Pregenerated sensors for BNIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024191Ensembl transcript IDs: ENSMUST00000015725.16, ENSMUST00000126505.3, ENSMUST00000134344.8, ENSMUST00000135824.8, ENSMUST00000137989.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTaGGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: PRGRGEVQFGSPASP*DPGPDPGAGVHRPK Trigger: CTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR GCA 90 bp | TGCCTCCATCCTGAAGGTTCCCGGCTCCTCTATTCCACACACCCTTaGCAAGCCCTCTGGCAGGAGGCTGGGCTGCTGTGTTTCCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: CLHPEGSRLLYSTHP*QALWQEAGLLCFPL Trigger: CAGAGGGAAACACAGCAGCCCAGCCTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAGAGGAGCCGGGAACCTTCAGGATGGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR TCA 90 bp | CCTCTCTTCCCTCCACAGGCCCAGCGCTCAGGCCTCTGGACATGGTaGGAGGAGGTACACCAAGTCCCGGCGTTAATGTGCTCTCTATGG | + |
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Preference number: 1 (lower is better) Translates to: PLFPPQAQRSGLWTW*EEVHQVPALMCSLW Trigger: CCATAGAGAGCACATTAACGCCGGGACTTGGTGTACCTCCTCTCACCATGTCCAGAGGCCTGAGCGCTGGGCCTGTGGAGGGAAGAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| 3UTR CCA 90 bp | GAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTaGCAGCTCTCGCTTACAAAAATGGAAAGAGGCGCTTTTTCACAA | + |
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Preference number: 1 (lower is better) Translates to: EIPARILEQACTGQS*QLSLTKMERGAFSQ Trigger: TTGTGAAAAAGCGCCTCTTTCCATTTTTGTAAGCGAGAGCTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR GCA 90 bp | GTCCGTGAGGAGCTGACTAGAGTCTGCATAGCCTCCTCGCTCTGTTaGACCTGCTGTGACATCATCCTGCTGATCCCCATGAGACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: VREELTRVCIASSLC*TCCDIILLIPMRLS Trigger: AGAGAGTCTCATGGGGATCAGCAGGATGATGTCACAGCAGGTGCAACAGAGCGAGGAGGCTATGCAGACTCTAGTCAGCTCCTCACGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| 3UTR CCA 90 bp | ATCCTGCTGATCCCCATGAGACTCTCTGTGATGGAGCTGGAGGTCTaGGCCAAACTCTCTTTGGTGGTTTTCCTTTGCCGTAAGGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: ILLIPMRLSVMELEV*AKLSLVVFLCRKES Trigger: AGACTCCTTACGGCAAAGGAAAACCACCAAAGAGAGTTTGGCCCAGACCTCCAGCTCCATCACAGAGAGTCTCATGGGGATCAGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR CCA 90 bp | GTCAGTTCTCGGCGGTTGTACTTTGTGATGAGCTTCCGGCCCAACTaGATGGTTCCCGACATGGACTTAAACTCTTCGTTTGCATCCAGG | + |
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Preference number: 1 (lower is better) Translates to: VSSRRLYFVMSFRPN*MVPDMDLNSSFASR Trigger: CCTGGATGCAAACGAAGAGTTTAAGTCCATGTCGGGAACCATCCAGTTGGGCCGGAAGCTCATCACAAAGTACAACCGCCGAGAACTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| 3UTR TCA 90 bp | GAGGTCTGGTTGCTGAGCATCTGCTTTTTGTGGTTCTCCACTTCCTaGAGTAGAAGCTGCTTCTCTGACTCCTTGTCTTGCTCCCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: EVWLLSICFLWFSTS*SRSCFSDSLSCSLA Trigger: AGCAAGGGAGCAAGACAAGGAGTCAGAGAAGCAGCTTCTACTTCAGGAAGTGGAGAACCACAAAAAGCAGATGCTCAGCAACCAGACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR TCA 90 bp | CAGGTTGTCGATGGCAAGCTTGCAGGTAAGATTGGCTTTTCGCCATaGGGTCTGGTTGCTGAGCATCTGCTTTTTGTGGTTCTCCACTTC | + |
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Preference number: 1 (lower is better) Translates to: QVVDGKLAGKIGFSP*GLVAEHLLFVVLHF Trigger: GAAGTGGAGAACCACAAAAAGCAGATGCTCAGCAACCAGACCTCATGGCGAAAAGCCAATCTTACCTGCAAGCTTGCCATCGACAACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR CCA 90 bp | TTCTCTGACTCCTTGTCTTGCTCCCTTGCTGACTGTTCGAGCTCCTaGATCCTCTGTTTTAACTGTTGGAACTTTTCTTTCACCTTAGTA | + |
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Preference number: 1 (lower is better) Translates to: FSDSLSCSLADCSSS*ILCFNCWNFSFTLV Trigger: TACTAAGGTGAAAGAAAAGTTCCAACAGTTAAAACAGAGGATCCAGGAGCTCGAACAGTCAGCAAGGGAGCAAGACAAGGAGTCAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR CCA 90 bp | TCCCTTGCTGACTGTTCGAGCTCCTGGATCCTCTGTTTTAACTGTTaGAACTTTTCTTTCACCTTAGTATTCAGTTCAGTAAGCTCACTT | + |
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Preference number: 1 (lower is better) Translates to: SLADCSSSWILCFNC*NFSFTLVFSSVSSL Trigger: AAGTGAGCTTACTGAACTGAATACTAAGGTGAAAGAAAAGTTCCAACAGTTAAAACAGAGGATCCAGGAGCTCGAACAGTCAGCAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCGGCTAGTCCTTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCTCCCGGCCCGGATCCTaGAGCAGGCGTGCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: ARLVLEIPARILEQACTGSRPGS*SRRAQA Trigger: GGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGA...GCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTTCCCGGCCCGGATCCTaGAGCAGGCGTGCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LGSPSPRGRGEVQFGSPASRPGS*SRRAQA Trigger: GGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGA...AGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGAGCCCGGCTAGTCCTTaGGATCCCGGCCCGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: LEIPARILEQACTGQSWQSPASP*DPGPDP Trigger: AGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGCT...CTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTCCTTGCCAAGCCCTCTaGCAGGAGGCTGGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GSRSPWKPGELECLHPEGPCQAL*QEAGLL Trigger: CAGCAGCCCAGCCTCCTGCCAGAGGGCTTGGCAAGG...ACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCCTCTATGGCAGCCGCAGTCCTTaGAAGCCGGGGGAGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: WKPGELECLHPEGSRLLYGSRSP*KPGELE Trigger: CTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCC...ATAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCAGCGCTCAGGCCTCTGGACATGGTGAGAGGAGGTACACCAAGTCCCGGGGAGTGCCTCCATCCTaGAGGTTCCCGGCTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: RPSAQASGHGERRYTKSRGVPPS*RFPAPL Trigger: TAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCC...CCGGGACTTGGTGTACCTCCTCTCACCATGTCCAGAGGCCTGAGCGCTGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCCTCTATTCCACCGGGGGAGCTGGAGTaGCTCCATCCTGAAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SRGSWSASILKVPGSSIPPGELE*LHPEGS Trigger: GGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGG...TGGAATAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGCTGCTGTGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGCCTCTGGCAGGAGGCTaGGCTGCTGTGTTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGLLCFPLLGSPSPRGRGPLAGG*AAVFPS Trigger: AGAGGGAAACACAGCAGCCCAGCCTCCTGCCAGAGG...CCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACACAGCAGCCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCTATTCCACACACCCTTaGCAAGCCCTCTGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: AAVLGSRGSWSASILKVPYSTHP*QALWQE Trigger: CTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATA...GGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGCTCTCGCTTATATTCCACACACCCTTaGCAAGCCCTCTGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RPGSWSRRAQAKAGSSRLYSTHP*QALWQE Trigger: CTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATA...TAAGCGAGAGCTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCACCGGGGGAGCTGGAGTaGCTCCATCCTGAAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: AVFPSVRFTEPPRERGSPPGELE*LHPEGS Trigger: GGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGG...TGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACACAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTCCGTCAGTTCTCGGCGGTTGTACTTTGTGATGAGCTTCCGGCCCAACTGTCCCGGCCCGGATCCTaGAGCAGGCGTGCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LVRQFSAVVLCDELPAQLSRPGS*SRRAQA Trigger: GGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGA...CAGTTGGGCCGGAAGCTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCCTCTATTCCACACCCTCTGGCAGGAGGCTaGGCTGCTGTGTTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RGSWSASILKVPGSSIPHPLAGG*AAVFPS Trigger: AGAGGGAAACACAGCAGCCCAGCCTCCTGCCAGAGG...GTGTGGAATAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTAGCCCGGCTAGTCCTTaGGATCCCGGCCCGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: CFPLLGSPSPRGRGEVQFSPASP*DPGPDP Trigger: AGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGCT...AAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCGCTCTGTTGCACCTaGTGTGACATCATCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AVLGSRGSWSASILKVPGSLCCT*CDIILL Trigger: CAGCAGGATGATGTCACAGCAGGTGCAACAGAGCGA...GCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTCCCGGCTCCTCTATTCCACACACCCTTGCCAAGCCCTCTGGCAGGAGGGGCCTCTGGACATGGTaGGAGGAGGTACACCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: KVPGSSIPHTLAKPSGRRGLWTW*EEVHQV Trigger: GACTTGGTGTACCTCCTCTCACCATGTCCAGAGGCC...CCTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAGAGGAGCCGGGAACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCTCTATGGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCTGCACAGGCCAAAGCTaGCAGCTCTCGCTTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: VLSMAAAVLGSRGSWSASCTGQS*QLSLTK Trigger: TTTTGTAAGCGAGAGCTGCCAGCTTTGGCCTGTGCA...GGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCCATAGAGAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR CAA 90 bp | GCCAGGGCCAGGAAGATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTaGTACTTTGTGATGAGCTTCCGGCCCAACTGGATGGTTCCCGAC | + |
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Preference number: 2 (lower is better) Translates to: ARARKMSSLSVSSRR*YFVMSFRPNWMVPD Trigger: GTCGGGAACCATCCAGTTGGGCCGGAAGCTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCATCTTCCTGGCCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTTGTACTTTGTGATGAGCTTCCGGAGCCCGGCTAGTCCTTaGGATCCCGGCCCGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: MSSLSVSSRRLYFVMSFRSPASP*DPGPDP Trigger: AGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGCT...CCGGAAGCTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTGGTTCTCCACTTCCTaGAGTAGAAGCTGCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GSRSPWKPGELECLHPEGWFSTS*SRSCFS Trigger: AGAGAAGCAGCTTCTACTTCAGGAAGTGGAGAACCA...ACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR-3UTR CCA 90 bp | GCGCTTTTTCACAATATAAAGGACTGTAGCGAGGAAGAGGGCCAGGGCCAGGAAGGCAGCCGCAGTCCTTaGAAGCCGGGGGAGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ALFHNIKDCSEEEGQGQEGSRSP*KPGELE Trigger: CTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCC...TTCCTGGCCCTGGCCCTCTTCCTCGCTACAGTCCTTTATATTGTGAAAAAGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGCTCTCGCTTACAAAAAGTCTTGCTCCCTTGCTaGCTGTTCGAGCTCCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSWSRRAQAKAGSSRLQKVLLPC*LFELLD Trigger: ATCCAGGAGCTCGAACAGTCAGCAAGGGAGCAAGAC...TTTTTGTAAGCGAGAGCTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR-3UTR TCA 90 bp | AGGTTCCCGGCTCCTCTATTCCACACACCCTTGCCAAGCCCTCTGGCAGGAGGCATGAGGTCTGGTTGCTaGGCATCTGCTTTTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RFPAPLFHTPLPSPLAGGMRSGC*ASAFCG Trigger: ACCACAAAAAGCAGATGCTCAGCAACCAGACCTCAT...GCCTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAGAGGAGCCGGGAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCCCGGCTCCTCTATTCCACACACCCTTGCCAAGCCCTCTGGCAGGAGGCTTTCGCCATGAGGTCTaGTTGCTGAGCATCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: RFPAPLFHTPLPSPLAGGFRHEV*LLSICF Trigger: AAAGCAGATGCTCAGCAACCAGACCTCATGGCGAAA...GCCTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAGAGGAGCCGGGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTTGTACTTTGTGATGAGCTTCCGGTATTCCACACACCCTTaGCAAGCCCTCTGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: MSSLSVSSRRLYFVMSFRYSTHP*QALWQE Trigger: CTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATA...CCGGAAGCTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR CAA 90 bp | CCTCCTTGCAGAAGTTCTGCCTTCTCCAGGTTGTCGATGGCAAGCTaGCAGGTAAGATTGGCTTTTCGCCATGAGGTCTGGTTGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PPCRSSAFSRLSMAS*QVRLAFRHEVWLLS Trigger: GCTCAGCAACCAGACCTCATGGCGAAAAGCCAATCTTACCTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGAACTTCTGCAAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR CAA 90 bp | TGCCGTAAGGAGTCTCCTCCTTGCAGAAGTTCTGCCTTCTCCAGGTaGTCGATGGCAAGCTTGCAGGTAAGATTGGCTTTTCGCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: CRKESPPCRSSAFSR*SMASLQVRLAFRHE Trigger: CTCATGGCGAAAAGCCAATCTTACCTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGAACTTCTGCAAGGAGGAGACTCCTTACGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCAGCTCTCGCTTACAAAAATGGAAAGAGGCGCTTTTTCACAATATAAAGCCTTGCCAAGCCCTCTaGCAGGAGGCTGGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AGSSRLQKWKEALFHNIKPCQAL*QEAGLL Trigger: CAGCAGCCCAGCCTCCTGCCAGAGGGCTTGGCAAGG...CTTTATATTGTGAAAAAGCGCCTCTTTCCATTTTTGTAAGCGAGAGCTGCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTTCCCGACATGGACTTAAACTCTTCGTTTGCATCCAGGAGAGTCCGTGAGTCGCTCTGTTGCACCTaGTGTGACATCATCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: MVPDMDLNSSFASRRVRESLCCT*CDIILL Trigger: CAGCAGGATGATGTCACAGCAGGTGCAACAGAGCGA...CTCACGGACTCTCCTGGATGCAAACGAAGAGTTTAAGTCCATGTCGGGAACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| 3UTR CAA 90 bp | CTTCCTGAAGTAGAAGCTGCTTCTCTGACTCCTTGTCTTGCTCCCTaGCTGACTGTTCGAGCTCCTGGATCCTCTGTTTTAACTGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LPEVEAASLTPCLAP*LTVRAPGSSVLTVG Trigger: TCCAACAGTTAAAACAGAGGATCCAGGAGCTCGAACAGTCAGCAAGGGAGCAAGACAAGGAGTCAGAGAAGCAGCTTCTACTTCAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR-3UTR CAA 90 bp | GTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCTGGCAGCCGCAGTCCTaGGAAGCCGGGGGAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: VHRAPEGEGKSSLAARLVWQPQS*EAGGAG Trigger: TCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCCA...GACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| 3UTR-3UTR CAA 90 bp | TATGGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAATGGCAGCCGCAGTCCTaGGAAGCCGGGGGAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: YGSRSPWKPGELECLHPEWQPQS*EAGGAG Trigger: TCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCCA...TTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCCATA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR TCA 72 bp | AGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTaGGATCCCGGCCCGGATCCTGGAGCAGGCGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGEVQFGSPASP*DPGPDPGAGVH Trigger: GTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR GCA 72 bp | GGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTaGCTCCATCCTGAAGGTTCCCGGCTCCTCTATTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSRSPWKPGELE*LHPEGSRLLYS Trigger: GGAATAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCCTATTCCACACACCCTaGCCAAGCCCTCTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVLGSRGSWSASILKVPGLFHTP*PSPLAG Trigger: TCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAG...GCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCCTCAGGAAGATGAGCAGCTaGTCCGTCAGTTCTCGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: PWKPGELECLHPEGSRLLRKMSS*SVSSRR Trigger: CCGCCGAGAACTGACGGACAAGCTGCTCATCTTCCT...GAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCGGCTCCTCTATTCCACACACCCTTGCCAAGCCCTCTGGCAGGAGGCTGGGCTATTCCACACACCCTaGCCAAGCCCTCTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SRLLYSTHPCQALWQEAGLFHTP*PSPLAG Trigger: TCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAG...CCCAGCCTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAGAGGAGCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGCCTTGTCTTGCTCCCTaGCTGACTGTTCGAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LEIPARILEQACTGQSWQPCLAP*LTVRAP Trigger: AGGAGCTCGAACAGTCAGCAAGGGAGCAAGACAAGG...CTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
||
| 3UTR TCA 72 bp | TCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTaGAGGTTCCCGGCTCCTCTATTCCACACACCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLEAGGAGVPPS*RFPAPLFHTPL Trigger: CAAGGGTGTGTGGAATAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR GCA 72 bp | GTCCTTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTaGACAGGCCAAAGCTGGCAGCTCTCGCTTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLEIPARILEQA*TGQSWQLSLTK Trigger: TTTTGTAAGCGAGAGCTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR CCA 72 bp | CGGCTCCTCTATTCCACACACCCTTGCCAAGCCCTCTaGCAGGAGGCTGGGCTGCTGTGTTTCCCTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RLLYSTHPCQAL*QEAGLLCFPLL Trigger: TAACAGAGGGAAACACAGCAGCCCAGCCTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAGAGGAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR GCA 72 bp | GAGCTGACTAGAGTCTGCATAGCCTCCTCGCTCTGTTaGACCTGCTGTGACATCATCCTGCTGATCCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: ELTRVCIASSLC*TCCDIILLIPM Trigger: CATGGGGATCAGCAGGATGATGTCACAGCAGGTGCAACAGAGCGAGGAGGCTATGCAGACTCTAGTCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 |
||
| 3UTR CCA 72 bp | CGGCGGTTGTACTTTGTGATGAGCTTCCGGCCCAACTaGATGGTTCCCGACATGGACTTAAACTCTTCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RRLYFVMSFRPN*MVPDMDLNSSF Trigger: AAACGAAGAGTTTAAGTCCATGTCGGGAACCATCCAGTTGGGCCGGAAGCTCATCACAAAGTACAACCGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTACAAAAATGGAAAGAGGCGCTTTTTCACAATATAAAGGACTGTAGCGAGCTATTCCACACACCCTaGCCAAGCCCTCTGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLQKWKEALFHNIKDCSELFHTP*PSPLAG Trigger: TCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAG...CTCGCTACAGTCCTTTATATTGTGAAAAAGCGCCTCTTTCCATTTTTGTAAGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTACAAAAATGGAAAGAGGCGCTTTTTCACAATATAAAGGACTGTAGCGAGTCTGCCTTCTCCAGGTaGTCGATGGCAAGCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLQKWKEALFHNIKDCSESAFSR*SMASLQ Trigger: CTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGA...CTCGCTACAGTCCTTTATATTGTGAAAAAGCGCCTCTTTCCATTTTTGTAAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
||
| 3UTR CCA 72 bp | TCCTTGTCTTGCTCCCTTGCTGACTGTTCGAGCTCCTaGATCCTCTGTTTTAACTGTTGGAACTTTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSCSLADCSSS*ILCFNCWNFSF Trigger: GAAAGAAAAGTTCCAACAGTTAAAACAGAGGATCCAGGAGCTCGAACAGTCAGCAAGGGAGCAAGACAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
||
| 3UTR CAA 72 bp | GTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTaGGCAGCCCGGCTAGTCCTTGAGATCCCGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VHRAPEGEGKSS*AARLVLEIPAR Trigger: CCGGGCCGGGATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTTACAGATCCGGACGTaGACATCCTGGGGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVLGSRGSWSASILKVPGLQIRT*TSWGAA Trigger: GGCGGCTCCCCAGGATGTCCACGTCCGGATCTGTAA...GCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGCTCTCGCTGTTGCACCTGCTGTaGCATCATCCTGCTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPARILEQACTGQSWQLSLLHLL*HHPADP Trigger: GGGATCAGCAGGATGATGTCACAGCAGGTGCAACAG...CGAGAGCTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000137989.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCTGCTGTGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGCCAGGGCCAGGAAGATaGGCAGCTTGTCCGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLLCFPLLGSPSPRGRGPGPGR*AACPSV Trigger: AACTGACGGACAAGCTGCTCATCTTCCTGGCCCTGG...CCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACACAGCAGCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015725.16 |
||
| CDS-3UTR TCA 90 bp | TTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTGTCTTGCTCCCTTGCTaGCTGTTCGAGCTCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSPSPRGRGEVQFGSPAVLLPC*LFELLD Trigger: ATCCAGGAGCTCGAACAGTCAGCAAGGGAGCAAGAC...AGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR TCA 90 bp | GCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGCTCTCGCTTACAGTCTTGCTCCCTTGCTaGCTGTTCGAGCTCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARILEQACTGQSWQLSLTVLLPC*LFELLD Trigger: ATCCAGGAGCTCGAACAGTCAGCAAGGGAGCAAGAC...TGTAAGCGAGAGCTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134344.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCAGCGCTCAGGCCTCTGGACATGGTGAGAGGAGGTACACCAAGTCCCGGCTGTTGCACCTGCTGTaGCATCATCCTGCTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPSAQASGHGERRYTKSRLLHLL*HHPADP Trigger: GGGATCAGCAGGATGATGTCACAGCAGGTGCAACAG...CCGGGACTTGGTGTACCTCCTCTCACCATGTCCAGAGGCCTGAGCGCTGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015725.16 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGATCCCGGCCCGGTCGCTCTGTTGCACCTaGTGTGACATCATCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGKSSLAARLVLEIPARSLCCT*CDIILL Trigger: CAGCAGGATGATGTCACAGCAGGTGCAACAGAGCGA...CCGGGCCGGGATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000137989.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTCTCTATGGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCTCGCTCTGTTGCACCTaGTGTGACATCATCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSMAAAVLGSRGSWSASSLCCT*CDIILL Trigger: CAGCAGGATGATGTCACAGCAGGTGCAACAGAGCGA...GGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCCATAGAGAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000137989.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGATCGCCTCCTCGCTCTGTTaGACCTGCTGTGACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: APEGEGKSSLAARLVLEIASSLC*TCCDII Trigger: GATGATGTCACAGCAGGTGCAACAGAGCGAGGAGGC...GATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000137989.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCTTACAGATCCGGACGTaGACATCCTGGGGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLCFPLLGSPSPRGRGEVLQIRT*TSWGAA Trigger: GGCGGCTCCCCAGGATGTCCACGTCCGGATCTGTAA...GACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACACAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 |
||
| CDS-3UTR GCA 90 bp | CTTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGAAGGAGTCTCCTCCTTaGAGAAGTTCTGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEIPARILEQACTGQSWQKESPP*RSSAFS Trigger: GGAGAAGGCAGAACTTCTGCAAGGAGGAGACTCCTT...CTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGAGCTTCCGGCCCAACTaGATGGTTCCCGACATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCFPLLGSPSPRGRGEVQSFRPN*MVPDMD Trigger: GTCCATGTCGGGAACCATCCAGTTGGGCCGGAAGCT...CTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015725.16 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCCTTGCAGAAGTTCTaGCTTCTCCAGGTTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLGSRGSWSASILKVPGSLQKF*LLQVVD Trigger: ATCGACAACCTGGAGAAGGCAGAACTTCTGCAAGGA...GCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGCTCCTTGCAGAAGTTCTaGCTTCTCCAGGTTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSRPGSWSRRAQAKAGSSLQKF*LLQVVD Trigger: ATCGACAACCTGGAGAAGGCAGAACTTCTGCAAGGA...GCTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| CDS-3UTR CCA 90 bp | GCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCTTTCGCCATGAGGTCTaGTTGCTGAGCATCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAVLGSRGSWSASILKVPFRHEV*LLSICF Trigger: AAAGCAGATGCTCAGCAACCAGACCTCATGGCGAAA...GGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCCAAAGCTGGCAGTTTCGCCATGAGGTCTaGTTGCTGAGCATCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEIPARILEQACTGQSWQFRHEV*LLSICF Trigger: AAAGCAGATGCTCAGCAACCAGACCTCATGGCGAAA...CTGCCAGCTTTGGCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGATCCCGGCCCGGATCTGGTTCTCCACTTCCTaGAGTAGAAGCTGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGKSSLAARLVLEIPARIWFSTS*SRSCFS Trigger: AGAGAAGCAGCTTCTACTTCAGGAAGTGGAGAACCA...GATCCGGGCCGGGATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCATGAGGTCTGGTTGCTaGGCATCTGCTTTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSPWKPGELECLHPEGSMRSGC*ASAFCG Trigger: ACCACAAAAAGCAGATGCTCAGCAACCAGACCTCAT...GGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCTGGTTGCTGAGCATCTaGTTTTTGTGGTTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AAVLGSRGSWSASILKVPWLLSI*FLWFST Trigger: AGTGGAGAACCACAAAAAGCAGATGCTCAGCAACCA...GGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGATCCCGGCCCGGATCCTGTCCTTGCAGAAGTTCTaGCTTCTCCAGGTTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKSSLAARLVLEIPARILSLQKF*LLQVVD Trigger: ATCGACAACCTGGAGAAGGCAGAACTTCTGCAAGGA...CAGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| CDS-3UTR TCA 90 bp | CGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGCCTCTAGGTCGAATTTaGCAATCTCTTGGTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAPEGEGKSSLAARLVLEPLGRI*QSLGYR Trigger: TCTGTAACCAAGAGATTGTCAAATTCGACCTAGAGG...CTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTCCCGGCTCCTCTATTCCACACACCCTTGCCAAGCCCTCTGGCAGGAGGCTGGTTCTCCACTTCCTaGAGTAGAAGCTGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFPAPLFHTPLPSPLAGGWFSTS*SRSCFS Trigger: AGAGAAGCAGCTTCTACTTCAGGAAGTGGAGAACCA...GCCTCCTGCCAGAGGGCTTGGCAAGGGTGTGTGGAATAGAGGAGCCGGGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCCTCTATTCCATGAGGTCTGGTTGCTaGGCATCTGCTTTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPGELECLHPEGSRLLYSMRSGC*ASAFCG Trigger: ACCACAAAAAGCAGATGCTCAGCAACCAGACCTCAT...GGAATAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR GCA 90 bp | AGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCTGGTTGCTGAGCATCTaGTTTTTGTGGTTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRSPWKPGELECLHPEGSWLLSI*FLWFST Trigger: AGTGGAGAACCACAAAAAGCAGATGCTCAGCAACCA...GGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR CCA 90 bp | CACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTAATTTGACAATCTCTTaGTTACAGATCCGGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRAPEGEGKSSLAARLVLNLTIS*LQIRTW Trigger: CCACGTCCGGATCTGTAACCAAGAGATTGTCAAATT...AAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 |
||
| CDS-3UTR CCA 90 bp | TCTATGGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGCAATCTCGAATATCCTaGATAAGCGCCTTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMAAAVLGSRGSWSASILQSRIS*ISAFTS Trigger: AGAGGTGAAGGCGCTTATCCAGGATATTCGAGATTG...CAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCCATAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCGGCTCCTCTATTCCACACACGGGCCAAACTCTCTTTaGTGGTTTTCCTTTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GELECLHPEGSRLLYSTHGPNSL*WFSFAV Trigger: TACGGCAAAGGAAAACCACCAAAGAGAGTTTGGCCC...GTGTGTGGAATAGAGGAGCCGGGAACCTTCAGGATGGAGGCACTCCAGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000137989.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGGGCCAGGAAGATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTTGTACTTTAAGGAGTCTCCTCCTTaGAGAAGTTCTGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARARKMSSLSVSSRRLYFKESPP*RSSAFS Trigger: GGAGAAGGCAGAACTTCTGCAAGGAGGAGACTCCTT...AAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCATCTTCCTGGCCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134344.8 ENSMUST00000137989.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTAAGGAGTCTCCTCCTTaGAGAAGTTCTGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFPLLGSPSPRGRGEVQFKESPP*RSSAFS Trigger: GGAGAAGGCAGAACTTCTGCAAGGAGGAGACTCCTT...AAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTTGTACTTTGTGATGAGCTTCCGGGCCTCCTCGCTCTGTTaGACCTGCTGTGACATCATC | + |
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Preference number: 4 (lower is better) Translates to: MSSLSVSSRRLYFVMSFRASSLC*TCCDII Trigger: GATGATGTCACAGCAGGTGCAACAGAGCGAGGAGGC...CCGGAAGCTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137989.2 |
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| 3UTR CAA 72 bp | AGGAAGATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTaGTACTTTGTGATGAGCTTCCGGCCCAACTGGATG | + |
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Preference number: 4 (lower is better) Translates to: RKMSSLSVSSRR*YFVMSFRPNWM Trigger: CATCCAGTTGGGCCGGAAGCTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCATCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| CDS-3UTR CCA 90 bp | CTGTGTTTCCCTCTGTTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGAATTTGACAATCTCTTaGTTACAGATCCGGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: LCFPLLGSPSPRGRGEVQNLTIS*LQIRTW Trigger: CCACGTCCGGATCTGTAACCAAGAGATTGTCAAATT...CTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAACAGAGGGAAACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 |
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| 3UTR CAA 72 bp | AGAAGTTCTGCCTTCTCCAGGTTGTCGATGGCAAGCTaGCAGGTAAGATTGGCTTTTCGCCATGAGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSSAFSRLSMAS*QVRLAFRHEVW Trigger: CCAGACCTCATGGCGAAAAGCCAATCTTACCTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGAACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| 3UTR CAA 72 bp | TTGCAGGTAAGATTGGCTTTTCGCCATGAGGTCTGGTaGCTGAGCATCTGCTTTTTGTGGTTCTCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: LQVRLAFRHEVW*LSICFLWFSTS Trigger: GGAAGTGGAGAACCACAAAAAGCAGATGCTCAGCAACCAGACCTCATGGCGAAAAGCCAATCTTACCTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| CDS-3UTR CCA 90 bp | GGCAGCTCTCGCTTACAAAAATGGAAAGAGGCGCTTTTTCACAATATAAAGGACGGGCCAAACTCTCTTTaGTGGTTTTCCTTTGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: GSSRLQKWKEALFHNIKDGPNSL*WFSFAV Trigger: TACGGCAAAGGAAAACCACCAAAGAGAGTTTGGCCC...GTCCTTTATATTGTGAAAAAGCGCCTCTTTCCATTTTTGTAAGCGAGAGCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000137989.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGACTGTTCGAGCTCCTGGATCCTCTGTTTTAACTGTTGGAACTTTTCTTCCTCTAGGTCGAATTTaGCAATCTCTTGGTTACAGA | + |
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Preference number: 4 (lower is better) Translates to: LLTVRAPGSSVLTVGTFLPLGRI*QSLGYR Trigger: TCTGTAACCAAGAGATTGTCAAATTCGACCTAGAGG...AAGAAAAGTTCCAACAGTTAAAACAGAGGATCCAGGAGCTCGAACAGTCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| CDS-3UTR TCA 90 bp | CGCTTACAAAAATGGAAAGAGGCGCTTTTTCACAATATAAAGGACTGTAGCGAGCCTCTAGGTCGAATTTaGCAATCTCTTGGTTACAGA | + |
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Preference number: 4 (lower is better) Translates to: RLQKWKEALFHNIKDCSEPLGRI*QSLGYR Trigger: TCTGTAACCAAGAGATTGTCAAATTCGACCTAGAGG...CTCGCTACAGTCCTTTATATTGTGAAAAAGCGCCTCTTTCCATTTTTGTAAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| CDS-3UTR CAA 90 bp | GCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCCCTTGTCTTGCTCCCTaGCTGACTGTTCGAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AAVLGSRGSWSASILKVPPCLAP*LTVRAP Trigger: AGGAGCTCGAACAGTCAGCAAGGGAGCAAGACAAGG...GGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
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| CDS-3UTR CAA 90 bp | GGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCTGCCTTCTCCAGGTaGTCGATGGCAAGCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GSRSPWKPGELECLHPEGSAFSR*SMASLQ Trigger: CTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGA...ACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGATCCCGGCCCGGATCAGGAAGATGAGCAGCTaGTCCGTCAGTTCTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: EGKSSLAARLVLEIPARIRKMSS*SVSSRR Trigger: CCGCCGAGAACTGACGGACAAGCTGCTCATCTTCCT...GATCCGGGCCGGGATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015725.16 |
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| CDS-3UTR CAA 90 bp | TGCTCTCTATGGCAGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCTGCCTTCTCCAGGTaGTCGATGGCAAGCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CSLWQPQSLEAGGAGVPPSAFSR*SMASLQ Trigger: CTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGA...TGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCTGCCATAGAGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| CDS-3UTR CAA 90 bp | GCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGATCTCTGCCTTCTCCAGGTaGTCGATGGCAAGCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: APEGEGKSSLAARLVLEISAFSR*SMASLQ Trigger: CTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGA...GATCTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 ENSMUST00000137989.2 |
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| CDS-3UTR CAA 90 bp | TTAGGTTCACCGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTCGCCATGAGGTCTGGTaGCTGAGCATCTGCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: LGSPSPRGRGEVQFGSPARHEVW*LSICFL Trigger: CAAAAAGCAGATGCTCAGCAACCAGACCTCATGGCG...AGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCGGTGAACCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000134344.8 |
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| CDS-3UTR CAA 90 bp | GCCCGGCTAGTCCTTGAGATCCCGGCCCGGATCCTGGAGCAGGCGTGCACAGGCACCTCTAGGTCGAATTaGACAATCTCTTGGTTACAG | + |
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Preference number: 5 (lower is better) Translates to: ARLVLEIPARILEQACTGTSRSN*TISWLQ Trigger: CTGTAACCAAGAGATTGTCAAATTCGACCTAGAGGT...GCCTGTGCACGCCTGCTCCAGGATCCGGGCCGGGATCTCAAGGACTAGCCGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| CDS-3UTR CAA 90 bp | AGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCGTCAGTTCTCGGCGGTaGTACTTTGTGATGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SRSPWKPGELECLHPEGSVSSRR*YFVMSF Trigger: GAAGCTCATCACAAAGTACAACCGCCGAGAACTGAC...GGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015725.16 |
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| CDS-3UTR CAA 90 bp | CGAGCCCCCGAGGGAGAGGGGAAGTCCAGTTTGGCAGCCCGGCTAGTCCTTGAGGAATTTGACAATCTCTaGGTTACAGATCCGGACGTG | + |
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Preference number: 5 (lower is better) Translates to: RAPEGEGKSSLAARLVLEEFDNL*VTDPDV Trigger: CACGTCCGGATCTGTAACCAAGAGATTGTCAAATTC...CTCAAGGACTAGCCGGGCTGCCAAACTGGACTTCCCCTCTCCCTCGGGGGCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 |
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| CDS-3UTR CAA 90 bp | GCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCCACCTCTAGGTCGAATTaGACAATCTCTTGGTTACAG | + |
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Preference number: 5 (lower is better) Translates to: AAVLGSRGSWSASILKVPTSRSN*TISWLQ Trigger: CTGTAACCAAGAGATTGTCAAATTCGACCTAGAGGT...GGGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| CDS-3UTR CAA 90 bp | AGCCGCAGTCCTTGGAAGCCGGGGGAGCTGGAGTGCCTCCATCCTGAAGGTTCCACCTCTAGGTCGAATTaGACAATCTCTTGGTTACAG | + |
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Preference number: 5 (lower is better) Translates to: SRSPWKPGELECLHPEGSTSRSN*TISWLQ Trigger: CTGTAACCAAGAGATTGTCAAATTCGACCTAGAGGT...GGAACCTTCAGGATGGAGGCACTCCAGCTCCCCCGGCTTCCAAGGACTGCGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000134344.8 |
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| CDS-3UTR CAA 90 bp | CAGGAAGATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTTGTACTTTGTGATGAGCCTTGTCTTGCTCCCTaGCTGACTGTTCGAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: QEDEQLVRQFSAVVLCDEPCLAP*LTVRAP Trigger: AGGAGCTCGAACAGTCAGCAAGGGAGCAAGACAAGG...CTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCATCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134344.8 |
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| CDS-3UTR CAA 90 bp | GAAGATGAGCAGCTTGTCCGTCAGTTCTCGGCGGTTGTACTTTGTGATGAGCTTCGCCATGAGGTCTGGTaGCTGAGCATCTGCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: EDEQLVRQFSAVVLCDELRHEVW*LSICFL Trigger: CAAAAAGCAGATGCTCAGCAACCAGACCTCATGGCG...AAGCTCATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTGCTCATCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134344.8 |
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| CDS TCA 90 bp | TTGGTGGTTTTCCTGAGCATCTGCTTTTTGTGGTTCTCCACTTCCTaGAGTAGAAGCTGCTTCTCTGACTCCTTGTCTTGCTCCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LVVFLSICFLWFSTS*SRSCFSDSLSCSLA Trigger: AGCAAGGGAGCAAGACAAGGAGTCAGAGAAGCAGCTTCTACTTCAGGAAGTGGAGAACCACAAAAAGCAGATGCTCAGGAAAACCACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135824.8 |
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| CDS-3UTR CAA 90 bp | GGCAGCTCTCGCTTACAAAAATGGAAAGAGGCGCTTTTTCACAATATAAAGGACGAATTTGACAATCTCTaGGTTACAGATCCGGACGTG | + |
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Preference number: 5 (lower is better) Translates to: GSSRLQKWKEALFHNIKDEFDNL*VTDPDV Trigger: CACGTCCGGATCTGTAACCAAGAGATTGTCAAATTC...GTCCTTTATATTGTGAAAAAGCGCCTCTTTCCATTTTTGTAAGCGAGAGCTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| CDS CCA 72 bp | AGCGCCTTCACCTCTAGGTCGAATTTGACAATCTCTTaGTTACAGATCCGGACGTGGACATCCTGGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SAFTSRSNLTIS*LQIRTWTSWGA Trigger: GGCTCCCCAGGATGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATTCGACCTAGAGGTGAAGGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015725.16 ENSMUST00000126505.3 ENSMUST00000135824.8 |
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| CDS CAA 90 bp | CCTCCTTGCAGAAGTTCTGCCTTCTCCAGGTTGTCGATGGCAAGCTaGCAGGTAAGATTGGCTTTTCGCCATGAGGTCTGGTTGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PPCRSSAFSRLSMAS*QVRLAFRHEVWLLD Trigger: ATCCAGCAACCAGACCTCATGGCGAAAAGCCAATCTTACCTGCAAGCTTGCCATCGACAACCTGGAGAAGGCAGAACTTCTGCAAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137989.2 |
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| CDS GCA 72 bp | AGCACGTTTGAGACCAGACTGGGATGTATGAGACTTTaGCGTAAGGAGTCTCCTCCTTGCAGAAGTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: STFETRLGCMRL*RKESPPCRSSA Trigger: GGCAGAACTTCTGCAAGGAGGAGACTCCTTACGGCAAAGTCTCATACATCCCAGTCTGGTCTCAAACGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134344.8 |
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| CDS CAA 90 bp | CAATCTCGAATATCCTGGATAAGCGCCTTCACCTCTAGGTCGAATTaGACAATCTCTTGGTTACAGATCCGGACGTGGACATCCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: QSRISWISAFTSRSN*TISWLQIRTWTSWG Trigger: TCCCCAGGATGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATTCGACCTAGAGGTGAAGGCGCTTATCCAGGATATTCGAGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000135824.8 |
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| CDS CAA 72 bp | GAACACTGGATAAGCGCCTTCACCTCTAGGTCGAATTaGACAATCTCTTGGTTACAGATCCGGACGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: EHWISAFTSRSN*TISWLQIRTWT Trigger: TGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATTCGACCTAGAGGTGAAGGCGCTTATCCAGTGTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126505.3 |
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| CDS CAA 72 bp | ATATCCTGGATAAGCGCCTTCACCTCTAGGTCGAATTaGACAATCTCTTGGTTACAGATCCGGACGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: ISWISAFTSRSN*TISWLQIRTWT Trigger: TGTCCACGTCCGGATCTGTAACCAAGAGATTGTCAAATTCGACCTAGAGGTGAAGGCGCTTATCCAGGATAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015725.16 ENSMUST00000135824.8 |
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