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Pregenerated sensors for BOLA2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047721

Ensembl transcript IDs: ENSMUST00000106369.2, ENSMUST00000130498.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTGGGAATGAGTTGGTCCCACCCATGGCGAGCGGATGCCCGGGCTaGCATCCGGAGCCTGAGGCTTGGCTGGGTGAGAGGCTGGCTCCC +
Preference number: 1 (lower is better)
Translates to: FGNELVPPMASGCPG*HPEPEAWLGERLAP
Trigger: GGGAGCCAGCCTCTCACCCAGCCAAGCCTCAGGCTCCGGATGGCAGCCCGGGCATCCGCTCGCCATGGGTGGGACCAACTCATTCCCAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106369.2
3UTR GCA 90 bp TCTCCGGGCTTTGGGAATGAGTTGGTCCCACCCATGGCGAGCGGATaGCCGGGCTGCCATCCGGAGCCTGAGGCTTGGCTGGGTGAGAGG +
Preference number: 1 (lower is better)
Translates to: SPGFGNELVPPMASG*PGCHPEPEAWLGER
Trigger: CCTCTCACCCAGCCAAGCCTCAGGCTCCGGATGGCAGCCCGGGCATCCGCTCGCCATGGGTGGGACCAACTCATTCCCAAAGCCCGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106369.2
3UTR GCA 90 bp GGAGAATGCTCAGGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTaGTTTTTGAGGTCTGACCTTGGTGACAGTACAGACCACAGGGTT +
Preference number: 1 (lower is better)
Translates to: GECSGFLRADRAGTP*FLRSDLGDSTDHRV
Trigger: AACCCTGTGGTCTGTACTGTCACCAAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCTGAGCATTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR TCA 90 bp ACAGAAATTCTGTATCTTGTCTCTGCTACTTCCAGGAACCTGGAGTaGGGGAACCTGGGAGAATGCTCAGGGTTTCTGAGGGCTGACAGA +
Preference number: 1 (lower is better)
Translates to: TEILYLVSATSRNLE*GNLGECSGFLRADR
Trigger: TCTGTCAGCCCTCAGAAACCCTGAGCATTCTCCCAGGTTCCCTCACTCCAGGTTCCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR GCA 90 bp GTGTACGCCTGTGAAGAGACTGACAGAAATTCTGTATCTTGTCTCTaGTACTTCCAGGAACCTGGAGTGAGGGAACCTGGGAGAATGCTC +
Preference number: 1 (lower is better)
Translates to: VYACEETDRNSVSCL*YFQEPGVREPGRML
Trigger: GAGCATTCTCCCAGGTTCCCTCACTCCAGGTTCCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGTCAGTCTCTTCACAGGCGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR-3UTR CCA 90 bp GCGGCCTCAGCTGGAGTGATGGGCTCCGAAGCTAGGGTGACCAAGGAGATCGGACCGGAGCCTGAGGCTTaGCTGGGTGAGAGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: AASAGVMGSEARVTKEIGPEPEA*LGERLA
Trigger: AGCCAGCCTCTCACCCAGCCAAGCCTCAGGCTCCGG...TCCGATCTCCTTGGTCACCCTAGCTTCGGAGCCCATCACTCCAGCTGAGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106369.2
3UTR-3UTR CCA 90 bp GAAGCTAGGGTGACCAAGGAGATCGGAGACGTCTCCAAGAAGTGGGGATTCAAGAGCCTGAGGCTTGGCTaGGTGAGAGGCTGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: EARVTKEIGDVSKKWGFKSLRLG*VRGWLP
Trigger: CGGGAGCCAGCCTCTCACCCAGCCAAGCCTCAGGCT...CTTGAATCCCCACTTCTTGGAGACGTCTCCGATCTCCTTGGTCACCCTAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106369.2
3UTR-3UTR CCA 90 bp GAAGCTAGGGTGACCAAGGAGATCGGAGACGTCTCCAAGAAGTGGGGATTCAAGGCTTTGGGAATGAGTTaGTCCCACCCATGGCGAGCG +
Preference number: 2 (lower is better)
Translates to: EARVTKEIGDVSKKWGFKALGMS*SHPWRA
Trigger: CGCTCGCCATGGGTGGGACCAACTCATTCCCAAAGC...CTTGAATCCCCACTTCTTGGAGACGTCTCCGATCTCCTTGGTCACCCTAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106369.2
3UTR-3UTR TCA 90 bp ACGCCTGTGAAGAGACTGACAGAAATTCTGTATCTTGTCTCTGCTACTTCCAGGAGGGTTTCTGAGGGCTaGCAGAGCAGGAACACCCTG +
Preference number: 2 (lower is better)
Translates to: TPVKRLTEILYLVSATSRRVSEG*QSRNTL
Trigger: CAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCT...CCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGTCAGTCTCTTCACAGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR-3UTR CCA 90 bp AGGGCTCAGGAAAGAAATCCATCCAAATTTGCTGAAACAATGGCTGGAGGAGAGGCCACATCCGTGACTTaGCCTCAGGGTCTTCAAACA +
Preference number: 2 (lower is better)
Translates to: RAQERNPSKFAETMAGGEATSVT*PQGLQT
Trigger: TGTTTGAAGACCCTGAGGCCAAGTCACGGATGTGGC...CTCTCCTCCAGCCATTGTTTCAGCAAATTTGGATGGATTTCTTTCCTGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR CAA 90 bp CTGACCTTGGTGACAGTACAGACCACAGGGTTTGACAGTAAAGCCTaGGCAGACTTAAGAACCGAATCTTCATTGTTTAAGTTGGGACCT +
Preference number: 2 (lower is better)
Translates to: LTLVTVQTTGFDSKA*ADLRTESSLFKLGP
Trigger: AGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACTGTCAAACCCTGTGGTCTGTACTGTCACCAAGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR-3UTR GCA 90 bp GCCTGTGAAGAGACTGACAGAAATTCTGTATCTTGTCTCTGCTACTTCCAGGAAAGAGCAGGAACACCCTaGTTTTTGAGGTCTGACCTT +
Preference number: 2 (lower is better)
Translates to: ACEETDRNSVSCLCYFQERAGTP*FLRSDL
Trigger: AAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCT...TTCCTGGAAGTAGCAGAGACAAGATACAGAATTTCTGTCAGTCTCTTCACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR CAA 90 bp AGTAAAGCCTTGGCAGACTTAAGAACCGAATCTTCATTGTTTAAGTaGGGACCTAGAGGGCTCAGGAAAGAAATCCATCCAAATTTGCTG +
Preference number: 2 (lower is better)
Translates to: SKALADLRTESSLFK*GPRGLRKEIHPNLL
Trigger: CAGCAAATTTGGATGGATTTCTTTCCTGAGCCCTCTAGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR GCA 72 bp TCAGGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTaGTTTTTGAGGTCTGACCTTGGTGACAGTACAGAC +
Preference number: 3 (lower is better)
Translates to: SGFLRADRAGTP*FLRSDLGDSTD
Trigger: GTCTGTACTGTCACCAAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR-3UTR CAA 90 bp GGGAACCTGGGAGAATGCTCAGGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTTTGACAGTAAAGCCTaGGCAGACTTAAGAACCGAA +
Preference number: 3 (lower is better)
Translates to: GNLGECSGFLRADRAGTPFDSKA*ADLRTE
Trigger: TTCGGTTCTTAAGTCTGCCAAGGCTTTACTGTCAAA...GGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCCTGAGCATTCTCCCAGGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR-3UTR CAA 90 bp GCAGACTTAAGAACCGAATCTTCATTGTTTAAGTTGGGACCTAGAGGGCTCAGGAGCCACATCCGTGACTaGGCCTCAGGGTCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: ADLRTESSLFKLGPRGLRSHIRD*ASGSSN
Trigger: GTTTGAAGACCCTGAGGCCAAGTCACGGATGTGGCT...CCTGAGCCCTCTAGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR CCA 72 bp AAATTCTGTATCTTGTCTCTGCTACTTCCAGGAACCTaGAGTGAGGGAACCTGGGAGAATGCTCAGGGTTTC +
Preference number: 3 (lower is better)
Translates to: KFCILSLLLPGT*SEGTWENAQGF
Trigger: GAAACCCTGAGCATTCTCCCAGGTTCCCTCACTCCAGGTTCCTGGAAGTAGCAGAGACAAGATACAGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR TCA 72 bp CTAGAGGGCTCAGGAAAGAAATCCATCCAAATTTGCTaGAACAATGGCTGGAGGAGAGTCAGGGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: LEGSGKKSIQIC*NNGWRRVREKP
Trigger: TGGCTTTTCCCTGACTCTCCTCCAGCCATTGTTTCAGCAAATTTGGATGGATTTCTTTCCTGAGCCCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
CDS-3UTR GCA 90 bp GTGACCAAGGAGATCGGAGACGTCTCCAAGAAGTGGGGATTCAAGGAGAGGACACACCTCCACATGCTCTaGCTCCAGGTCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VTKEIGDVSKKWGFKERTHLHML*LQVLPQ
Trigger: CTGCGGCAGGACCTGGAGGCAGAGCATGTGGAGGTG...TGTCCTCTCCTTGAATCCCCACTTCTTGGAGACGTCTCCGATCTCCTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106369.2
CDS-3UTR GCA 90 bp GGGTTTCTGAGGGCTGACAGAGCAGGAACACCCTGCTTTTTGAGGTCTGACCTTCACCTCCACATGCTCTaGCTCCAGGTCCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GFLRADRAGTPCFLRSDLHLHML*LQVLPQ
Trigger: CTGCGGCAGGACCTGGAGGCAGAGCATGTGGAGGTG...AAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
CDS-3UTR CCA 90 bp AGTCAGGGAAAAGCCACATCCGTGACTTGGCCTCAGGGTCTTCAAACAGCACACACCAGCCGGTGTCTCTaGAGCAGTGGCTTTCCCTCG +
Preference number: 4 (lower is better)
Translates to: SQGKATSVTWPQGLQTAHTSRCL*SSGFPS
Trigger: CGAGGGAAAGCCACTGCTCCAGAGACACCGGCTGGT...GTGTGCTGTTTGAAGACCCTGAGGCCAAGTCACGGATGTGGCTTTTCCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR CAA 72 bp TTTCTGAGGGCTGACAGAGCAGGAACACCCTGCTTTTaGAGGTCTGACCTTGGTGACAGTACAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: FLRADRAGTPCF*RSDLGDSTDHR
Trigger: CCTGTGGTCTGTACTGTCACCAAGGTCAGACCTCAAAAAGCAGGGTGTTCCTGCTCTGTCAGCCCTCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
CDS-3UTR CCA 90 bp AGTAAAGCCTTGGCAGACTTAAGAACCGAATCTTCATTGTTTAAGTTGGGACCTTCGGGTCCACTGCTCTaGGGTCAGAGTTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SKALADLRTESSLFKLGPSGPLL*GQSFLL
Trigger: GAGCAGAAAACTCTGACCCCAGAGCAGTGGACCCGA...AGGTCCCAACTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2
3UTR CAA 72 bp GTGACAGTACAGACCACAGGGTTTGACAGTAAAGCCTaGGCAGACTTAAGAACCGAATCTTCATTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: VTVQTTGFDSKA*ADLRTESSLFK
Trigger: CTTAAACAATGAAGATTCGGTTCTTAAGTCTGCCAAGGCTTTACTGTCAAACCCTGTGGTCTGTACTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130498.2