCTTCAGCCTTTCCCTGTGTGCCAGGCCCTCGTCTACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 90 bp | GAGTCAGGATCGCTGAGGAGAGGAGGCTCTTGTATCTGCAGCTCCTaGTCAGGTTCCAAACGTCGTTTCCCCGGCAGCGATGCCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ESGSLRRGGSCICSS*SGSKRRFPGSDAGD Trigger: GTCACCGGCATCGCTGCCGGGGAAACGACGTTTGGAACCTGATCAGGAGCTGCAGATACAAGAGCCTCCTCTCCTCAGCGATCCTGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 90 bp | GGGAATTTCTGTGGCAAGAAGTTAAGCTTCCTCTCCACAGGCTCCTaGTGCATCCACGCCGAGCGCTCCTCCTCAGTGGGCAGGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: GNFCGKKLSFLSTGS*CIHAERSSSVGRYS Trigger: CGAGTACCTGCCCACTGAGGAGGAGCGCTCGGCGTGGATGCAGCAGGAGCCTGTGGAGAGGAAGCTTAACTTCTTGCCACAGAAATTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | GCTCCTCAGAGGTCTCCTCTGCCCTATGGTTGTCTTCGTCACCGCTaGATCCGGCCACTCCTTCAGTGTCTTCCTCACTCGAGTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: APQRSPLPYGCLRHR*IRPLLQCLPHSSHC Trigger: GCAGTGACTCGAGTGAGGAAGACACTGAAGGAGTGGCCGGATCCAGCGGTGACGAAGACAACCATAGGGCAGAGGAGACCTCTGAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGTTGTCAGCTGGGCGGTaGGTCACAGGGTGGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: KPGSGCCVRSRLGSCWRLLSAGR*VTGWIM Trigger: CATGATCCACCCTGTGACCAACCGCCCAGCTGACAA...CAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 90 bp | ACACAGGGAAAGGCTGAAGGTCTCTTGGCCGAGGGAGTTTGGGGATaGGGTCTTCGGGGTCCACATTCACCCTCATCTTGCGTTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TQGKAEGLLAEGVWG*GLRGPHSPSSCVAV Trigger: CACGGCAACGCAAGATGAGGGTGAATGTGGACCCCGAAGACCTCATCCCCAAACTCCCTCGGCCAAGAGACCTTCAGCCTTTCCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 90 bp | GTCATTGTACACCATGCCATGGCACACGATAACACTGCCGTCGTCTaGGCCGGATGCAAAGAGTGGGTATCGGGGGTGGAAGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VIVHHAMAHDNTAVV*AGCKEWVSGVEGHS Trigger: GCTGTGGCCTTCCACCCCCGATACCCACTCTTTGCATCCGGCTCAGACGACGGCAGTGTTATCGTGTGCCATGGCATGGTGTACAATGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 90 bp | AATTTCTGTGGCAAGAAGTTAAGCTTCCTCTCCACAGGCTCCTGCTaGATCCACGCCGAGCGCTCCTCCTCAGTGGGCAGGTACTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NFCGKKLSFLSTGSC*IHAERSSSVGRYSG Trigger: TCCCGAGTACCTGCCCACTGAGGAGGAGCGCTCGGCGTGGATGCAGCAGGAGCCTGTGGAGAGGAAGCTTAACTTCTTGCCACAGAAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACCTGCTTCCTCTGTCCTaGAGCAAAGAGGGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCCVRSRLGSCWRLNQEDLLPLS*SKEGQP Trigger: AGGCTGCCCCTCTTTGCTCAAGGACAGAGGAAGCAG...GTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGGGCCACTTGCGTGTGCTCTaGACTAGACAGCACCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LPFWLKPGSGCCVRSRLGHLRVL*TRQHHR Trigger: GCGGTGGTGCTGTCTAGTCAAGAGCACACGCAAGTG...GCCCAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS TCA 90 bp | CTCTTCATATTCATCTTGGGCCAGAGCACCTGCTTCCTCTGTCCTTaGGCAAAGAGGGGCAGCCTGTGCCAGCTCCTCAGAGGTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFIFILGQSTCFLCP*AKRGSLCQLLRGLL Trigger: GAGGAGACCTCTGAGGAGCTGGCACAGGCTGCCCCTCTTTGCTCAAGGACAGAGGAAGCAGGTGCTCTGGCCCAAGATGAATATGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS TCA 90 bp | GTCACCGCTGAAGAAGTCCACAGCTGGCTCATAGGGATTGAAGCCTaGATCTCCGAACTGGCCTCTCTGAAGCCGGTGTACCAGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VTAEEVHSWLIGIEA*ISELASLKPVYQGN Trigger: GTTGCCCTGGTACACCGGCTTCAGAGAGGCCAGTTCGGAGATTCAGGCTTCAATCCCTATGAGCCAGCTGTGGACTTCTTCAGCGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS GCA 90 bp | CGCTGGATCCGGCCACTCCTTCAGTGTCTTCCTCACTCGAGTCACTaGCCAAATCTTCGAGGCCTGAAAACACACTCTCCTCGCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RWIRPLLQCLPHSSH*PNLRGLKTHSPRCQ Trigger: CTGACAGCGAGGAGAGTGTGTTTTCAGGCCTCGAAGATTTGGGCAGTGACTCGAGTGAGGAAGACACTGAAGGAGTGGCCGGATCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CCA 90 bp | GATGAGGTCTTCGGGGTCCACATTCACCCTCATCTTGCGTTGCCGTaGGCACAGATACAAATCGAGGCAGCGCTCGAAACGCTCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DEVFGVHIHPHLALP*AQIQIEAALETLLD Trigger: ATCCAGGAGCGTTTCGAGCGCTGCCTCGATTTGTATCTGTGCCCACGGCAACGCAAGATGAGGGTGAATGTGGACCCCGAAGACCTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CCA 90 bp | TCCGCACCACACCTCCAACATGTACAGTCTTCATACAGCGGGCAGTaGCCACCTCCCAGAGCTTCAACGTGCCATCGTCTGAACCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAPHLQHVQSSYSGQ*PPPRASTCHRLNLK Trigger: CTTCAGGTTCAGACGATGGCACGTTGAAGCTCTGGGAGGTGGCCACTGCCCGCTGTATGAAGACTGTACATGTTGGAGGTGTGGTGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGCCAGGCAAGGCCAGCTaGGGGGCAGGCACATGCATC | + |
|
Preference number: 5 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGPGKAS*GAGTCI Trigger: GATGCATGTGCCTGCCCCCAAGCTGGCCTTGCCTGG...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS TCA 90 bp | GTGGGCACAGATACAAATCGAGGCAGCGCTCGAAACGCTCCTGGATaGAGCGGCTGTAAGCAGGCACTGTCCTCAAGCTGGGGAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGTDTNRGSARNAPG*SGCKQALSSSWGIS Trigger: AGAAATTCCCCAGCTTGAGGACAGTGCCTGCTTACAGCCGCTTCATCCAGGAGCGTTTCGAGCGCTGCCTCGATTTGTATCTGTGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGTCACGCCCTGTCATCTaGTCTTGCACAGTGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKSRPVI*SCTVRQ Trigger: CTGGCGCACTGTGCAAGACAAGATGACAGGGCGTGA...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGGCAGGCACATGCATCTaGTGGCGTCCCAACACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKAGTCI*WRPNTA Trigger: TGCTGTGTTGGGACGCCACAAGATGCATGTGCCTGC...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | GACTGTGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGCTTGGCCGAGGGAGTTaGGGGATGAGGTCTTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DCGAPIYCPIKPVTPQWVLGRGS*GMRSSG Trigger: CCCCGAAGACCTCATCCCCAAACTCCCTCGGCCAAG...CACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAAGGGATGAAACTACGCTaGTCAGCTGGGCGGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CKVKAGQLLEAESGRQEEGMKLR*SAGRLV Trigger: GACCAACCGCCCAGCTGACAAGCGTAGTTTCATCCC...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGTGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGACCTGTGTCACTGGTTaGCTGTGGCAGATGCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVRSRLGSCWRLNQEDRKTCVTG*LWQMRR Trigger: CCTACGCATCTGCCACAGCAAACCAGTGACACAGGT...CTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | CACCAGTTTGCTGTCATAGCTGCCACAGATGATGTTGTCACCTGCTaGATGTACAGCCATGCTGGACACCCACTTGCAGTTGGGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQFAVIAATDDVVTC*MYSHAGHPLAVGHQ Trigger: CTGATGCCCAACTGCAAGTGGGTGTCCAGCATGGCTGTACATCCAGCAGGTGACAACATCATCTGTGGCAGCTATGACAGCAAACTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | CACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGCTCTTCATATTCATCTaGGGCCAGAGCACCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLPFWLKPGSGCCVRSRLLFIFI*GQSTCF Trigger: GAAGCAGGTGCTCTGGCCCAAGATGAATATGAAGAG...CAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGAAGGCTGAAGGTCTCTaGGCCGAGGGAGTTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGKAEGL*AEGVWG Trigger: TCCCCAAACTCCCTCGGCCAAGAGACCTTCAGCCTT...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAAATGCTGGACACCCACTaGCAGTTGGGCATCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CKVKAGQLLEAESGRQEEMLDTH*QLGISF Trigger: GAAGCTGATGCCCAACTGCAAGTGGGTGTCCAGCAT...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CAA 90 bp | CACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGCTGCCACAGATGATGTaGTCACCTGCTGGATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: HLPFWLKPGSGCCVRSRLLPQMM*SPAGCT Trigger: TGTACATCCAGCAGGTGACAACATCATCTGTGGCAG...CAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS TCA 90 bp | TTCAGTGTCTTCCTCACTCGAGTCACTGCCCAAATCTTCGAGGCCTaGAAACACACTCTCCTCGCTGTCAGAGAGACTGGAGTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: FSVFLTRVTAQIFEA*KHTLLAVRETGVRI Trigger: GATCCTGACTCCAGTCTCTCTGACAGCGAGGAGAGTGTGTTTTCAGGCCTCGAAGATTTGGGCAGTGACTCGAGTGAGGAAGACACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS GCA 90 bp | CATAACCCACATGTGGGAATTCATCGTACCATGCCAGGGGCACATTaGCCACAGTGTTCCGAATGTCCTCCTCATCAGAGCTGTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HNPHVGIHRTMPGAH*PQCSECPPHQSCPL Trigger: AAGAGGACAGCTCTGATGAGGAGGACATTCGGAACACTGTGGGCAATGTGCCCCTGGCATGGTACGATGAATTCCCACATGTGGGTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 90 bp | ACTGGTCGAGCTCATCTCGTGTCCGCAGGGGCTTGTAGATACGTTTaGCATCCAGGTCATAACCCACATGTGGGAATTCATCGTACCATG | + |
|
Preference number: 5 (lower is better) Translates to: TGRAHLVSAGACRYV*HPGHNPHVGIHRTM Trigger: CATGGTACGATGAATTCCCACATGTGGGTTATGACCTGGATGGCAAACGTATCTACAAGCCCCTGCGGACACGAGATGAGCTCGACCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CCA 90 bp | CAGGGGCTTGTAGATACGTTTGCCATCCAGGTCATAACCCACATGTaGGAATTCATCGTACCATGCCAGGGGCACATTGCCCACAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QGLVDTFAIQVITHM*EFIVPCQGHIAHSV Trigger: AACACTGTGGGCAATGTGCCCCTGGCATGGTACGATGAATTCCCACATGTGGGTTATGACCTGGATGGCAAACGTATCTACAAGCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGACATTCACCCTCATCTaGCGTTGCCGTGGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGTFTLI*RCRGHR Trigger: TCTGTGCCCACGGCAACGCAAGATGAGGGTGAATGT...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS-3UTR CAA 90 bp | CACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTGCTGTGTAAGGTCAAGGCTGAGCACTTTGTATGGCTaGGTGGAAAGATCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLPFWLKPGSGCCVRSRLSTLYG*VERSRS Trigger: TGACCTGGATCTTTCCACCAAGCCATACAAAGTGCT...CAGCCTTGACCTTACACAGCACCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 90 bp | CATGTACCATTCGAGACACCTTCTCCTTTTCAACTAGGGATGGGATaGAACTACGCTTGTCAGCTGGGCGGTTGGTCACAGGGTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: HVPFETPSPFQLGMG*NYACQLGGWSQGGS Trigger: TGATCCACCCTGTGACCAACCGCCCAGCTGACAAGCGTAGTTTCATCCCATCCCTAGTTGAAAAGGAGAAGGTGTCTCGAATGGTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 90 bp | CATCAGTTAGCCGCAGATCACGCCCTGTCATCTTGTCTTGCACAGTaGGCCAGAAATCTGGGTCATCCATTTTGTCCAGAAACTGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HQLAADHALSSCLAQ*ARNLGHPFCPETGR Trigger: TCGACCAGTTTCTGGACAAAATGGATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGATGACAGGGCGTGATCTGCGGCTAACTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS GCA 90 bp | ACCTGCTCATCAGTTAGCCGCAGATCACGCCCTGTCATCTTGTCTTaGACAGTGCGCCAGAAATCTGGGTCATCCATTTTGTCCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TCSSVSRRSRPVILS*TVRQKSGSSILSRN Trigger: GTTTCTGGACAAAATGGATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGATGACAGGGCGTGATCTGCGGCTAACTGATGAGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 90 bp | CAGATCACGCCCTGTCATCTTGTCTTGCACAGTGCGCCAGAAATCTaGGTCATCCATTTTGTCCAGAAACTGGTCGAGCTCATCTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QITPCHLVLHSAPEI*VIHFVQKLVELISC Trigger: ACACGAGATGAGCTCGACCAGTTTCTGGACAAAATGGATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGATGACAGGGCGTGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGTATGGGGCCGTCGAGGCTaGATCCACCCCATCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CPNLLPNKASYTSVGDIVWGRRG*IHPILM Trigger: CATCAAGATGGGGTGGATCAAGCCTCGACGGCCCCA...TACAATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGTAAGGTCAAGGCTGGGCAGTTGCTGGAGGCTGAATCAGGAAGACAGGAAGAATGGTGCCTCAGCACTTaGTATGGCTTGGTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CKVKAGQLLEAESGRQEEWCLST*YGLVER Trigger: TCTTTCCACCAAGCCATACAAAGTGCTGAGGCACCA...TTCTTCCTGTCTTCCTGATTCAGCCTCCAGCAACTGCCCAGCCTTGACCTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTGAGGAGAGGAGGCTCTaGTATCTGCAGCTCCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: WCPNLLPNKASYTSVGDIEERRL*YLQLLI Trigger: GATCAGGAGCTGCAGATACAAGAGCCTCCTCTCCTC...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGGGTGACATTGTATCAATACCACCTTCCCTTCTGGCTTAAGCCAGGTTCTGGGTCTGGGTCATCCATTTaGTCCAGAAACTGGTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVTLYQYHLPFWLKPGSGSGSSI*SRNWSS Trigger: GCTCGACCAGTTTCTGGACAAAATGGATGACCCAGA...CCCAGAACCTGGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS-3UTR CAA 90 bp | TGGTGCCCCAATTTATTGCCCAATAAAGCCAGTTACACCTCAGTGGGTGACATTCACCCTCATCTTGCGTaGCCGTGGGCACAGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: WCPNLLPNKASYTSVGDIHPHLA*PWAQIQ Trigger: TTGTATCTGTGCCCACGGCAACGCAAGATGAGGGTG...AATGTCACCCACTGAGGTGTAACTGGCTTTATTGGGCAATAAATTGGGGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | CGTGGCTGCGGCGGAACGGGCTCTGGCTGCGCCTCCTaGTCACCTGGTGAAGCAGCACTTGCGTGTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGCGGTGSGCAS*SPGEAALACAL Trigger: AAGAGCACACGCAAGTGCTGCTTCACCAGGTGAGCAGGAGGCGCAGCCAGAGCCCGTTCCGCCGCAGCCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | TGGTTAGCTCCTGGCGCAGCAGGTGGTAAATGCGGATaGTGCGCTGGGAGGCCACGAGCAGGAAGGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLAPGAAGGKCG*CAGRPRAGRAG Trigger: CCCGGCCCTTCCTGCTCGTGGCCTCCCAGCGCAGCATCCGCATTTACCACCTGCTGCGCCAGGAGCTAACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | TTGCTGTGGCAGATGCGTAGGCGCAGACCCCTCTGGTaGTCTTCCTCCGAGACCTCTAGCCACCGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLWQMRRRRPLW*SSSETSSHRAG Trigger: GCCTGCCCGGTGGCTAGAGGTCTCGGAGGAAGAGCACCAGAGGGGTCTGCGCCTACGCATCTGCCACAGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 90 bp | TCGGCATGGCCAGGCAAGGCCAGCTTGGGGGCAGGCACATGCATCTaGTGGCGTCCCAACACAGCATTCGGATCCTCCTGGGCCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAWPGKASLGAGTCI*WRPNTAFGSSWAHR Trigger: CCTGTGGGCCCAGGAGGATCCGAATGCTGTGTTGGGACGCCACAAGATGCATGTGCCTGCCCCCAAGCTGGCCTTGCCTGGCCATGCCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | AGGGGCAGCCTGTGCCAGCTCCTCAGAGGTCTCCTCTaGCCTATGGTTGTCTTCGTCACCGCTGGATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGSLCQLLRGLL*PMVVFVTAGSG Trigger: GCCGGATCCAGCGGTGACGAAGACAACCATAGGGCAGAGGAGACCTCTGAGGAGCTGGCACAGGCTGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | CCCCTCGCCCATGCCAGGTCACCTGTGTCACTGGTTTaGTGTGGCAGATGCGTAGGCGCAGACCCCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLAHARSPVSLV*CGRCVGADPSG Trigger: ACCAGAGGGGTCTGCGCCTACGCATCTGCCACAGCAAACCAGTGACACAGGTGACCTGGCATGGGCGAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | GGCAAGGCCAGCTTGGGGGCAGGCACATGCATCTTGTaGCGTCCCAACACAGCATTCGGATCCTCCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GKASLGAGTCIL*RPNTAFGSSWA Trigger: GGCCCAGGAGGATCCGAATGCTGTGTTGGGACGCCACAAGATGCATGTGCCTGCCCCCAAGCTGGCCTTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | GGTTTGCTGTGGCAGATGCGTAGGCGCAGACCCCTCTaGTGCTCTTCCTCCGAGACCTCTAGCCACCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLLWQMRRRRPL*CSSSETSSHRA Trigger: TGCCCGGTGGCTAGAGGTCTCGGAGGAAGAGCACCAGAGGGGTCTGCGCCTACGCATCTGCCACAGCAAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 90 bp | GGGGCAGCCTGTGCCAGCTCCTCAGAGGTCTCCTCTGCCCTATGGTaGTCTTCGTCACCGCTGGATCCGGCCACTCCTTCAGTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GAACASSSEVSSALW*SSSPLDPATPSVSS Trigger: GGAAGACACTGAAGGAGTGGCCGGATCCAGCGGTGACGAAGACAACCATAGGGCAGAGGAGACCTCTGAGGAGCTGGCACAGGCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 72 bp | AACCTGAAGCTAGCCACTGGCCCCCTGGCGAGACACTaGGGCAACGGACAAGGTCGCTGTGGCCCCTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: NLKLATGPLARH*GNGQGRCGPCR Trigger: TCTACAGGGGCCACAGCGACCTTGTCCGTTGCCTCAGTGTCTCGCCAGGGGGCCAGTGGCTAGCTTCAGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | GGCAAGAAGTTAAGCTTCCTCTCCACAGGCTCCTGCTaGATCCACGCCGAGCGCTCCTCCTCAGTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GKKLSFLSTGSC*IHAERSSSVGR Trigger: CCTGCCCACTGAGGAGGAGCGCTCGGCGTGGATGCAGCAGGAGCCTGTGGAGAGGAAGCTTAACTTCTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | TACAGCGGGCAGTGGCCACCTCCCAGAGCTTCAACGTaGCATCGTCTGAACCTGAAGCTAGCCACTGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: YSGQWPPPRAST*HRLNLKLATGP Trigger: GGGGCCAGTGGCTAGCTTCAGGTTCAGACGATGGCACGTTGAAGCTCTGGGAGGTGGCCACTGCCCGCTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | CGCCCATGCCAGGTCACCTGTGTCACTGGTTTGCTGTaGCAGATGCGTAGGCGCAGACCCCTCTGGTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPCQVTCVTGLL*QMRRRRPLWCS Trigger: AGAGCACCAGAGGGGTCTGCGCCTACGCATCTGCCACAGCAAACCAGTGACACAGGTGACCTGGCATGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | TGCCATCTGCCCCGGAGGAGAAGACCCACGGCTGTGTaGGGTGGAAGGCCACATCCAGAACACCCAGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: CHLPRRRRPTAV*GGRPHPEHPDL Trigger: GAGATCTGGGTGTTCTGGATGTGGCCTTCCACCCCACACAGCCGTGGGTCTTCTCCTCCGGGGCAGATGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 90 bp | GAACGGGCTCTGGCTGCGCCTCCTGCTCACCTGGTGAAGCAGCACTaGCGTGTGCTCTTGACTAGACAGCACCACCGCCAAATAGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ERALAAPPAHLVKQH*RVLLTRQHHRQIVP Trigger: GGGGACTATTTGGCGGTGGTGCTGTCTAGTCAAGAGCACACGCAAGTGCTGCTTCACCAGGTGAGCAGGAGGCGCAGCCAGAGCCCGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CCA 72 bp | TTCAACGTGCCATCGTCTGAACCTGAAGCTAGCCACTaGCCCCCTGGCGAGACACTGAGGCAACGGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FNVPSSEPEASH*PPGETLRQRTR Trigger: CCTTGTCCGTTGCCTCAGTGTCTCGCCAGGGGGCCAGTGGCTAGCTTCAGGTTCAGACGATGGCACGTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS TCA 72 bp | TTCATCTTGGGCCAGAGCACCTGCTTCCTCTGTCCTTaGGCAAAGAGGGGCAGCCTGTGCCAGCTCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FILGQSTCFLCP*AKRGSLCQLLR Trigger: TCTGAGGAGCTGGCACAGGCTGCCCCTCTTTGCTCAAGGACAGAGGAAGCAGGTGCTCTGGCCCAAGATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS TCA 72 bp | CACCATGCCATGGCACACGATAACACTGCCGTCGTCTaGGCCGGATGCAAAGAGTGGGTATCGGGGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HHAMAHDNTAVV*AGCKEWVSGVE Trigger: TTCCACCCCCGATACCCACTCTTTGCATCCGGCTCAGACGACGGCAGTGTTATCGTGTGCCATGGCATGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS GCA 72 bp | AGGTCTTCGGGGTCCACATTCACCCTCATCTTGCGTTaGCGTGGGCACAGATACAAATCGAGGCAGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RSSGSTFTLILR*RGHRYKSRQRS Trigger: CGAGCGCTGCCTCGATTTGTATCTGTGCCCACGGCAACGCAAGATGAGGGTGAATGTGGACCCCGAAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CCA 72 bp | AGGTCTCCTCTGCCCTATGGTTGTCTTCGTCACCGCTaGATCCGGCCACTCCTTCAGTGTCTTCCTCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: RSPLPYGCLRHR*IRPLLQCLPHS Trigger: CGAGTGAGGAAGACACTGAAGGAGTGGCCGGATCCAGCGGTGACGAAGACAACCATAGGGCAGAGGAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CAA 72 bp | GAGGTCTTCGGGGTCCACATTCACCCTCATCTTGCGTaGCCGTGGGCACAGATACAAATCGAGGCAGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EVFGVHIHPHLA*PWAQIQIEAAL Trigger: GAGCGCTGCCTCGATTTGTATCTGTGCCCACGGCAACGCAAGATGAGGGTGAATGTGGACCCCGAAGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CAA 72 bp | TCATCCATGGCAGCAGCTACCAGGCATATGGTAGGATaGGGGTTCCAGGCGATGCTCCGCACCACACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSMAAATRHMVG*GFQAMLRTTPP Trigger: TGGAGGTGTGGTGCGGAGCATCGCCTGGAACCCCAATCCTACCATATGCCTGGTAGCTGCTGCCATGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
||
| CDS CAA 90 bp | GCTGTCAGAGAGACTGGAGTCAGGATCGCTGAGGAGAGGAGGCTCTaGTATCTGCAGCTCCTGATCAGGTTCCAAACGTCGTTTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: AVRETGVRIAEERRL*YLQLLIRFQTSFPR Trigger: CCGGGGAAACGACGTTTGGAACCTGATCAGGAGCTGCAGATACAAGAGCCTCCTCTCCTCAGCGATCCTGACTCCAGTCTCTCTGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 72 bp | GATACAAATCGAGGCAGCGCTCGAAACGCTCCTGGATaGAGCGGCTGTAAGCAGGCACTGTCCTCAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DTNRGSARNAPG*SGCKQALSSSW Trigger: CCAGCTTGAGGACAGTGCCTGCTTACAGCCGCTTCATCCAGGAGCGTTTCGAGCGCTGCCTCGATTTGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | TTCGGGGTCCACATTCACCCTCATCTTGCGTTGCCGTaGGCACAGATACAAATCGAGGCAGCGCTCGAAACG | + |
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Preference number: 6 (lower is better) Translates to: FGVHIHPHLALP*AQIQIEAALET Trigger: CGTTTCGAGCGCTGCCTCGATTTGTATCTGTGCCCACGGCAACGCAAGATGAGGGTGAATGTGGACCCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | CCTTTCAGCACCTTGACAGGCACCAGCAATGGGTTCTaGAGCAGGTCATTGTACACCATGCCATGGCACACG | + |
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Preference number: 6 (lower is better) Translates to: PFSTLTGTSNGF*SRSLYTMPWHT Trigger: CGTGTGCCATGGCATGGTGTACAATGACCTGCTGCAGAACCCATTGCTGGTGCCTGTCAAGGTGCTGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 72 bp | GAGACTGGAGTCAGGATCGCTGAGGAGAGGAGGCTCTaGTATCTGCAGCTCCTGATCAGGTTCCAAACGTCG | + |
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Preference number: 6 (lower is better) Translates to: ETGVRIAEERRL*YLQLLIRFQTS Trigger: CGACGTTTGGAACCTGATCAGGAGCTGCAGATACAAGAGCCTCCTCTCCTCAGCGATCCTGACTCCAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 72 bp | AGGGATGGGATGAAACTACGCTTGTCAGCTGGGCGGTaGGTCACAGGGTGGATCATGATGTCACCGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RDGMKLRLSAGR*VTGWIMMSPLK Trigger: CTTCAGCGGTGACATCATGATCCACCCTGTGACCAACCGCCCAGCTGACAAGCGTAGTTTCATCCCATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 72 bp | GAAGAAGTCCACAGCTGGCTCATAGGGATTGAAGCCTaGATCTCCGAACTGGCCTCTCTGAAGCCGGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: EEVHSWLIGIEA*ISELASLKPVY Trigger: GTACACCGGCTTCAGAGAGGCCAGTTCGGAGATTCAGGCTTCAATCCCTATGAGCCAGCTGTGGACTTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | CGGCCACTCCTTCAGTGTCTTCCTCACTCGAGTCACTaGCCAAATCTTCGAGGCCTGAAAACACACTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RPLLQCLPHSSH*PNLRGLKTHSP Trigger: AGGAGAGTGTGTTTTCAGGCCTCGAAGATTTGGGCAGTGACTCGAGTGAGGAAGACACTGAAGGAGTGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | CATGTGGGAATTCATCGTACCATGCCAGGGGCACATTaGCCACAGTGTTCCGAATGTCCTCCTCATCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: HVGIHRTMPGAH*PQCSECPPHQS Trigger: GCTCTGATGAGGAGGACATTCGGAACACTGTGGGCAATGTGCCCCTGGCATGGTACGATGAATTCCCACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | AAACTACGCTTGTCAGCTGGGCGGTTGGTCACAGGGTaGATCATGATGTCACCGCTGAAGAAGTCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: KLRLSAGRLVTG*IMMSPLKKSTA Trigger: AGCTGTGGACTTCTTCAGCGGTGACATCATGATCCACCCTGTGACCAACCGCCCAGCTGACAAGCGTAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | AATGGGTTCTGCAGCAGGTCATTGTACACCATGCCATaGCACACGATAACACTGCCGTCGTCTGAGCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: NGFCSRSLYTMP*HTITLPSSEPD Trigger: ATCCGGCTCAGACGACGGCAGTGTTATCGTGTGCCATGGCATGGTGTACAATGACCTGCTGCAGAACCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 72 bp | TGCTCATCAGTTAGCCGCAGATCACGCCCTGTCATCTaGTCTTGCACAGTGCGCCAGAAATCTGGGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: CSSVSRRSRPVI*SCTVRQKSGSS Trigger: GGATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGATGACAGGGCGTGATCTGCGGCTAACTGATGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 90 bp | GTCATCTTGTCTTGCACAGTGCGCCAGAAATCTGGGTCATCCATTTaGTCCAGAAACTGGTCGAGCTCATCTCGTGTCCGCAGGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VILSCTVRQKSGSSI*SRNWSSSSRVRRGL Trigger: CAAGCCCCTGCGGACACGAGATGAGCTCGACCAGTTTCTGGACAAAATGGATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 90 bp | AGGGCAACCTGCTCATCAGTTAGCCGCAGATCACGCCCTGTCATCTaGTCTTGCACAGTGCGCCAGAAATCTGGGTCATCCATTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RATCSSVSRRSRPVI*SCTVRQKSGSSILS Trigger: GGACAAAATGGATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGATGACAGGGCGTGATCTGCGGCTAACTGATGAGCAGGTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 90 bp | CGAGACACCTTCTCCTTTTCAACTAGGGATGGGATGAAACTACGCTaGTCAGCTGGGCGGTTGGTCACAGGGTGGATCATGATGTCACCG | + |
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Preference number: 6 (lower is better) Translates to: RDTFSFSTRDGMKLR*SAGRLVTGWIMMSP Trigger: CGGTGACATCATGATCCACCCTGTGACCAACCGCCCAGCTGACAAGCGTAGTTTCATCCCATCCCTAGTTGAAAAGGAGAAGGTGTCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 72 bp | TTCCTCACTCGAGTCACTGCCCAAATCTTCGAGGCCTaGAAACACACTCTCCTCGCTGTCAGAGAGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: FLTRVTAQIFEA*KHTLLAVRETG Trigger: TCCAGTCTCTCTGACAGCGAGGAGAGTGTGTTTTCAGGCCTCGAAGATTTGGGCAGTGACTCGAGTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | CAGGTCATAACCCACATGTGGGAATTCATCGTACCATaGCAGGGGCACATTGCCCACAGTGTTCCGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: QVITHMWEFIVP*QGHIAHSVPNV Trigger: GACATTCGGAACACTGTGGGCAATGTGCCCCTGGCATGGTACGATGAATTCCCACATGTGGGTTATGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | GCCGCAGATCACGCCCTGTCATCTTGTCTTGCACAGTaGGCCAGAAATCTGGGTCATCCATTTTGTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: AADHALSSCLAQ*ARNLGHPFCPE Trigger: TTCTGGACAAAATGGATGACCCAGATTTCTGGCGCACTGTGCAAGACAAGATGACAGGGCGTGATCTGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | GTAAGCAGGCACTGTCCTCAAGCTGGGGAATTTCTGTaGCAAGAAGTTAAGCTTCCTCTCCACAGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSRHCPQAGEFL*QEVKLPLHRLL Trigger: CAGGAGCCTGTGGAGAGGAAGCTTAACTTCTTGCCACAGAAATTCCCCAGCTTGAGGACAGTGCCTGCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | GCTGTCATAGCTGCCACAGATGATGTTGTCACCTGCTaGATGTACAGCCATGCTGGACACCCACTTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: AVIAATDDVVTC*MYSHAGHPLAV Trigger: AACTGCAAGTGGGTGTCCAGCATGGCTGTACATCCAGCAGGTGACAACATCATCTGTGGCAGCTATGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 72 bp | ACATGTGGGAATTCATCGTACCATGCCAGGGGCACATaGCCCACAGTGTTCCGAATGTCCTCCTCATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TCGNSSYHARGT*PTVFRMSSSSE Trigger: CTCTGATGAGGAGGACATTCGGAACACTGTGGGCAATGTGCCCCTGGCATGGTACGATGAATTCCCACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 90 bp | TTTTCAACTAGGGATGGGATGAAACTACGCTTGTCAGCTGGGCGGTaGGTCACAGGGTGGATCATGATGTCACCGCTGAAGAAGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: FSTRDGMKLRLSAGR*VTGWIMMSPLKKST Trigger: TGTGGACTTCTTCAGCGGTGACATCATGATCCACCCTGTGACCAACCGCCCAGCTGACAAGCGTAGTTTCATCCCATCCCTAGTTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS TCA 72 bp | TTCGAGACACCTTCTCCTTTTCAACTAGGGATGGGATaGAACTACGCTTGTCAGCTGGGCGGTTGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: FETPSPFQLGMG*NYACQLGGWSQ Trigger: CTGTGACCAACCGCCCAGCTGACAAGCGTAGTTTCATCCCATCCCTAGTTGAAAAGGAGAAGGTGTCTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS GCA 72 bp | GCTCATCTCGTGTCCGCAGGGGCTTGTAGATACGTTTaGCATCCAGGTCATAACCCACATGTGGGAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: AHLVSAGACRYV*HPGHNPHVGIH Trigger: ATGAATTCCCACATGTGGGTTATGACCTGGATGGCAAACGTATCTACAAGCCCCTGCGGACACGAGATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CCA 72 bp | GTAGATACGTTTGCCATCCAGGTCATAACCCACATGTaGGAATTCATCGTACCATGCCAGGGGCACATTGCC | + |
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Preference number: 6 (lower is better) Translates to: VDTFAIQVITHM*EFIVPCQGHIA Trigger: GGCAATGTGCCCCTGGCATGGTACGATGAATTCCCACATGTGGGTTATGACCTGGATGGCAAACGTATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 72 bp | TTCTCCTTTTCAACTAGGGATGGGATGAAACTACGCTaGTCAGCTGGGCGGTTGGTCACAGGGTGGATCATG | + |
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Preference number: 6 (lower is better) Translates to: FSFSTRDGMKLR*SAGRLVTGWIM Trigger: CATGATCCACCCTGTGACCAACCGCCCAGCTGACAAGCGTAGTTTCATCCCATCCCTAGTTGAAAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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| CDS CAA 72 bp | AAGGCCTTCTTGTGGTGCCTCAGCACTTTGTATGGCTaGGTGGAAAGATCCAGGTCAAACCACACCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: KAFLWCLSTLYG*VERSRSNHTSL Trigger: CAAACTGGTGTGGTTTGACCTGGATCTTTCCACCAAGCCATACAAAGTGCTGAGGCACCACAAGAAGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023217.11 |
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