RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BOC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022687

Ensembl transcript IDs: ENSMUST00000114634.3

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCACCAAATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATaGTGGCCTTTGCTTTATCCCTGTGTTCTTCATGAACAGTGTGCT +
Preference number: 1 (lower is better)
Translates to: CHQIGVASRWLQSAA*WPLLYPCVLHEQCA
Trigger: AGCACACTGTTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATTTGGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR GCA 90 bp TTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTaGTTTATCCCTGTGTTCTTCATGAACAGTGTGCTTAGGGTCCTT +
Preference number: 1 (lower is better)
Translates to: LEWLPGGSSLRHDGL*FIPVFFMNSVLRVL
Trigger: AAGGACCCTAAGCACACTGTTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR CCA 90 bp ATGCTTAGAGTGCTGTACACATCTGGGGCTTTTCTCGTGACATCTTaGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: MLRVLYTSGAFLVTS*KPVLCHQIGVASRW
Trigger: CCACCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGATGTGTACAGCACTCTAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR TCA 90 bp GTGGTAGCTGCAGGTTCTGGGATCCATCTGCAGCCTGACCATCTATaGTACTCATTTCCACTGGTCTCCAGTTACTCAGCTGCTTGCTTT +
Preference number: 1 (lower is better)
Translates to: VVAAGSGIHLQPDHL*YSFPLVSSYSAACF
Trigger: AAAGCAAGCAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCCCAGAACCTGCAGCTACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR-3UTR GCA 90 bp TCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGCTCCAGTTACTCAGCTaGTTGCTTTCTGTCTTGTGC +
Preference number: 2 (lower is better)
Translates to: STKWPEGLLVSVVAAGSGLQLLS*LLSVLC
Trigger: GCACAAGACAGAAAGCAAGCAGCTGAGTAACTGGAG...CCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR-3UTR CCA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGGATACTCATTTCCACTaGTCTCCAGTTACTCAGCTG +
Preference number: 2 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLDTHFH*SPVTQL
Trigger: CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATC...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR-3UTR TCA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCCAGCCTGACCATCTATaGTACTCATTTCCACTGGTC +
Preference number: 2 (lower is better)
Translates to: GFSRDILETCPVPPNWSGQPDHL*YSFPLV
Trigger: GACCAGTGGAAATGAGTATCATAGATGGTCAGGCTG...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR-3UTR GCA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCAGTTACTCAGCTGCTTaGTTTCTGTCTTGTGCCAGA +
Preference number: 2 (lower is better)
Translates to: GFSRDILETCPVPPNWSGSYSAA*FLSCAR
Trigger: TCTGGCACAAGACAGAAAGCAAGCAGCTGAGTAACT...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR CAA 90 bp CCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGCTaGCTTTCTGTCTTGTGCCAGAAAGGGGAGGATTCCATATCTCTC +
Preference number: 2 (lower is better)
Translates to: PSMILISTGLQLLSC*LSVLCQKGEDSISL
Trigger: GAGAGATATGGAATCCTCCCCTTTCTGGCACAAGACAGAAAGCAAGCAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR CAA 90 bp CTCATTTCCACTGGTCTCCAGTTACTCAGCTGCTTGCTTTCTGTCTaGTGCCAGAAAGGGGAGGATTCCATATCTCTCCAGAATTATAGA +
Preference number: 2 (lower is better)
Translates to: LISTGLQLLSCLLSV*CQKGEDSISLQNYR
Trigger: TCTATAATTCTGGAGAGATATGGAATCCTCCCCTTTCTGGCACAAGACAGAAAGCAAGCAGCTGAGTAACTGGAGACCAGTGGAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR-3UTR GCA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGTTGCTTTCTGTCTTGTaGCAGAAAGGGGAGGATTCC +
Preference number: 2 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGLLSVL*QKGEDS
Trigger: GGAATCCTCCCCTTTCTGGCACAAGACAGAAAGCAA...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR-3UTR CAA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCATGCTTGCTTTCTGTCTaGTGCCAGAAAGGGGAGGAT +
Preference number: 3 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSACLLSV*CQKGED
Trigger: ATCCTCCCCTTTCTGGCACAAGACAGAAAGCAAGCA...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR CCA 72 bp CATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTaGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGC +
Preference number: 3 (lower is better)
Translates to: HLGNLSCATKLE*LPGGSSLRHDG
Trigger: GCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR CCA 72 bp CGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTaGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATG +
Preference number: 3 (lower is better)
Translates to: RDILETCPVPPN*SGFQVAPVCGM
Trigger: CATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR GCA 72 bp GGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTaGCACCAAATTGGAGTGGCTTCCAGGTGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: GAFLVTSWKPVL*HQIGVASRWLQ
Trigger: CTGGAGCCACCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR TCA 72 bp ATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATaGTGGCCTTTGCTTTATCCCTGTGTTCTTCATGAA +
Preference number: 3 (lower is better)
Translates to: IGVASRWLQSAA*WPLLYPCVLHE
Trigger: TTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR GCA 72 bp CTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTaGTTTATCCCTGTGTTCTTCATGAACAGTGTGCTT +
Preference number: 3 (lower is better)
Translates to: LPGGSSLRHDGL*FIPVFFMNSVL
Trigger: AAGCACACTGTTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR CCA 72 bp GTGCTGTACACATCTGGGGCTTTTCTCGTGACATCTTaGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCT +
Preference number: 3 (lower is better)
Translates to: VLYTSGAFLVTS*KPVLCHQIGVA
Trigger: AGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGATGTGTACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR-3UTR CAA 90 bp ATCTGGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGCAGTTACTCAGCTGCTaGCTTTCTGTCTTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: IWGFSRDILETCPVPPNWQLLSC*LSVLCQ
Trigger: CTGGCACAAGACAGAAAGCAAGCAGCTGAGTAACTG...CCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR TCA 72 bp GCAGGTTCTGGGATCCATCTGCAGCCTGACCATCTATaGTACTCATTTCCACTGGTCTCCAGTTACTCAGCT +
Preference number: 3 (lower is better)
Translates to: AGSGIHLQPDHL*YSFPLVSSYSA
Trigger: AGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCCCAGAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR TCA 72 bp TGCTTAGAGTGCTGTACACATCTGGGGCTTTTCTCGTaGCATCTTGGAAACCTGTCCTGTGCCACCAAATTG +
Preference number: 3 (lower is better)
Translates to: CLECCTHLGLFS*HLGNLSCATKL
Trigger: CAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGATGTGTACAGCACTCTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR GCA 72 bp TACTCATTTCCACTGGTCTCCAGTTACTCAGCTGCTTaGTTTCTGTCTTGTGCCAGAAAGGGGAGGATTCCA +
Preference number: 3 (lower is better)
Translates to: YSFPLVSSYSAA*FLSCARKGRIP
Trigger: TGGAATCCTCCCCTTTCTGGCACAAGACAGAAAGCAAGCAGCTGAGTAACTGGAGACCAGTGGAAATGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCACGGCTGCTCCCCTCATaGCGAGGCCGCCACACCAGC +
Preference number: 4 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSARLLPS*RGRHTS
Trigger: GCTGGTGTGGCGGCCTCGCCATGAGGGGAGCAGCCG...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGGGGGAGAGGCGGCCATaGTCAGGCTGGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: STKWPEGLLVSVVAAGSGGERRP*SGWLLL
Trigger: GAGCAGCAGCCAGCCTGACCATGGCCGCCTCTCCCC...CCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGGATAGGGCAGGTCGCTaGCCCGTGCCACCATGGCTC +
Preference number: 4 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWDRAGR*PVPPWL
Trigger: GAGCCATGGTGGCACGGGCCAGCGACCTGCCCTATC...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCAGCAGGTGGCAGGCAATaGCGGCTGTGTTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSAAGGRQ*RLCSPR
Trigger: ACGAGGGGAACACAGCCGTCATTGCCTGCCACCTGC...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGCCGGACCTGGGCTTTTaGGTGGCTCTCAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWPDLGF*VALRQV
Trigger: CACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGG...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCACTTCCAGTGGGTAGATaGTGCGGGCAGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSALPVGR*CGQPQQ
Trigger: CTGCTGAGGCTGCCCGCATCATCTACCCACTGGAAG...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp TGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCTCGAACCTCACAGGTaGGCTTTGCACTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: WPEGLLVSVVAAGSGIHLLEPHR*ALHSGP
Trigger: GGGGCCAGAGTGCAAAGCTCACCTGTGAGGTTCGAG...CAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCGTGCCACACACTaGTACCGTCCCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: STKWPEGLLVSVVAAGSGIRATH*YRPTVW
Trigger: CCACACTGTGGGACGGTACCAGTGTGTGGCACGGAT...CCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTGGCTAGCGTCACTGTaGCTGGCACACTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWWLASL*LAHWPQ
Trigger: CTGTGGCCAGTGTGCCAGCCACAGTGACGCTAGCCA...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCATGGGATGACCAGCTaGGACAGCTCCACCGTGACC +
Preference number: 4 (lower is better)
Translates to: WPEGLLVSVVAAGSGIHLHGMTS*DSSTVT
Trigger: GGTCACGGTGGAGCTGTCCCAGCTGGTCATCCCATG...CAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCACATCCTTGGCCCATGTaGCTCGAGGTGGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSAHPWPM*LEVVGF
Trigger: GAATCCCACCACCTCGAGTCACATGGGCCAAGGATG...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCACCATACATCGGTAGGTaGCTGAGTCCTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSAPYIGR*LSPPRW
Trigger: CCAGCGAGGAGGACTCAGGCACCTACCGATGTATGG...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGGTGAGCTTTGCACTCTaGCCCCATGGGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWVSFAL*PHGMTS
Trigger: GCTGGTCATCCCATGGGGCCAGAGTGCAAAGCTCAC...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGGGCGCTGGCTGGAGGTaGGGGGCACTGCATTCCTCA +
Preference number: 4 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLGAGWR*GALHSS
Trigger: TGAGGAATGCAGTGCCCCTCACCTCCAGCCAGCGCC...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATTGTAGAGGATGACTaGTGCCCCAGGATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: STKWPEGLLVSVVAAGSGIVEDD*CPRIPN
Trigger: GTTGGGGATCCTGGGGCAGCAGTCATCCTCTACAAT...CCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGTACCGTCCCACAGTGTaGTTGTTGAGGGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: STKWPEGLLVSVVAAGSGYRPTV*LLRAAM
Trigger: CATTGCTGCCCTCAACAACCACACTGTGGGACGGTA...CCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGGTTGGCTTGGTGACCTaGAAGTCCCTCCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWVGLVT*KSLQWH
Trigger: GTGCCATTGGAGGGACTTCCAGGTCACCAAGCCAAC...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGGGTGATGTAAGGTCCTaGCACGGGCCTCTCATATAC +
Preference number: 4 (lower is better)
Translates to: WPEGLLVSVVAAGSGIHLGDVRS*HGPLIY
Trigger: GTATATGAGAGGCCCGTGGCAGGACCTTACATCACC...CAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp CTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGGGACAGCCGGAGGCGCTaGCTGGAGGTGAGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LVTSWKPVLCHQIGVASRDSRRR*LEVRGT
Trigger: AGTGCCCCTCACCTCCAGCCAGCGCCTCCGGCTGTC...CCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp AATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTACAAGCCTGGTCAGGGTaGGGCGGTGCTGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NWSGFQVAPVCGMMAFALQAWSG*GGAGWL
Trigger: CAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTG...TAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGGCCTCAGTTGGCTGTTaGTGTCTTCCCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLASVGC*CLPAAG
Trigger: CCCAGCAGCGGGAAGACACCAACAGCCAACTGAGGC...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCAAGCACAGTTGTAGGCTaGCATCTCCACTTCGTACAA +
Preference number: 4 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSASTVVG*HLHFVQ
Trigger: TTGTACGAAGTGGAGATGGCAGCCTACAACTGTGCT...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp ATCTGGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGCAGGTCGCTGGCCCGTaGCACCATGGCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: IWGFSRDILETCPVPPNWQVAGP*HHGSSA
Trigger: GGCACTGGAGCCATGGTGGCACGGGCCAGCGACCTG...CCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGTGGCCCGTGCCACCATaGCTCCAGTGCCCACCGGCC +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLWPVPP*LQCPPA
Trigger: GGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCA...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp ATCTGGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGCACAGGCCCGTCCACTaGCGCCACCAAGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: IWGFSRDILETCPVPPNWHRPVH*RHQGRA
Trigger: AGCCCTACCTTGGTGGCGTCAGTGGACGGGCCTGTG...CCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGCATTGTCACTGTCTGTaGGTCGGTAGTAGATATAGA +
Preference number: 4 (lower is better)
Translates to: STKWPEGLLVSVVAAGSGHCHCL*VGSRYR
Trigger: TCTATATCTACTACCGACCCACAGACAGTGACAATG...CCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGACATGGGCTGGACTGTaGCCTGAGGAACCTCATTCA +
Preference number: 4 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLTWAGL*PEEPHS
Trigger: TGAATGAGGTTCCTCAGGTCACAGTCCAGCCCATGT...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGTCCTGCAGGCATCCGTaGCACACACTGGTACCGTCC +
Preference number: 4 (lower is better)
Translates to: SRDILETCPVPPNWSGFQSCRHP*HTLVPS
Trigger: GGACGGTACCAGTGTGTGGCACGGATGCCTGCAGGA...CTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGGTAGAGGATGACTGCTaGCCCAGGATCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SRDILETCPVPPNWSGFQVEDDC*PRIPNP
Trigger: GGGGTTGGGGATCCTGGGGCAGCAGTCATCCTCTAC...CTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGGTGTCTTCCCGCTGCTaGGCAAGCTCCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLVSSRC*ASSPGQ
Trigger: CTGCCCAGGGGAGCTTGCCCAGCAGCGGGAAGACAC...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp ATCTGGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGCTTGGAGGTCCGGGGTaGGCTGAGGATGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: IWGFSRDILETCPVPPNWLGGPG*AEDDRC
Trigger: GCACCTATCATCCTCAGCTCACCCCGGACCTCCAAG...CCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp CTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGGGAGCAGCTGGTGAGTTaGGTCATCAGGCAGCGTGTA +
Preference number: 4 (lower is better)
Translates to: LVTSWKPVLCHQIGVASREQLVS*VIRQRV
Trigger: TACACGCTGCCTGATGACTCAACTCACCAGCTGCTC...CCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCACAGCACTGGGGCCCTaGATGATATGGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GFSRDILETCPVPPNWSGTALGP*MIWRVP
Trigger: TGGGACCCTCCATATCATTCAGGGCCCCAGTGCTGT...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp AATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTACGGCACACTTGTACATaGCTTCGTCCTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: NWSGFQVAPVCGMMAFALRHTCT*LRPLGW
Trigger: CCAGCCAAGAGGACGAAGGCATGTACAAGTGTGCCG...TAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp AATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTAAGGTGGCTGATGGAGTaGCAGTACCTGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NWSGFQVAPVCGMMAFALRWLME*QYLSPS
Trigger: AGAAGGGGACAGGTACTGGCACTCCATCAGCCACCT...TAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCAGTTGGACCACAGCGTaGGCACTGCCAACCGCATTC +
Preference number: 4 (lower is better)
Translates to: GFSRDILETCPVPPNWSGSWTTA*ALPTAF
Trigger: GAATGCGGTTGGCAGTGCCCACGCTGTGGTCCAACT...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGGTCTGGAGGGTGGCATaGGGGGTGTGGCAGCAATCG +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLVWRVA*GVWQQS
Trigger: CGATTGCTGCCACACCCCCCATGCCACCCTCCAGAC...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGCTACGTAGTACAGGATaGGTGTCCGGCTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GAFLVTSWKPVLCHQIGVLRSTG*VSGCSP
Trigger: AGGGGAGCAGCCGGACACCCATCCTGTACTACGTAG...CACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp CTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGGTGCTGCTCTGGAGACTaGCACCAGGGTCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVTSWKPVLCHQIGVASRCCSGD*HQGHLS
Trigger: AGAGAGATGACCCTGGTGCCAGTCTCCAGAGCAGCA...CCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGGGCTGGCTGCTGCTCTaGAGACTGGCACCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLGWLLL*RLAPGS
Trigger: TGACCCTGGTGCCAGTCTCCAGAGCAGCAGCCAGCC...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp GGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGTCCTGTGTAGGTCCCTaGTGGATGCTGGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: GAFLVTSWKPVLCHQIGVSCVGP*WMLGTP
Trigger: TGGAGTTCCCAGCATCCATCAGGGACCTACACAGGA...CACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp CTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGGAAAGGACACATGAACTaGTGGGCTAGGCGAGAACCG +
Preference number: 4 (lower is better)
Translates to: LVTSWKPVLCHQIGVASRKGHMN*WARREP
Trigger: CGGTTCTCGCCTAGCCCATCAGTTCATGTGTCCTTT...CCTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCGATCCCCAACCCCATTaGTGGCCATACATCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GFSRDILETCPVPPNWSGDPQPH*WPYIGR
Trigger: CCTACCGATGTATGGCCAGCAATGGGGTTGGGGATC...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp CATGATGGCCTTTGCTTTATCCCTGTGTTCTTCATGAACAGTGTGCTTAGGGTCGGTCAGGCTGGCTGCTaGTCTGGAGACTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: HDGLCFIPVFFMNSVLRVGQAGC*SGDWHQ
Trigger: CTGGTGCCAGTCTCCAGAGCAGCAGCCAGCCTGACC...GACCCTAAGCACACTGTTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGTCTGTTGTGTGTTTCTaGTTAGACCAGGCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLSVVCF*LDQALH
Trigger: ATGGAGGGCCTGGTCTAAGCAGAAACACACAACAGA...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGTGGCTCTCAGGCAGGTaGCAGGCAATGACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLWLSGR*QAMTAV
Trigger: CACAGCCGTCATTGCCTGCCACCTGCCTGAGAGCCA...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGTTGGAGATTCCCGGATaGCATGATCAGGTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLLEIPG*HDQVVV
Trigger: GACAACTACCTGATCATGCCATCCGGGAATCTCCAA...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTGGTCTGGGCTTCCAGTaGGTAGATGATGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVGLGFQ*VDDAGS
Trigger: GCTGCCCGCATCATCTACCCACTGGAAGCCCAGACC...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGTCCAGTATGAGACTCTaGCCTTTGGTGACAATGACG +
Preference number: 4 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLSSMRL*PLVTMT
Trigger: CGTCATTGTCACCAAAGGCCAGAGTCTCATACTGGA...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTGTGACTCGAGGTGGTaGGATTCCACTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: GFSRDILETCPVPPNWSGCDSRW*DSTGHT
Trigger: TGTGTGGCCAGTGGAATCCCACCACCTCGAGTCACA...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTCCACGATCTCAGGTTTaGGCCGCCGTCCTGTTCGGA +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVPRSQV*AAVLFG
Trigger: TCCGAACAGGACGGCGGCCCAAACCTGAGATCGTGG...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTACAGAAGCTGTGGAGATaGTGGGTCTGTCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NWSGFQVAPVCGMMAFALQKLWR*WVCLEL
Trigger: AAGCTCCAGACAGACCCACCATCTCCACAGCTTCTG...TAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGCTGAGGCTTCCTGCCTaGACAGCCCACTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLLRLPA*TAHCSS
Trigger: GCTGCTACAGTGGGCTGTCCAGGCAGGAAGCCTCAG...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCCTGAGGCACACTaGGGACCTCTGGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVTPEAH*GPLATC
Trigger: GCAGGTTGCCAGAGGTCCCCAGTGTGCCTCAGGAGT...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTGGACATTGTAGAGGATaGCTGCTGCCCCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVGHCRG*LLPQDP
Trigger: GGGATCCTGGGGCAGCAGTCATCCTCTACAATGTCC...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGACTTCAATCACATGCTaGACATCTAATTTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWTSITC*TSNLKS
Trigger: GGACTTTAAATTAGATGTGCAGCATGTGATTGAAGT...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGGCTGAGGATGATAGGTaGCTCTGCAGGGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLAEDDR*LCRGYL
Trigger: CAGGTAGCCCCTGCAGAGGCACCTATCATCCTCAGC...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGTCTGCTGCTCCTTACTaGCCACGATCTCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GAFLVTSWKPVLCHQIGVSAAPY*PRSQVW
Trigger: CCAAACCTGAGATCGTGGCCAGTAAGGAGCAGCAGA...CACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCGGCTGGACTGTGACCTaGGGAACCTCATTCAAATCA +
Preference number: 4 (lower is better)
Translates to: GFSRDILETCPVPPNWSGGWTVT*GTSFKS
Trigger: TGATTTGAATGAGGTTCCTCAGGTCACAGTCCAGCC...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp TTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTTAATGCTTCCGCAGGGCTCTACGTaGCAGCCGGAGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FYRDMLPPIIDSGRLLMLPQGST*QPEALA
Trigger: AGCCAGCGCCTCCGGCTGTCACGTAGAGCCCTGCGG...AAGCATTAACAGTCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp TCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCTTCCAGGTTTCAAAGGACACATaGACTGATGGGCTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: SRDILETCPVPPNWSGFQVSKDT*TDGLGE
Trigger: CTCGCCTAGCCCATCAGTTCATGTGTCCTTTGAAAC...CTGGAAGCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTCTCACAGGTGAGCTTTaGACTCTGGCCCCATGGGAT +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVLTGEL*TLAPWD
Trigger: ATCCCATGGGGCCAGAGTGCAAAGCTCACCTGTGAG...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp ATCTGGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGTCTCTCTGGATCTGCTaGTCCTTACTGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: IWGFSRDILETCPVPPNWSLWIC*SLLATI
Trigger: GATCGTGGCCAGTAAGGAGCAGCAGATCCAGAGAGA...CCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp CATGATGGCCTTTGCTTTATCCCTGTGTTCTTCATGAACAGTGTGCTTAGGGTCGGGGGTCTTCCAGGCTaGCCAGAAAATTTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: HDGLCFIPVFFMNSVLRVGGLPG*PENFRA
Trigger: AGCTCGGAAATTTTCTGGTCAGCCTGGAAGACCCCC...GACCCTAAGCACACTGTTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGATCAGCAAGGCAGCCTaGTGTGGCCATGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLISKAA*CGHENP
Trigger: TGGATTCTCATGGCCACAGCAGGCTGCCTTGCTGAT...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTGCTGGTTGGCTGGAATaGCAGAAATGGTCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVAGWLE*QKWSSR
Trigger: ACGACTGGACCATTTCTGGCATTCCAGCCAACCAGC...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGGGACCTCTGGCAACCTaGTGGTTCTGGAGGTCATAT +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLGPLAT*WFWRSY
Trigger: ATATGACCTCCAGAACCAGCAGGTTGCCAGAGGTCC...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTTTCTCAGCCATGCACTaGTACACGCCTTCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVFSAMH*YTPSSS
Trigger: AGAGGACGAAGGCGTGTACCAGTGCATGGCTGAGAA...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTAATAGAAGCCATGGATTaGGGTGTTGTTGTTACTGGC +
Preference number: 4 (lower is better)
Translates to: NWSGFQVAPVCGMMAFALIEAMD*GVVVTG
Trigger: GCCAGTAACAACAACACCCCAATCCATGGCTTCTAT...TAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGAACGGCCACTGTAGCCTaGCACCACGTAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRTATVA*HHVGPG
Trigger: TCCCGGCCCTACGTGGTGTCAGGCTACAGTGGCCGT...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTTGGAAGTCCCTCCAATaGCACCATTGTGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVWKSLQ*HHCVLA
Trigger: TGCCAGTACACAATGGTGCCATTGGAGGGACTTCCA...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
3UTR CAA 72 bp ATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGCTaGCTTTCTGTCTTGTGCCAGAAAGGGGAGGATTCC +
Preference number: 4 (lower is better)
Translates to: ILISTGLQLLSC*LSVLCQKGEDS
Trigger: GGAATCCTCCCCTTTCTGGCACAAGACAGAAAGCAAGCAGCTGAGTAACTGGAGACCAGTGGAAATGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTGGCTGGCACACTaGCCACAGCTCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRLWLAH*PQLLQA
Trigger: TGCCTGCAGGAGCTGTGGCCAGTGTGCCAGCCACAG...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGCGGCCATGGTCAGGCTaGCTGCTGCTCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGRPWSG*LLLWRL
Trigger: CAGTCTCCAGAGCAGCAGCCAGCCTGACCATGGCCG...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp TTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTTAATGCTTCCAGCCACTCCTGTTTaGCACTGTACCGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FYRDMLPPIIDSGRLLMLPATPV*HCTGPG
Trigger: CCCAGGTCCGGTACAGTGTCAAACAGGAGTGGCTGG...AAGCATTAACAGTCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp TTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTTAATGCTTACATCGGTAGGTGCCTaGGTCCTCCTCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FYRDMLPPIIDSGRLLMLTSVGA*VLLAGG
Trigger: ACCACCAGCGAGGAGGACTCAGGCACCTACCGATGT...AAGCATTAACAGTCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGGCATCTGGTCAGGTCTaGTGGGTCTGGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGASGQV*WVWRVA
Trigger: TGCCACCCTCCAGACCCAGCAGACCTGACCAGATGC...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp GGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGTCTAATTTAAAGTCCTaGAGATTGGCTAGCGTCACT +
Preference number: 4 (lower is better)
Translates to: GAFLVTSWKPVLCHQIGVSNLKS*RLASVT
Trigger: AGTGACGCTAGCCAATCTCCAGGACTTTAAATTAGA...CACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGATCTGGTCAGGTCTGCTaGGTCTGGAGGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRSGQVC*VWRVAW
Trigger: CCATGCCACCCTCCAGACCCAGCAGACCTGACCAGA...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGGGGTGTTGTTGTTACTaGCTGGGATATACATCCACT +
Preference number: 4 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLGCCCY*LGYTST
Trigger: AGTGGATGTATATCCCAGCCAGTAACAACAACACCC...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGAGTTCCTCCCAGCTTCTaGACAGTGGACATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRVPPSF*TVDMGW
Trigger: CCAGCCCATGTCCACTGTCCAGAAGCTGGGAGGAAC...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACCATGTGACTCGAGGTaGTGGGATTCCACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRPCDSR*WDSTGH
Trigger: GTGGCCAGTGGAATCCCACCACCTCGAGTCACATGG...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGAAGGGTGAGGCGGTGCTaGTTGGCTGGAATGCCAGAA +
Preference number: 4 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRRVRRC*LAGMPE
Trigger: TTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCT...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTTAATGCTTACACTGTACCGGACCTaGGCTTTTGGGTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FYRDMLPPIIDSGRLLMLTLYRT*AFGWLS
Trigger: TGAGAGCCACCCAAAAGCCCAGGTCCGGTACAGTGT...AAGCATTAACAGTCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR TCA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGCCTCTTGGCTGGCATTaGCAATTTGGAGATTCCCGG +
Preference number: 4 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGPLGWH*QFGDSR
Trigger: CCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGG...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGGAATGCCAGAAATaGTCCAGTCGTCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRLECQK*SSRQRS
Trigger: ACTCCTCTGACGACTGGACCATTTCTGGCATTCCAG...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CCA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGCTGGCATTGACAATTTaGAGATTCCCGGATGGCATG +
Preference number: 4 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGLALTI*RFPDGM
Trigger: CATGCCATCCGGGAATCTCCAAATTGTCAATGCCAG...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR GCA 90 bp TTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTTAATGCTTAGTGGTCTCATTGACTaGATCAGTGAAGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: FYRDMLPPIIDSGRLLMLSGLID*ISEGDV
Trigger: TACATCACCTTCACTGATGCAGTCAATGAGACCACT...AAGCATTAACAGTCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 90 bp GCCTTCGTCCTCTGGCCCAACACTGACCACCCGCAGGGCTCTACGTaGCAGCCGGAGGCGCTGGCTGGAGGTGAGGGGCACTGCATTCCT +
Preference number: 5 (lower is better)
Translates to: AFVLWPNTDHPQGST*QPEALAGGEGHCIP
Trigger: AGGAATGCAGTGCCCCTCACCTCCAGCCAGCGCCTCCGGCTGTCACGTAGAGCCCTGCGGGTGGTCAGTGTTGGGCCAGAGGACGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp CGCTGGCCCGTGCCACCATGGCTCCAGTGCCCACCGGCCGTTCCATaGTTTCTAGGGGCGGAGGCTGTGGTGGAGCTAGAGTCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: RWPVPPWLQCPPAVP*FLGAEAVVELESRV
Trigger: CACCCTTGACTCTAGCTCCACCACAGCCTCCGCCCCTAGAAACCATGGAACGGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp CAATCAGATAGGGCAGGTCGCTGGCCCGTGCCACCATGGCTCCAGTaGCCACCGGCCGTTCCATGGTTTCTAGGGGCGGAGGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: QSDRAGRWPVPPWLQ*PPAVPWFLGAEAVV
Trigger: CACCACAGCCTCCGCCCCTAGAAACCATGGAACGGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCAGCGACCTGCCCTATCTGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp GGCAGCAATCGGCTTGGTATCCCTCCCGGGTCTCAGGGTTGTGTCTaGCCGGGCGGTCCTCAGTTGGACCACAGCGTGGGCACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: GSNRLGIPPGSQGCV*PGGPQLDHSVGTAN
Trigger: GTTGGCAGTGCCCACGCTGTGGTCCAACTGAGGACCGCCCGGCCAGACACAACCCTGAGACCCGGGAGGGATACCAAGCCGATTGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp CAACCCCGACAATCAGATAGGGCAGGTCGCTGGCCCGTGCCACCATaGCTCCAGTGCCCACCGGCCGTTCCATGGTTTCTAGGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: QPRQSDRAGRWPVPP*LQCPPAVPWFLGAE
Trigger: CTCCGCCCCTAGAAACCATGGAACGGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCAGCGACCTGCCCTATCTGATTGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 90 bp GTAAGGTCCTGCCACGGGCCTCTCATATACACGGCCACTGTAGCCTaGCACCACGTAGGGCCGGGAGGGAGCACTGGGCTCACTCTCCCC +
Preference number: 5 (lower is better)
Translates to: VRSCHGPLIYTATVA*HHVGPGGSTGLTLP
Trigger: GGGGAGAGTGAGCCCAGTGCTCCCTCCCGGCCCTACGTGGTGTCAGGCTACAGTGGCCGTGTATATGAGAGGCCCGTGGCAGGACCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGACCGGACCTGGGCTTTaGGGTGGCTCTCAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WPEGLLVSVVAAGSGIHLTGPGL*GGSQAG
Trigger: ACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGT...CAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp CCAACACTGACCACCCGCAGGGCTCTACGTGACAGCCGGAGGCGCTaGCTGGAGGTGAGGGGCACTGCATTCCTCAGCCATAGTACAGAG +
Preference number: 5 (lower is better)
Translates to: PTLTTRRALRDSRRR*LEVRGTAFLSHSTE
Trigger: CTCTGTACTATGGCTGAGGAATGCAGTGCCCCTCACCTCCAGCCAGCGCCTCCGGCTGTCACGTAGAGCCCTGCGGGTGGTCAGTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TGGACCACAGCGTGGGCACTGCCAACCGCATTCTCAGCCATGCACTaGTACACGCCTTCGTCCTCTGGCCCAACACTGACCACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: WTTAWALPTAFSAMH*YTPSSSGPTLTTRR
Trigger: CCTGCGGGTGGTCAGTGTTGGGCCAGAGGACGAAGGCGTGTACCAGTGCATGGCTGAGAATGCGGTTGGCAGTGCCCACGCTGTGGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp CTCAGGGTTGTGTCTGGCCGGGCGGTCCTCAGTTGGACCACAGCGTaGGCACTGCCAACCGCATTCTCAGCCATGCACTGGTACACGCCT +
Preference number: 5 (lower is better)
Translates to: LRVVSGRAVLSWTTA*ALPTAFSAMHWYTP
Trigger: AGGCGTGTACCAGTGCATGGCTGAGAATGCGGTTGGCAGTGCCCACGCTGTGGTCCAACTGAGGACCGCCCGGCCAGACACAACCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp GTTCCCGAAGCATCTGGTCAGGTCTGCTGGGTCTGGAGGGTGGCATaGGGGGTGTGGCAGCAATCGGCTTGGTATCCCTCCCGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: VPEASGQVCWVWRVA*GVWQQSAWYPSRVS
Trigger: TGAGACCCGGGAGGGATACCAAGCCGATTGCTGCCACACCCCCCATGCCACCCTCCAGACCCAGCAGACCTGACCAGATGCTTCGGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp TTGTGTCTGGCCGGGCGGTCCTCAGTTGGACCACAGCGTGGGCACTaGCAACCGCATTCTCAGCCATGCACTGGTACACGCCTTCGTCCT +
Preference number: 5 (lower is better)
Translates to: LCLAGRSSVGPQRGH*QPHSQPCTGTRLRP
Trigger: AGGACGAAGGCGTGTACCAGTGCATGGCTGAGAATGCGGTTGGCAGTGCCCACGCTGTGGTCCAACTGAGGACCGCCCGGCCAGACACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp GTCCGGGGTGAGCTGAGGATGATAGGTGCCTCTGCAGGGGCTACCTaGTCTTCTCCCGGGCACTTCAGGGAAGTAGGCTGTACCGACGAC +
Preference number: 5 (lower is better)
Translates to: VRGELRMIGASAGAT*SSPGHFREVGCTDD
Trigger: GTCGTCGGTACAGCCTACTTCCCTGAAGTGCCCGGGAGAAGAGCAGGTAGCCCCTGCAGAGGCACCTATCATCCTCAGCTCACCCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp GGCCTCCAGCCACTCCTGTTTGACACTGTACCGGACCTGGGCTTTTaGGTGGCTCTCAGGCAGGTGGCAGGCAATGACGGCTGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GLQPLLFDTVPDLGF*VALRQVAGNDGCVP
Trigger: GGGAACACAGCCGTCATTGCCTGCCACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGTACAGTGTCAAACAGGAGTGGCTGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGTCCAGCCACTCCTGTTaGACACTGTACCGGACCTGG +
Preference number: 5 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWSSHSC*TLYRTW
Trigger: CCAGGTCCGGTACAGTGTCAAACAGGAGTGGCTGGA...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGGTGAGGCGGTGCTGGTaGGCTGGAATGCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: WPEGLLVSVVAAGSGIHLVRRCW*AGMPEM
Trigger: CATTTCTGGCATTCCAGCCAACCAGCACCGCCTCAC...CAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGGCATGTGGTGACGGGTaGCTTCTGGAGGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWACGDG*LLEVTA
Trigger: TGCTGTCACCTCCAGAAGCAACCCGTCACCACATGC...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp TGGCTGCTGCTCTGGAGACTGGCACCAGGGTCATCTCTCTGGATCTaGTGCTCCTTACTGGCCACGATCTCAGGTTTGGGCCGCCGTCCT +
Preference number: 5 (lower is better)
Translates to: WLLLWRLAPGSSLWI*CSLLATISGLGRRP
Trigger: AGGACGGCGGCCCAAACCTGAGATCGTGGCCAGTAAGGAGCAGCAGATCCAGAGAGATGACCCTGGTGCCAGTCTCCAGAGCAGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TCCAGCCACTCCTGTTTGACACTGTACCGGACCTGGGCTTTTGGGTaGCTCTCAGGCAGGTGGCAGGCAATGACGGCTGTGTTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: SSHSCLTLYRTWAFG*LSGRWQAMTAVFPS
Trigger: CGAGGGGAACACAGCCGTCATTGCCTGCCACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGTACAGTGTCAAACAGGAGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TATGAGACTCTGGCCTTTGGTGACAATGACGGTCTGGGCTTCCAGTaGGTAGATGATGCGGGCAGCCTCAGCAGTGGACCGGCGCACGCG +
Preference number: 5 (lower is better)
Translates to: YETLAFGDNDGLGFQ*VDDAGSLSSGPAHA
Trigger: CGCGTGCGCCGGTCCACTGCTGAGGCTGCCCGCATCATCTACCCACTGGAAGCCCAGACCGTCATTGTCACCAAAGGCCAGAGTCTCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp ACCTCACAGGTGAGCTTTGCACTCTGGCCCCATGGGATGACCAGCTaGGACAGCTCCACCGTGACCTCAGGGGGTTCGAACACCTGGACA +
Preference number: 5 (lower is better)
Translates to: TSQVSFALWPHGMTS*DSSTVTSGGSNTWT
Trigger: TGTCCAGGTGTTCGAACCCCCTGAGGTCACGGTGGAGCTGTCCCAGCTGGTCATCCCATGGGGCCAGAGTGCAAAGCTCACCTGTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TCAGGCTGGCTGCTGCTCTGGAGACTGGCACCAGGGTCATCTCTCTaGATCTGCTGCTCCTTACTGGCCACGATCTCAGGTTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SGWLLLWRLAPGSSL*ICCSLLATISGLGR
Trigger: GCGGCCCAAACCTGAGATCGTGGCCAGTAAGGAGCAGCAGATCCAGAGAGATGACCCTGGTGCCAGTCTCCAGAGCAGCAGCCAGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCACGTCCCACAGTGTGGTaGTTGAGGGCAGCAATGACA +
Preference number: 5 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSARPTVW*LRAAMT
Trigger: TGTCATTGCTGCCCTCAACAACCACACTGTGGGACG...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TGGCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCTTAACAAGCCCCGGTaGTTCCCGAAGCATCTGGTC +
Preference number: 5 (lower is better)
Translates to: WPEGLLVSVVAAGSGIHLLNKPR*FPKHLV
Trigger: GACCAGATGCTTCGGGAACAACCGGGGCTTGTTAAG...CAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp CTGCTGCTCTGGAGACTGGCACCAGGGTCATCTCTCTGGATCTGCTaGTCCTTACTGGCCACGATCTCAGGTTTGGGCCGCCGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LLLWRLAPGSSLWIC*SLLATISGLGRRPV
Trigger: AACAGGACGGCGGCCCAAACCTGAGATCGTGGCCAGTAAGGAGCAGCAGATCCAGAGAGATGACCCTGGTGCCAGTCTCCAGAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp GCTCCTGCAGGCATCCGTGCCACACACTGGTACCGTCCCACAGTGTaGTTGTTGAGGGCAGCAATGACAAGGGTCCCACGGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: APAGIRATHWYRPTV*LLRAAMTRVPRVMK
Trigger: CTTCATCACCCGTGGGACCCTTGTCATTGCTGCCCTCAACAACCACACTGTGGGACGGTACCAGTGTGTGGCACGGATGCCTGCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TCTCTAGAGGCCTCCAGCCACTCCTGTTTGACACTGTACCGGACCTaGGCTTTTGGGTGGCTCTCAGGCAGGTGGCAGGCAATGACGGCT +
Preference number: 5 (lower is better)
Translates to: SLEASSHSCLTLYRT*AFGWLSGRWQAMTA
Trigger: AGCCGTCATTGCCTGCCACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGTACAGTGTCAAACAGGAGTGGCTGGAGGCCTCTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp CACGGCCACTGTAGCCTGACACCACGTAGGGCCGGGAGGGAGCACTaGGCTCACTCTCCCCTAACATGTTCAAAGCACGAACTCGGAACT +
Preference number: 5 (lower is better)
Translates to: HGHCSLTPRRAGREH*AHSPLTCSKHELGT
Trigger: AGTTCCGAGTTCGTGCTTTGAACATGTTAGGGGAGAGTGAGCCCAGTGCTCCCTCCCGGCCCTACGTGGTGTCAGGCTACAGTGGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp GCCCGAGGGCCTCCTGGTGTCCGTGGTAGCTGCAGGTTCTGGGATCCATCTGCAATGAGACTCTGGCCTTaGGTGACAATGACGGTCTGG +
Preference number: 5 (lower is better)
Translates to: ARGPPGVRGSCRFWDPSAMRLWP*VTMTVW
Trigger: CCAGACCGTCATTGTCACCAAAGGCCAGAGTCTCAT...TGCAGATGGATCCCAGAACCTGCAGCTACCACGGACACCAGGAGGCCCTCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp GCTTCCAGGGTCAAGCCTGGTCAGGGTGAGGCGGTGCTGGTTGGCTaGAATGCCAGAAATGGTCCAGTCGTCAGAGGAGTTCGTGACCTT +
Preference number: 5 (lower is better)
Translates to: ASRVKPGQGEAVLVG*NARNGPVVRGVRDL
Trigger: AAGGTCACGAACTCCTCTGACGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGACCCTGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp AAGGTAGGGCTGCCCGTTGGCTTGGTGACCTGGAAGTCCCTCCAATaGCACCATTGTGTACTGGCACGAAGAAGACAGGAGGGCACTCCG +
Preference number: 5 (lower is better)
Translates to: KVGLPVGLVTWKSLQ*HHCVLARRRQEGTP
Trigger: CGGAGTGCCCTCCTGTCTTCTTCGTGCCAGTACACAATGGTGCCATTGGAGGGACTTCCAGGTCACCAAGCCAACGGGCAGCCCTACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 90 bp CCATCTCCACTTCGTACAAGCTTCCAGGGTCAAGCCTGGTCAGGGTaGGGCGGTGCTGGTTGGCTGGAATGCCAGAAATGGTCCAGTCGT +
Preference number: 5 (lower is better)
Translates to: PSPLRTSFQGQAWSG*GGAGWLECQKWSSR
Trigger: ACGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGACCCTGGAAGCTTGTACGAAGTGGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp ACTTCGTACAAGCTTCCAGGGTCAAGCCTGGTCAGGGTGAGGCGGTaGTGGTTGGCTGGAATGCCAGAAATGGTCCAGTCGTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: TSYKLPGSSLVRVRR*WLAGMPEMVQSSEE
Trigger: CTCCTCTGACGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGACCCTGGAAGCTTGTACGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp GAAGGTGACCATAGCTGTCTGGCCCTCGCCAGCACAGTTGTAGGCTaGCATCTCCACTTCGTACAAGCTTCCAGGGTCAAGCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: EGDHSCLALASTVVG*HLHFVQASRVKPGQ
Trigger: CTGACCAGGCTTGACCCTGGAAGCTTGTACGAAGTGGAGATGGCAGCCTACAACTGTGCTGGCGAGGGCCAGACAGCTATGGTCACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp GCAACCTGCTGGTTCTGGAGGTCATATCCGTTGCTAACAATGGGCTaGCTCAGTTGGCTGTTGGTGTCTTCCCGCTGCTGGGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: ATCWFWRSYPLLTMG*LSWLLVSSRCWASS
Trigger: GGAGCTTGCCCAGCAGCGGGAAGACACCAACAGCCAACTGAGGCAGCCCATTGTTAGCAACGGATATGACCTCCAGAACCAGCAGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp GGCAGCAATGCTGGACCCATCCTTGGCCCATGTGACTCGAGGTGGTaGGATTCCACTGGCCACACACTCCAGTATGAGACTCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GSNAGPILGPCDSRW*DSTGHTLQYETLAF
Trigger: AAAGGCCAGAGTCTCATACTGGAGTGTGTGGCCAGTGGAATCCCACCACCTCGAGTCACATGGGCCAAGGATGGGTCCAGCATTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp ATAGGCAGCAATGCTGGACCCATCCTTGGCCCATGTGACTCGAGGTaGTGGGATTCCACTGGCCACACACTCCAGTATGAGACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: IGSNAGPILGPCDSR*WDSTGHTLQYETLA
Trigger: GGCCAGAGTCTCATACTGGAGTGTGTGGCCAGTGGAATCCCACCACCTCGAGTCACATGGGCCAAGGATGGGTCCAGCATTGCTGCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TCGTACAAGCTTCCAGGGTCAAGCCTGGTCAGGGTGAGGCGGTGCTaGTTGGCTGGAATGCCAGAAATGGTCCAGTCGTCAGAGGAGTTC +
Preference number: 5 (lower is better)
Translates to: SYKLPGSSLVRVRRC*LAGMPEMVQSSEEF
Trigger: GAACTCCTCTGACGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGACCCTGGAAGCTTGTACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TCCACTGACGCCACCAAGGTAGGGCTGCCCGTTGGCTTGGTGACCTaGAAGTCCCTCCAATGGCACCATTGTGTACTGGCACGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: STDATKVGLPVGLVT*KSLQWHHCVLARRR
Trigger: TCTTCTTCGTGCCAGTACACAATGGTGCCATTGGAGGGACTTCCAGGTCACCAAGCCAACGGGCAGCCCTACCTTGGTGGCGTCAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 90 bp GTTCCTCCCAGCTTCTGGACAGTGGACATGGGCTGGACTGTGACCTaGGGAACCTCATTCAAATCAGCAAGGCAGCCTGCTGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: VPPSFWTVDMGWTVT*GTSFKSARQPAVAM
Trigger: CATGGCCACAGCAGGCTGCCTTGCTGATTTGAATGAGGTTCCTCAGGTCACAGTCCAGCCCATGTCCACTGTCCAGAAGCTGGGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp TTGACACTGTACCGGACCTGGGCTTTTGGGTGGCTCTCAGGCAGGTaGCAGGCAATGACGGCTGTGTTCCCCTCGTCTACTTCAATCACA +
Preference number: 5 (lower is better)
Translates to: LTLYRTWAFGWLSGR*QAMTAVFPSSTSIT
Trigger: TGTGATTGAAGTAGACGAGGGGAACACAGCCGTCATTGCCTGCCACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGTACAGTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 90 bp CCCAGGATCCCCAACCCCATTGCTGGCCATACATCGGTAGGTGCCTaGGTCCTCCTCGCTGGTGGTGTCAATAAGCAAATTACTCAGCAG +
Preference number: 5 (lower is better)
Translates to: PRIPNPIAGHTSVGA*VLLAGGVNKQITQQ
Trigger: CTGCTGAGTAATTTGCTTATTGACACCACCAGCGAGGAGGACTCAGGCACCTACCGATGTATGGCCAGCAATGGGGTTGGGGATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp AAGAAAGCTCCTACTCCTGAGGCACACTGGGGACCTCTGGCAACCTaGTGGTTCTGGAGGTCATATCCGTTGCTAACAATGGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: KKAPTPEAHWGPLAT*WFWRSYPLLTMGCL
Trigger: GAGGCAGCCCATTGTTAGCAACGGATATGACCTCCAGAACCAGCAGGTTGCCAGAGGTCCCCAGTGTGCCTCAGGAGTAGGAGCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp AAAGCTCCTACTCCTGAGGCACACTGGGGACCTCTGGCAACCTGCTaGTTCTGGAGGTCATATCCGTTGCTAACAATGGGCTGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: KAPTPEAHWGPLATC*FWRSYPLLTMGCLS
Trigger: ACTGAGGCAGCCCATTGTTAGCAACGGATATGACCTCCAGAACCAGCAGGTTGCCAGAGGTCCCCAGTGTGCCTCAGGAGTAGGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AGTGTGCTTAGGGTCCTTCCACCAAGTGGCCCGAGGGCCTCCTGGTGTCCGTGGGGGATATACATCCACTaGAGCATAATAGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: SVLRVLPPSGPRASWCPWGIYIH*SIIVVS
Trigger: TGAGACCACTATTATGCTCAAGTGGATGTATATCCC...CCACGGACACCAGGAGGCCCTCGGGCCACTTGGTGGAAGGACCCTAAGCACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 90 bp GGTTGGCTGGAATGCCAGAAATGGTCCAGTCGTCAGAGGAGTTCGTaGCCTTACGATGCTTCACTACGTAGTACAGGATGGGTGTCCGGC +
Preference number: 5 (lower is better)
Translates to: GWLECQKWSSRQRSS*PYDASLRSTGWVSG
Trigger: GCCGGACACCCATCCTGTACTACGTAGTGAAGCATCGTAAGGTCACGAACTCCTCTGACGACTGGACCATTTCTGGCATTCCAGCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 90 bp GCCTTCGTCCTCTTGGCTGGCATTGACAATTTGGAGATTCCCGGATaGCATGATCAGGTAGTTGTCTCTAGAGGCCTCCAGCCACTCCTG +
Preference number: 5 (lower is better)
Translates to: AFVLLAGIDNLEIPG*HDQVVVSRGLQPLL
Trigger: CAGGAGTGGCTGGAGGCCTCTAGAGACAACTACCTGATCATGCCATCCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGGACGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp GGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGATGCTGGACCCATCCTaGGCCCATGTGACTCGAGGT +
Preference number: 5 (lower is better)
Translates to: GAFLVTSWKPVLCHQIGVMLDPS*AHVTRG
Trigger: ACCTCGAGTCACATGGGCCAAGGATGGGTCCAGCAT...CACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp CATGATGGCCTTTGCTTTATCCCTGTGTTCTTCATGAACAGTGTGCTTAGGGTCGCCACGATCTCAGGTTaGGGCCGCCGTCCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: HDGLCFIPVFFMNSVLRVATISG*GRRPVR
Trigger: CCGAACAGGACGGCGGCCCAAACCTGAGATCGTGGC...GACCCTAAGCACACTGTTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATCCCTGCCATGGATTGGGGTGTaGTTGTTACTGGCTGGGATA +
Preference number: 5 (lower is better)
Translates to: SGFQVAPVCGMMAFALSLPWIGV*LLLAGI
Trigger: TATCCCAGCCAGTAACAACAACACCCCAATCCATGG...CAGGGATAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp ATCTGGGGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGTCGCCTCACTGCTGTTaGGCATGTGGTGACGGGTTG +
Preference number: 5 (lower is better)
Translates to: IWGFSRDILETCPVPPNWSPHCC*ACGDGL
Trigger: CAACCCGTCACCACATGCCAAACAGCAGTGAGGCGA...CCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp CATGATGGCCTTTGCTTTATCCCTGTGTTCTTCATGAACAGTGTGCTTAGGGTCCCCACAGTGTGGTTGTaGAGGGCAGCAATGACAAGG +
Preference number: 5 (lower is better)
Translates to: HDGLCFIPVFFMNSVLRVPTVWL*RAAMTR
Trigger: CCTTGTCATTGCTGCCCTCAACAACCACACTGTGGG...GACCCTAAGCACACTGTTCATGAAGAACACAGGGATAAAGCAAAGGCCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AATTGGAGTGGCTTCCAGGTGGCTCCAGTCTGCGGCATGATGGCCTTTGCTTTATATAGAAGCCATGGATaGGGGTGTTGTTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: NWSGFQVAPVCGMMAFALYRSHG*GCCCYW
Trigger: CCAGTAACAACAACACCCCAATCCATGGCTTCTATA...TAAAGCAAAGGCCATCATGCCGCAGACTGGAGCCACCTGGAAGCCACTCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTTCGCAGATCATGACATaGCTGAACTCGCTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVSQIMT*LNSLSP
Trigger: AGGGGAGAGCGAGTTCAGCAATGTCATGATCTGCGA...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 90 bp GGCTGGGATATACATCCACTTGAGCATAATAGTGGTCTCATTGACTaGATCAGTGAAGGTGATGTAAGGTCCTGCCACGGGCCTCTCATA +
Preference number: 5 (lower is better)
Translates to: GWDIHPLEHNSGLID*ISEGDVRSCHGPLI
Trigger: TATGAGAGGCCCGTGGCAGGACCTTACATCACCTTCACTGATGCAGTCAATGAGACCACTATTATGCTCAAGTGGATGTATATCCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTACTCAGCTGGCTGGCATTGACAATTaGGAGATTCCCGGATGGCAT +
Preference number: 5 (lower is better)
Translates to: CSLTIYDTHFHWSPVTQLAGIDN*EIPGWH
Trigger: ATGCCATCCGGGAATCTCCAAATTGTCAATGCCAGC...CAGCTGAGTAACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp GGATCCATCTGCAGCCTGACCATCTATGATACTCATTTCCACTGGTCTCCAGTTTCCTCTTGGCTGGCATaGACAATTTGGAGATTCCCG +
Preference number: 5 (lower is better)
Translates to: GSICSLTIYDTHFHWSPVSSWLA*TIWRFP
Trigger: CGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGGA...AACTGGAGACCAGTGGAAATGAGTATCATAGATGGTCAGGCTGCAGATGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGAGGGCTGCCCGTTGGCTaGGTGACCTGGAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRGLPVG*VTWKSL
Trigger: GAGGGACTTCCAGGTCACCAAGCCAACGGGCAGCCC...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 90 bp ACTTCTTCAACTGGTACAAGACCTAAACAGCACTGGGGCCCTGAATaGTATGGAGGGTCCCATGAAGATTCTAGTCCAGGACTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: TSSTGTRPKQHWGPE*YGGSHEDSSPGLSD
Trigger: GTCTGAAAGTCCTGGACTAGAATCTTCATGGGACCCTCCATATCATTCAGGGCCCCAGTGCTGTTTAGGTCTTGTACCAGTTGAAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGGTGGCAGCAATCGGCTaGGTATCCCTCCCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGVAAIG*VSLPGL
Trigger: GAGACCCGGGAGGGATACCAAGCCGATTGCTGCCAC...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp GGCTTTTCTCGTGACATCTTGGAAACCTGTCCTGTGCCACCAAATTGGAGTGGCATAATAGTGGTCTCATaGACTGCATCAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GFSRDILETCPVPPNWSGIIVVS*TASVKV
Trigger: CACCTTCACTGATGCAGTCAATGAGACCACTATTAT...GCCACTCCAATTTGGTGGCACAGGACAGGTTTCCAAGATGTCACGAGAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTTAATGCTTTGCCTCAGTTGGCTGTaGGTGTCTTCCCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FYRDMLPPIIDSGRLLMLCLSWL*VSSRCW
Trigger: CCAGCAGCGGGAAGACACCAACAGCCAACTGAGGCA...AAGCATTAACAGTCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGGTCTCCTCCACCCACTaGGCAGGAGTCAGAACTGTC +
Preference number: 5 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGVSSTH*AGVRTV
Trigger: GACAGTTCTGACTCCTGCCAAGTGGGTGGAGGAGAC...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACCTCCAATGGCACCATaGTGTACTGGCACGAAGAAG +
Preference number: 5 (lower is better)
Translates to: YSVCFYRDMLPPIIDSGRPPMAP*CTGTKK
Trigger: CTTCTTCGTGCCAGTACACAATGGTGCCATTGGAGG...TCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp TTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGAGACTGTTAATGCTTTGGATTGGGGTGTTGTaGTTACTGGCTGGGATATAC +
Preference number: 5 (lower is better)
Translates to: FYRDMLPPIIDSGRLLMLWIGVL*LLAGIY
Trigger: GTATATCCCAGCCAGTAACAACAACACCCCAATCCA...AAGCATTAACAGTCTCCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS-3UTR CAA 90 bp AGTTACAGTGTTTGTTTTTACAGAGATATGTTGCCACCGATTATTGATTCTGGGGAAAATTTCCGAGCTTaGGTCTCGCAGATCATGACA +
Preference number: 5 (lower is better)
Translates to: SYSVCFYRDMLPPIIDSGENFRA*VSQIMT
Trigger: TGTCATGATCTGCGAGACCAAAGCTCGGAAATTTTC...CCCAGAATCAATAATCGGTGGCAACATATCTCTGTAAAAACAAACACTGTAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp CTCTGGCCCAACACTGACCACCCGCAGGGCTCTACGTaGCAGCCGGAGGCGCTGGCTGGAGGTGAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LWPNTDHPQGST*QPEALAGGEGH
Trigger: GTGCCCCTCACCTCCAGCCAGCGCCTCCGGCTGTCACGTAGAGCCCTGCGGGTGGTCAGTGTTGGGCCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp AGGGCAGGTCGCTGGCCCGTGCCACCATGGCTCCAGTaGCCACCGGCCGTTCCATGGTTTCTAGGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: RAGRWPVPPWLQ*PPAVPWFLGAE
Trigger: CTCCGCCCCTAGAAACCATGGAACGGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCAGCGACCTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp CCAGAACAACCCCGACAATCAGATAGGGCAGGTCGCTaGCCCGTGCCACCATGGCTCCAGTGCCCACCGGCC +
Preference number: 6 (lower is better)
Translates to: PEQPRQSDRAGR*PVPPWLQCPPA
Trigger: GGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCAGCGACCTGCCCTATCTGATTGTCGGGGTTGTTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp AACCCCGACAATCAGATAGGGCAGGTCGCTGGCCCGTaGCACCATGGCTCCAGTGCCCACCGGCCGTTCCAT +
Preference number: 6 (lower is better)
Translates to: NPDNQIGQVAGP*HHGSSAHRPFH
Trigger: ATGGAACGGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCAGCGACCTGCCCTATCTGATTGTCGGGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp GGGTCTCAGGGTTGTGTCTGGCCGGGCGGTCCTCAGTaGGACCACAGCGTGGGCACTGCCAACCGCATTCTC +
Preference number: 6 (lower is better)
Translates to: GSQGCVWPGGPQ*DHSVGTANRIL
Trigger: GAGAATGCGGTTGGCAGTGCCCACGCTGTGGTCCAACTGAGGACCGCCCGGCCAGACACAACCCTGAGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp GGGCTCTACGTGACAGCCGGAGGCGCTGGCTGGAGGTaGGGGGCACTGCATTCCTCAGCCATAGTACAGAGG +
Preference number: 6 (lower is better)
Translates to: GLYVTAGGAGWR*GALHSSAIVQR
Trigger: CCTCTGTACTATGGCTGAGGAATGCAGTGCCCCTCACCTCCAGCCAGCGCCTCCGGCTGTCACGTAGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GCATCTGGTCAGGTCTGCTGGGTCTGGAGGGTGGCATaGGGGGTGTGGCAGCAATCGGCTTGGTATCCCTCC +
Preference number: 6 (lower is better)
Translates to: ASGQVCWVWRVA*GVWQQSAWYPS
Trigger: GGAGGGATACCAAGCCGATTGCTGCCACACCCCCCATGCCACCCTCCAGACCCAGCAGACCTGACCAGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp CCACAGCGTGGGCACTGCCAACCGCATTCTCAGCCATaGACTGGTACACGCCTTCGTCCTCTGGCCCAACAC +
Preference number: 6 (lower is better)
Translates to: PQRGHCQPHSQP*TGTRLRPLAQH
Trigger: GTGTTGGGCCAGAGGACGAAGGCGTGTACCAGTGCATGGCTGAGAATGCGGTTGGCAGTGCCCACGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GTGAGCTTTGCACTCTGGCCCCATGGGATGACCAGCTaGGACAGCTCCACCGTGACCTCAGGGGGTTCGAAC +
Preference number: 6 (lower is better)
Translates to: VSFALWPHGMTS*DSSTVTSGGSN
Trigger: GTTCGAACCCCCTGAGGTCACGGTGGAGCTGTCCCAGCTGGTCATCCCATGGGGCCAGAGTGCAAAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GCGTGGGCACTGCCAACCGCATTCTCAGCCATGCACTaGTACACGCCTTCGTCCTCTGGCCCAACACTGACC +
Preference number: 6 (lower is better)
Translates to: AWALPTAFSAMH*YTPSSSGPTLT
Trigger: GGTCAGTGTTGGGCCAGAGGACGAAGGCGTGTACCAGTGCATGGCTGAGAATGCGGTTGGCAGTGCCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp CAATCAGATAGGGCAGGTCGCTGGCCCGTGCCACCATaGCTCCAGTGCCCACCGGCCGTTCCATGGTTTCTA +
Preference number: 6 (lower is better)
Translates to: QSDRAGRWPVPP*LQCPPAVPWFL
Trigger: TAGAAACCATGGAACGGCCGGTGGGCACTGGAGCCATGGTGGCACGGGCCAGCGACCTGCCCTATCTGATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp GGAAGTAGGCTGTACCGACGACGTTGGGGGCTTAACAAGCCCCGGTaGTTCCCGAAGCATCTGGTCAGGTCTGCTGGGTCTGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: GSRLYRRRWGLNKPR*FPKHLVRSAGSGGW
Trigger: CCACCCTCCAGACCCAGCAGACCTGACCAGATGCTTCGGGAACAACCGGGGCTTGTTAAGCCCCCAACGTCGTCGGTACAGCCTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp ACAGGCCCGTCCACTGACGCCACCAAGGTAGGGCTGCCCGTTGGCTaGGTGACCTGGAAGTCCCTCCAATGGCACCATTGTGTACTGGCA +
Preference number: 6 (lower is better)
Translates to: TGPSTDATKVGLPVG*VTWKSLQWHHCVLA
Trigger: TGCCAGTACACAATGGTGCCATTGGAGGGACTTCCAGGTCACCAAGCCAACGGGCAGCCCTACCTTGGTGGCGTCAGTGGACGGGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp GATGCTTCACTACGTAGTACAGGATGGGTGTCCGGCTaGTCCCCTCATGGCGAGGCCGCCACACCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: DASLRSTGWVSG*SPHGEAATPAH
Trigger: ATGAGCTGGTGTGGCGGCCTCGCCATGAGGGGAGCAGCCGGACACCCATCCTGTACTACGTAGTGAAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GGCATCCGTGCCACACACTGGTACCGTCCCACAGTGTaGTTGTTGAGGGCAGCAATGACAAGGGTCCCACGG +
Preference number: 6 (lower is better)
Translates to: GIRATHWYRPTV*LLRAAMTRVPR
Trigger: CCGTGGGACCCTTGTCATTGCTGCCCTCAACAACCACACTGTGGGACGGTACCAGTGTGTGGCACGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp TACCGGACCTGGGCTTTTGGGTGGCTCTCAGGCAGGTaGCAGGCAATGACGGCTGTGTTCCCCTCGTCTACT +
Preference number: 6 (lower is better)
Translates to: YRTWAFGWLSGR*QAMTAVFPSST
Trigger: AGTAGACGAGGGGAACACAGCCGTCATTGCCTGCCACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp CCACTCCTGTTTGACACTGTACCGGACCTGGGCTTTTaGGTGGCTCTCAGGCAGGTGGCAGGCAATGACGGC +
Preference number: 6 (lower is better)
Translates to: PLLFDTVPDLGF*VALRQVAGNDG
Trigger: GCCGTCATTGCCTGCCACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGTACAGTGTCAAACAGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp CTGGCCTTTGGTGACAATGACGGTCTGGGCTTCCAGTaGGTAGATGATGCGGGCAGCCTCAGCAGTGGACCG +
Preference number: 6 (lower is better)
Translates to: LAFGDNDGLGFQ*VDDAGSLSSGP
Trigger: CGGTCCACTGCTGAGGCTGCCCGCATCATCTACCCACTGGAAGCCCAGACCGTCATTGTCACCAAAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp TCGAACCTCACAGGTGAGCTTTGCACTCTGGCCCCATaGGATGACCAGCTGGGACAGCTCCACCGTGACCTC +
Preference number: 6 (lower is better)
Translates to: SNLTGELCTLAP*DDQLGQLHRDL
Trigger: GAGGTCACGGTGGAGCTGTCCCAGCTGGTCATCCCATGGGGCCAGAGTGCAAAGCTCACCTGTGAGGTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GGGTTTCCTCGAACCTCACAGGTGAGCTTTGCACTCTaGCCCCATGGGATGACCAGCTGGGACAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: GFPRTSQVSFAL*PHGMTSWDSST
Trigger: GGTGGAGCTGTCCCAGCTGGTCATCCCATGGGGCCAGAGTGCAAAGCTCACCTGTGAGGTTCGAGGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp CCAGGGTCAAGCCTGGTCAGGGTGAGGCGGTGCTGGTaGGCTGGAATGCCAGAAATGGTCCAGTCGTCAGAG +
Preference number: 6 (lower is better)
Translates to: PGSSLVRVRRCW*AGMPEMVQSSE
Trigger: CTCTGACGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp GCAGGCATCCGTGCCACACACTGGTACCGTCCCACAGTGTGGTTGTaGAGGGCAGCAATGACAAGGGTCCCACGGGTGATGAAGACACCC +
Preference number: 6 (lower is better)
Translates to: AGIRATHWYRPTVWL*RAAMTRVPRVMKTP
Trigger: GGGTGTCTTCATCACCCGTGGGACCCTTGTCATTGCTGCCCTCAACAACCACACTGTGGGACGGTACCAGTGTGTGGCACGGATGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp TGGAGGTCATATCCGTTGCTAACAATGGGCTGCCTCAGTTGGCTGTaGGTGTCTTCCCGCTGCTGGGCAAGCTCCCCTGGGCAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: WRSYPLLTMGCLSWL*VSSRCWASSPGQCC
Trigger: GCAGCACTGCCCAGGGGAGCTTGCCCAGCAGCGGGAAGACACCAACAGCCAACTGAGGCAGCCCATTGTTAGCAACGGATATGACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp GAGCTGAGGATGATAGGTGCCTCTGCAGGGGCTACCTaGTCTTCTCCCGGGCACTTCAGGGAAGTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: ELRMIGASAGAT*SSPGHFREVGC
Trigger: ACAGCCTACTTCCCTGAAGTGCCCGGGAGAAGAGCAGGTAGCCCCTGCAGAGGCACCTATCATCCTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp AAGCTTCCAGGGTCAAGCCTGGTCAGGGTGAGGCGGTaGTGGTTGGCTGGAATGCCAGAAATGGTCCAGTCG +
Preference number: 6 (lower is better)
Translates to: KLPGSSLVRVRR*WLAGMPEMVQS
Trigger: CGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGACCCTGGAAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp TCCTGTTTGACACTGTACCGGACCTGGGCTTTTGGGTaGCTCTCAGGCAGGTGGCAGGCAATGACGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SCLTLYRTWAFG*LSGRWQAMTAV
Trigger: CACAGCCGTCATTGCCTGCCACCTGCCTGAGAGCCACCCAAAAGCCCAGGTCCGGTACAGTGTCAAACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp CGTGCCACACACTGGTACCGTCCCACAGTGTGGTTGTaGAGGGCAGCAATGACAAGGGTCCCACGGGTGATG +
Preference number: 6 (lower is better)
Translates to: RATHWYRPTVWL*RAAMTRVPRVM
Trigger: CATCACCCGTGGGACCCTTGTCATTGCTGCCCTCAACAACCACACTGTGGGACGGTACCAGTGTGTGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp ATCCGTGCCACACACTGGTACCGTCCCACAGTGTGGTaGTTGAGGGCAGCAATGACAAGGGTCCCACGGGTG +
Preference number: 6 (lower is better)
Translates to: IRATHWYRPTVW*LRAAMTRVPRV
Trigger: CACCCGTGGGACCCTTGTCATTGCTGCCCTCAACAACCACACTGTGGGACGGTACCAGTGTGTGGCACGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp TCCACTGACGCCACCAAGGTAGGGCTGCCCGTTGGCTaGGTGACCTGGAAGTCCCTCCAATGGCACCATTGT +
Preference number: 6 (lower is better)
Translates to: STDATKVGLPVG*VTWKSLQWHHC
Trigger: ACAATGGTGCCATTGGAGGGACTTCCAGGTCACCAAGCCAACGGGCAGCCCTACCTTGGTGGCGTCAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp CCTGCAGGCATCCGTGCCACACACTGGTACCGTCCCACAGTGTGGTaGTTGAGGGCAGCAATGACAAGGGTCCCACGGGTGATGAAGACA +
Preference number: 6 (lower is better)
Translates to: PAGIRATHWYRPTVW*LRAAMTRVPRVMKT
Trigger: TGTCTTCATCACCCGTGGGACCCTTGTCATTGCTGCCCTCAACAACCACACTGTGGGACGGTACCAGTGTGTGGCACGGATGCCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp TACAAGCTTCCAGGGTCAAGCCTGGTCAGGGTGAGGCGGTGCTGGTaGGCTGGAATGCCAGAAATGGTCCAGTCGTCAGAGGAGTTCGTG +
Preference number: 6 (lower is better)
Translates to: YKLPGSSLVRVRRCW*AGMPEMVQSSEEFV
Trigger: CACGAACTCCTCTGACGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGACCCTGGAAGCTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp GCTGCCCGTTGGCTTGGTGACCTGGAAGTCCCTCCAATGGCACCATaGTGTACTGGCACGAAGAAGACAGGAGGGCACTCCGAGGAAAAC +
Preference number: 6 (lower is better)
Translates to: AARWLGDLEVPPMAP*CTGTKKTGGHSEEN
Trigger: GTTTTCCTCGGAGTGCCCTCCTGTCTTCTTCGTGCCAGTACACAATGGTGCCATTGGAGGGACTTCCAGGTCACCAAGCCAACGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GCTGGACCCATCCTTGGCCCATGTGACTCGAGGTGGTaGGATTCCACTGGCCACACACTCCAGTATGAGACT +
Preference number: 6 (lower is better)
Translates to: AGPILGPCDSRW*DSTGHTLQYET
Trigger: AGTCTCATACTGGAGTGTGTGGCCAGTGGAATCCCACCACCTCGAGTCACATGGGCCAAGGATGGGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GTCAAGCCTGGTCAGGGTGAGGCGGTGCTGGTTGGCTaGAATGCCAGAAATGGTCCAGTCGTCAGAGGAGTT +
Preference number: 6 (lower is better)
Translates to: VKPGQGEAVLVG*NARNGPVVRGV
Trigger: AACTCCTCTGACGACTGGACCATTTCTGGCATTCCAGCCAACCAGCACCGCCTCACCCTGACCAGGCTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp TGTAGCCTGACACCACGTAGGGCCGGGAGGGAGCACTaGGCTCACTCTCCCCTAACATGTTCAAAGCACGAA +
Preference number: 6 (lower is better)
Translates to: CSLTPRRAGREH*AHSPLTCSKHE
Trigger: TTCGTGCTTTGAACATGTTAGGGGAGAGTGAGCCCAGTGCTCCCTCCCGGCCCTACGTGGTGTCAGGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp TGGATCTGCTGCTCCTTACTGGCCACGATCTCAGGTTaGGGCCGCCGTCCTGTTCGGAAGGTGACCATAGCT +
Preference number: 6 (lower is better)
Translates to: WICCSLLATISG*GRRPVRKVTIA
Trigger: AGCTATGGTCACCTTCCGAACAGGACGGCGGCCCAAACCTGAGATCGTGGCCAGTAAGGAGCAGCAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp TATAGGCAGCAATGCTGGACCCATCCTTGGCCCATGTaGCTCGAGGTGGTGGGATTCCACTGGCCACACACT +
Preference number: 6 (lower is better)
Translates to: YRQQCWTHPWPM*LEVVGFHWPHT
Trigger: AGTGTGTGGCCAGTGGAATCCCACCACCTCGAGTCACATGGGCCAAGGATGGGTCCAGCATTGCTGCCTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp GGGTTCGAACACCTGGACATTGTAGAGGATGACTGCTaGCCCAGGATCCCCAACCCCATTGCTGGCCATACA +
Preference number: 6 (lower is better)
Translates to: GFEHLDIVEDDC*PRIPNPIAGHT
Trigger: TGTATGGCCAGCAATGGGGTTGGGGATCCTGGGGCAGCAGTCATCCTCTACAATGTCCAGGTGTTCGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp CATAGCTGTCTGGCCCTCGCCAGCACAGTTGTAGGCTaGCATCTCCACTTCGTACAAGCTTCCAGGGTCAAG +
Preference number: 6 (lower is better)
Translates to: HSCLALASTVVG*HLHFVQASRVK
Trigger: CTTGACCCTGGAAGCTTGTACGAAGTGGAGATGGCAGCCTACAACTGTGCTGGCGAGGGCCAGACAGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp CTTTCCGTTGAAGCGCCAAGTCACGTTCATCCATGGTaGCTCCACCACACAGCCCAGGATCACAGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LSVEAPSHVHPW*LHHTAQDHSSS
Trigger: GGAGGAACTGTGATCCTGGGCTGTGTGGTGGAGCCACCATGGATGAACGTGACTTGGCGCTTCAACGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp CTCCTTTCCGTTGAAGCGCCAAGTCACGTTCATCCATaGTGGCTCCACCACACAGCCCAGGATCACAGTTCC +
Preference number: 6 (lower is better)
Translates to: LLSVEAPSHVHP*WLHHTAQDHSS
Trigger: GGAACTGTGATCCTGGGCTGTGTGGTGGAGCCACCATGGATGAACGTGACTTGGCGCTTCAACGGAAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp AATGCTGGACCCATCCTTGGCCCATGTGACTCGAGGTaGTGGGATTCCACTGGCCACACACTCCAGTATGAG +
Preference number: 6 (lower is better)
Translates to: NAGPILGPCDSR*WDSTGHTLQYE
Trigger: CTCATACTGGAGTGTGTGGCCAGTGGAATCCCACCACCTCGAGTCACATGGGCCAAGGATGGGTCCAGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp AGAAAGCTCCTACTCCTGAGGCACACTGGGGACCTCTaGCAACCTGCTGGTTCTGGAGGTCATATCCGTTGC +
Preference number: 6 (lower is better)
Translates to: RKLLLLRHTGDL*QPAGSGGHIRC
Trigger: GCAACGGATATGACCTCCAGAACCAGCAGGTTGCCAGAGGTCCCCAGTGTGCCTCAGGAGTAGGAGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp TGGCTTGGTGACCTGGAAGTCCCTCCAATGGCACCATaGTGTACTGGCACGAAGAAGACAGGAGGGCACTCC +
Preference number: 6 (lower is better)
Translates to: WLGDLEVPPMAP*CTGTKKTGGHS
Trigger: GGAGTGCCCTCCTGTCTTCTTCGTGCCAGTACACAATGGTGCCATTGGAGGGACTTCCAGGTCACCAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp CGTTCGCCTCACTGCTGTTTGGCATGTGGTGACGGGTaGCTTCTGGAGGTGACAGCAGTCTTGAGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: RSPHCCLACGDG*LLEVTAVLRLE
Trigger: CTCCAACCTCAAGACTGCTGTCACCTCCAGAAGCAACCCGTCACCACATGCCAAACAGCAGTGAGGCGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp CTCCCAGCTTCTGGACAGTGGACATGGGCTGGACTGTaGCCTGAGGAACCTCATTCAAATCAGCAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LPASGQWTWAGL*PEEPHSNQQGS
Trigger: GCTGCCTTGCTGATTTGAATGAGGTTCCTCAGGTCACAGTCCAGCCCATGTCCACTGTCCAGAAGCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp TGGTTCTGGAGGTCATATCCGTTGCTAACAATGGGCTaGCTCAGTTGGCTGTTGGTGTCTTCCCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: WFWRSYPLLTMG*LSWLLVSSRCW
Trigger: CCAGCAGCGGGAAGACACCAACAGCCAACTGAGGCAGCCCATTGTTAGCAACGGATATGACCTCCAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp CCTACTCCTGAGGCACACTGGGGACCTCTGGCAACCTaGTGGTTCTGGAGGTCATATCCGTTGCTAACAATG +
Preference number: 6 (lower is better)
Translates to: PTPEAHWGPLAT*WFWRSYPLLTM
Trigger: CATTGTTAGCAACGGATATGACCTCCAGAACCAGCAGGTTGCCAGAGGTCCCCAGTGTGCCTCAGGAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp GGGATTCCACTGGCCACACACTCCAGTATGAGACTCTaGCCTTTGGTGACAATGACGGTCTGGGCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: GIPLATHSSMRL*PLVTMTVWASS
Trigger: ACTGGAAGCCCAGACCGTCATTGTCACCAAAGGCCAGAGTCTCATACTGGAGTGTGTGGCCAGTGGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp AGCGTGTATAAGAAAGCTCCTACTCCTGAGGCACACTaGGGACCTCTGGCAACCTGCTGGTTCTGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: SVYKKAPTPEAH*GPLATCWFWRS
Trigger: TGACCTCCAGAACCAGCAGGTTGCCAGAGGTCCCCAGTGTGCCTCAGGAGTAGGAGCTTTCTTATACACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp GGTCACCGGGTTGTAGGCGGCACACTTGTACATGCCTTCGTCCTCTaGGCTGGCATTGACAATTTGGAGATTCCCGGATGGCATGATCAG +
Preference number: 6 (lower is better)
Translates to: GHRVVGGTLVHAFVL*AGIDNLEIPGWHDQ
Trigger: CTGATCATGCCATCCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGGACGAAGGCATGTACAAGTGTGCCGCCTACAACCCGGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp AGCTTCTGGACAGTGGACATGGGCTGGACTGTGACCTaGGGAACCTCATTCAAATCAGCAAGGCAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SFWTVDMGWTVT*GTSFKSARQPA
Trigger: AGCAGGCTGCCTTGCTGATTTGAATGAGGTTCCTCAGGTCACAGTCCAGCCCATGTCCACTGTCCAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp CCCAACCCCATTGCTGGCCATACATCGGTAGGTGCCTaGGTCCTCCTCGCTGGTGGTGTCAATAAGCAAATT +
Preference number: 6 (lower is better)
Translates to: PNPIAGHTSVGA*VLLAGGVNKQI
Trigger: AATTTGCTTATTGACACCACCAGCGAGGAGGACTCAGGCACCTACCGATGTATGGCCAGCAATGGGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp CCCAGAGCATCATCAGAGCCATTTAGCTCCTTTCCGTaGAAGCGCCAAGTCACGTTCATCCATGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: PRASSEPFSSFP*KRQVTFIHGGS
Trigger: GGAGCCACCATGGATGAACGTGACTTGGCGCTTCAACGGAAAGGAGCTAAATGGCTCTGATGATGCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp CCAGAGCATCATCAGAGCCATTTAGCTCCTTTCCGTTaGAGCGCCAAGTCACGTTCATCCATGGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: PEHHQSHLAPFR*SAKSRSSMVAP
Trigger: TGGAGCCACCATGGATGAACGTGACTTGGCGCTTCAACGGAAAGGAGCTAAATGGCTCTGATGATGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp AATTGTGGGAGGTGGTGTTTCAAAGGACACATGAACTaGTGGGCTAGGCGAGAACCGCATCCCACGTTCCTG +
Preference number: 6 (lower is better)
Translates to: NCGRWCFKGHMN*WARREPHPTFL
Trigger: CAGGAACGTGGGATGCGGTTCTCGCCTAGCCCATCAGTTCATGTGTCCTTTGAAACACCACCTCCCACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp GTTGTAGGCGGCACACTTGTACATGCCTTCGTCCTCTaGGCTGGCATTGACAATTTGGAGATTCCCGGATGG +
Preference number: 6 (lower is better)
Translates to: VVGGTLVHAFVL*AGIDNLEIPGW
Trigger: CCATCCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGGACGAAGGCATGTACAAGTGTGCCGCCTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp ATGAAGACACCCAGAGCATCATCAGAGCCATTTAGCTCCTTTCCGTaGAAGCGCCAAGTCACGTTCATCCATGGTGGCTCCACCACACAG +
Preference number: 6 (lower is better)
Translates to: MKTPRASSEPFSSFP*KRQVTFIHGGSTTQ
Trigger: CTGTGTGGTGGAGCCACCATGGATGAACGTGACTTGGCGCTTCAACGGAAAGGAGCTAAATGGCTCTGATGATGCTCTGGGTGTCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 90 bp GGCACACTTGTACATGCCTTCGTCCTCTTGGCTGGCATTGACAATTaGGAGATTCCCGGATGGCATGATCAGGTAGTTGTCTCTAGAGGC +
Preference number: 6 (lower is better)
Translates to: GTLVHAFVLLAGIDN*EIPGWHDQVVVSRG
Trigger: GCCTCTAGAGACAACTACCTGATCATGCCATCCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGGACGAAGGCATGTACAAGTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CCA 72 bp CTCTTGGCTGGCATTGACAATTTGGAGATTCCCGGATaGCATGATCAGGTAGTTGTCTCTAGAGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LLAGIDNLEIPG*HDQVVVSRGLQ
Trigger: CTGGAGGCCTCTAGAGACAACTACCTGATCATGCCATCCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp GCACACTTGTACATGCCTTCGTCCTCTTGGCTGGCATaGACAATTTGGAGATTCCCGGATGGCATGATCAGG +
Preference number: 6 (lower is better)
Translates to: AHLYMPSSSWLA*TIWRFPDGMIR
Trigger: CCTGATCATGCCATCCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGGACGAAGGCATGTACAAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp GAATGCCAGAAATGGTCCAGTCGTCAGAGGAGTTCGTaGCCTTACGATGCTTCACTACGTAGTACAGGATGG +
Preference number: 6 (lower is better)
Translates to: ECQKWSSRQRSS*PYDASLRSTGW
Trigger: CCATCCTGTACTACGTAGTGAAGCATCGTAAGGTCACGAACTCCTCTGACGACTGGACCATTTCTGGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS TCA 72 bp ACTGGTACAAGACCTAAACAGCACTGGGGCCCTGAATaGTATGGAGGGTCCCATGAAGATTCTAGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: TGTRPKQHWGPE*YGGSHEDSSPG
Trigger: TCCTGGACTAGAATCTTCATGGGACCCTCCATATCATTCAGGGCCCCAGTGCTGTTTAGGTCTTGTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS CAA 72 bp GTACATGCCTTCGTCCTCTTGGCTGGCATTGACAATTaGGAGATTCCCGGATGGCATGATCAGGTAGTTGTC +
Preference number: 6 (lower is better)
Translates to: VHAFVLLAGIDN*EIPGWHDQVVV
Trigger: GACAACTACCTGATCATGCCATCCGGGAATCTCCAAATTGTCAATGCCAGCCAAGAGGACGAAGGCATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3
CDS GCA 72 bp ATACATCCACTTGAGCATAATAGTGGTCTCATTGACTaGATCAGTGAAGGTGATGTAAGGTCCTGCCACGGG +
Preference number: 6 (lower is better)
Translates to: IHPLEHNSGLID*ISEGDVRSCHG
Trigger: CCCGTGGCAGGACCTTACATCACCTTCACTGATGCAGTCAATGAGACCACTATTATGCTCAAGTGGATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114634.3