Pregenerated sensors for BOK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026278Ensembl transcript IDs: ENSMUST00000027499.13, ENSMUST00000188394.2, ENSMUST00000200888.2, ENSMUST00000201863.4
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGGAGAAGAGCTAGAGCAGTCACAGAGGCCAGCTCCAGACTCTaGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGG | + |
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Preference number: 1 (lower is better) Translates to: SRRRARAVTEASSRL*LSPHSSLRGQGPQR Trigger: CCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTCTGTGACTGCTCTAGCTCTTCTCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR CCA 90 bp | GCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATaGGTTTGGGACAGGGCCCCAGGGGCTAAATGCTCCCAATTTGAG | + |
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Preference number: 1 (lower is better) Translates to: AFSTLLSQRPGSTKE*VWDRAPGAKCSQFE Trigger: CTCAAATTGGGAGCATTTAGCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR TCA 90 bp | TATACAGACCCCCTCATCCACAGGATCTCTTGTTCATTGGTCAGGTaGACTAGCCTAGAGCCCTACCTCTCTGGTTCCTGCCATGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: YTDPLIHRISCSLVR*TSLEPYLSGSCHEG Trigger: TCCTTCATGGCAGGAACCAGAGAGGTAGGGCTCTAGGCTAGTTCACCTGACCAATGAACAAGAGATCCTGTGGATGAGGGGGTCTGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAGCTCCAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTGAGTGGCCCCTGCCCTaGTGGCCAGCTCATCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: EASSRLWLSPHSSLRGQGEWPLP*WPAHLS Trigger: AGAGAGATGAGCTGGCCACCAGGGCAGGGGCCACTC...ACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGACTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGAGCAGTCACAGAGGTGGCCCCTGCCCTGGTaGCCAGCTCATCTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: DPDFLAGVPGEELEQSQRWPLPW*PAHLSG Trigger: GCCAGAGAGATGAGCTGGCCACCAGGGCAGGGGCCA...CCTCTGTGACTGCTCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTACCTCTCTGGTTCCTGCCATGAAGGACCCATCGTGGCTTAGGGATACCGGGTCCACAAAGGAATaGGTTTGGGACAGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SPTSLVPAMKDPSWLRDTGSTKE*VWDRAP Trigger: TGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCC...GGTATCCCTAAGCCACGATGGGTCCTTCATGGCAGGAACCAGAGAGGTAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGCAGTCACAGAGGCCAGCTCCAGACTCTGGCTTTCTCCACACTCCTCTCGGGTCCACAAAGGAATaGGTTTGGGACAGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LEQSQRPAPDSGFLHTPLGSTKE*VWDRAP Trigger: TGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCC...GAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTCTGTGACTGCTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGTGCTTTGTAGGTACTaGAGGCCCCTTGGATTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LQTLAFSTLLSQRPGSTKVLCRY*RPLGLG Trigger: GCCCAATCCAAGGGGCCTCCAGTACCTACAAAGCAC...CTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGACTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGAGCAGTCACAGAGGACAAAGGAATGGGTTTaGGACAGGGCCCCAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: DPDFLAGVPGEELEQSQRTKEWV*DRAPGA Trigger: AGCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGT...CCTCTGTGACTGCTCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTCCACAAAGGAATGGGTTTGGGACAGGGCCCCAGGGGCTAAATGCTCCCGCCAGCTCATCTCTCTaGCAACAACAGGAAGAATGC | + |
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Preference number: 2 (lower is better) Translates to: QGPQRNGFGTGPQGLNAPASSSL*QQQEEC Trigger: GCATTCTTCCTGTTGTTGCCAGAGAGATGAGCTGGC...GGGAGCATTTAGCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGTGCTTTGTAGGTACTaGAGGCCCCTTGGATTGGGC | + |
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Preference number: 2 (lower is better) Translates to: RLWLSPHSSLRGQGPQRNVLCRY*RPLGLG Trigger: GCCCAATCCAAGGGGCCTCCAGTACCTACAAAGCAC...ATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGTGGAGGCCCCTTGGATaGGGCCCAGGGACCCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: SRLWLSPHSSLRGQGPQRWRPLG*GPGTLG Trigger: TCCTAGGGTCCCTGGGCCCAATCCAAGGGGCCTCCA...CCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGTGGAGGCCCCTTGGATaGGGCCCAGGGACCCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: TLAFSTLLSQRPGSTKEWWRPLG*GPGTLG Trigger: TCCTAGGGTCCCTGGGCCCAATCCAAGGGGCCTCCA...CCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCTAGAGCAGTCACAGAGGCCAGCTCCAGACTCTGGCTTTCTCCACACTCCTCACAAAGGAATGGGTTaGGGACAGGGCCCCAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: ELEQSQRPAPDSGFLHTPHKGMG*GQGPRG Trigger: GCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGTG...AGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTCTGTGACTGCTCTAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR CCA 72 bp | ACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATaGGTTTGGGACAGGGCCCCAGGGGCTAAATGCTCC | + |
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Preference number: 3 (lower is better) Translates to: TLLSQRPGSTKE*VWDRAPGAKCS Trigger: GGAGCATTTAGCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR CCA 72 bp | AGAGCTAGAGCAGTCACAGAGGCCAGCTCCAGACTCTaGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: RARAVTEASSRL*LSPHSSLRGQG Trigger: ACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTCTGTGACTGCTCTAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR CCA 72 bp | CTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGGTTTaGGACAGGGCCCCAGGGGCTAAATGCTCCCAATTT | + |
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Preference number: 3 (lower is better) Translates to: LSQRPGSTKEWV*DRAPGAKCSQF Trigger: AAATTGGGAGCATTTAGCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCCTGGCCTCTGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR TCA 72 bp | TCACAGGTCCCTTTCTCTAGGGCTGGACACCGACCCTaGCTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: SQVPFSRAGHRP*LSGRSSRRRAR Trigger: TCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTCGGTGTCCAGCCCTAGAGAAAGGGACCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR TCA 72 bp | AAGGCCCCTTCCTTGGGTGGGGCCTGGGAAATCGAGTaGAAGTATTCACAGGTCCCTTTCTCTAGGGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: KAPSLGGAWEIE*KYSQVPFSRAG Trigger: TCCAGCCCTAGAGAAAGGGACCTGTGAATACTTTCACTCGATTTCCCAGGCCCCACCCAAGGAAGGGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCCAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACACTAAATGCTCCCAATTaGAGTGAGGGAGGTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: QLQTLAFSTLLSQRPGSTLNAPN*SEGGAL Trigger: CAAAGCACCTCCCTCACTCAAATTGGGAGCATTTAG...TGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| 3UTR TCA 72 bp | CCCCTCATCCACAGGATCTCTTGTTCATTGGTCAGGTaGACTAGCCTAGAGCCCTACCTCTCTGGTTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PLIHRISCSLVR*TSLEPYLSGSC Trigger: GCAGGAACCAGAGAGGTAGGGCTCTAGGCTAGTTCACCTGACCAATGAACAAGAGATCCTGTGGATGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGCTAAATGCTCCCAATTaGAGTGAGGGAGGTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LQTLAFSTLLSQRPGSTKLNAPN*SEGGAL Trigger: CAAAGCACCTCCCTCACTCAAATTGGGAGCATTTAG...CTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR CCA 90 bp | GCCCCTTGGATTGGGCCCAGGGACCCTAGGAGTGGCCCCTGCCCTGGTGGCCAGGTGGCCACGAGCCAGTaGGAGCGGAAGCCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: APWIGPRDPRSGPCPGGQVATSQ*ERKPGS Trigger: AGATCCTGGCTTCCGCTCCCACTGGCTCGTGGCCAC...CTGGCCACCAGGGCAGGGGCCACTCCTAGGGTCCCTGGGCCCAATCCAAGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR CCA 90 bp | GCCCCTTGGATTGGGCCCAGGGACCCTAGGAGTGGCCCCTGCCCTGGTGGCCAGCAAAGCTGCAGAGCGTaGCCACGAGCCAGTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: APWIGPRDPRSGPCPGGQQSCRA*PRASGS Trigger: GCTCCCACTGGCTCGTGGCCACGCTCTGCAGCTTTG...CTGGCCACCAGGGCAGGGGCCACTCCTAGGGTCCCTGGGCCCAATCCAAGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR GCA 90 bp | GCCCCTTGGATTGGGCCCAGGGACCCTAGGAGTGGCCCCTGCCCTGGTGGCCAGAGCGCAGCAGCACTGTaGACACCTCTGCCAAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: APWIGPRDPRSGPCPGGQSAAAL*TPLPSV Trigger: GACGCTTGGCAGAGGTGTGCACAGTGCTGCTGCGCT...CTGGCCACCAGGGCAGGGGCCACTCCTAGGGTCCCTGGGCCCAATCCAAGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGGTCCACAAAGGAATGGGTTTGGGACAGGGCCCCAGGGGCTAAATGCAGGCGAGGCACGCTCTaGAGCGCTCCAGGAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPGSTKEWVWDRAPGAKCRRGTL*SAPGEA Trigger: GGCCTCTCCTGGAGCGCTCCAGAGCGTGCCTCGCCT...GCATTTAGCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCCTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR GCA 90 bp | GAGGCCAGCTCCAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTAGGGGGATGTGCAGCTaGCGGGCCACGTTCCGGTAT | + |
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Preference number: 4 (lower is better) Translates to: EASSRLWLSPHSSLRGQGRGMCS*RATFRY Trigger: ATACCGGAACGTGGCCCGGCAGCTGCACATCCCCCT...ACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR GCA 90 bp | GGGCTGGACACCGACCCTGACTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGAGGACTGCAGGGGGATGTaGAGCTGCCGGGCCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: GLDTDPDFLAGVPGEELEDCRGM*SCRATF Trigger: GAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGTC...CTCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTCGGTGTCCAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR GCA 90 bp | CTAGAGCAGTCACAGAGGCCAGCTCCAGACTCTGGCTTTCTCCACACTCCTCTCCGCAAAAGCCGCGCGTaGACGTACTCCCGGCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: LEQSQRPAPDSGFLHTPLRKSRA*TYSRPS Trigger: ACTAGGCCGGGAGTACGTGCACGCGCGGCTTTTGCG...GAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTCTGTGACTGCTCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR CCA 90 bp | GAGGCCAGCTCCAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCAGCTCCTTGTCTGTaGGCGAGCGATCAAAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: EASSRLWLSPHSSLRGQGPAPCL*ASDQRR Trigger: ACGCCTTTGATCGCTCGCCCACAGACAAGGAGCTGG...ACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR CCA 90 bp | GTACAGGACCTGCTTTCCACAAAGACTGAGGCCAGCTCATGTCTGGGGAAGGCCGTGGCCACGAGCCAGTaGGAGCGGAAGCCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: VQDLLSTKTEASSCLGKAVATSQ*ERKPGS Trigger: AGATCCTGGCTTCCGCTCCCACTGGCTCGTGGCCAC...GGCCTTCCCCAGACATGAGCTGGCCTCAGTCTTTGTGGAAAGCAGGTCCTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR GCA 90 bp | CAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAAACCACAGGCTCCGACTaGAGGGGGATGTGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QTLAFSTLLSQRPGSTKETTGSD*RGMCSC Trigger: GCAGCTGCACATCCCCCTGCAGTCGGAGCCTGTGGT...TTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR CCA 90 bp | CAGACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAACCAGGGCATGAACCATaGCAGGCTGAGCCTGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: QTLAFSTLLSQRPGSTKEPGHEP*QAEPAG Trigger: TCCGGCAGGCTCAGCCTGCCATGGTTCATGCCCTGG...TTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR CCA 90 bp | GACCCTGACTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGAGCAGTCACAGAGGCAAAGCTGCAGAGCGTaGCCACGAGCCAGTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DPDFLAGVPGEELEQSQRQSCRA*PRASGS Trigger: GCTCCCACTGGCTCGTGGCCACGCTCTGCAGCTTTG...CCTCTGTGACTGCTCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR TCA 90 bp | TCCACAAAGGAATGGGTTTGGGACAGGGCCCCAGGGGCTAAATGCTCCCAATTTCCTGAGCAGGACACCTaGGAGCCATCCACCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: STKEWVWDRAPGAKCSQFPEQDT*EPSTTP Trigger: AGGCGTGGTGGATGGCTCTCAGGTGTCCTGCTCAGG...AAATTGGGAGCATTTAGCCCCTGGGGCCCTGTCCCAAACCCATTCCTTTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS-3UTR CCA 90 bp | ACCCTAGGAGTGGCCCCTGCCCTGGTGGCCAGCTCATCTCTCTGGCAACAACAGATCCGTATAGGTGTTTaGGAACGGATGCTGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TLGVAPALVASSSLWQQQIRIGV*ERMLWV Trigger: GACCCACAGCATCCGTTCCCAAACACCTATACGGAT...CTGTTGTTGCCAGAGAGATGAGCTGGCCACCAGGGCAGGGGCCACTCCTAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS-3UTR GCA 90 bp | GACCCTGACTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGAGCAGTCACAGAGGACGCTGGGACGGATCTaGTCCAGCTCATCTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: DPDFLAGVPGEELEQSQRTLGRI*SSSSPK Trigger: CTTGGGAGATGAGCTGGAGCAGATCCGTCCCAGCGT...CCTCTGTGACTGCTCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR CCA 90 bp | TTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGGTTTGGGACCCTAGTGCCTTAGCCTaGGCCACCAGCTCCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FSTLLSQRPGSTKEWVWDPSALA*ATSSLS Trigger: AGACAAGGAGCTGGTGGCCCAGGCTAAGGCACTAGG...GTCCCAAACCCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR CCA 90 bp | ACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGCCTGCTGAGAAGATGTaGCCTGCCACTGCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TLAFSTLLSQRPGSTKEWPAEKM*PATARK Trigger: CTTCCTGGCAGTGGCAGGCCACATCTTCTCAGCAGG...CCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR TCA 90 bp | AGCCCTACCTCTCTGGTTCCTGCCATGAAGGACCCATCGTGGCTTAGGGATACCGATCAAAGGCGTCCATaGTCTCCGCTGCAAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SPTSLVPAMKDPSWLRDTDQRRP*SPLQRQ Trigger: CTGTCTTTGCAGCGGAGATCATGGACGCCTTTGATC...GGTATCCCTAAGCCACGATGGGTCCTTCATGGCAGGAACCAGAGAGGTAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR TCA 90 bp | GACACCGACCCTGACTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGAGCAGTCACCATGTGATACCTGCTaGGAAGATGTGGCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DTDPDFLAGVPGEELEQSPCDTC*EDVACH Trigger: GTGGCAGGCCACATCTTCTCAGCAGGTATCACATGG...TGACTGCTCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTCGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGGTTTGGGACCCATGTGATACCTGCTaGGAAGATGTGGCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FSTLLSQRPGSTKEWVWDPCDTC*EDVACH Trigger: GTGGCAGGCCACATCTTCTCAGCAGGTATCACATGG...GTCCCAAACCCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR TCA 90 bp | ACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGATCTGGACCAAAACCTaGGCAGGACACCTGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLAFSTLLSQRPGSTKEWIWTKT*AGHLRA Trigger: GGCTCTCAGGTGTCCTGCTCAGGTTTTGGTCCAGAT...CCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS-3UTR GCA 90 bp | ATGTACAGGACCTGCTTTCCACAAAGACTGAGGCCAGCTCATGTCTGGGGAAGGGTCCATGATCTCCGCTaGAAAGACAGAAGAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: MYRTCFPQRLRPAHVWGRVHDLR*KDRRAP Trigger: CGGCGCTCTTCTGTCTTTGCAGCGGAGATCATGGAC...CCTTCCCCAGACATGAGCTGGCCTCAGTCTTTGTGGAAAGCAGGTCCTGTACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS GCA 90 bp | CTGCTCCAGCTCATCTCCCAAGCGCAGCAGCACTGTGCACACCTCTaGCAAGCGTCCTCCAGGGGCAGGCGAGGCACGCTCTGGAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: LLQLISQAQQHCAHL*QASSRGRRGTLWSA Trigger: AGCGCTCCAGAGCGTGCCTCGCCTGCCCCTGGAGGACGCTTGGCAGAGGTGTGCACAGTGCTGCTGCGCTTGGGAGATGAGCTGGAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 90 bp | GCCAGGAAGGCATCCGTCACCACAGGCTCCGACTGCAGGGGGATGTaGAGCTGCCGGGCCACGTTCCGGTATACGCTGGGACGGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: ARKASVTTGSDCRGM*SCRATFRYTLGRIC Trigger: GCAGATCCGTCCCAGCGTATACCGGAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGTCGGAGCCTGTGGTGACGGATGCCTTCCTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 90 bp | TGGCCTGCCACTGCCAGGAAGGCATCCGTCACCACAGGCTCCGACTaGAGGGGGATGTGCAGCTGCCGGGCCACGTTCCGGTATACGCTG | + |
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Preference number: 5 (lower is better) Translates to: WPATARKASVTTGSD*RGMCSCRATFRYTL Trigger: CAGCGTATACCGGAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGTCGGAGCCTGTGGTGACGGATGCCTTCCTGGCAGTGGCAGGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 90 bp | AAGGCATCCGTCACCACAGGCTCCGACTGCAGGGGGATGTGCAGCTaGCGGGCCACGTTCCGGTATACGCTGGGACGGATCTGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: KASVTTGSDCRGMCS*RATFRYTLGRICSS Trigger: GCTGGAGCAGATCCGTCCCAGCGTATACCGGAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGTCGGAGCCTGTGGTGACGGATGCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CCA 90 bp | CGCAAAAGCCGCGCGTGCACGTACTCCCGGCCTAGTGCCTTAGCCTaGGCCACCAGCTCCTTGTCTGTGGGCGAGCGATCAAAGGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: RKSRACTYSRPSALA*ATSSLSVGERSKAS Trigger: GGACGCCTTTGATCGCTCGCCCACAGACAAGGAGCTGGTGGCCCAGGCTAAGGCACTAGGCCGGGAGTACGTGCACGCGCGGCTTTTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CCA 90 bp | ACTGCAGGGGGATGTGCAGCTGCCGGGCCACGTTCCGGTATACGCTaGGACGGATCTGCTCCAGCTCATCTCCCAAGCGCAGCAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: TAGGCAAAGPRSGIR*DGSAPAHLPSAAAL Trigger: CAGTGCTGCTGCGCTTGGGAGATGAGCTGGAGCAGATCCGTCCCAGCGTATACCGGAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CCA 90 bp | TCTTGCGTACAAACTCCCCCAGGCAGTCAACCAGGGCATGAACCATaGCAGGCTGAGCCTGCCGGACACAGTCCACCGCTAGCCCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SCVQTPPGSQPGHEP*QAEPAGHSPPLAPR Trigger: CCGCGGGGCTAGCGGTGGACTGTGTCCGGCAGGCTCAGCCTGCCATGGTTCATGCCCTGGTTGACTGCCTGGGGGAGTTTGTACGCAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 ENSMUST00000201863.4 |
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| CDS GCA 90 bp | CTGGCAACAACAGGAAGAATGCTGCCTTCAGGAAGCGGCCAAAGCTaGAGAGCGTGGCCACGAGCCAGTGGGAGCGGAAGCCAGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: LATTGRMLPSGSGQS*RAWPRASGSGSQDL Trigger: CAGATCCTGGCTTCCGCTCCCACTGGCTCGTGGCCACGCTCTGCAGCTTTGGCCGCTTCCTGAAGGCAGCATTCTTCCTGTTGTTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000201863.4 |
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| CDS-3UTR CAA 90 bp | CCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGGTTTGGGACAGGGCCCCAGGCAGGTAGCCAAGGTCTaGCGTACAAACTCCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PLSEARVHKGMGLGQGPRQVAKV*RTNSPR Trigger: CCTGGGGGAGTTTGTACGCAAGACCTTGGCTACCTG...CCTGGGGCCCTGTCCCAAACCCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR CAA 90 bp | GAGCTAGAGCAGTCACAGAGGCCAGCTCCAGACTCTGGCTTTCTCCACACTCCTTGGGCCACCAGCTCCTaGTCTGTGGGCGAGCGATCA | + |
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Preference number: 5 (lower is better) Translates to: ELEQSQRPAPDSGFLHTPWATSS*SVGERS Trigger: TGATCGCTCGCCCACAGACAAGGAGCTGGTGGCCCA...AGGAGTGTGGAGAAAGCCAGAGTCTGGAGCTGGCCTCTGTGACTGCTCTAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS TCA 90 bp | ACGGATGCTGTGGGTCCATCTGGACCAAAACCTGAGCAGGACACCTaGGAGCCATCCACCACGCCTCCGAAGCCAGGTAGCCAAGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: TDAVGPSGPKPEQDT*EPSTTPPKPGSQGL Trigger: AAGACCTTGGCTACCTGGCTTCGGAGGCGTGGTGGATGGCTCTCAGGTGTCCTGCTCAGGTTTTGGTCCAGATGGACCCACAGCATCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGGTTTGGGACCAGGTAGCCAAGGTCTaGCGTACAAACTCCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FSTLLSQRPGSTKEWVWDQVAKV*RTNSPR Trigger: CCTGGGGGAGTTTGTACGCAAGACCTTGGCTACCTG...GTCCCAAACCCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR CAA 90 bp | AGGAGTTCCAGGAGAAGAGCTAGAGCAGTCACAGAGGCCAGCTCCAGACTCTGGTACAGGGACACTACCTaGCCCCATGTGATACCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RSSRRRARAVTEASSRLWYRDTT*PHVIPA Trigger: AGCAGGTATCACATGGGGCAAGGTAGTGTCCCTGTA...CCAGAGTCTGGAGCTGGCCTCTGTGACTGCTCTAGCTCTTCTCCTGGAACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS-3UTR CAA 90 bp | GACCCTGACTTTCTGGCAGGAGTTCCAGGAGAAGAGCTAGAGCAGTCACAGAGGGTGCTGACCACACACTaGAGGACATCCGTCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: DPDFLAGVPGEELEQSQRVLTTH*RTSVHP Trigger: TGGATGGACGGATGTCCTCAAGTGTGTGGTCAGCAC...CCTCTGTGACTGCTCTAGCTCTTCTCCTGGAACTCCTGCCAGAAAGTCAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027499.13 |
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| CDS-3UTR CAA 90 bp | ACTCTGGCTTTCTCCACACTCCTCTCTCAGAGGCCAGGGTCCACAAAGGAATGGTACAGGGACACTACCTaGCCCCATGTGATACCTGCT | + |
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Preference number: 5 (lower is better) Translates to: TLAFSTLLSQRPGSTKEWYRDTT*PHVIPA Trigger: AGCAGGTATCACATGGGGCAAGGTAGTGTCCCTGTA...CCATTCCTTTGTGGACCCTGGCCTCTGAGAGAGGAGTGTGGAGAAAGCCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 |
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| CDS CCA 90 bp | AGGATCTGTGCTGACCACACACTTGAGGACATCCGTATAGGTGTTTaGGAACGGATGCTGTGGGTCCATCTGGACCAAAACCTGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RICADHTLEDIRIGV*ERMLWVHLDQNLSR Trigger: CCTGCTCAGGTTTTGGTCCAGATGGACCCACAGCATCCGTTCCCAAACACCTATACGGATGTCCTCAAGTGTGTGGTCAGCACAGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS GCA 72 bp | GCGCTCCAGGAGAGGCCGGCGCGCAAAAGCCGCGCGTaGACGTACTCCCGGCCTAGTGCCTTAGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALQERPARKSRA*TYSRPSALAWA Trigger: GGCCCAGGCTAAGGCACTAGGCCGGGAGTACGTGCACGCGCGGCTTTTGCGCGCCGGCCTCTCCTGGAGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CCA 72 bp | TGCCAAGCGTCCTCCAGGGGCAGGCGAGGCACGCTCTaGAGCGCTCCAGGAGAGGCCGGCGCGCAAAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: CQASSRGRRGTL*SAPGEAGAQKP Trigger: CGGCTTTTGCGCGCCGGCCTCTCCTGGAGCGCTCCAGAGCGTGCCTCGCCTGCCCCTGGAGGACGCTTGGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 72 bp | ACTGCCAGGAAGGCATCCGTCACCACAGGCTCCGACTaGAGGGGGATGTGCAGCTGCCGGGCCACGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: TARKASVTTGSD*RGMCSCRATFR Trigger: CCGGAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGTCGGAGCCTGTGGTGACGGATGCCTTCCTGGCAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 72 bp | CTCATCTCCCAAGCGCAGCAGCACTGTGCACACCTCTaGCAAGCGTCCTCCAGGGGCAGGCGAGGCACGCTC | + |
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Preference number: 6 (lower is better) Translates to: LISQAQQHCAHL*QASSRGRRGTL Trigger: GAGCGTGCCTCGCCTGCCCCTGGAGGACGCTTGGCAGAGGTGTGCACAGTGCTGCTGCGCTTGGGAGATGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 72 bp | GTCACCACAGGCTCCGACTGCAGGGGGATGTGCAGCTaGCGGGCCACGTTCCGGTATACGCTGGGACGGATC | + |
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Preference number: 6 (lower is better) Translates to: VTTGSDCRGMCS*RATFRYTLGRI Trigger: GATCCGTCCCAGCGTATACCGGAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGTCGGAGCCTGTGGTGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 72 bp | GCATCCGTCACCACAGGCTCCGACTGCAGGGGGATGTaGAGCTGCCGGGCCACGTTCCGGTATACGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ASVTTGSDCRGM*SCRATFRYTLG Trigger: TCCCAGCGTATACCGGAACGTGGCCCGGCAGCTGCACATCCCCCTGCAGTCGGAGCCTGTGGTGACGGATGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CCA 72 bp | CGCGCGTGCACGTACTCCCGGCCTAGTGCCTTAGCCTaGGCCACCAGCTCCTTGTCTGTGGGCGAGCGATCA | + |
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Preference number: 6 (lower is better) Translates to: RACTYSRPSALA*ATSSLSVGERS Trigger: TGATCGCTCGCCCACAGACAAGGAGCTGGTGGCCCAGGCTAAGGCACTAGGCCGGGAGTACGTGCACGCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS GCA 72 bp | TGCCGGGCCACGTTCCGGTATACGCTGGGACGGATCTaGTCCAGCTCATCTCCCAAGCGCAGCAGCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: CRATFRYTLGRI*SSSSPKRSSTV Trigger: CACAGTGCTGCTGCGCTTGGGAGATGAGCTGGAGCAGATCCGTCCCAGCGTATACCGGAACGTGGCCCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CCA 72 bp | GGATGTGCAGCTGCCGGGCCACGTTCCGGTATACGCTaGGACGGATCTGCTCCAGCTCATCTCCCAAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GCAAAGPRSGIR*DGSAPAHLPSA Trigger: TGCGCTTGGGAGATGAGCTGGAGCAGATCCGTCCCAGCGTATACCGGAACGTGGCCCGGCAGCTGCACATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CAA 90 bp | TGCACGTACTCCCGGCCTAGTGCCTTAGCCTGGGCCACCAGCTCCTaGTCTGTGGGCGAGCGATCAAAGGCGTCCATGATCTCCGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CTYSRPSALAWATSS*SVGERSKASMISAA Trigger: TGCAGCGGAGATCATGGACGCCTTTGATCGCTCGCCCACAGACAAGGAGCTGGTGGCCCAGGCTAAGGCACTAGGCCGGGAGTACGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CAA 90 bp | ACGAGCCAGTGGGAGCGGAAGCCAGGATCTGTGCTGACCACACACTaGAGGACATCCGTCCATCCACCACGCCTCCGAAGCCAGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSQWERKPGSVLTTH*RTSVHPPRLRSQVA Trigger: GGCTACCTGGCTTCGGAGGCGTGGTGGATGGACGGATGTCCTCAAGTGTGTGGTCAGCACAGATCCTGGCTTCCGCTCCCACTGGCTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000201863.4 |
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| CDS GCA 72 bp | ACAGGAAGAATGCTGCCTTCAGGAAGCGGCCAAAGCTaGAGAGCGTGGCCACGAGCCAGTGGGAGCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TGRMLPSGSGQS*RAWPRASGSGS Trigger: GCTTCCGCTCCCACTGGCTCGTGGCCACGCTCTGCAGCTTTGGCCGCTTCCTGAAGGCAGCATTCTTCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000201863.4 |
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| CDS CCA 72 bp | CAAACTCCCCCAGGCAGTCAACCAGGGCATGAACCATaGCAGGCTGAGCCTGCCGGACACAGTCCACCGCTA | + |
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Preference number: 6 (lower is better) Translates to: QTPPGSQPGHEP*QAEPAGHSPPL Trigger: TAGCGGTGGACTGTGTCCGGCAGGCTCAGCCTGCCATGGTTCATGCCCTGGTTGACTGCCTGGGGGAGTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 ENSMUST00000201863.4 |
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| CDS TCA 72 bp | GTGGGTCCATCTGGACCAAAACCTGAGCAGGACACCTaGGAGCCATCCACCACGCCTCCGAAGCCAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VGPSGPKPEQDT*EPSTTPPKPGS Trigger: GCTACCTGGCTTCGGAGGCGTGGTGGATGGCTCTCAGGTGTCCTGCTCAGGTTTTGGTCCAGATGGACCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS TCA 72 bp | GGGAACGGATGCTGTGGGTCCATCTGGACCAAAACCTaGGCAGGACACCTGAGAGCCATCCACCACGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GNGCCGSIWTKT*AGHLRAIHHAS Trigger: GGAGGCGTGGTGGATGGCTCTCAGGTGTCCTGCTCAGGTTTTGGTCCAGATGGACCCACAGCATCCGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS CAA 72 bp | CATCCACCACGCCTCCGAAGCCAGGTAGCCAAGGTCTaGCGTACAAACTCCCCCAGGCAGTCAACCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: HPPRLRSQVAKV*RTNSPRQSTRA Trigger: TGCCCTGGTTGACTGCCTGGGGGAGTTTGTACGCAAGACCTTGGCTACCTGGCTTCGGAGGCGTGGTGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000200888.2 ENSMUST00000201863.4 |
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| CDS CAA 72 bp | TGGGAGCGGAAGCCAGGATCTGTGCTGACCACACACTaGAGGACATCCGTCCATCCACCACGCCTCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: WERKPGSVLTTH*RTSVHPPRLRS Trigger: GCTTCGGAGGCGTGGTGGATGGACGGATGTCCTCAAGTGTGTGGTCAGCACAGATCCTGGCTTCCGCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027499.13 ENSMUST00000201863.4 |
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| CDS TCA 72 bp | GCTCCTTGTCTGTGGGCGAGCGATCAAAGGCGTCCATaGTCTCCGCTGCAAAGACAGAAGAGCGCCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: APCLWASDQRRP*SPLQRQKSAAA Trigger: TGCTGCGGCGCTCTTCTGTCTTTGCAGCGGAGATCATGGACGCCTTTGATCGCTCGCCCACAGACAAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027499.13 ENSMUST00000188394.2 ENSMUST00000201863.4 |
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| CDS CCA 72 bp | GAGGACATCCGTATAGGTGTTTGGGAACGGATGCTGTaGGTCCATCTGGACCAAAACCTGAGCAGGACACCT | + |
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Preference number: 6 (lower is better) Translates to: EDIRIGVWERML*VHLDQNLSRTP Trigger: AGGTGTCCTGCTCAGGTTTTGGTCCAGATGGACCCACAGCATCCGTTCCCAAACACCTATACGGATGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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| CDS CCA 72 bp | GCTGACCACACACTTGAGGACATCCGTATAGGTGTTTaGGAACGGATGCTGTGGGTCCATCTGGACCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: ADHTLEDIRIGV*ERMLWVHLDQN Trigger: GTTTTGGTCCAGATGGACCCACAGCATCCGTTCCCAAACACCTATACGGATGTCCTCAAGTGTGTGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200888.2 |
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