RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BNIP5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048905

Ensembl transcript IDs: ENSMUST00000062357.6, ENSMUST00000228025.2

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCAGGACAGGAACTCACACAGGGCAGGAACCTGGAGGCAGGAGCTaGAGCAGACACCACAGAGCGGGGCTACTTACTGGCTTGCTCCCC +
Preference number: 1 (lower is better)
Translates to: VRTGTHTGQEPGGRS*SRHHRAGLLTGLLP
Trigger: GGGGAGCAAGCCAGTAAGTAGCCCCGCTCTGTGGTGTCTGCTTCAGCTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGTTCCTGTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR GCA 90 bp CTCCAGGTTCACTCGATGAAGCCTGACCTCCTAACCCCATTCCAGTaGCGACCCCAGCACAGCTTCTGGGTCCCACTTCCCGGAAGAAAG +
Preference number: 1 (lower is better)
Translates to: LQVHSMKPDLLTPFQ*RPQHSFWVPLPGRK
Trigger: CTTTCTTCCGGGAAGTGGGACCCAGAAGCTGTGCTGGGGTCGGCACTGGAATGGGGTTAGGAGGTCAGGCTTCATCGAGTGAACCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 90 bp TTAGTTCCCGGGGCTGGAGAGATGGCTCAGTGGATAAGAGGGCATTaGCTGCTCTTCCAGAGGCCCCAGGTTCAATTCCCAGCATCCACA +
Preference number: 1 (lower is better)
Translates to: LVPGAGEMAQWIRGH*LLFQRPQVQFPAST
Trigger: TGTGGATGCTGGGAATTGAACCTGGGGCCTCTGGAAGAGCAGTCAATGCCCTCTTATCCACTGAGCCATCTCTCCAGCCCCGGGAACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 90 bp TGGGCCATCCTATGGGGGTCTTCCGGGTCTCCGGGCCAAAGCTGCTaGCTATTGGCTACTCAGAAAGAACTTGTGTATGAGATGTGGCCT +
Preference number: 1 (lower is better)
Translates to: WAILWGSSGSPGQSC*LLATQKELVYEMWP
Trigger: AGGCCACATCTCATACACAAGTTCTTTCTGAGTAGCCAATAGTCAGCAGCTTTGGCCCGGAGACCCGGAAGACCCCCATAGGATGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 90 bp CTTTGGGGCAGTGCACATCTGTGCAGCATCTGGGGCAGTCCAGCTTaGAGCCCTCTTCGACTTTCTGAAATCTACCCAGCTGTGACCATG +
Preference number: 1 (lower is better)
Translates to: LWGSAHLCSIWGSPA*SPLRLSEIYPAVTM
Trigger: CATGGTCACAGCTGGGTAGATTTCAGAAAGTCGAAGAGGGCTTCAAGCTGGACTGCCCCAGATGCTGCACAGATGTGCACTGCCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 90 bp CCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATaGACGTGTGACGAATATGCGTATCTATGTCACTGGCCACATCTC +
Preference number: 1 (lower is better)
Translates to: PIAQGVNGPSSCVWV*TCDEYAYLCHWPHL
Trigger: GAGATGTGGCCAGTGACATAGATACGCATATTCGTCACACGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 90 bp CCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGTGTaGCGAATATGCGTATCTATGTCACTGGCCACATCTCACAATTGT +
Preference number: 1 (lower is better)
Translates to: PGSQWPQLLCVGMDV*RICVSMSLATSHNC
Trigger: ACAATTGTGAGATGTGGCCAGTGACATAGATACGCATATTCGTCACACGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 90 bp ACTTGGATGCCAGCATCGGGAACTCATAACAAATATTCTACAGCCTaGATAGTCGTTCTTACAGATAAGAGACAATGTCCAAGGTTTGGA +
Preference number: 1 (lower is better)
Translates to: TWMPASGTHNKYSTA*IVVLTDKRQCPRFG
Trigger: TCCAAACCTTGGACATTGTCTCTTATCTGTAAGAACGACTATCCAGGCTGTAGAATATTTGTTATGAGTTCCCGATGCTGGCATCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 90 bp ATCAGTGATAATGGTGTCTTAGTCAGGGTTTCTAACCCAACACTGTaGCCAAAATGTAAATTGAGAGGAAAGGGTTTAACCTGCTTACAC +
Preference number: 1 (lower is better)
Translates to: ISDNGVLVRVSNPTL*PKCKLRGKGLTCLH
Trigger: GTGTAAGCAGGTTAAACCCTTTCCTCTCAATTTACATTTTGGTCACAGTGTTGGGTTAGAAACCCTGACTAAGACACCATTATCACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 90 bp TCAGTGTCTTTATTGGTTCAAACAACACAGTATAAAAACCAGACTTaGATGCCAGCATCGGGAACTCATAACAAATATTCTACAGCCTGG +
Preference number: 1 (lower is better)
Translates to: SVSLLVQTTQYKNQT*MPASGTHNKYSTAW
Trigger: CCAGGCTGTAGAATATTTGTTATGAGTTCCCGATGCTGGCATCCAAGTCTGGTTTTTATACTGTGTTGTTTGAACCAATAAAGACACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp CCCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGCGGGATACCGGGGATTaGCCTCTGACCTACACTACC +
Preference number: 2 (lower is better)
Translates to: PRGLLSLPSCRTQDHQPKRDTGD*PLTYTT
Trigger: GGTAGTGTAGGTCAGAGGTCAATCCCCGGTATCCCG...CTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR GCA 90 bp CCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGGGGCAGTGCACATCTGTaGAGCATCTGGGGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: PVACSAYLLVEPRTTSPRGSAHL*SIWGSP
Trigger: TGGACTGCCCCAGATGCTGCACAGATGTGCACTGCC...CCTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp CTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGCCAGCACAGACAGGATaGAGGCTGCATGTCTTAGGG +
Preference number: 2 (lower is better)
Translates to: LPIAQGVNGPSSCVWVWTPAQTG*RLHVLG
Trigger: CCCTAAGACATGCAGCCTTCATCCTGTCTGTGCTGG...CGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCCCCCAGCACAGCTTCTaGGTCCCACTTCCCGGAAGA +
Preference number: 2 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGPQHSF*VPLPGR
Trigger: TCTTCCGGGAAGTGGGACCCAGAAGCTGTGCTGGGG...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CCA 90 bp TCAGGACAGGAACTCACACAGGGCAGGAACCTGGAGGCAGGAGCTGAAGCAGACAGACTAGGGTGGGGTTaGGGTAGAGAGATGCTCACC +
Preference number: 2 (lower is better)
Translates to: SGQELTQGRNLEAGAEADRLGWG*GREMLT
Trigger: GGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCT...GTCTGCTTCAGCTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGTTCCTGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp ACTCACTCTGCCACCCAGGCTTTGATACCCTCCCCCATGGTCACACTTTCCTGCGGCAGATGTCAGTCATaGGGGATGAGGGAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: THSATQALIPSPMVTLSCGRCQS*GMRELR
Trigger: CCTCAACTCCCTCATCCCTCATGACTGACATCTGCC...GCAGGAAAGTGTGACCATGGGGGAGGGTATCAAAGCCTGGGTGGCAGAGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 90 bp TTTAGTTCCCGGGGCTGGAGAGATGGCTCAGTGGATAAGAGGGCATaGACTGCTCTTCCAGAGGCCCCAGGTTCAATTCCCAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: FSSRGWRDGSVDKRA*TALPEAPGSIPSIH
Trigger: GTGGATGCTGGGAATTGAACCTGGGGCCTCTGGAAGAGCAGTCAATGCCCTCTTATCCACTGAGCCATCTCTCCAGCCCCGGGAACTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCAAGGATGCCTTCGCTTaGGACTGCCTCCACCTGAGA +
Preference number: 2 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGKDAFA*DCLHLR
Trigger: TCTCAGGTGGAGGCAGTCTCAAGCGAAGGCATCCTT...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR GCA 90 bp CCCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGTCCATGGTCCATTCTTaGCTGCAGGGAATCACAAAA +
Preference number: 2 (lower is better)
Translates to: PRGLLSLPSCRTQDHQPKSMVHS*LQGITK
Trigger: TTTTGTGATTCCCTGCAGGCAAGAATGGACCATGGA...CTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR GCA 90 bp ATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAACAGAGGCTCCTTTCTCCTAACCCCATTCCAGTaGCGACCCCAGCACAGCTTC +
Preference number: 2 (lower is better)
Translates to: MPYSWISWRHFLNRGSFLLTPFQ*RPQHSF
Trigger: GAAGCTGTGCTGGGGTCGGCACTGGAATGGGGTTAG...GAGAAAGGAGCCTCTGTTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CCA 90 bp TTTCCTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGACAGAGAATTGTCCATaGTCCATTCTTGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: FPANSPGSQWPQLLCVGMTENCP*SILACR
Trigger: CCTGCAGGCAAGAATGGACCATGGACAATTCTCTGT...CATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCACCAGGCAGATCCCTTaGACTCTCAACCTCAGACAA +
Preference number: 2 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGTRQIP*TLNLRQ
Trigger: TTGTCTGAGGTTGAGAGTCCAAGGGATCTGCCTGGT...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp CTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGACAGCTACAGCTATTTaGATGCATGTGTGTTTTCCA +
Preference number: 2 (lower is better)
Translates to: LPIAQGVNGPSSCVWVWTTATAI*MHVCFP
Trigger: TGGAAAACACACATGCATTCAAATAGCTGTAGCTGT...CGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCAAATCTACCCAGCTGTaGCCATGTAAAGTAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGKSTQL*PCKVAQ
Trigger: CTGGGCTACTTTACATGGTCACAGCTGGGTAGATTT...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CCA 90 bp GCTCCTGACCCTTGTTTCAAAAATTTAGTTCCCGGGGCTGGAGAGATGGCTCAGCTCAAGAGACTAGGGTaGGGTTGGGGTAGAGAGATG +
Preference number: 2 (lower is better)
Translates to: APDPCFKNLVPGAGEMAQLKRLG*GWGREM
Trigger: CATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAG...CTGAGCCATCTCTCCAGCCCCGGGAACTAAATTTTTGAAACAAGGGTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CCA 90 bp CCAGGTGCCATGAGCCTGCTGTGGCCACCAATAGTCTCCAAGGCTTACGAGACTTACAGCTGGATCTCATaGAGGCATTTCCTCAACAGA +
Preference number: 2 (lower is better)
Translates to: PGAMSLLWPPIVSKAYETYSWIS*RHFLNR
Trigger: TCTGTTGAGGAAATGCCTCCATGAGATCCAGCTGTA...AGTCTCGTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp GCTCCTGACCCTTGTTTCAAAAATTTAGTTCCCGGGGCTGGAGAGATGGCTCAGCCCTCTTCGACTTTCTaGAATCTACCCAGCTGTGAC +
Preference number: 2 (lower is better)
Translates to: APDPCFKNLVPGAGEMAQPSSTF*NLPSCD
Trigger: GTCACAGCTGGGTAGATTTCAGAAAGTCGAAGAGGG...CTGAGCCATCTCTCCAGCCCCGGGAACTAAATTTTTGAAACAAGGGTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR TCA 90 bp CCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACACACAACCATCCAGCAGTTCCCAGACAATGCTaGGCGCACAGAGAATTGTCC +
Preference number: 2 (lower is better)
Translates to: PFSVITPACVKLTHNHPAVPRQC*AHRELS
Trigger: GGACAATTCTCTGTGCGCTCAGCATTGTCTGGGAAC...TGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 90 bp AGGCATTTCCTCAACAGAGGCTCCTTTCTCTGTGATAACTCCAGCTaGTGTCAAGTTGACACACAACCATCCAGCACAGACAGGATGAAG +
Preference number: 2 (lower is better)
Translates to: RHFLNRGSFLCDNSS*CQVDTQPSSTDRMK
Trigger: CTTCATCCTGTCTGTGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGGAGCCTCTGTTGAGGAAATGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 90 bp CCCGGGAGATCGGGAGTGACGTGGCAGAGACACAGCTACAGCTATTaGAATGCATGTGTGTTTTCCAGCTGGAAACTGAATTTAAAAACT +
Preference number: 2 (lower is better)
Translates to: PGRSGVTWQRHSYSY*NACVFSSWKLNLKT
Trigger: AGTTTTTAAATTCAGTTTCCAGCTGGAAAACACACATGCATTCAAATAGCTGTAGCTGTGTCTCTGCCACGTCACTCCCGATCTCCCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CCA 90 bp GACAATGTCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAAAGCTGCTGACTATTaGCTACTCAGAAAGAACTTG +
Preference number: 2 (lower is better)
Translates to: DNVQGLERALSGKTSPVPKAADY*LLRKNL
Trigger: CAAGTTCTTTCTGAGTAGCCAATAGTCAGCAGCTTT...GGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGACATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR GCA 72 bp CACTCGATGAAGCCTGACCTCCTAACCCCATTCCAGTaGCGACCCCAGCACAGCTTCTGGGTCCCACTTCCC +
Preference number: 3 (lower is better)
Translates to: HSMKPDLLTPFQ*RPQHSFWVPLP
Trigger: GGGAAGTGGGACCCAGAAGCTGTGCTGGGGTCGGCACTGGAATGGGGTTAGGAGGTCAGGCTTCATCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp CAAGGCAGATCGAACTGGAGGCGGGATACCGGGGATTaGCCTCTGACCTACACTACCTCCCTCCACCCAGTG +
Preference number: 3 (lower is better)
Translates to: QGRSNWRRDTGD*PLTYTTSLHPV
Trigger: CACTGGGTGGAGGGAGGTAGTGTAGGTCAGAGGTCAATCCCCGGTATCCCGCCTCCAGTTCGATCTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CAA 90 bp TCAGGACAGGAACTCACACAGGGCAGGAACCTGGAGGCAGGAGCTGAAGCAGACGCGGGATACCGGGGATaGACCTCTGACCTACACTAC +
Preference number: 3 (lower is better)
Translates to: SGQELTQGRNLEAGAEADAGYRG*TSDLHY
Trigger: GTAGTGTAGGTCAGAGGTCAATCCCCGGTATCCCGC...GTCTGCTTCAGCTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGTTCCTGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR GCA 72 bp AGGCTGCATGTCTTAGGGCAAGAGGCTTTGGGGCAGTaGACATCTGTGCAGCATCTGGGGCAGTCCAGCTTG +
Preference number: 3 (lower is better)
Translates to: RLHVLGQEALGQ*TSVQHLGQSSL
Trigger: CAAGCTGGACTGCCCCAGATGCTGCACAGATGTGCACTGCCCCAAAGCCTCTTGCCCTAAGACATGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CAA 90 bp CCCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGGTCCATGGTCCATTCTaGCCTGCAGGGAATCACAAA +
Preference number: 3 (lower is better)
Translates to: PRGLLSLPSCRTQDHQPKVHGPF*PAGNHK
Trigger: TTTGTGATTCCCTGCAGGCAAGAATGGACCATGGAC...CTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp GGGGCTGGAGAGATGGCTCAGTGGATAAGAGGGCATTaGCTGCTCTTCCAGAGGCCCCAGGTTCAATTCCCA +
Preference number: 3 (lower is better)
Translates to: GAGEMAQWIRGH*LLFQRPQVQFP
Trigger: TGGGAATTGAACCTGGGGCCTCTGGAAGAGCAGTCAATGCCCTCTTATCCACTGAGCCATCTCTCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CAA 90 bp TTCAGCCCAGGTGCCATGAGCCTGCTGTGGCCACCAATAGTCTCCAAGGCTTACAACCAGGCAGATCCCTaGGACTCTCAACCTCAGACA +
Preference number: 3 (lower is better)
Translates to: FSPGAMSLLWPPIVSKAYNQADP*DSQPQT
Trigger: TGTCTGAGGTTGAGAGTCCAAGGGATCTGCCTGGTT...GTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGGGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 72 bp CACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTaGGGTTGGGGTAGAGAGATGCTCACCTGGGCCACA +
Preference number: 3 (lower is better)
Translates to: HTAVVSVLKRLG*GWGREMLTWAT
Trigger: TGTGGCCCAGGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 72 bp ATGAAGCCATTCAGCCCAGGTGCCATGAGCCTGCTGTaGCCACCAATAGTCTCCAAGGCTTACGAGACTCAC +
Preference number: 3 (lower is better)
Translates to: MKPFSPGAMSLL*PPIVSKAYETH
Trigger: GTGAGTCTCGTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGGGCTGAATGGCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CAA 90 bp GACAATGTCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCCTTGCTCCCCGTGGCTaGCTCAGCCTACCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: DNVQGLERALSGKTSPVPLAPRG*LSLPSC
Trigger: ACAAGAAGGTAGGCTGAGCAAGCCACGGGGAGCAAG...GGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGACATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR GCA 72 bp GAGCGCACAGAGAATTGTCCATGGTCCATTCTTGCCTaGAGGGAATCACAAAAGTGGGCCATCCTATGGGGG +
Preference number: 3 (lower is better)
Translates to: ERTENCPWSILA*RESQKWAILWG
Trigger: CCCCCATAGGATGGCCCACTTTTGTGATTCCCTGCAGGCAAGAATGGACCATGGACAATTCTCTGTGCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 72 bp CAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATaGACGTGTGACGAATATGCGTATCTATGTCACTGG +
Preference number: 3 (lower is better)
Translates to: QGVNGPSSCVWV*TCDEYAYLCHW
Trigger: CCAGTGACATAGATACGCATATTCGTCACACGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CAA 90 bp GTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGAGAGATGCTCACCTGTGGTGGCCTAAGTTaGGGTGATGTCAGCGCTGAA +
Preference number: 3 (lower is better)
Translates to: VVSVLKRLGWGWGREMLTCGGLS*GDVSAE
Trigger: TTCAGCGCTGACATCACCCAAACTTAGGCCACCACA...GGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CAA 90 bp GCTCCTGACCCTTGTTTCAAAAATTTAGTTCCCGGGGCTGGAGAGATGGCTCAGTTAGGGCAAGAGGCTTaGGGGCAGTGCACATCTGTG +
Preference number: 3 (lower is better)
Translates to: APDPCFKNLVPGAGEMAQLGQEA*GQCTSV
Trigger: CACAGATGTGCACTGCCCCAAAGCCTCTTGCCCTAA...CTGAGCCATCTCTCCAGCCCCGGGAACTAAATTTTTGAAACAAGGGTCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp CTATGGGGGTCTTCCGGGTCTCCGGGCCAAAGCTGCTaGCTATTGGCTACTCAGAAAGAACTTGTGTATGAG +
Preference number: 3 (lower is better)
Translates to: LWGSSGSPGQSC*LLATQKELVYE
Trigger: CTCATACACAAGTTCTTTCTGAGTAGCCAATAGTCAGCAGCTTTGGCCCGGAGACCCGGAAGACCCCCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp AGTGCACATCTGTGCAGCATCTGGGGCAGTCCAGCTTaGAGCCCTCTTCGACTTTCTGAAATCTACCCAGCT +
Preference number: 3 (lower is better)
Translates to: SAHLCSIWGSPA*SPLRLSEIYPA
Trigger: AGCTGGGTAGATTTCAGAAAGTCGAAGAGGGCTTCAAGCTGGACTGCCCCAGATGCTGCACAGATGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp GTCAAGTTGACACACAACCATCCAGCACAGACAGGATaGAGGCTGCATGTCTTAGGGCAAGAGGCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: VKLTHNHPAQTG*RLHVLGQEALG
Trigger: CCCCAAAGCCTCTTGCCCTAAGACATGCAGCCTTCATCCTGTCTGTGCTGGATGGTTGTGTGTCAACTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp CAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGTGTaGCGAATATGCGTATCTATGTCACTGGCCACATCT +
Preference number: 3 (lower is better)
Translates to: QWPQLLCVGMDV*RICVSMSLATS
Trigger: AGATGTGGCCAGTGACATAGATACGCATATTCGTCACACGTCCATACCCACACACAGGAGCTGGGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 72 bp GGTCTTCCGGGTCTCCGGGCCAAAGCTGCTGACTATTaGCTACTCAGAAAGAACTTGTGTATGAGATGTGGC +
Preference number: 3 (lower is better)
Translates to: GLPGLRAKAADY*LLRKNLCMRCG
Trigger: GCCACATCTCATACACAAGTTCTTTCTGAGTAGCCAATAGTCAGCAGCTTTGGCCCGGAGACCCGGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp TCCCACTTCCCGGAAGAAAGTGTTCCCAGACAATGCTaGGCGCACAGAGAATTGTCCATGGTCCATTCTTGC +
Preference number: 3 (lower is better)
Translates to: SHFPEESVPRQC*AHRELSMVHSC
Trigger: GCAAGAATGGACCATGGACAATTCTCTGTGCGCTCAGCATTGTCTGGGAACACTTTCTTCCGGGAAGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp GAAGCCCTCTTCGACTTTCTGAAATCTACCCAGCTGTaGCCATGTAAAGTAGCCCAGGTGTGGTGGCACACA +
Preference number: 3 (lower is better)
Translates to: EALFDFLKSTQL*PCKVAQVWWHT
Trigger: TGTGTGCCACCACACCTGGGCTACTTTACATGGTCACAGCTGGGTAGATTTCAGAAAGTCGAAGAGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 72 bp GCACATGCCTTTAATCCCGGGAGATCGGGAGTGACGTaGCAGAGACACAGCTACAGCTATTTGAATGCATGT +
Preference number: 3 (lower is better)
Translates to: AHAFNPGRSGVT*QRHSYSYLNAC
Trigger: ACATGCATTCAAATAGCTGTAGCTGTGTCTCTGCCACGTCACTCCCGATCTCCCGGGATTAAAGGCATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 72 bp TTCCCAGACAATGCTGAGCGCACAGAGAATTGTCCATaGTCCATTCTTGCCTGCAGGGAATCACAAAAGTGG +
Preference number: 3 (lower is better)
Translates to: FPDNAERTENCP*SILACRESQKW
Trigger: CCACTTTTGTGATTCCCTGCAGGCAAGAATGGACCATGGACAATTCTCTGTGCGCTCAGCATTGTCTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR-3UTR CAA 90 bp GACAATGTCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCCTAAGACTCATGGATTaGGCAGATGTCAGTCATGAG +
Preference number: 3 (lower is better)
Translates to: DNVQGLERALSGKTSPVPLRLMD*ADVSHE
Trigger: CTCATGACTGACATCTGCCAAATCCATGAGTCTTAG...GGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGACATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR TCA 72 bp GGTTGGGGTAGAGAGATGCTCACCTGGGCCACAGAGTaGGACCTTTCTCAATACGATAAAATAATTAACTGG +
Preference number: 3 (lower is better)
Translates to: GWGREMLTWATE*DLSQYDKIINW
Trigger: CCAGTTAATTATTTTATCGTATTGAGAAAGGTCTCACTCTGTGGCCCAGGTGAGCATCTCTCTACCCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CCA 72 bp ACACAACACCATCTTTTGAAAAGTCACTCAAAGCTTTaGCTCTTGCACGTCCATGCCACACCCAAGAATACT +
Preference number: 3 (lower is better)
Translates to: TQHHLLKSHSKL*LLHVHATPKNT
Trigger: AGTATTCTTGGGTGTGGCATGGACGTGCAAGAGCCAAAGCTTTGAGTGACTTTTCAAAAGATGGTGTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp TCAGGACAGGAACTCACACAGGGCAGGAACCTGGAGGCAGGAGCTGAAGCAGACCGCTGGCTGTCCTCCTaGAGGTGGCGCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGQELTQGRNLEAGAEADRWLSS*RWRWRG
Trigger: GCCCCTCCAGCGCCACCTGCAGGAGGACAGCCAGCG...GTCTGCTTCAGCTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGTTCCTGTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGCGCTGGAGGGGCACCTaGTGTTCGAGGACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LPIAQGVNGPSSCVWVWTRWRGT*CSRTRG
Trigger: ACCCCGAGTCCTCGAACACCAGGTGCCCCTCCAGCG...CGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp TCAGGACAGGAACTCACACAGGGCAGGAACCTGGAGGCAGGAGCTGAAGCAGACTCCTGGGGACCCAGCTaGTGCCCCTCCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SGQELTQGRNLEAGAEADSWGPS*CPSCSL
Trigger: GAGGCTGCAGGAGGGGCACCAGCTGGGTCCCCAGGA...GTCTGCTTCAGCTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGTTCCTGTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CCTCTGACCTACACTACCTCCCTCCACCCAGTGACACACAGAGACAGACAGGCGCTCAGCCAGCTCTGCTaGGCCTCCCTCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLTYTTSLHPVTHRDRQALSQLC*ASLGSL
Trigger: GAGGCTTCCGAGGGAGGCCCAGCAGAGCTGGCTGAG...CGCCTGTCTGTCTCTGTGTGTCACTGGGTGGAGGGAGGTAGTGTAGGTCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGGGCTCTGTCCAGCAGTaGCTTCTCCTCGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPIAQGVNGPSSCVWVWTGSVQQ*LLLGSL
Trigger: CAGGGACCCGAGGAGAAGCCACTGCTGGACAGAGCC...CGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp AGCCTCCAGGTTCACTCGATGAAGCCTGACCTCCTAACCCCATTCCAGTGCCGATCCTGCAGGTGGCGCTaGAGGGGCACCTGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SLQVHSMKPDLLTPFQCRSCRWR*RGTWCS
Trigger: CGAACACCAGGTGCCCCTCCAGCGCCACCTGCAGGA...TCGGCACTGGAATGGGGTTAGGAGGTCAGGCTTCATCGAGTGAACCTGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGTTCTGGCTCCATCGCTaGCTGTCCTCCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPIAQGVNGPSSCVWVWTFWLHR*LSSCRW
Trigger: CCACCTGCAGGAGGACAGCCAGCGATGGAGCCAGAA...CGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CCAGGTGCCATGAGCCTGCTGTGGCCACCAATAGTCTCCAAGGCTTACGAGACTCCCAGGGCTATCTCATaGGGGGCGCTTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGAMSLLWPPIVSKAYETPRAIS*GALEAA
Trigger: GGCTGCCTCAAGCGCCCCCCATGAGATAGCCCTGGG...AGTCTCGTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp TTCAGCCCAGGTGCCATGAGCCTGCTGTGGCCACCAATAGTCTCCAAGGCTTACGCTCCGGCCTTCCTCTaGGAGGCTGGCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FSPGAMSLLWPPIVSKAYAPAFL*EAGLLS
Trigger: AGACAGAAGGCCAGCCTCTCAGAGGAAGGCCGGAGC...GTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGGGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp CCCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGGGGTACTTCCGGATCTaGCTCCCTAGATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRGLLSLPSCRTQDHQPKGYFRI*LPRSLS
Trigger: GGACAGGGATCTAGGGAGGCAGATCCGGAAGTACCC...CTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CCCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGGGCTCTCAGAACTTCTaGCTCCATCGCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRGLLSLPSCRTQDHQPKGSQNF*LHRWLS
Trigger: GGACAGCCAGCGATGGAGCCAGAAGTTCTGAGAGCC...CTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CCCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGGGAGGACCTGAGGCTTaGCCAAAGCTGTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PRGLLSLPSCRTQDHQPKGGPEA*PKLSGV
Trigger: AACCCCAGACAGCTTTGGCCAAGCCTCAGGTCCTCC...CTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGACGGGCTTTCTGGGCTGCTaGAGATGGAAGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPIAQGVNGPSSCVWVWTGFLGC*RWKLCG
Trigger: GCCACAGAGCTTCCATCTCCAGCAGCCCAGAAAGCC...CGTCCATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp GTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGAGAGATGCTCACCCTGGAAAGGCGCTCCTaGGGACCCAGCTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VVSVLKRLGWGWGREMLTLERRS*GPSWCP
Trigger: GGGGCACCAGCTGGGTCCCCAGGAGCGCCTTTCCAG...GGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp CAGAGCGGGGCTACTTACTGGCTTGCTCCCCGTGGCTaGCTCAGCCTACCTTCTTGTAGAACCCAGGACCAC +
Preference number: 4 (lower is better)
Translates to: QSGATYWLAPRG*LSLPSCRTQDH
Trigger: GTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGGAGCAAGCCAGTAAGTAGCCCCGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp TCAGGACAGGAACTCACACAGGGCAGGAACCTGGAGGCAGGAGCTGAAGCAGACAAGCTCTGTGGCCACTaGCACACATGGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SGQELTQGRNLEAGAEADKLCGH*HTWAGS
Trigger: GCTTCCTGCCCATGTGTGTCAGTGGCCACAGAGCTT...GTCTGCTTCAGCTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGTTCCTGTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp CCAGGTGCCATGAGCCTGCTGTGGCCACCAATAGTCTCCAAGGCTTACGAGACTTCCCCTCTCGTCCTCTaGACTCTGGAGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PGAMSLLWPPIVSKAYETSPLVL*TLEQDQ
Trigger: CTGGTCCTGCTCCAGAGTGCAGAGGACGAGAGGGGA...AGTCTCGTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp GTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGAGAGATGCTCACCATGGGCAGGAAGCCGTaGTTCTTGGGTGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VVSVLKRLGWGWGREMLTMGRKP*FLGGRA
Trigger: GGCCCGGCCACCCAAGAAGCACGGCTTCCTGCCCAT...GGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp GACAATGTCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCTGGGGACCCAGCTGGTaGCCCTCCTGCAGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: DNVQGLERALSGKTSPVPWGPSW*PSCSLR
Trigger: ACGGAGGCTGCAGGAGGGGCACCAGCTGGGTCCCCA...GGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGACATTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CCCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGCATGGTCTCCTTCAGTaGGCAAGGCCTGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PRGLLSLPSCRTQDHQPKHGLLQ*ARPEEG
Trigger: ACCTTCCTCAGGCCTTGCCCACTGAAGGAGACCATG...CTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp AGCCTCCAGGTTCACTCGATGAAGCCTGACCTCCTAACCCCATTCCAGTGCCGATGCGCCCTGTGCCTCTaGAAAGTGAGATGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLQVHSMKPDLLTPFQCRCALCL*KVRWAL
Trigger: GAGAGCCCATCTCACTTTGCAGAGGCACAGGGCGCA...TCGGCACTGGAATGGGGTTAGGAGGTCAGGCTTCATCGAGTGAACCTGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp CATTCTTGCCTGCAGGGAATCACAAAAGTGGGCCATCCTATGGGGGTCTTCCGGGGCGGTTGCGCCCTGTaGCTCTGCAAAGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: HSCLQGITKVGHPMGVFRGGCAL*LCKVRW
Trigger: CCATCTCACTTTGCAGAGGCACAGGGCGCAACCGCC...CCGGAAGACCCCCATAGGATGGCCCACTTTTGTGATTCCCTGCAGGCAAGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp ACTCACTCTGCCACCCAGGCTTTGATACCCTCCCCCATGGTCACACTTTCCTGCTTTCTTGGTGTCTTCTaGGGGGCCCTGCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: THSATQALIPSPMVTLSCFLGVF*GALLTG
Trigger: CCCAGTGAGCAGGGCCCCCCAGAAGACACCAAGAAA...GCAGGAAAGTGTGACCATGGGGGAGGGTATCAAAGCCTGGGTGGCAGAGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CCCGTGGCTTGCTCAGCCTACCTTCTTGTAGAACCCAGGACCACCAGCCCAAGGTCTGGGGTTTCAGCATaGTCTCCTTCAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PVACSAYLLVEPRTTSPRSGVSA*SPSVGK
Trigger: CTTGCCCACTGAAGGAGACCATGCTGAAACCCCAGA...CCTTGGGCTGGTGGTCCTGGGTTCTACAAGAAGGTAGGCTGAGCAAGCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp TTCAGCCCAGGTGCCATGAGCCTGCTGTGGCCACCAATAGTCTCCAAGGCTTACATGGCAGCTGGTGTGTaGAGCTCAGAGGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: FSPGAMSLLWPPIVSKAYMAAGV*SSEGWE
Trigger: CTCCCATCCCTCTGAGCTCCACACACCAGCTGCCAT...GTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGGGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp TCAGGACAGGAACTCACACAGGGCAGGAACCTGGAGGCAGGAGCTGAAGCAGACTCGTCCTCTGCACTCTaGAGCAGGACCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: SGQELTQGRNLEAGAEADSSSAL*SRTRIF
Trigger: GAAGATCCTGGTCCTGCTCCAGAGTGCAGAGGACGA...GTCTGCTTCAGCTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGTTCCTGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp ACAAGGCAGATCGAACTGGAGGCGGGATACCGGGGATaGACCTCTGACCTACACTACCTCCCTCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: TRQIELEAGYRG*TSDLHYLPPPS
Trigger: ACTGGGTGGAGGGAGGTAGTGTAGGTCAGAGGTCAATCCCCGGTATCCCGCCTCCAGTTCGATCTGCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp CGGGGCTGGAGAGATGGCTCAGTGGATAAGAGGGCATaGACTGCTCTTCCAGAGGCCCCAGGTTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: RGWRDGSVDKRA*TALPEAPGSIP
Trigger: GGGAATTGAACCTGGGGCCTCTGGAAGAGCAGTCAATGCCCTCTTATCCACTGAGCCATCTCTCCAGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp AGCCTCCAGGTTCACTCGATGAAGCCTGACCTCCTAACCCCATTCCAGTGCCGACCAGGATCTTCCGCCTaGATTCTCTGGATTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SLQVHSMKPDLLTPFQCRPGSSA*ILWIRR
Trigger: CCTCCGAATCCAGAGAATTCAGGCGGAAGATCCTGG...TCGGCACTGGAATGGGGTTAGGAGGTCAGGCTTCATCGAGTGAACCTGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp TGGCACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGACCCTCATCTGGTGTGTaGCTCCTGGCCTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: WHTAVVSVLKRLGWGWGRPSSGV*LLAWKG
Trigger: GCCTTTCCAGGCCAGGAGTCACACACCAGATGAGGG...TCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp GTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGAGAGATGCTCACCAGCTGGTGCCCCTCCTaGAGCCTCCGTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VVSVLKRLGWGWGREMLTSWCPS*SLRLLE
Trigger: TTCCAGAAGACGGAGGCTGCAGGAGGGGCACCAGCT...GGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCTGCAGATGGTGCAGCTaGGGGTGGCCGCAAACTTGT +
Preference number: 4 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGCRWCS*GWPQTC
Trigger: ACAAGTTTGCGGCCACCCGCAGCTGCACCATCTGCA...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp GTGGTGGCACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGCCTTTGACGCCCTGCTaGCCTTTTCTCTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VVAHSCSLSTQETRVGLGPLTPC*PFLWAL
Trigger: AAGAGCCCAGAGAAAAGGCCAGCAGGGCGTCAAAGG...CCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTGCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp GTGGTGGCACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGCCTGGTCAGGCTTCCTaGGGTCCTCTTCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: VVAHSCSLSTQETRVGLGPGQAS*GPLLME
Trigger: CTCCATTAGAAGAGGACCCCAGGAAGCCTGACCAGG...CCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTGCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp AGCTTGTGTCAAGTTGACACACAACCATCCAGCACAGACAGGATGAAGGCTGCACGTGCGATTTCTTCCTaGGGGCTGGCTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLCQVDTQPSSTDRMKAARAISS*GLAPRL
Trigger: CAGCCGAGGAGCCAGCCCTCAGGAAGAAATCGCACG...TGCAGCCTTCATCCTGTCTGTGCTGGATGGTTGTGTGTCAACTTGACACAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp TTTCCTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGGCTATAGGTTTCCTGTaGCTGTGCTTCTTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FPANSPGSQWPQLLCVGMAIGFL*LCFLRL
Trigger: CAGCCGCAAGAAGCACAGTCACAGGAAACCTATAGC...CATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp ATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAACAGAGGCTCCTTTCTCTCTGCCTCCTGCGCTTaGGCTTCCTGCTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: MPYSWISWRHFLNRGSFLSASCA*ASCSPL
Trigger: GAGGGGAGAGCAGGAAGCTCAAGCGCAGGAGGCAGA...GAGAAAGGAGCCTCTGTTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCTTCCCTTTGACGCCCTaGTGGCCTTTTCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGFPLTP*WPFLWA
Trigger: AGCCCAGAGAAAAGGCCAGCAGGGCGTCAAAGGGAA...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp TGGCACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGAGGGGCATCCCTTGGCTaGGATTCCTTGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WHTAVVSVLKRLGWGWGRGASLG*DSLIWA
Trigger: TGCCCAGATCAAGGAATCCCAGCCAAGGGATGCCCC...TCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp TTTCCTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGTTGGCCAAAGCTGTCTaGGGTTTCAGCATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FPANSPGSQWPQLLCVGMLAKAV*GFSMVS
Trigger: GGAGACCATGCTGAAACCCCAGACAGCTTTGGCCAA...CATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp GCTCCTGACCCTTGTTTCAAAAATTTAGTTCCCGGGGCTGGAGAGATGGCTCAGCTGGTGTGTGACTCCTaGCCTGGAAAGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: APDPCFKNLVPGAGEMAQLVCDS*PGKALL
Trigger: CAGGAGCGCCTTTCCAGGCCAGGAGTCACACACCAG...CTGAGCCATCTCTCCAGCCCCGGGAACTAAATTTTTGAAACAAGGGTCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp TTTCCTGCCAATAGCCCAGGGAGTCAATGGCCCCAGCTCCTGTGTGTGGGTATGCAGAGGCAGGCTTCTTaGGGGATAAGACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPANSPGSQWPQLLCVGMQRQAS*GIRLSS
Trigger: TGAAGAGAGTCTTATCCCTCAAGAAGCCTGCCTCTG...CATACCCACACACAGGAGCTGGGGCCATTGACTCCCTGGGCTATTGGCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp GTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGAGAGATGCTCACCTCCCTGTCCACCTCTTaGAGACTCGCCACGAGCTTT +
Preference number: 4 (lower is better)
Translates to: VVSVLKRLGWGWGREMLTSLSTS*RLATSF
Trigger: AAAGCTCGTGGCGAGTCTCCAAGAGGTGGACAGGGA...GGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp TGGCACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGACCACAATCTGCCAGATaGCATCATCCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: WHTAVVSVLKRLGWGWGRPQSAR*HHPGQA
Trigger: AGCCTGACCAGGATGATGTCATCTGGCAGATTGTGG...TCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCGGTCTCCAGCTTTCTTaGGCAATTCCACAATCTGCC +
Preference number: 4 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGGLQLS*AIPQSA
Trigger: GGCAGATTGTGGAATTGCTCAAGAAAGCTGGAGACC...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp TCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGCAGGCTGTGCTTCTTGCGGCTaGTTCTCTTCTCGTGCGATT +
Preference number: 4 (lower is better)
Translates to: SKVWSEHSVVKQALFPAGCASCG*FSSRAI
Trigger: AATCGCACGAGAAGAGAACCAGCCGCAAGAAGCACA...GCCTGCTGGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp AGCCTCCAGGTTCACTCGATGAAGCCTGACCTCCTAACCCCATTCCAGTGCCGATGCTCTTCTTCCAGTTaGTCTCCAGCTTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SLQVHSMKPDLLTPFQCRCSSSS*SPAFLS
Trigger: GCTCAAGAAAGCTGGAGACCAACTGGAAGAAGAGCA...TCGGCACTGGAATGGGGTTAGGAGGTCAGGCTTCATCGAGTGAACCTGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp TGGCACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGATGTGACTGTGCTTCTTaGGGCTGGTTCTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: WHTAVVSVLKRLGWGWGRCDCAS*GWFSSR
Trigger: ACGAGAAGAGAACCAGCCGCAAGAAGCACAGTCACA...TCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp ATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAACAGAGGCTCCTTTCTCCAGATGACATCATCCTaGTCAGGCTTCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: MPYSWISWRHFLNRGSFLQMTSS*SGFLGS
Trigger: GGACCCCAGGAAGCCTGACCAGGATGATGTCATCTG...GAGAAAGGAGCCTCTGTTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp ATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAACAGAGGCTCCTTTCTCTGGAGCTCAGAGGGATaGGAGCCTCCACCATCTACA +
Preference number: 4 (lower is better)
Translates to: MPYSWISWRHFLNRGSFLWSSEG*EPPPST
Trigger: TGTAGATGGTGGAGGCTCCCATCCCTCTGAGCTCCA...GAGAAAGGAGCCTCTGTTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR TCA 90 bp GACAATGTCCAAGGTTTGGAGCGAGCACTCAGTGGTAAAACAAGCCCTGTTCCCAGAGCCTGGAGTCCCTaGAGCCTCTGTTTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: DNVQGLERALSGKTSPVPRAWSP*SLCFLR
Trigger: TCTAAGAAAACAGAGGCTTCAGGGACTCCAGGCTCT...GGGAACAGGGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGACATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp CATTCTTGCCTGCAGGGAATCACAAAAGTGGGCCATCCTATGGGGGTCTTCCGGAGCAATTCCACAATCTaGCAGATGACATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: HSCLQGITKVGHPMGVFRSNSTI*QMTSSW
Trigger: CCAGGATGATGTCATCTGGCAGATTGTGGAATTGCT...CCGGAAGACCCCCATAGGATGGCCCACTTTTGTGATTCCCTGCAGGCAAGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp CCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACACACAACCATCCAGCACCAGGCTTTCTGGGCTaGTGGAGATGGAAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PFSVITPACVKLTHNHPAPGFLG*WRWKLC
Trigger: ACAGAGCTTCCATCTCCAGCAGCCCAGAAAGCCTGG...TGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp ATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAACAGAGGCTCCTTTCTCCTCTGCAAAGTGAGATaGGCTCTCAGAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: MPYSWISWRHFLNRGSFLLCKVR*ALRTSG
Trigger: GCCAGAAGTTCTGAGAGCCCATCTCACTTTGCAGAG...GAGAAAGGAGCCTCTGTTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp AGCTTGTGTCAAGTTGACACACAACCATCCAGCACAGACAGGATGAAGGCTGCACTGGACTTCTTCTCCTaGGATTTCTTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SLCQVDTQPSSTDRMKAALDFFS*DFFLGS
Trigger: ACTCCCCAGGAAGAAATCCCAGGAGAAGAAGTCCAG...TGCAGCCTTCATCCTGTCTGTGCTGGATGGTTGTGTGTCAACTTGACACAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CCA 90 bp CCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACACACAACCATCCAGCAGAACTCCAGGCTTTCTaGGCTGCTGGAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: PFSVITPACVKLTHNHPAELQAF*AAGDGS
Trigger: GCTTCCATCTCCAGCAGCCCAGAAAGCCTGGAGTTC...TGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp ATGCTGAGCGCACAGAGAATTGTCCATGGTCCATTCTaGCCTGCAGGGAATCACAAAAGTGGGCCATCCTAT +
Preference number: 4 (lower is better)
Translates to: MLSAQRIVHGPF*PAGNHKSGPSY
Trigger: ATAGGATGGCCCACTTTTGTGATTCCCTGCAGGCAAGAATGGACCATGGACAATTCTCTGTGCGCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR GCA 90 bp CCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACACACAACCATCCAGCACAAACTTGTTCAGTGTaGCAAAGGCACAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PFSVITPACVKLTHNHPAQTCSV*QRHRVA
Trigger: CGCCACCCTGTGCCTTTGGCACACTGAACAAGTTTG...TGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp CTCAACAGAGGCTCCTTTCTCTGTGATAACTCCAGCTaGTGTCAAGTTGACACACAACCATCCAGCACAGAC +
Preference number: 4 (lower is better)
Translates to: LNRGSFLCDNSS*CQVDTQPSSTD
Trigger: GTCTGTGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGGAGCCTCTGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp TCGGGAGTGACGTGGCAGAGACACAGCTACAGCTATTaGAATGCATGTGTGTTTTCCAGCTGGAAACTGAAT +
Preference number: 4 (lower is better)
Translates to: SGVTWQRHSYSY*NACVFSSWKLN
Trigger: ATTCAGTTTCCAGCTGGAAAACACACATGCATTCAAATAGCTGTAGCTGTGTCTCTGCCACGTCACTCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp CACACAACACCATCTTTTGAAAAGTCACTCAAAGCTTaGGCTCTTGCACGTCCATGCCACACCCAAGAATAC +
Preference number: 4 (lower is better)
Translates to: HTTPSFEKSLKA*ALARPCHTQEY
Trigger: GTATTCTTGGGTGTGGCATGGACGTGCAAGAGCCAAAGCTTTGAGTGACTTTTCAAAAGATGGTGTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
3UTR CAA 72 bp ACAAAAATAACCCACCAATGCACACAACACCATCTTTaGAAAAGTCACTCAAAGCTTTGGCTCTTGCACGTC +
Preference number: 4 (lower is better)
Translates to: TKITHQCTQHHL*KSHSKLWLLHV
Trigger: GACGTGCAAGAGCCAAAGCTTTGAGTGACTTTTCAAAAGATGGTGTTGTGTGCATTGGTGGGTTATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 90 bp CTGCTCACTGGGGAGAAATCCGCGCCCCTCTCCCGGAGGGAGGGCTaGGGCGGTTGCGCCCTGTGCCTCTGCAAAGTGAGATGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LLTGEKSAPLSRREG*GGCALCLCKVRWAL
Trigger: GAGAGCCCATCTCACTTTGCAGAGGCACAGGGCGCAACCGCCGCAGCCCTCCCTCCGGGAGAGGGGCGCGGATTTCTCCCCAGTGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp CTCCATCGCTGGCTGTCCTCCTGCAGGTGGCGCTGGAGGGGCACCTaGTGTTCGAGGACTCGGGGTCCTTCTTCCTGGGAACCTGCCGGT +
Preference number: 5 (lower is better)
Translates to: LHRWLSSCRWRWRGT*CSRTRGPSSWEPAG
Trigger: ACCGGCAGGTTCCCAGGAAGAAGGACCCCGAGTCCTCGAACACCAGGTGCCCCTCCAGCGCCACCTGCAGGAGGACAGCCAGCGATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp AGGCCCCTCATCTGGTGTGTGACTCCTGGCCTGGAAAGGCGCTCCTaGGGACCCAGCTGGTGCCCCTCCTGCAGCCTCCGTCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: RPLIWCVTPGLERRS*GPSWCPSCSLRLLE
Trigger: TTCCAGAAGACGGAGGCTGCAGGAGGGGCACCAGCTGGGTCCCCAGGAGCGCCTTTCCAGGCCAGGAGTCACACACCAGATGAGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 90 bp GAGATGGGCTCTCAGAACTTCTGGCTCCATCGCTGGCTGTCCTCCTaGAGGTGGCGCTGGAGGGGCACCTGGTGTTCGAGGACTCGGGGT +
Preference number: 5 (lower is better)
Translates to: EMGSQNFWLHRWLSS*RWRWRGTWCSRTRG
Trigger: ACCCCGAGTCCTCGAACACCAGGTGCCCCTCCAGCGCCACCTGCAGGAGGACAGCCAGCGATGGAGCCAGAAGTTCTGAGAGCCCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 90 bp TGTGTGACTCCTGGCCTGGAAAGGCGCTCCTGGGGACCCAGCTGGTaGCCCTCCTGCAGCCTCCGTCTTCTGGAACTCCAGGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CVTPGLERRSWGPSW*PSCSLRLLELQAFW
Trigger: CCAGAAAGCCTGGAGTTCCAGAAGACGGAGGCTGCAGGAGGGGCACCAGCTGGGTCCCCAGGAGCGCCTTTCCAGGCCAGGAGTCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 90 bp GAGATGGAAGCTCTGTGGCCACTGACACACATGGGCAGGAAGCCGTaGTTCTTGGGTGGCCGGGCCTCTAGGCTGCCAGAGCCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: EMEALWPLTHMGRKP*FLGGRASRLPEPGV
Trigger: GACTCCAGGCTCTGGCAGCCTAGAGGCCCGGCCACCCAAGAAGCACGGCTTCCTGCCCATGTGTGTCAGTGGCCACAGAGCTTCCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp TTGCGCCCTGTGCCTCTGCAAAGTGAGATGGGCTCTCAGAACTTCTaGCTCCATCGCTGGCTGTCCTCCTGCAGGTGGCGCTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LRPVPLQSEMGSQNF*LHRWLSSCRWRWRG
Trigger: GCCCCTCCAGCGCCACCTGCAGGAGGACAGCCAGCGATGGAGCCAGAAGTTCTGAGAGCCCATCTCACTTTGCAGAGGCACAGGGCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp CCTCTGCAAAGTGAGATGGGCTCTCAGAACTTCTGGCTCCATCGCTaGCTGTCCTCCTGCAGGTGGCGCTGGAGGGGCACCTGGTGTTCG +
Preference number: 5 (lower is better)
Translates to: PLQSEMGSQNFWLHR*LSSCRWRWRGTWCS
Trigger: CGAACACCAGGTGCCCCTCCAGCGCCACCTGCAGGAGGACAGCCAGCGATGGAGCCAGAAGTTCTGAGAGCCCATCTCACTTTGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp TTCAGCCCAGGTGCCATGAGCCTGCTGTGGCCACCAATAGTCTCCAAGGCTTACAGGAAGCTGGGCCTCTaGGGCCGGGTTTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: FSPGAMSLLWPPIVSKAYRKLGL*GRVSGP
Trigger: GGGCCCAGAAACCCGGCCCAAGAGGCCCAGCTTCCT...GTAAGCCTTGGAGACTATTGGTGGCCACAGCAGGCTCATGGCACCTGGGCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp CGGAGGCTCTGTCCAGCAGTGGCTTCTCCTCGGGTCCCTGAAATATaGCAGCTGGTGTGTGGAGCTCAGAGGGATGGGAGCCTCCACCAT +
Preference number: 5 (lower is better)
Translates to: RRLCPAVASPRVPEI*QLVCGAQRDGSLHH
Trigger: ATGGTGGAGGCTCCCATCCCTCTGAGCTCCACACACCAGCTGCCATATTTCAGGGACCCGAGGAGAAGCCACTGCTGGACAGAGCCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp TCTCCGGAGGTTAGACTTCTTCACCTGGGACTTCACCTTGCCGGCTaGGGTCGGGTTTTCTCCGGCCTTCTCTGCCTCCTGCGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SPEVRLLHLGLHLAG*GRVFSGLLCLLRLS
Trigger: GCTCAAGCGCAGGAGGCAGAGAAGGCCGGAGAAAACCCGACCCCAGCCGGCAAGGTGAAGTCCCAGGTGAAGAAGTCTAACCTCCGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS TCA 90 bp CTGGATTCGGAGGCTCTGTCCAGCAGTGGCTTCTCCTCGGGTCCCTaGAATATGGCAGCTGGTGTGTGGAGCTCAGAGGGATGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LDSEALSSSGFSSGP*NMAAGVWSSEGWEP
Trigger: AGGCTCCCATCCCTCTGAGCTCCACACACCAGCTGCCATATTTCAGGGACCCGAGGAGAAGCCACTGCTGGACAGAGCCTCCGAATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp AGCTCAGAGGGATGGGAGCCTCCACCATCTACAGACGGGACCTCTTaGAACTCAGGCGCCTCCAAGTCAAGGCTGCTGGAGGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: SSEGWEPPPSTDGTS*NSGASKSRLLEVEA
Trigger: AGCTTCCACCTCCAGCAGCCTTGACTTGGAGGCGCCTGAGTTCCAAGAGGTCCCGTCTGTAGATGGTGGAGGCTCCCATCCCTCTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS CCA 90 bp TTTCTTCCTGGGGAGTGGCGTTGGCTTTCGTGGAGGAACCGCTTCTaGCTGAGGGATTTGCACTTGCGGGAGCTGCAGCAGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FLPGEWRWLSWRNRF*LRDLHLRELQQLCR
Trigger: CCTGCAGAGCTGCTGCAGCTCCCGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACGCCACTCCCCAGGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228025.2
CDS GCA 90 bp CTCTCGGCCTTGCGCTTCAGCGGTCTGGGGACCCGGAGGCTCTTCTaGTATAGGTTTCCTGTGACTGTGCTTCTTGCGGCTGGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LSALRFSGLGTRRLF*YRFPVTVLLAAGSL
Trigger: AAGAGAACCAGCCGCAAGAAGCACAGTCACAGGAAACCTATAGCAGAAGAGCCTCCGGGTCCCCAGACCGCTGAAGCGCAAGGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp GTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTAGAGAGATGCTCACCAGGAAGCCGTGCTTCTaGGGTGGCCGGGCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: VVSVLKRLGWGWGREMLTRKPCF*GGRASR
Trigger: CCTAGAGGCCCGGCCACCCAAGAAGCACGGCTTCCT...GGTGAGCATCTCTCTACCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 90 bp TGTGTCCCTTGTATTCGCCTCTGGACTGCATCAGGGTGCAGATGGTaGAGCTGCGGGTGGCCGCAAACTTGTTCAGTGTGCCAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: CVPCIRLWTASGCRW*SCGWPQTCSVCQRH
Trigger: GTGCCTTTGGCACACTGAACAAGTTTGCGGCCACCCGCAGCTGCACCATCTGCACCCTGATGCAGTCCAGAGGCGAATACAAGGGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp TCTGTCCAGCAGTGGCTTCTCCTCGGGTCCCTGAAATATGGCAGCTaGTGTGTGGAGCTCAGAGGGATGGGAGCCTCCACCATCTACAGA +
Preference number: 5 (lower is better)
Translates to: SVQQWLLLGSLKYGS*CVELRGMGASTIYR
Trigger: TCTGTAGATGGTGGAGGCTCCCATCCCTCTGAGCTCCACACACCAGCTGCCATATTTCAGGGACCCGAGGAGAAGCCACTGCTGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS TCA 90 bp GAGCTTTTGGATCATGAACTCCTTAGATTCCCAGGCTCGCTCTGGTaGAGGCCCCTCATCTGGTGTGTGACTCCTGGCCTGGAAAGGCGC +
Preference number: 5 (lower is better)
Translates to: ELLDHELLRFPGSLW*RPLIWCVTPGLERR
Trigger: GCGCCTTTCCAGGCCAGGAGTCACACACCAGATGAGGGGCCTTCACCAGAGCGAGCCTGGGAATCTAAGGAGTTCATGATCCAAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp GATCTTCCGCCTGAATTCTCTGGATTCGGAGGCTCTGTCCAGCAGTaGCTTCTCCTCGGGTCCCTGAAATATGGCAGCTGGTGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: DLPPEFSGFGGSVQQ*LLLGSLKYGSWCVE
Trigger: CTCCACACACCAGCTGCCATATTTCAGGGACCCGAGGAGAAGCCACTGCTGGACAGAGCCTCCGAATCCAGAGAATTCAGGCGGAAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS TCA 90 bp CCTTTGACGCCCTGCTGGCCTTTTCTCTGGGCTCTTCTATCCTCATaGGTAAGATATTCAGCACCAGCCTCAGCCAGCTCTGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PLTPCWPFLWALLSS*VRYSAPASASSAGP
Trigger: AGGCCCAGCAGAGCTGGCTGAGGCTGGTGCTGAATATCTTACTCATGAGGATAGAAGAGCCCAGAGAAAAGGCCAGCAGGGCGTCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS TCA 90 bp TTCCTGGGGAGTGGCGTTGGCTTTCGTGGAGGAACCGCTTCTGGCTaGGGGATTTGCACTTGCTCTTCTTCCAGTTGGTCTCCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: FLGSGVGFRGGTASG*GICTCSSSSWSPAF
Trigger: GAAAGCTGGAGACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACGCCACTCCCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 90 bp CTGGGGTACTTCCGGATCTGCCTCCCTAGATCCCTGTCCACCTCTTaGAGACTCGCCACGAGCTTTTGGATCATGAACTCCTTAGATTCC +
Preference number: 5 (lower is better)
Translates to: LGYFRICLPRSLSTS*RLATSFWIMNSLDS
Trigger: GGAATCTAAGGAGTTCATGATCCAAAAGCTCGTGGCGAGTCTCCAAGAGGTGGACAGGGATCTAGGGAGGCAGATCCGGAAGTACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp AGCCTCCAGGTTCACTCGATGAAGCCTGACCTCCTAACCCCATTCCAGTGCCGACTGAGGGATTTGCACTaGCTCTTCTTCCAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SLQVHSMKPDLLTPFQCRLRDLH*LFFQLV
Trigger: GACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAG...TCGGCACTGGAATGGGGTTAGGAGGTCAGGCTTCATCGAGTGAACCTGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp GTGGTGGCACACAGCTGTAGTCTCAGTACTCAAGAGACTAGGGTGGGGTTGGGGTTCTGGCTGAGGGATTaGCACTTGCTCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VVAHSCSLSTQETRVGLGFWLRD*HLLFFQ
Trigger: CTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAA...CCCCAACCCCACCCTAGTCTCTTGAGTACTGAGACTACAGCTGTGTGCCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp CCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACACACAACCATCCAGCAGCTGTGCCGACTCTCTaGGGTTCCTCAGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PFSVITPACVKLTHNHPAAVPTL*GSSEAG
Trigger: GCCTGCCTCTGAGGAACCCAAGAGAGTCGGCACAGC...TGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp CATTCTTGCCTGCAGGGAATCACAAAAGTGGGCCATCCTATGGGGGTCTTCCGGACTCGCCACGAGCTTTaGGATCATGAACTCCTTAGA +
Preference number: 5 (lower is better)
Translates to: HSCLQGITKVGHPMGVFRTRHEL*DHELLR
Trigger: TCTAAGGAGTTCATGATCCAAAAGCTCGTGGCGAGT...CCGGAAGACCCCCATAGGATGGCCCACTTTTGTGATTCCCTGCAGGCAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 90 bp TCTTCTTCCAGTTGGTCTCCAGCTTTCTTGAGCAATTCCACAATCTaGCAGATGACATCATCCTGGTCAGGCTTCCTGGGGTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSSSWSPAFLSNSTI*QMTSSWSGFLGSSS
Trigger: AGAAGAGGACCCCAGGAAGCCTGACCAGGATGATGTCATCTGGCAGATTGTGGAATTGCTCAAGAAAGCTGGAGACCAACTGGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp GCTCCTGACCCTTGTTTCAAAAATTTAGTTCCCGGGGCTGGAGAGATGGCTCAGTTGCTCTTCTTCCAGTaGGTCTCCAGCTTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: APDPCFKNLVPGAGEMAQLLFFQ*VSSFLE
Trigger: CTCAAGAAAGCTGGAGACCAACTGGAAGAAGAGCAA...CTGAGCCATCTCTCCAGCCCCGGGAACTAAATTTTTGAAACAAGGGTCAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS-3UTR CAA 90 bp CCTTTCTCTGTGATAACTCCAGCTTGTGTCAAGTTGACACACAACCATCCAGCATCAGAGGCAGGCTTCTaGAGGGATAAGACTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PFSVITPACVKLTHNHPASEAGF*RDKTLF
Trigger: GAAGAGAGTCTTATCCCTCAAGAAGCCTGCCTCTGA...TGCTGGATGGTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp GGGGAGAAATCCGCGCCCCTCTCCCGGAGGGAGGGCTaGGGCGGTTGCGCCCTGTGCCTCTGCAAAGTGAGA +
Preference number: 6 (lower is better)
Translates to: GEKSAPLSRREG*GGCALCLCKVR
Trigger: TCTCACTTTGCAGAGGCACAGGGCGCAACCGCCGCAGCCCTCCCTCCGGGAGAGGGGCGCGGATTTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp TGGCTCCATCGCTGGCTGTCCTCCTGCAGGTGGCGCTaGAGGGGCACCTGGTGTTCGAGGACTCGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: WLHRWLSSCRWR*RGTWCSRTRGP
Trigger: AGGACCCCGAGTCCTCGAACACCAGGTGCCCCTCCAGCGCCACCTGCAGGAGGACAGCCAGCGATGGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp TCGGGGTCTCCACCGGGCTCAGACCACAGGAGTCGCTaGTGTCCCGGGGCATCCCTTGGCTGGGATTCCTTG +
Preference number: 6 (lower is better)
Translates to: SGSPPGSDHRSR*CPGASLGWDSL
Trigger: CAAGGAATCCCAGCCAAGGGATGCCCCGGGACAGCAGCGACTCCTGTGGTCTGAGCCCGGTGGAGACCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp ACTCCTGGCCTGGAAAGGCGCTCCTGGGGACCCAGCTaGTGCCCCTCCTGCAGCCTCCGTCTTCTGGAACTC +
Preference number: 6 (lower is better)
Translates to: TPGLERRSWGPS*CPSCSLRLLEL
Trigger: GAGTTCCAGAAGACGGAGGCTGCAGGAGGGGCACCAGCTGGGTCCCCAGGAGCGCCTTTCCAGGCCAGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp ATCTGGTGTGTGACTCCTGGCCTGGAAAGGCGCTCCTaGGGACCCAGCTGGTGCCCCTCCTGCAGCCTCCGT +
Preference number: 6 (lower is better)
Translates to: IWCVTPGLERRS*GPSWCPSCSLR
Trigger: ACGGAGGCTGCAGGAGGGGCACCAGCTGGGTCCCCAGGAGCGCCTTTCCAGGCCAGGAGTCACACACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp CGGAGGGAGGGCTGCGGCGGTTGCGCCCTGTGCCTCTaGAAAGTGAGATGGGCTCTCAGAACTTCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: RREGCGGCALCL*KVRWALRTSGS
Trigger: GGAGCCAGAAGTTCTGAGAGCCCATCTCACTTTGCAGAGGCACAGGGCGCAACCGCCGCAGCCCTCCCTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp GCTCTGTGGCCACTGACACACATGGGCAGGAAGCCGTaGTTCTTGGGTGGCCGGGCCTCTAGGCTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: ALWPLTHMGRKP*FLGGRASRLPE
Trigger: CTCTGGCAGCCTAGAGGCCCGGCCACCCAAGAAGCACGGCTTCCTGCCCATGTGTGTCAGTGGCCACAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp GAAAGGCGCTCCTGGGGACCCAGCTGGTGCCCCTCCTaGAGCCTCCGTCTTCTGGAACTCCAGGCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: ERRSWGPSWCPS*SLRLLELQAFW
Trigger: CCAGAAAGCCTGGAGTTCCAGAAGACGGAGGCTGCAGGAGGGGCACCAGCTGGGTCCCCAGGAGCGCCTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp TGGCTGTCCTCCTGCAGGTGGCGCTGGAGGGGCACCTaGTGTTCGAGGACTCGGGGTCCTTCTTCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: WLSSCRWRWRGT*CSRTRGPSSWE
Trigger: TTCCCAGGAAGAAGGACCCCGAGTCCTCGAACACCAGGTGCCCCTCCAGCGCCACCTGCAGGAGGACAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp GGCCTCCCTCGGAAGCCTCTCTTTCTTGGTGTCTTCTaGGGGGCCCTGCTCACTGGGGAGAAATCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: GLPRKPLFLGVF*GALLTGEKSAP
Trigger: GGGCGCGGATTTCTCCCCAGTGAGCAGGGCCCCCCAGAAGACACCAAGAAAGAGAGGCTTCCGAGGGAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp GCTCTGGTGAAGGCCCCTCATCTGGTGTGTGACTCCTaGCCTGGAAAGGCGCTCCTGGGGACCCAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: ALVKAPHLVCDS*PGKALLGTQLV
Trigger: CACCAGCTGGGTCCCCAGGAGCGCCTTTCCAGGCCAGGAGTCACACACCAGATGAGGGGCCTTCACCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 72 bp TGGCCACTGACACACATGGGCAGGAAGCCGTGCTTCTaGGGTGGCCGGGCCTCTAGGCTGCCAGAGCCTGGA +
Preference number: 6 (lower is better)
Translates to: WPLTHMGRKPCF*GGRASRLPEPG
Trigger: TCCAGGCTCTGGCAGCCTAGAGGCCCGGCCACCCAAGAAGCACGGCTTCCTGCCCATGTGTGTCAGTGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp AGTGAGATGGGCTCTCAGAACTTCTGGCTCCATCGCTaGCTGTCCTCCTGCAGGTGGCGCTGGAGGGGCACC +
Preference number: 6 (lower is better)
Translates to: SEMGSQNFWLHR*LSSCRWRWRGT
Trigger: GGTGCCCCTCCAGCGCCACCTGCAGGAGGACAGCCAGCGATGGAGCCAGAAGTTCTGAGAGCCCATCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 90 bp GAAGCTCTGTGGCCACTGACACACATGGGCAGGAAGCCGTGCTTCTaGGGTGGCCGGGCCTCTAGGCTGCCAGAGCCTGGAGTCCCTGAA +
Preference number: 6 (lower is better)
Translates to: EALWPLTHMGRKPCF*GGRASRLPEPGVPE
Trigger: TTCAGGGACTCCAGGCTCTGGCAGCCTAGAGGCCCGGCCACCCAAGAAGCACGGCTTCCTGCCCATGTGTGTCAGTGGCCACAGAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 90 bp CGTTGGCTTTCGTGGAGGAACCGCTTCTGGCTGAGGGATTTGCACTaGCGGGAGCTGCAGCAGCTCTGCAGGCGCTCTCTGATGCCTGCG +
Preference number: 6 (lower is better)
Translates to: RWLSWRNRFWLRDLH*RELQQLCRRSLMPA
Trigger: CGCAGGCATCAGAGAGCGCCTGCAGAGCTGCTGCAGCTCCCGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228025.2
CDS TCA 72 bp AGGGCTGCGGCGGTTGCGCCCTGTGCCTCTGCAAAGTaGGATGGGCTCTCAGAACTTCTGGCTCCATCGCTG +
Preference number: 6 (lower is better)
Translates to: RAAAVAPCASAK*DGLSELLAPSL
Trigger: CAGCGATGGAGCCAGAAGTTCTGAGAGCCCATCTCACTTTGCAGAGGCACAGGGCGCAACCGCCGCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp GGAAGCCGTGCTTCTTGGGTGGCCGGGCCTCTAGGCTaGCAGAGCCTGGAGTCCCTGAAGCCTCTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: GSRASWVAGPLG*QSLESLKPLFS
Trigger: AGAAAACAGAGGCTTCAGGGACTCCAGGCTCTGGCAGCCTAGAGGCCCGGCCACCCAAGAAGCACGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp GACCCAGCTGGTGCCCCTCCTGCAGCCTCCGTCTTCTaGAACTCCAGGCTTTCTGGGCTGCTGGAGATGGAA +
Preference number: 6 (lower is better)
Translates to: DPAGAPPAASVF*NSRLSGLLEME
Trigger: TTCCATCTCCAGCAGCCCAGAAAGCCTGGAGTTCCAGAAGACGGAGGCTGCAGGAGGGGCACCAGCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 72 bp TCGTGGAGGAACCGCTTCTGGCTGAGGGATTTGCACTaGCGGGAGCTGCAGCAGCTCTGCAGGCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SWRNRFWLRDLH*RELQQLCRRSL
Trigger: CAGAGAGCGCCTGCAGAGCTGCTGCAGCTCCCGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228025.2
CDS CAA 90 bp GAGCTCAGAGGGATGGGAGCCTCCACCATCTACAGACGGGACCTCTaGGAACTCAGGCGCCTCCAAGTCAAGGCTGCTGGAGGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: ELRGMGASTIYRRDL*ELRRLQVKAAGGGS
Trigger: GCTTCCACCTCCAGCAGCCTTGACTTGGAGGCGCCTGAGTTCCAAGAGGTCCCGTCTGTAGATGGTGGAGGCTCCCATCCCTCTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS CCA 72 bp GTGCCTCTGCAAAGTGAGATGGGCTCTCAGAACTTCTaGCTCCATCGCTGGCTGTCCTCCTGCAGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: VPLQSEMGSQNF*LHRWLSSCRWR
Trigger: GCGCCACCTGCAGGAGGACAGCCAGCGATGGAGCCAGAAGTTCTGAGAGCCCATCTCACTTTGCAGAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp TGCGGCGGTTGCGCCCTGTGCCTCTGCAAAGTGAGATaGGCTCTCAGAACTTCTGGCTCCATCGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: CGGCALCLCKVR*ALRTSGSIAGC
Trigger: ACAGCCAGCGATGGAGCCAGAAGTTCTGAGAGCCCATCTCACTTTGCAGAGGCACAGGGCGCAACCGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp GGATGGGAGCCTCCACCATCTACAGACGGGACCTCTTaGAACTCAGGCGCCTCCAAGTCAAGGCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: GWEPPPSTDGTS*NSGASKSRLLE
Trigger: CTCCAGCAGCCTTGACTTGGAGGCGCCTGAGTTCCAAGAGGTCCCGTCTGTAGATGGTGGAGGCTCCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS CCA 72 bp CAGTGGCTTCTCCTCGGGTCCCTGAAATATGGCAGCTaGTGTGTGGAGCTCAGAGGGATGGGAGCCTCCACC +
Preference number: 6 (lower is better)
Translates to: QWLLLGSLKYGS*CVELRGMGAST
Trigger: GGTGGAGGCTCCCATCCCTCTGAGCTCCACACACCAGCTGCCATATTTCAGGGACCCGAGGAGAAGCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS TCA 72 bp GAGGCTCTGTCCAGCAGTGGCTTCTCCTCGGGTCCCTaGAATATGGCAGCTGGTGTGTGGAGCTCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: EALSSSGFSSGP*NMAAGVWSSEG
Trigger: TCCCTCTGAGCTCCACACACCAGCTGCCATATTTCAGGGACCCGAGGAGAAGCCACTGCTGGACAGAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp TGTCCAGCAGTGGCTTCTCCTCGGGTCCCTGAAATATaGCAGCTGGTGTGTGGAGCTCAGAGGGATGGGAGC +
Preference number: 6 (lower is better)
Translates to: CPAVASPRVPEI*QLVCGAQRDGS
Trigger: GCTCCCATCCCTCTGAGCTCCACACACCAGCTGCCATATTTCAGGGACCCGAGGAGAAGCCACTGCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp GTTAGACTTCTTCACCTGGGACTTCACCTTGCCGGCTaGGGTCGGGTTTTCTCCGGCCTTCTCTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: VRLLHLGLHLAG*GRVFSGLLCLL
Trigger: CAGGAGGCAGAGAAGGCCGGAGAAAACCCGACCCCAGCCGGCAAGGTGAAGTCCCAGGTGAAGAAGTCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp TCCTGCAGCCTCCGTCTTCTGGAACTCCAGGCTTTCTaGGCTGCTGGAGATGGAAGCTCTGTGGCCACTGAC +
Preference number: 6 (lower is better)
Translates to: SCSLRLLELQAF*AAGDGSSVATD
Trigger: GTCAGTGGCCACAGAGCTTCCATCTCCAGCAGCCCAGAAAGCCTGGAGTTCCAGAAGACGGAGGCTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 90 bp TTGGGCCGGGTTTCTGGGCCCAGGGTAGTGGCTGTGCCGACTCTCTaGGGTTCCTCAGAGGCAGGCTTCTTGAGGGATAAGACTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LGRVSGPRVVAVPTL*GSSEAGFLRDKTLF
Trigger: GAAGAGAGTCTTATCCCTCAAGAAGCCTGCCTCTGAGGAACCCAAGAGAGTCGGCACAGCCACTACCCTGGGCCCAGAAACCCGGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS TCA 72 bp CCTCTGCACTCTGGAGCAGGACCAGGATCTTCCGCCTaGATTCTCTGGATTCGGAGGCTCTGTCCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: PLHSGAGPGSSA*ILWIRRLCPAV
Trigger: CACTGCTGGACAGAGCCTCCGAATCCAGAGAATTCAGGCGGAAGATCCTGGTCCTGCTCCAGAGTGCAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp TTGCGCTTCAGCGGTCTGGGGACCCGGAGGCTCTTCTaGTATAGGTTTCCTGTGACTGTGCTTCTTGCGGCT +
Preference number: 6 (lower is better)
Translates to: LRFSGLGTRRLF*YRFPVTVLLAA
Trigger: AGCCGCAAGAAGCACAGTCACAGGAAACCTATAGCAGAAGAGCCTCCGGGTCCCCAGACCGCTGAAGCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp TGTATTCGCCTCTGGACTGCATCAGGGTGCAGATGGTaGAGCTGCGGGTGGCCGCAAACTTGTTCAGTGTGC +
Preference number: 6 (lower is better)
Translates to: CIRLWTASGCRW*SCGWPQTCSVC
Trigger: GCACACTGAACAAGTTTGCGGCCACCCGCAGCTGCACCATCTGCACCCTGATGCAGTCCAGAGGCGAATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp TGTGTCCCTTGTATTCGCCTCTGGACTGCATCAGGGTaGAGATGGTGCAGCTGCGGGTGGCCGCAAACTTGT +
Preference number: 6 (lower is better)
Translates to: CVPCIRLWTASG*RWCSCGWPQTC
Trigger: ACAAGTTTGCGGCCACCCGCAGCTGCACCATCTGCACCCTGATGCAGTCCAGAGGCGAATACAAGGGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp CCTTGTATTCGCCTCTGGACTGCATCAGGGTGCAGATaGTGCAGCTGCGGGTGGCCGCAAACTTGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: PCIRLWTASGCR*CSCGWPQTCSV
Trigger: CACTGAACAAGTTTGCGGCCACCCGCAGCTGCACCATCTGCACCCTGATGCAGTCCAGAGGCGAATACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 72 bp GTTTCTGGGCCCAGGGTAGTGGCTGTGCCGACTCTCTaGGGTTCCTCAGAGGCAGGCTTCTTGAGGGATAAG +
Preference number: 6 (lower is better)
Translates to: VSGPRVVAVPTL*GSSEAGFLRDK
Trigger: CTTATCCCTCAAGAAGCCTGCCTCTGAGGAACCCAAGAGAGTCGGCACAGCCACTACCCTGGGCCCAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS TCA 72 bp TGGGGACCCGGAGGCTCTTCTGCTATAGGTTTCCTGTaGCTGTGCTTCTTGCGGCTGGTTCTCTTCTCGTGC +
Preference number: 6 (lower is better)
Translates to: WGPGGSSAIGFL*LCFLRLVLFSC
Trigger: GCACGAGAAGAGAACCAGCCGCAAGAAGCACAGTCACAGGAAACCTATAGCAGAAGAGCCTCCGGGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp CAAAGCTGTCTGGGGTTTCAGCATGGTCTCCTTCAGTaGGCAAGGCCTGAGGAAGGTCAGAATCTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: QSCLGFQHGLLQ*ARPEEGQNLVP
Trigger: GGGGACCAGATTCTGACCTTCCTCAGGCCTTGCCCACTGAAGGAGACCATGCTGAAACCCCAGACAGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp GGGGAGTGGCGTTGGCTTTCGTGGAGGAACCGCTTCTaGCTGAGGGATTTGCACTTGCTCTTCTTCCAGTTG +
Preference number: 6 (lower is better)
Translates to: GEWRWLSWRNRF*LRDLHLLFFQL
Trigger: CAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACGCCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 72 bp ACTTCTTCTCCTGGGATTTCTTCCTGGGGAGTGGCGTaGGCTTTCGTGGAGGAACCGCTTCTGGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: TSSPGISSWGVA*AFVEEPLLAEG
Trigger: TCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACGCCACTCCCCAGGAAGAAATCCCAGGAGAAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS GCA 72 bp ATGAGTAAGATATTCAGCACCAGCCTCAGCCAGCTCTaGTGGGCCTCCCTCGGAAGCCTCTCTTTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: MSKIFSTSLSQL*WASLGSLSFLV
Trigger: CACCAAGAAAGAGAGGCTTCCGAGGGAGGCCCAGCAGAGCTGGCTGAGGCTGGTGCTGAATATCTTACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp AGTAAGATATTCAGCACCAGCCTCAGCCAGCTCTGCTaGGCCTCCCTCGGAAGCCTCTCTTTCTTGGTGTCT +
Preference number: 6 (lower is better)
Translates to: SKIFSTSLSQLC*ASLGSLSFLVS
Trigger: AGACACCAAGAAAGAGAGGCTTCCGAGGGAGGCCCAGCAGAGCTGGCTGAGGCTGGTGCTGAATATCTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp TTCCGGATCTGCCTCCCTAGATCCCTGTCCACCTCTTaGAGACTCGCCACGAGCTTTTGGATCATGAACTCC +
Preference number: 6 (lower is better)
Translates to: FRICLPRSLSTS*RLATSFWIMNS
Trigger: GGAGTTCATGATCCAAAAGCTCGTGGCGAGTCTCCAAGAGGTGGACAGGGATCTAGGGAGGCAGATCCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS TCA 72 bp AGTGGCGTTGGCTTTCGTGGAGGAACCGCTTCTGGCTaGGGGATTTGCACTTGCTCTTCTTCCAGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: SGVGFRGGTASG*GICTCSSSSWS
Trigger: AGACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 72 bp GTGCCGACTCTCTTGGGTTCCTCAGAGGCAGGCTTCTaGAGGGATAAGACTCTCTTCAGGCTGGACTTCTTC +
Preference number: 6 (lower is better)
Translates to: VPTLLGSSEAGF*RDKTLFRLDFF
Trigger: GAAGAAGTCCAGCCTGAAGAGAGTCTTATCCCTCAAGAAGCCTGCCTCTGAGGAACCCAAGAGAGTCGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS CAA 90 bp GAGTGGCGTTGGCTTTCGTGGAGGAACCGCTTCTGGCTGAGGGATTaGCACTTGCTCTTCTTCCAGTTGGTCTCCAGCTTTCTTGAGCAA +
Preference number: 6 (lower is better)
Translates to: EWRWLSWRNRFWLRD*HLLFFQLVSSFLEQ
Trigger: TTGCTCAAGAAAGCTGGAGACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACGCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS TCA 72 bp TGCCGACTCTCTTGGGTTCCTCAGAGGCAGGCTTCTTaGGGGATAAGACTCTCTTCAGGCTGGACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: CRLSWVPQRQAS*GIRLSSGWTSS
Trigger: AGAAGAAGTCCAGCCTGAAGAGAGTCTTATCCCTCAAGAAGCCTGCCTCTGAGGAACCCAAGAGAGTCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000062357.6
ENSMUST00000228025.2
CDS CAA 72 bp TCGTGGAGGAACCGCTTCTGGCTGAGGGATTTGCACTaGCTCTTCTTCCAGTTGGTCTCCAGCTTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: SWRNRFWLRDLH*LFFQLVSSFLE
Trigger: CTCAAGAAAGCTGGAGACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 72 bp TGGCTTTCGTGGAGGAACCGCTTCTGGCTGAGGGATTaGCACTTGCTCTTCTTCCAGTTGGTCTCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: WLSWRNRFWLRD*HLLFFQLVSSF
Trigger: AAAGCTGGAGACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 90 bp CGTTGGCTTTCGTGGAGGAACCGCTTCTGGCTGAGGGATTTGCACTaGCTCTTCTTCCAGTTGGTCTCCAGCTTTCTTGAGCAATTCCAC +
Preference number: 6 (lower is better)
Translates to: RWLSWRNRFWLRDLH*LFFQLVSSFLEQFH
Trigger: GTGGAATTGCTCAAGAAAGCTGGAGACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCTCCACGAAAGCCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 90 bp CTGCCAGAGCCTGGAGTCCCTGAAGCCTCTGTTTTCTTAGAATCCTaGGAGCTGTGTTTCCTGAGAGAAAAGGCTCTCCGGAGGTTAGAC +
Preference number: 6 (lower is better)
Translates to: LPEPGVPEASVFLES*ELCFLREKALRRLD
Trigger: GTCTAACCTCCGGAGAGCCTTTTCTCTCAGGAAACACAGCTCCAAGGATTCTAAGAAAACAGAGGCTTCAGGGACTCCAGGCTCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS GCA 72 bp AGTTGGTCTCCAGCTTTCTTGAGCAATTCCACAATCTaGCAGATGACATCATCCTGGTCAGGCTTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: SWSPAFLSNSTI*QMTSSWSGFLG
Trigger: CCCCAGGAAGCCTGACCAGGATGATGTCATCTGGCAGATTGTGGAATTGCTCAAGAAAGCTGGAGACCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 90 bp AGGAACCGCTTCTGGCTGAGGGATTTGCACTTGCTCTTCTTCCAGTaGGTCTCCAGCTTTCTTGAGCAATTCCACAATCTGCCAGATGAC +
Preference number: 6 (lower is better)
Translates to: RNRFWLRDLHLLFFQ*VSSFLEQFHNLPDD
Trigger: GTCATCTGGCAGATTGTGGAATTGCTCAAGAAAGCTGGAGACCAACTGGAAGAAGAGCAAGTGCAAATCCCTCAGCCAGAAGCGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CCA 72 bp TTGAGCAATTCCACAATCTGCCAGATGACATCATCCTaGTCAGGCTTCCTGGGGTCCTCTTCTAATGGAGGA +
Preference number: 6 (lower is better)
Translates to: LSNSTICQMTSS*SGFLGSSSNGG
Trigger: TCCTCCATTAGAAGAGGACCCCAGGAAGCCTGACCAGGATGATGTCATCTGGCAGATTGTGGAATTGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6
CDS CAA 72 bp TGCACTTGCTCTTCTTCCAGTTGGTCTCCAGCTTTCTaGAGCAATTCCACAATCTGCCAGATGACATCATCC +
Preference number: 6 (lower is better)
Translates to: CTCSSSSWSPAF*SNSTICQMTSS
Trigger: GGATGATGTCATCTGGCAGATTGTGGAATTGCTCAAGAAAGCTGGAGACCAACTGGAAGAAGAGCAAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062357.6