Pregenerated sensors for BOLA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047721Ensembl transcript IDs: ENSMUST00000106369.2, ENSMUST00000130498.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TTTGGGAATGAGTTGGTCCCACCCATGGCGAGCGGATGCCCGGGCTaGCATCCGGAGCCTGAGGCTTGGCTGGGTGAGAGGCTGGCTCCC | + |
Preference number: 1 (lower is better) Translates to: FGNELVPPMASGCPG*HPEPEAWLGERLAP Trigger: GGGAGCCAGCCTCTCACCCAGCCAAGCCTCAGGCTCCGGATGGCAGCCCGGGCATCCGCTCGCCATGGGTGGGACCAACTCATTCCCAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106369.2 |
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3UTR GCA 90 bp | TCTCCGGGCTTTGGGAATGAGTTGGTCCCACCCATGGCGAGCGGATaGCCGGGCTGCCATCCGGAGCCTGAGGCTTGGCTGGGTGAGAGG | + |
Preference number: 1 (lower is better) Translates to: SPGFGNELVPPMASG*PGCHPEPEAWLGER Trigger: CCTCTCACCCAGCCAAGCCTCAGGCTCCGGATGGCAGCCCGGGCATCCGCTCGCCATGGGTGGGACCAACTCATTCCCAAAGCCCGGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106369.2 |
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3UTR GCA 90 bp | GGAGAATGCTCAGGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTaGTTTTTGAGGTCTGACCTTGGTGACAGTACAGACCACAGGGTT | + |
Preference number: 1 (lower is better) Translates to: GECSGFLRADRAGTP*FLRSDLGDSTDHRV Trigger: AACCCTGTGGTCTGTACTGTCACCAAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCTGAGCATTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR TCA 90 bp | ACAGAAATTCTGTATCTTGTCTCTGCTACTTCCAGGAACCTGGAGTaGGGGAACCTGGGAGAATGCTCAGGGTTTCTGAGGGCTGACAGA | + |
Preference number: 1 (lower is better) Translates to: TEILYLVSATSRNLE*GNLGECSGFLRADR Trigger: TCTGTCAGCCCTCAGAAACCCTGAGCATTCTCCCAGGTTCCCTCACTCCAGGTTCCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR GCA 90 bp | GTGTACGCCTGTGAAGAGACTGACAGAAATTCTGTATCTTGTCTCTaGTACTTCCAGGAACCTGGAGTGAGGGAACCTGGGAGAATGCTC | + |
Preference number: 1 (lower is better) Translates to: VYACEETDRNSVSCL*YFQEPGVREPGRML Trigger: GAGCATTCTCCCAGGTTCCCTCACTCCAGGTTCCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGTCAGTCTCTTCACAGGCGTACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR-3UTR CCA 90 bp | GCGGCCTCAGCTGGAGTGATGGGCTCCGAAGCTAGGGTGACCAAGGAGATCGGACCGGAGCCTGAGGCTTaGCTGGGTGAGAGGCTGGCT | + |
Preference number: 2 (lower is better) Translates to: AASAGVMGSEARVTKEIGPEPEA*LGERLA Trigger: AGCCAGCCTCTCACCCAGCCAAGCCTCAGGCTCCGG...TCCGATCTCCTTGGTCACCCTAGCTTCGGAGCCCATCACTCCAGCTGAGGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106369.2 |
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3UTR-3UTR CCA 90 bp | GAAGCTAGGGTGACCAAGGAGATCGGAGACGTCTCCAAGAAGTGGGGATTCAAGAGCCTGAGGCTTGGCTaGGTGAGAGGCTGGCTCCCG | + |
Preference number: 2 (lower is better) Translates to: EARVTKEIGDVSKKWGFKSLRLG*VRGWLP Trigger: CGGGAGCCAGCCTCTCACCCAGCCAAGCCTCAGGCT...CTTGAATCCCCACTTCTTGGAGACGTCTCCGATCTCCTTGGTCACCCTAGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106369.2 |
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3UTR-3UTR CCA 90 bp | GAAGCTAGGGTGACCAAGGAGATCGGAGACGTCTCCAAGAAGTGGGGATTCAAGGCTTTGGGAATGAGTTaGTCCCACCCATGGCGAGCG | + |
Preference number: 2 (lower is better) Translates to: EARVTKEIGDVSKKWGFKALGMS*SHPWRA Trigger: CGCTCGCCATGGGTGGGACCAACTCATTCCCAAAGC...CTTGAATCCCCACTTCTTGGAGACGTCTCCGATCTCCTTGGTCACCCTAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106369.2 |
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3UTR-3UTR TCA 90 bp | ACGCCTGTGAAGAGACTGACAGAAATTCTGTATCTTGTCTCTGCTACTTCCAGGAGGGTTTCTGAGGGCTaGCAGAGCAGGAACACCCTG | + |
Preference number: 2 (lower is better) Translates to: TPVKRLTEILYLVSATSRRVSEG*QSRNTL Trigger: CAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCT...CCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGTCAGTCTCTTCACAGGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR-3UTR CCA 90 bp | AGGGCTCAGGAAAGAAATCCATCCAAATTTGCTGAAACAATGGCTGGAGGAGAGGCCACATCCGTGACTTaGCCTCAGGGTCTTCAAACA | + |
Preference number: 2 (lower is better) Translates to: RAQERNPSKFAETMAGGEATSVT*PQGLQT Trigger: TGTTTGAAGACCCTGAGGCCAAGTCACGGATGTGGC...CTCTCCTCCAGCCATTGTTTCAGCAAATTTGGATGGATTTCTTTCCTGAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR CAA 90 bp | CTGACCTTGGTGACAGTACAGACCACAGGGTTTGACAGTAAAGCCTaGGCAGACTTAAGAACCGAATCTTCATTGTTTAAGTTGGGACCT | + |
Preference number: 2 (lower is better) Translates to: LTLVTVQTTGFDSKA*ADLRTESSLFKLGP Trigger: AGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACTGTCAAACCCTGTGGTCTGTACTGTCACCAAGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR-3UTR GCA 90 bp | GCCTGTGAAGAGACTGACAGAAATTCTGTATCTTGTCTCTGCTACTTCCAGGAAAGAGCAGGAACACCCTaGTTTTTGAGGTCTGACCTT | + |
Preference number: 2 (lower is better) Translates to: ACEETDRNSVSCLCYFQERAGTP*FLRSDL Trigger: AAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCT...TTCCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGTCAGTCTCTTCACAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR CAA 90 bp | AGTAAAGCCTTGGCAGACTTAAGAACCGAATCTTCATTGTTTAAGTaGGGACCTAGAGGGCTCAGGAAAGAAATCCATCCAAATTTGCTG | + |
Preference number: 2 (lower is better) Translates to: SKALADLRTESSLFK*GPRGLRKEIHPNLL Trigger: CAGCAAATTTGGATGGATTTCTTTCCTGAGCCCTCTAGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR GCA 72 bp | TCAGGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTaGTTTTTGAGGTCTGACCTTGGTGACAGTACAGAC | + |
Preference number: 3 (lower is better) Translates to: SGFLRADRAGTP*FLRSDLGDSTD Trigger: GTCTGTACTGTCACCAAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR-3UTR CAA 90 bp | GGGAACCTGGGAGAATGCTCAGGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTTTGACAGTAAAGCCTaGGCAGACTTAAGAACCGAA | + |
Preference number: 3 (lower is better) Translates to: GNLGECSGFLRADRAGTPFDSKA*ADLRTE Trigger: TTCGGTTCTTAAGTCTGCCAAGGCTTTACTGTCAAA...GGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCTGAGCATTCTCCCAGGTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR-3UTR CAA 90 bp | GCAGACTTAAGAACCGAATCTTCATTGTTTAAGTTGGGACCTAGAGGGCTCAGGAGCCACATCCGTGACTaGGCCTCAGGGTCTTCAAAC | + |
Preference number: 3 (lower is better) Translates to: ADLRTESSLFKLGPRGLRSHIRD*ASGSSN Trigger: GTTTGAAGACCCTGAGGCCAAGTCACGGATGTGGCT...CCTGAGCCCTCTAGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR CCA 72 bp | AAATTCTGTATCTTGTCTCTGCTACTTCCAGGAACCTaGAGTGAGGGAACCTGGGAGAATGCTCAGGGTTTC | + |
Preference number: 3 (lower is better) Translates to: KFCILSLLLPGT*SEGTWENAQGF Trigger: GAAACCCTGAGCATTCTCCCAGGTTCCCTCACTCCAGGTTCCTGGAAGTAGCAGAGACAAGATACAGAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR TCA 72 bp | CTAGAGGGCTCAGGAAAGAAATCCATCCAAATTTGCTaGAACAATGGCTGGAGGAGAGTCAGGGAAAAGCCA | + |
Preference number: 3 (lower is better) Translates to: LEGSGKKSIQIC*NNGWRRVREKP Trigger: TGGCTTTTCCCTGACTCTCCTCCAGCCATTGTTTCAGCAAATTTGGATGGATTTCTTTCCTGAGCCCTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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CDS-3UTR GCA 90 bp | GTGACCAAGGAGATCGGAGACGTCTCCAAGAAGTGGGGATTCAAGGAGAGGACACACCTCCACATGCTCTaGCTCCAGGTCCTGCCGCAG | + |
Preference number: 4 (lower is better) Translates to: VTKEIGDVSKKWGFKERTHLHML*LQVLPQ Trigger: CTGCGGCAGGACCTGGAGGCAGAGCATGTGGAGGTG...TGTCCTCTCCTTGAATCCCCACTTCTTGGAGACGTCTCCGATCTCCTTGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106369.2 |
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CDS-3UTR GCA 90 bp | GGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTGCTTTTTGAGGTCTGACCTTCACCTCCACATGCTCTaGCTCCAGGTCCTGCCGCAG | + |
Preference number: 4 (lower is better) Translates to: GFLRADRAGTPCFLRSDLHLHML*LQVLPQ Trigger: CTGCGGCAGGACCTGGAGGCAGAGCATGTGGAGGTG...AAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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CDS-3UTR CCA 90 bp | AGTCAGGGAAAAGCCACATCCGTGACTTGGCCTCAGGGTCTTCAAACAGCACACACCAGCCGGTGTCTCTaGAGCAGTGGCTTTCCCTCG | + |
Preference number: 4 (lower is better) Translates to: SQGKATSVTWPQGLQTAHTSRCL*SSGFPS Trigger: CGAGGGAAAGCCACTGCTCCAGAGACACCGGCTGGT...GTGTGCTGTTTGAAGACCCTGAGGCCAAGTCACGGATGTGGCTTTTCCCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR CAA 72 bp | TTTCTGAGGGCTGACAGAGCAGGAACACCCTGCTTTTaGAGGTCTGACCTTGGTGACAGTACAGACCACAGG | + |
Preference number: 4 (lower is better) Translates to: FLRADRAGTPCF*RSDLGDSTDHR Trigger: CCTGTGGTCTGTACTGTCACCAAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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CDS-3UTR CCA 90 bp | AGTAAAGCCTTGGCAGACTTAAGAACCGAATCTTCATTGTTTAAGTTGGGACCTTCGGGTCCACTGCTCTaGGGTCAGAGTTTTCTGCTC | + |
Preference number: 4 (lower is better) Translates to: SKALADLRTESSLFKLGPSGPLL*GQSFLL Trigger: GAGCAGAAAACTCTGACCCCAGAGCAGTGGACCCGA...AGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |
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3UTR CAA 72 bp | GTGACAGTACAGACCACAGGGTTTGACAGTAAAGCCTaGGCAGACTTAAGAACCGAATCTTCATTGTTTAAG | + |
Preference number: 4 (lower is better) Translates to: VTVQTTGFDSKA*ADLRTESSLFK Trigger: CTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACTGTCAAACCCTGTGGTCTGTACTGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130498.2 |