Pregenerated sensors for BNIP3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022051Ensembl transcript IDs: ENSMUST00000022634.9, ENSMUST00000111115.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCTGTTTCCTGTCTGTCACTCACACAGGCTGCCTCCTACAAACTaGAGGCGGCACAGGAGGCTTAGGAAAAGAGCGGCTCTGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LLFPVCHSHRLPPTN*RRHRRLRKRAALEL Trigger: CAGCTCCAGAGCCGCTCTTTTCCTAAGCCTCCTGTGCCGCCTTCAGTTTGTAGGAGGCAGCCTGTGTGAGTGACAGACAGGAAACAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 90 bp | CTGAATTTAGAGAGAAAACGATGTCTGCCTGTAAGAGCAAGCGCTTaGAGAGTGATTCTGCTCTGCCAGCTCACACATCAGCGCTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LNLERKRCLPVRASA*RVILLCQLTHQRCK Trigger: TTTGCAGCGCTGATGTGTGAGCTGGCAGAGCAGAATCACTCTTCAAGCGCTTGCTCTTACAGGCAGACATCGTTTTCTCTCTAAATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 90 bp | ACTCTGGCTCCATTAATACCAGGAGTTCCAACAGCTGCTTCACCGTaGGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: TLAPLIPGVPTAASP*EFSPFHSSLCCSLC Trigger: GCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACGGTGAAGCAGCTGTTGGAACTCCTGGTATTAATGGAGCCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 90 bp | ATTGCAGAACATCAGGAATTTGACAGAACTGAGAAGACACCTATGTaGGAAAATCACAGGGGCCTGGGAGAGACTAGGACACCTTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: IAEHQEFDRTEKTPM*ENHRGLGETRTPWE Trigger: TTCCCAAGGTGTCCTAGTCTCTCCCAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTCAGTTCTGTCAAATTCCTGATGTTCTGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR CCA 90 bp | CTGTTCCCACAACCCAAGTCTACTTTTCCAAGTCACACAAGTACTTaGAATAACCCTGAAGTTCTCCTTCAGAGTGTAAAGGCTCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LFPQPKSTFPSHTST*NNPEVLLQSVKAPE Trigger: CTCTGGAGCCTTTACACTCTGAAGGAGAACTTCAGGGTTATTCCAAGTACTTGTGTGACTTGGAAAAGTAGACTTGGGTTGTGGGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR CAA 90 bp | ACTGAATTTAGAGAGAAAACGATGTCTGCCTGTAAGAGCAAGCGCTaGAAGAGTGATTCTGCTCTGCCAGCTCACACATCAGCGCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: TEFREKTMSACKSKR*KSDSALPAHTSALQ Trigger: TTGCAGCGCTGATGTGTGAGCTGGCAGAGCAGAATCACTCTTCAAGCGCTTGCTCTTACAGGCAGACATCGTTTTCTCTCTAAATTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAAGAGCAGAGAAGGAGAAGGCAGAAGTAGCTCACAAATCATGTAGGTATGTCTCCCTCAGTAGGTaGTGGCAGAAGGTGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GLRAEKEKAEVAHKSCRYVSLSR*WQKVCS Trigger: TGAGCACACCTTCTGCCAGCACCTACTGAGGGAGAC...ATACCTACATGATTTGTGAGCTACTTCTGCCTTCTCCTTCTCTGCTCTTAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCGCATGTTGGAGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCGCACGCTTGCAAACCTaGTTGCCAAATTTATTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: IPHVGAANQHCTSSLMDSARLQT*LPNLFK Trigger: CTTGAATAAATTTGGCAACCAGGTTTGCAAGCGTGC...GCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCTCCAACATGCGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTGACAGAACTGAGAAGACACCTATGTGAGAAAATCACAGGGGCCTGGGAGACACAGCTTCTAGCATaGATGATGCAGGTGACTGGT | + |
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Preference number: 2 (lower is better) Translates to: NLTELRRHLCEKITGAWETQLLA*MMQVTG Trigger: ACCAGTCACCTGCATCATTCATGCTAGAAGCTGTGT...CTCCCAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTCAGTTCTGTCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCGAGCGGCTCTGGAGCTaGTTTAAAGTAATTTTTATT | + |
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Preference number: 2 (lower is better) Translates to: RESFLHFTLHCAVLCAAFERLWS*FKVIFI Trigger: AATAAAAATTACTTTAAACCAGCTCCAGAGCCGCTC...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTGACAGAACTGAGAAGACACCTATGTGAGAAAATCACAGGGGCCTGGGAGAGTCACACAAGTACTTaGAATAACCCTGAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NLTELRRHLCEKITGAWESHTST*NNPEVL Trigger: GAGAACTTCAGGGTTATTCCAAGTACTTGTGTGACT...CTCCCAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTCAGTTCTGTCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGCTTTCCTCTTGACTTATAAACATCTGAGCCAGTTTTCAATAAACTTAAAACAGCGCTGCAAACTCTaGTGGAGTTTAGCCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AAFLLTYKHLSQFSINLKQRCKL*WSLASA Trigger: TGCTGAGGCTAAACTCCAGCAGAGTTTGCAGCGCTG...TTTTAAGTTTATTGAAAACTGGCTCAGATGTTTATAAGTCAAGAGGAAAGCGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTGACAGAACTGAGAAGACACCTATGTGAGAAAATCACAGGGGCCTGGGAGGAGCGGCTCTGGAGCTaGTTTAAAGTAATTTTTATT | + |
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Preference number: 2 (lower is better) Translates to: NLTELRRHLCEKITGAWEERLWS*FKVIFI Trigger: AATAAAAATTACTTTAAACCAGCTCCAGAGCCGCTC...CTCCCAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTCAGTTCTGTCAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCTGTCTAACAATTTGGTCCTAAAGCTTCACATTTTAGAAACAGACAAAGAGAAGACACCTATGTaGGAAAATCACAGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LMLSNNLVLKLHILETDKEKTPM*ENHRGL Trigger: CAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTC...TTTGTCTGTTTCTAAAATGTGAAGCTTTAGGACCAAATTGTTAGACAGCATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR TCA 90 bp | GCCGCTTTCCTCTTGACTTATAAACATCTGAGCCAGTTTTCAATAAACTTAAAACAGACTCCTTCAGAGTaGTGCTGTGCTCTGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: AAFLLTYKHLSQFSINLKQTPSE*CCALNS Trigger: AGAGTTCAGAGCACAGCATCACTCTGAAGGAGTCTG...TTTTAAGTTTATTGAAAACTGGCTCAGATGTTTATAAGTCAAGAGGAAAGCGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTCCAGAGTGTAAGCAAAGCTTCCTAAAACAAGAAGCCTCTATTAACACCAGAAAGAGATGTAACTaGATGGCTAGAACACAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KAPECKQSFLKQEASINTRKRCN*MARTQL Trigger: AAGCTGTGTTCTAGCCATGCAGTTACATCTCTTTCT...GGTGTTAATAGAGGCTTCTTGTTTTAGGAAGCTTTGCTTACACTCTGGAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR CAA 90 bp | CTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCCTCTaGACTTATAAACATCTGAGCCAGTTTTCAATAAACTTAAAACGA | + |
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Preference number: 2 (lower is better) Translates to: LHFTLHCAVLCAAFL*TYKHLSQFSINLKR Trigger: TCGTTTTAAGTTTATTGAAAACTGGCTCAGATGTTTATAAGTCAAGAGGAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCATAGTTCAATGGCACTGTCGATGAAACTGCTACTGAATTTAGAGAGAAAAGGAAAAGAGCGGCTCTaGAGCTGGTTTAAAGTAATT | + |
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Preference number: 2 (lower is better) Translates to: SHSSMALSMKLLLNLERKGKERL*SWFKVI Trigger: AATTACTTTAAACCAGCTCCAGAGCCGCTCTTTTCC...TTTTCTCTCTAAATTCAGTAGCAGTTTCATCGACAGTGCCATTGAACTATGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCATAGTTCAATGGCACTGTCGATGAAACTGCTACTGAATTTAGAGAGAAAAGAGACTAGGACACCTTaGGAAGACTGTAGAATGAAT | + |
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Preference number: 2 (lower is better) Translates to: SHSSMALSMKLLLNLERKETRTP*EDCRMN Trigger: ATTCATTCTACAGTCTTCCCAAGGTGTCCTAGTCTC...TTTTCTCTCTAAATTCAGTAGCAGTTTCATCGACAGTGCCATTGAACTATGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCTTTCCAGAACTTTATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAGAGACAATGAACTGTTaGCAAGATTATAATCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ASFQNFINCSHNPSLLFQETMNC*QDYNLL Trigger: CAGCAGATTATAATCTTGTCAACAGTTCATTGTCTC...TTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATAAAGTTCTGGAAAGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCTGTCTAACAATTTGGTCCTAAAGCTTCACATTTTAGAAACAGACAAAGGGAAGACTGTAGAATaGATGGCATCTTTCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LMLSNNLVLKLHILETDKGKTVE*MASFQN Trigger: GTTCTGGAAAGATGCCATTCATTCTACAGTCTTCCC...TTTGTCTGTTTCTAAAATGTGAAGCTTTAGGACCAAATTGTTAGACAGCATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCATAGTTCAATGGCACTGTCGATGAAACTGCTACTGAATTTAGAGAGAAAAAGTCACACAAGTACTTaGAATAACCCTGAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SHSSMALSMKLLLNLERKSHTST*NNPEVL Trigger: GAGAACTTCAGGGTTATTCCAAGTACTTGTGTGACT...TTTTCTCTCTAAATTCAGTAGCAGTTTCATCGACAGTGCCATTGAACTATGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGCTGTCTAACAATTTGGTCCTAAAGCTTCACATTTTAGAAACAGACAAAGAGACAATGAACTGTTaGCAAGATTATAATCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LMLSNNLVLKLHILETDKETMNC*QDYNLL Trigger: CAGCAGATTATAATCTTGTCAACAGTTCATTGTCTC...TTTGTCTGTTTCTAAAATGTGAAGCTTTAGGACCAAATTGTTAGACAGCATCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 72 bp | CCTGTCTGTCACTCACACAGGCTGCCTCCTACAAACTaGAGGCGGCACAGGAGGCTTAGGAAAAGAGCGGCT | + |
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Preference number: 3 (lower is better) Translates to: PVCHSHRLPPTN*RRHRRLRKRAA Trigger: AGCCGCTCTTTTCCTAAGCCTCCTGTGCCGCCTTCAGTTTGTAGGAGGCAGCCTGTGTGAGTGACAGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR GCA 72 bp | AGAGTGATTCTGCTCTGCCAGCTCACACATCAGCGCTaGAAACTCTGCTGGAGTTTAGCCTCAGCAGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: RVILLCQLTHQR*KLCWSLASAAL Trigger: CAAGGCTGCTGAGGCTAAACTCCAGCAGAGTTTGCAGCGCTGATGTGTGAGCTGGCAGAGCAGAATCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 72 bp | GAGAGAAAACGATGTCTGCCTGTAAGAGCAAGCGCTTaGAGAGTGATTCTGCTCTGCCAGCTCACACATCAG | + |
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Preference number: 3 (lower is better) Translates to: ERKRCLPVRASA*RVILLCQLTHQ Trigger: CTGATGTGTGAGCTGGCAGAGCAGAATCACTCTTCAAGCGCTTGCTCTTACAGGCAGACATCGTTTTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR CCA 72 bp | GAAGGCGGCACAGGAGGCTTAGGAAAAGAGCGGCTCTaGAGCTGGTTTAAAGTAATTTTTATTGCCCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: EGGTGGLGKERL*SWFKVIFIAQD Trigger: ATCCTGGGCAATAAAAATTACTTTAAACCAGCTCCAGAGCCGCTCTTTTCCTAAGCCTCCTGTGCCGCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR CCA 72 bp | GAAAATCACAGGGGCCTGGGAGAGACTAGGACACCTTaGGAAGACTGTAGAATGAATGGCATCTTTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: ENHRGLGETRTP*EDCRMNGIFPE Trigger: TTCTGGAAAGATGCCATTCATTCTACAGTCTTCCCAAGGTGTCCTAGTCTCTCCCAGGCCCCTGTGATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 72 bp | CATCAGGAATTTGACAGAACTGAGAAGACACCTATGTaGGAAAATCACAGGGGCCTGGGAGAGACTAGGACA | + |
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Preference number: 3 (lower is better) Translates to: HQEFDRTEKTPM*ENHRGLGETRT Trigger: TGTCCTAGTCTCTCCCAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTCAGTTCTGTCAAATTCCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR GCA 72 bp | CACTCTGGCTCCATTAATACCAGGAGTTCCAACAGCTaGTTCACCGTGAGAGTTTTCTCCATTTCACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: HSGSINTRSSNS*FTVRVFSISLF Trigger: GAAGAGTGAAATGGAGAAAACTCTCACGGTGAAGCAGCTGTTGGAACTCCTGGTATTAATGGAGCCAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR GCA 72 bp | CTTTTCGTCTCCCTCAGTAGGTGCTGGCAGAAGGTGTaGTCAGTCGTTTTCCAATATAGATGCAGTGTATTC | + |
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Preference number: 3 (lower is better) Translates to: LFVSLSRCWQKV*SVVFQYRCSVF Trigger: GAATACACTGCATCTATATTGGAAAACGACTGAGCACACCTTCTGCCAGCACCTACTGAGGGAGACGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCGCATGTTGGAGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCAGTAAAATACTGGATTaGAGAGTTACTGGAATTGGG | + |
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Preference number: 3 (lower is better) Translates to: IPHVGAANQHCTSSLMDSSKILD*RVTGIG Trigger: CCCAATTCCAGTAACTCTCAAATCCAGTATTTTACT...GCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCTCCAACATGCGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCCAGAACATCAGGAATTaGACAGAACTGAGAAGACAC | + |
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Preference number: 3 (lower is better) Translates to: RESFLHFTLHCAVLCAAFQNIRN*TELRRH Trigger: GTGTCTTCTCAGTTCTGTCAAATTCCTGATGTTCTG...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCCGCTTGCAAACCTGGTaGCCAAATTTATTCAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: RESFLHFTLHCAVLCAAFRLQTW*PNLFKS Trigger: TGACTTGAATAAATTTGGCAACCAGGTTTGCAAGCG...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 72 bp | AGATGTAACTGCATGGCTAGAACACAGCTTCTAGCATaGATGATGCAGGTGACTGGTGGTACTAAGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: RCNCMARTQLLA*MMQVTGGTKRR Trigger: TCTCCTCTTAGTACCACCAGTCACCTGCATCATTCATGCTAGAAGCTGTGTTCTAGCCATGCAGTTACATCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 72 bp | CCATTAATACCAGGAGTTCCAACAGCTGCTTCACCGTaGGAGTTTTCTCCATTTCACTCTTCACTGTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: PLIPGVPTAASP*EFSPFHSSLCC Trigger: ACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACGGTGAAGCAGCTGTTGGAACTCCTGGTATTAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTGTTCTGTGATGTACAGAACATCAGGAATTaGACAGAACTGAGAAGACAC | + |
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Preference number: 3 (lower is better) Translates to: SCKSALYKLTDGQLFCDVQNIRN*TELRRH Trigger: GTGTCTTCTCAGTTCTGTCAAATTCCTGATGTTCTG...TACATCACAGAACAGCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCTGTAGGTTGCTAGCTTaGAAATTCACAATGGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: RESFLHFTLHCAVLCAAFCRLLA*KFTMVL Trigger: CAGAACCATTGTGAATTTCAAAGCTAGCAACCTACA...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR CCA 72 bp | CAACCCAAGTCTACTTTTCCAAGTCACACAAGTACTTaGAATAACCCTGAAGTTCTCCTTCAGAGTGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: QPKSTFPSHTST*NNPEVLLQSVK Trigger: CTTTACACTCTGAAGGAGAACTTCAGGGTTATTCCAAGTACTTGTGTGACTTGGAAAAGTAGACTTGGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CAA 90 bp | GCATCTTTCCAGAACTTTATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAAGTAAAATACTGGATTaGAGAGTTACTGGAATTGGG | + |
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Preference number: 3 (lower is better) Translates to: ASFQNFINCSHNPSLLFQSKILD*RVTGIG Trigger: CCCAATTCCAGTAACTCTCAAATCCAGTATTTTACT...TTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATAAAGTTCTGGAAAGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR-3UTR CAA 90 bp | CTGATGCTGTCTAACAATTTGGTCCTAAAGCTTCACATTTTAGAAACAGACAAAATGCCCCAACAGAGTTaGAGTAAAATACTGGATTTG | + |
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Preference number: 3 (lower is better) Translates to: LMLSNNLVLKLHILETDKMPQQS*SKILDL Trigger: CAAATCCAGTATTTTACTCAAACTCTGTTGGGGCAT...TTTGTCTGTTTCTAAAATGTGAAGCTTTAGGACCAAATTGTTAGACAGCATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 72 bp | ACAGACAAAAGAAAGTCTGCCATTCAAAGAATTTTCTaGGTATTGCAGAACATCAGGAATTTGACAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: TDKRKSAIQRIF*VLQNIRNLTEL Trigger: CAGTTCTGTCAAATTCCTGATGTTCTGCAATACTCAGAAAATTCTTTGAATGGCAGACTTTCTTTTGTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| 3UTR TCA 72 bp | AGTAATTATGTATTTATAAGACAGACTCCTTCAGAGTaGTGCTGTGCTCTGAACTCTAACAAAATCTACTTG | + |
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Preference number: 3 (lower is better) Translates to: SNYVFIRQTPSE*CCALNSNKIYL Trigger: CAAGTAGATTTTGTTAGAGTTCAGAGCACAGCATCACTCTGAAGGAGTCTGTCTTATAAATACATAATTACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR GCA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCGGCGGCGGCAGGGGCTaGTCCCCTTCCTCGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: RESFLHFTLHCAVLCAAFGGGRG*SPSSQL Trigger: CAACTGCGAGGAAGGGGAGCAGCCCCTGCCGCCGCC...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR TCA 90 bp | ATCCCGCATGTTGGAGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCCCCAAGGCCAGCACATaGGAAAGGAAGAGAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: IPHVGAANQHCTSSLMDSPKAST*ERKRDG Trigger: CCCATCTCTCTTCCTTTCTCATGTGCTGGCCTTGGG...GCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCTCCAACATGCGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CCA 90 bp | GGCCACACGAATTTCCAGGGGCTTTTCGTCTCCCTCAGTAGGTGCTGGCAGAAGTCCATGTCTCCATTGTaGATGGAAGACGAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHTNFQGLFVSLSRCWQKSMSPL*MEDEEG Trigger: TCCTTCCTCGTCTTCCATCCACAATGGAGACATGGA...CTTCTGCCAGCACCTACTGAGGGAGACGAAAAGCCCCTGGAAATTCGTGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | GGCCACACGAATTTCCAGGGGCTTTTCGTCTCCCTCAGTAGGTGCTGGCAGAAGTGTTTTCGGGTCTACTaGACCAGTCTGATACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHTNFQGLFVSLSRCWQKCFRVY*TSLIPS Trigger: ACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACA...CTTCTGCCAGCACCTACTGAGGGAGACGAAAAGCCCCTGGAAATTCGTGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | TCCCATAGTTCAATGGCACTGTCGATGAAACTGCTACTGAATTTAGAGAGAAAAGGCGGCGGCAGGGGCTaGTCCCCTTCCTCGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSSMALSMKLLLNLERKGGGRG*SPSSQL Trigger: CAACTGCGAGGAAGGGGAGCAGCCCCTGCCGCCGCC...TTTTCTCTCTAAATTCAGTAGCAGTTTCATCGACAGTGCCATTGAACTATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | ATCCCGCATGTTGGAGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCAACTGCCTCTTGAGCTaGTCTGTCCCGACTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPHVGAANQHCTSSLMDSNCLLS*SVPTHA Trigger: AGCATGAGTCGGGACAGAGCAGCTCAAGAGGCAGTT...GCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCTCCAACATGCGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCGCATGTTGGAGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTGCCCCCTTTCTTCATaGCTCCACTCTTCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: IPHVGAANQHCTSSLMDSCPLSS*LHSSSC Trigger: GCATGAGGAAGAGTGGAGCCATGAAGAAAGGGGGCA...GCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCTCCAACATGCGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCGAAGGGCTGTCACAGTaGGAACTGCCTCTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RESFLHFTLHCAVLCAAFEGLSQ*ELPLEL Trigger: CAGCTCAAGAGGCAGTTCGCACTGTGACAGCCCTTC...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCACTTCTTCTTCTGACTaGGAGCTGTGGTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RESFLHFTLHCAVLCAAFTSSSD*ELWSLL Trigger: CAGCAGGGACCACAGCTCTCAGTCAGAAGAAGAAGT...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTGTTCTGTGATGTACCCAAGGCCAGCACATaGGAAAGGAAGAGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCKSALYKLTDGQLFCDVPKAST*ERKRDG Trigger: CCCATCTCTCTTCCTTTCTCATGTGCTGGCCTTGGG...TACATCACAGAACAGCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | ATCCCGCATGTTGGAGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTCTCATTGCCATTGCTaGTGTTCATGGGTAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPHVGAANQHCTSSLMDSSHCHC*CSWVAP Trigger: TGGAGCTACCCATGAACAGCAGCAATGGCAATGAGA...GCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCTCCAACATGCGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCTCCCGACTCATGCTGTaGATCCAGGAGGATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RESFLHFTLHCAVLCAAFSRLML*IQEDLL Trigger: GAGAAGATCCTCCTGGATGCACAGCATGAGTCGGGA...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTGTTCTGTGATGTAACTTCTTCTTCTGACTaGGAGCTGTGGTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCKSALYKLTDGQLFCDVTSSSD*ELWSLL Trigger: CAGCAGGGACCACAGCTCTCAGTCAGAAGAAGAAGT...TACATCACAGAACAGCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | TATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAGTCACACAAGTACTTGGTTGTTGTTGTTGTTGTaGAAGGGCGGCGGCGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YQLFPQPKSTFPSHTSTWLLLLL*KGGGGS Trigger: CGAGCCGCCGCCGCCCTTGCACAACAACAACAACAA...CCAAGTACTTGTGTGACTTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTGTTCTGTGATGTATGTCACAGTGCGAACTaGCTCTTGAGCTGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCKSALYKLTDGQLFCDVCHSAN*LLSCSV Trigger: GACAGAGCAGCTCAAGAGGCAGTTCGCACTGTGACA...TACATCACAGAACAGCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGAAGGTGTGCTCAGTCGTTTTCCAATATAGATGCAGTGTATTCCAGATGTCACAGTGCGAACTaGCTCTTGAGCTGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGRRCAQSFSNIDAVYSRCHSAN*LLSCSV Trigger: GACAGAGCAGCTCAAGAGGCAGTTCGCACTGTGACA...TCTGGAATACACTGCATCTATATTGGAAAACGACTGAGCACACCTTCTGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCGCATGTTGGAGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTTAGGGTGTCTGAAATaGAACTCTTTGGGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IPHVGAANQHCTSSLMDSLGCLK*NSLGGM Trigger: CATCCCACCCAAAGAGTTCCATTTCAGACACCCTAA...GCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCTCCAACATGCGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| 3UTR CAA 72 bp | AGAGAGAAAACGATGTCTGCCTGTAAGAGCAAGCGCTaGAAGAGTGATTCTGCTCTGCCAGCTCACACATCA | + |
|
Preference number: 4 (lower is better) Translates to: REKTMSACKSKR*KSDSALPAHTS Trigger: TGATGTGTGAGCTGGCAGAGCAGAATCACTCTTCAAGCGCTTGCTCTTACAGGCAGACATCGTTTTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTCCAGAGTGTAAGCAAAGCTTCCTAAAACAAGAAGCCTCTATTAACACCCCCATCTTCTTGTGGTaGAGGGCTGTCACAGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KAPECKQSFLKQEASINTPIFLW*RAVTVR Trigger: TCGCACTGTGACAGCCCTTCACCACAAGAAGATGGG...GGTGTTAATAGAGGCTTCTTGTTTTAGGAAGCTTTGCTTACACTCTGGAGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | TATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAGTCACACAAGTACTTGGCCCATCTTCTTGTGGTaGAGGGCTGTCACAGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YQLFPQPKSTFPSHTSTWPIFLW*RAVTVR Trigger: TCGCACTGTGACAGCCCTTCACCACAAGAAGATGGG...CCAAGTACTTGTGTGACTTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCTACAACTTCTTCTTCTaGCTGAGAGCTGTGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RESFLHFTLHCAVLCAAFYNFFF*LRAVVP Trigger: AGGGACCACAGCTCTCAGTCAGAAGAAGAAGTTGTA...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | CGTGAGAGTTTTCTCCATTTCACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCTGTTTTCGGGTCTACTaGACCAGTCTGATACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RESFLHFTLHCAVLCAAFCFRVY*TSLIPS Trigger: ACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACA...GAAAGCGGCACAGAGAACAGCACAGTGAAGAGTGAAATGGAGAAAACTCTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGGTCTCAAATTCAAACTACAATACACCACTTCACAGGCCACACGAATTTTGTTGTTGTTGTTGTaGAAGGGCGGCGGCGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TIGLKFKLQYTTSQATRILLLLL*KGGGGS Trigger: CGAGCCGCCGCCGCCCTTGCACAACAACAACAACAA...AATTCGTGTGGCCTGTGAAGTGGTGTATTGTAGTTTGAATTTGAGACCTATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGAAGGTGTGCTCAGTCGTTTTCCAATATAGATGCAGTGTATTCCAGATGTCTCCATTGTGGATaGAAGACGAGGAAGGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: AGRRCAQSFSNIDAVYSRCLHCG*KTRKER Trigger: ACGTTCCTTCCTCGTCTTCCATCCACAATGGAGACA...TCTGGAATACACTGCATCTATATTGGAAAACGACTGAGCACACCTTCTGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | TATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAGTCACACAAGTACTTGGTGCCCCCTTTCTTCATaGCTCCACTCTTCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: YQLFPQPKSTFPSHTSTWCPLSS*LHSSSC Trigger: GCATGAGGAAGAGTGGAGCCATGAAGAAAGGGGGCA...CCAAGTACTTGTGTGACTTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | GCATCTTTCCAGAACTTTATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAAACTGCCTCTTGAGCTaGTCTGTCCCGACTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASFQNFINCSHNPSLLFQNCLLS*SVPTHA Trigger: AGCATGAGTCGGGACAGAGCAGCTCAAGAGGCAGTT...TTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATAAAGTTCTGGAAAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | ACAATAGGTCTCAAATTCAAACTACAATACACCACTTCACAGGCCACACGAATTGAAGGGCTGTCACAGTaGGAACTGCCTCTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TIGLKFKLQYTTSQATRIEGLSQ*ELPLEL Trigger: CAGCTCAAGAGGCAGTTCGCACTGTGACAGCCCTTC...AATTCGTGTGGCCTGTGAAGTGGTGTATTGTAGTTTGAATTTGAGACCTATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGAAGGTGTGCTCAGTCGTTTTCCAATATAGATGCAGTGTATTCCAGATGGTCCCTGCTGGTATaGATCTCAACATCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: AGRRCAQSFSNIDAVYSRWSLLV*ISTSNM Trigger: CATGTTTGATGTTGAGATGCATACCAGCAGGGACCA...TCTGGAATACACTGCATCTATATTGGAAAACGACTGAGCACACCTTCTGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGACAGAACTGAGAAGACACCTATGTGAGAAAATCACAGGGGCCTGGGAGATGGAACTCTTTGGGTaGGATGTTTTCGGGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: NLTELRRHLCEKITGAWEMELFG*DVFGST Trigger: AGTAGACCCGAAAACATCCCACCCAAAGAGTTCCAT...CTCCCAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTCAGTTCTGTCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | TATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAGTCACACAAGTACTTGGTCTACTGGACCAGTCTaGTACCCAGTCTGCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQLFPQPKSTFPSHTSTWSTGPV*YPVCTF Trigger: AAAAGTGCAGACTGGGTATCAGACTGGTCCAGTAGA...CCAAGTACTTGTGTGACTTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | GCATCTTTCCAGAACTTTATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAATCTACTGGACCAGTCTaGTACCCAGTCTGCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASFQNFINCSHNPSLLFQSTGPV*YPVCTF Trigger: AAAAGTGCAGACTGGGTATCAGACTGGTCCAGTAGA...TTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATAAAGTTCTGGAAAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCCAGAGTGTAAGCAAAGCTTCCTAAAACAAGAAGCCTCTATTAACACCTGGTCCCTGCTGGTATaGATCTCAACATCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: KAPECKQSFLKQEASINTWSLLV*ISTSNM Trigger: CATGTTTGATGTTGAGATGCATACCAGCAGGGACCA...GGTGTTAATAGAGGCTTCTTGTTTTAGGAAGCTTTGCTTACACTCTGGAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | GCATCTTTCCAGAACTTTATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAAGCTGTGGTCCCTGCTaGTATGCATCTCAACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASFQNFINCSHNPSLLFQSCGPC*YASQHQ Trigger: TTGATGTTGAGATGCATACCAGCAGGGACCACAGCT...TTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATAAAGTTCTGGAAAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTCCAGAGTGTAAGCAAAGCTTCCTAAAACAAGAAGCCTCTATTAACACCGGAAGAGAGATGGGATaGAAACTTTTAGGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAPECKQSFLKQEASINTGREMG*KLLGTL Trigger: CAGAGTTCCTAAAAGTTTTCATCCCATCTCTCTTCC...GGTGTTAATAGAGGCTTCTTGTTTTAGGAAGCTTTGCTTACACTCTGGAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTAAGAGCAGAGAAGGAGAAGGCAGAAGTAGCTCACAAATCATGTAGGTATGGAAGAGAGATGGGATaGAAACTTTTAGGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRAEKEKAEVAHKSCRYGREMG*KLLGTL Trigger: CAGAGTTCCTAAAAGTTTTCATCCCATCTCTCTTCC...ATACCTACATGATTTGTGAGCTACTTCTGCCTTCTCCTTCTCTGCTCTTAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTTTCCTCTTGACTTATAAACATCTGAGCCAGTTTTCAATAAACTTAAAATCCCGACTCATGCTGTaGATCCAGGAGGATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAFLLTYKHLSQFSINLKSRLML*IQEDLL Trigger: GAGAAGATCCTCCTGGATGCACAGCATGAGTCGGGA...TTTTAAGTTTATTGAAAACTGGCTCAGATGTTTATAAGTCAAGAGGAAAGCGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | ACAATAGGTCTCAAATTCAAACTACAATACACCACTTCACAGGCCACACGAATTTGTCTCCATTGTGGATaGAAGACGAGGAAGGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: TIGLKFKLQYTTSQATRICLHCG*KTRKER Trigger: ACGTTCCTTCCTCGTCTTCCATCCACAATGGAGACA...AATTCGTGTGGCCTGTGAAGTGGTGTATTGTAGTTTGAATTTGAGACCTATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| 3UTR CAA 72 bp | ACTCTTCACTGTGCTGTTCTCTGTGCCGCTTTCCTCTaGACTTATAAACATCTGAGCCAGTTTTCAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLHCAVLCAAFL*TYKHLSQFSIN Trigger: GTTTATTGAAAACTGGCTCAGATGTTTATAAGTCAAGAGGAAAGCGGCACAGAGAACAGCACAGTGAAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | CAACAGAGTTTGAGTAAAATACTGGATTTGAGAGTTACTGGAATTGGGTATGTAGTTTTCCAATATAGATaGCGAGCCCCAAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQSLSKILDLRVTGIGYVVFQYR*RAPRPA Trigger: TGCTGGCCTTGGGGCTCGGCATCTATATTGGAAAAC...TACATACCCAATTCCAGTAACTCTCAAATCCAGTATTTTACTCAAACTCTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022634.9 |
||
| CDS-3UTR CCA 90 bp | ACAATAGGTCTCAAATTCAAACTACAATACACCACTTCACAGGCCACACGAATTATGGAACTCTTTGGGTaGGATGTTTTCGGGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: TIGLKFKLQYTTSQATRIMELFG*DVFGST Trigger: AGTAGACCCGAAAACATCCCACCCAAAGAGTTCCAT...AATTCGTGTGGCCTGTGAAGTGGTGTATTGTAGTTTGAATTTGAGACCTATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | AGGGATCATGCTTACAATAGGTCTCAAATTCAAACTACAATACACCACTTCACACATTCTCATTGCCATTaGTGCTGTTCATGGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDHAYNRSQIQTTIHHFTHSHCH*CCSWVA Trigger: AGCTACCCATGAACAGCAGCAATGGCAATGAGAATG...TGTGAAGTGGTGTATTGTAGTTTGAATTTGAGACCTATTGTAAGCATGATCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGAGTTTGAGTAAAATACTGGATTTGAGAGTTACTGGAATTGGGTATGTATCCATGTCTCCATTGTaGATGGAAGACGAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQSLSKILDLRVTGIGYVSMSPL*MEDEEG Trigger: TCCTTCCTCGTCTTCCATCCACAATGGAGACATGGA...TACATACCCAATTCCAGTAACTCTCAAATCCAGTATTTTACTCAAACTCTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR GCA 90 bp | CTGATGCTGTCTAACAATTTGGTCCTAAAGCTTCACATTTTAGAAACAGACAAACATTCTCATTGCCATTaGTGCTGTTCATGGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLSNNLVLKLHILETDKHSHCH*CCSWVA Trigger: AGCTACCCATGAACAGCAGCAATGGCAATGAGAATG...TTTGTCTGTTTCTAAAATGTGAAGCTTTAGGACCAAATTGTTAGACAGCATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS-3UTR CCA 90 bp | GCCGCTTTCCTCTTGACTTATAAACATCTGAGCCAGTTTTCAATAAACTTAAAATTAGGGTGTCTGAAATaGAACTCTTTGGGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AAFLLTYKHLSQFSINLKLGCLK*NSLGGM Trigger: CATCCCACCCAAAGAGTTCCATTTCAGACACCCTAA...TTTTAAGTTTATTGAAAACTGGCTCAGATGTTTATAAGTCAAGAGGAAAGCGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS GCA 90 bp | AGCTCCACCCAGGAACTGTTGAGGCCAGCGGGCGGCGGCAGGGGCTaGTCCCCTTCCTCGCAGTTGTTGTTGTTGTTGTGCAAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTQELLRPAGGGRG*SPSSQLLLLLCKGG Trigger: GCCGCCCTTGCACAACAACAACAACAACTGCGAGGAAGGGGAGCAGCCCCTGCCGCCGCCCGCTGGCCTCAACAGTTCCTGGGTGGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
||
| CDS TCA 90 bp | CATTGCCATTGCTGCTGTTCATGGGTAGCTCCACCCAGGAACTGTTaGGGCCAGCGGGCGGCGGCAGGGGCTGCTCCCCTTCCTCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HCHCCCSWVAPPRNC*GQRAAAGAAPLPRS Trigger: ACTGCGAGGAAGGGGAGCAGCCCCTGCCGCCGCCCGCTGGCCTCAACAGTTCCTGGGTGGAGCTACCCATGAACAGCAGCAATGGCAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS TCA 90 bp | ACTGAGAGCTGTGGTCCCTGCTGGTATGCATCTCAACATCAAACATaGTCTGCCCATCTTCTTGTGGTGAAGGGCTGTCACAGTGCGAAC | + |
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Preference number: 5 (lower is better) Translates to: TESCGPCWYASQHQT*SAHLLVVKGCHSAN Trigger: GTTCGCACTGTGACAGCCCTTCACCACAAGAAGATGGGCAGATCATGTTTGATGTTGAGATGCATACCAGCAGGGACCACAGCTCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | AGCTGCAAATCAGCACTGTACAAGCTCACTGATGGACAGCTGTTCTGTGATGTATCCTCGCAGTTGTTGTaGTTGTTGTGCAAGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SCKSALYKLTDGQLFCDVSSQLL*LLCKGG Trigger: GCCGCCCTTGCACAACAACAACAACAACTGCGAGGA...TACATCACAGAACAGCTGTCCATCAGTGAGCTTGTACAGTGCTGATTTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | GCTGGCAGAAGGTGTGCTCAGTCGTTTTCCAATATAGATGCAGTGTATTCCAGACCTTCCTCGCAGTTGTaGTTGTTGTTGTGCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AGRRCAQSFSNIDAVYSRPSSQL*LLLCKG Trigger: GCCCTTGCACAACAACAACAACAACTGCGAGGAAGG...TCTGGAATACACTGCATCTATATTGGAAAACGACTGAGCACACCTTCTGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | TATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAGTCACACAAGTACTTGGTCCTCGCAGTTGTTGTaGTTGTTGTGCAAGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: YQLFPQPKSTFPSHTSTWSSQLL*LLCKGG Trigger: GCCGCCCTTGCACAACAACAACAACAACTGCGAGGA...CCAAGTACTTGTGTGACTTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | GCATCTTTCCAGAACTTTATCAACTGTTCCCACAACCCAAGTCTACTTTTCCAAAGTGCGAACTGCCTCTaGAGCTGCTCTGTCCCGACT | + |
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Preference number: 5 (lower is better) Translates to: ASFQNFINCSHNPSLLFQSANCL*SCSVPT Trigger: AGTCGGGACAGAGCAGCTCAAGAGGCAGTTCGCACT...TTGGAAAAGTAGACTTGGGTTGTGGGAACAGTTGATAAAGTTCTGGAAAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | AATTTGACAGAACTGAGAAGACACCTATGTGAGAAAATCACAGGGGCCTGGGAGCCATTTCCATTCTCATaGCCATTGCTGCTGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: NLTELRRHLCEKITGAWEPFPFS*PLLLFM Trigger: CATGAACAGCAGCAATGGCAATGAGAATGGAAATGG...CTCCCAGGCCCCTGTGATTTTCTCACATAGGTGTCTTCTCAGTTCTGTCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | GGTTTAAGAGCAGAGAAGGAGAAGGCAGAAGTAGCTCACAAATCATGTAGGTATTTCTCCATGTCTCCATaGTGGATGGAAGACGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GLRAEKEKAEVAHKSCRYFSMSP*WMEDEE Trigger: TTCCTCGTCTTCCATCCACAATGGAGACATGGAGAA...ATACCTACATGATTTGTGAGCTACTTCTGCCTTCTCCTTCTCTGCTCTTAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | CAACAGAGTTTGAGTAAAATACTGGATTTGAGAGTTACTGGAATTGGGTATGTAAGTGCGAACTGCCTCTaGAGCTGCTCTGTCCCGACT | + |
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Preference number: 5 (lower is better) Translates to: QQSLSKILDLRVTGIGYVSANCL*SCSVPT Trigger: AGTCGGGACAGAGCAGCTCAAGAGGCAGTTCGCACT...TACATACCCAATTCCAGTAACTCTCAAATCCAGTATTTTACTCAAACTCTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | AGGGATCATGCTTACAATAGGTCTCAAATTCAAACTACAATACACCACTTCACACCTTCCTCGCAGTTGTaGTTGTTGTTGTGCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RDHAYNRSQIQTTIHHFTPSSQL*LLLCKG Trigger: GCCCTTGCACAACAACAACAACAACTGCGAGGAAGG...TGTGAAGTGGTGTATTGTAGTTTGAATTTGAGACCTATTGTAAGCATGATCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS-3UTR CAA 90 bp | CTGATGCTGTCTAACAATTTGGTCCTAAAGCTTCACATTTTAGAAACAGACAAATTCTCCATGTCTCCATaGTGGATGGAAGACGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LMLSNNLVLKLHILETDKFSMSP*WMEDEE Trigger: TTCCTCGTCTTCCATCCACAATGGAGACATGGAGAA...TTTGTCTGTTTCTAAAATGTGAAGCTTTAGGACCAAATTGTTAGACAGCATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS CAA 72 bp | GCGGGCGGCGGCAGGGGCTGCTCCCCTTCCTCGCAGTaGTTGTTGTTGTTGTGCAAGGGCGGCGGCGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: AGGGRGCSPSSQ*LLLLCKGGGGS Trigger: CGAGCCGCCGCCGCCCTTGCACAACAACAACAACAACTGCGAGGAAGGGGAGCAGCCCCTGCCGCCGCCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS TCA 72 bp | TGCTGCTGTTCATGGGTAGCTCCACCCAGGAACTGTTaGGGCCAGCGGGCGGCGGCAGGGGCTGCTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: CCCSWVAPPRNC*GQRAAAGAAPL Trigger: AAGGGGAGCAGCCCCTGCCGCCGCCCGCTGGCCTCAACAGTTCCTGGGTGGAGCTACCCATGAACAGCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS CAA 72 bp | TTGCTGCTGTTCATGGGTAGCTCCACCCAGGAACTGTaGAGGCCAGCGGGCGGCGGCAGGGGCTGCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLFMGSSTQEL*RPAGGGRGCSP Trigger: AGGGGAGCAGCCCCTGCCGCCGCCCGCTGGCCTCAACAGTTCCTGGGTGGAGCTACCCATGAACAGCAGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS CAA 90 bp | TCATTGCCATTGCTGCTGTTCATGGGTAGCTCCACCCAGGAACTGTaGAGGCCAGCGGGCGGCGGCAGGGGCTGCTCCCCTTCCTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLPLLLFMGSSTQEL*RPAGGGRGCSPSSQ Trigger: CTGCGAGGAAGGGGAGCAGCCCCTGCCGCCGCCCGCTGGCCTCAACAGTTCCTGGGTGGAGCTACCCATGAACAGCAGCAATGGCAATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS GCA 72 bp | CAGGAACTGTTGAGGCCAGCGGGCGGCGGCAGGGGCTaGTCCCCTTCCTCGCAGTTGTTGTTGTTGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QELLRPAGGGRG*SPSSQLLLLLC Trigger: GCACAACAACAACAACAACTGCGAGGAAGGGGAGCAGCCCCTGCCGCCGCCCGCTGGCCTCAACAGTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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| CDS CCA 72 bp | AATGGAACTCTTTGGGTGGGATGTTTTCGGGTCTACTaGACCAGTCTGATACCCAGTCTGCACTTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NGTLWVGCFRVY*TSLIPSLHFSS Trigger: TGAAGAAAAGTGCAGACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACATCCCACCCAAAGAGTTCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022634.9 ENSMUST00000111115.8 |
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