RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BNC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025105

Ensembl transcript IDs: ENSMUST00000026096.10

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGTGGAGGCCACCCAGCTTCCTTGGAGAACTCCCTGCCGTTCCATaGGAGACTGGAGGGAGCAATGACCAACTCCCAATGCAGGGACGG +
Preference number: 1 (lower is better)
Translates to: MWRPPSFLGELPAVP*ETGGSNDQLPMQGR
Trigger: CCGTCCCTGCATTGGGAGTTGGTCATTGCTCCCTCCAGTCTCTCATGGAACGGCAGGGAGTTCTCCAAGGAAGCTGGGTGGCCTCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR TCA 90 bp CTTACACTCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTaGAGACAGGCTGGTGCTCTGGAGCATAAGTTGTCTCTTGTTCTA +
Preference number: 1 (lower is better)
Translates to: LTLTPVGQQTLQFTT*RQAGALEHKLSLVL
Trigger: TAGAACAAGAGACAACTTATGCTCCAGAGCACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGAGTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR GCA 90 bp GAGAGACTGGAGGGAGCAATGACCAACTCCCAATGCAGGGACGGATaGTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGGGTTTAAAT +
Preference number: 1 (lower is better)
Translates to: ERLEGAMTNSQCRDG*SLNFNSLDSSLGLN
Trigger: ATTTAAACCCAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTGGTCATTGCTCCCTCCAGTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR CCA 90 bp ATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGGGTTTAAATaGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATG +
Preference number: 1 (lower is better)
Translates to: MLSELQFPRLKSGFK*GGGLENDIFGTGVM
Trigger: CATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACCCAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTGCAGGCCTCATGTGTaGCTAGCTCCTGACCCCTAC +
Preference number: 2 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVCRPHV*LAPDPY
Trigger: GTAGGGGTCAGGAGCTAGGCACACATGAGGCCTGCA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR TCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGTGTGTGCCTAGCTCCTaGCCCCTACTCCCTCCAGTT +
Preference number: 2 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLCVPSS*PLLPPV
Trigger: AACTGGAGGGAGTAGGGGTCAGGAGCTAGGCACACA...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR TCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGAGCGCACTTCTTTCCTaGTACCCTTCATACTGCAGG +
Preference number: 2 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVSALLS*YPSYCR
Trigger: CCTGCAGTATGAAGGGTATCAGGAAAGAAGTGCGCT...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR CCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCACATGTAAACAAATCTaGGAAATCTGGCTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCTCKQI*EIWLSV
Trigger: CACAGAAAGCCAGATTTCCCAGATTTGTTTACATGT...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR TCA 72 bp CCACCCAGCTTCCTTGGAGAACTCCCTGCCGTTCCATaGGAGACTGGAGGGAGCAATGACCAACTCCCAATG +
Preference number: 3 (lower is better)
Translates to: PPSFLGELPAVP*ETGGSNDQLPM
Trigger: CATTGGGAGTTGGTCATTGCTCCCTCCAGTCTCTCATGGAACGGCAGGGAGTTCTCCAAGGAAGCTGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR GCA 72 bp GGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTaGGCTTACCCTGCTGTAGAAGGCTGTAGAGTCAAA +
Preference number: 3 (lower is better)
Translates to: GLPQCQLLTAES*AYPAVEGCRVK
Trigger: TTTGACTCTACAGCCTTCTACAGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR CAA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGTTGAAAATGACATCTTaGGGACTGGTGTCATGCCCA +
Preference number: 3 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVLKMTS*GLVSCP
Trigger: TGGGCATGACACCAGTCCCAAAGATGTCATTTTCAA...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR GCA 72 bp GAGGGAGCAATGACCAACTCCCAATGCAGGGACGGATaGTCTCTGAACTTCAATTCCCTAGACTCAAGTCTG +
Preference number: 3 (lower is better)
Translates to: EGAMTNSQCRDG*SLNFNSLDSSL
Trigger: CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTGGTCATTGCTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR GCA 72 bp CATGAGAGACTGGAGGGAGCAATGACCAACTCCCAATaGAGGGACGGATGCTCTCTGAACTTCAATTCCCTA +
Preference number: 3 (lower is better)
Translates to: HERLEGAMTNSQ*RDGCSLNFNSL
Trigger: TAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTGGTCATTGCTCCCTCCAGTCTCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR CAA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGAATGGGGAGGAGGACTaGAAAATGACATCTTTGGGA +
Preference number: 3 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLNGEED*KMTSLG
Trigger: TCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATT...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCAGAGTCAAAGCACTTTaGCTCGGCTTTTGGGAAATG +
Preference number: 3 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCRVKAL*LGFWEM
Trigger: CATTTCCCAAAAGCCGAGCAAAAGTGCTTTGACTCT...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCTTTCTGTGTTTTCCTaGTGTCGGTGGAAAACTTTG +
Preference number: 3 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCLSVFS*CRWKTL
Trigger: CAAAGTTTTCCACCGACACAAGGAAAACACAGAAAG...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR CCA 72 bp GAAGGCTGTAGAGTCAAAGCACTTTTGCTCGGCTTTTaGGAAATGGTATTAAACAGTCCAGCTACCTCATTC +
Preference number: 3 (lower is better)
Translates to: EGCRVKALLLGF*EMVLNSPATSF
Trigger: GAATGAGGTAGCTGGACTGTTTAATACCATTTCCCAAAAGCCGAGCAAAAGTGCTTTGACTCTACAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR CCA 72 bp GAACTTCAATTCCCTAGACTCAAGTCTGGGTTTAAATaGGGAGGAGGACTTGAAAATGACATCTTTGGGACT +
Preference number: 3 (lower is better)
Translates to: ELQFPRLKSGFK*GGGLENDIFGT
Trigger: AGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACCCAGACTTGAGTCTAGGGAATTGAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR TCA 72 bp TGCCTAATTCCAAGAGACATTCTCACTTCACAGGGCTaGTTTCAAATCCTTTCTATAGTGGCAAACATGGGT +
Preference number: 3 (lower is better)
Translates to: CLIPRDILTSQG*FQILSIVANMG
Trigger: ACCCATGTTTGCCACTATAGAAAGGATTTGAAATCAGCCCTGTGAAGTGAGAATGTCTCTTGGAATTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGCGCAGCCCTCCACTGTaGACGCGTGTGTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVRSPPL*TRVSLG
Trigger: CCCGAGAGACACACGCGTGCACAGTGGAGGGCTGCG...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTCTCCGCGGGAGTGGCTaGACTGCGGTAGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPALRGSG*TAVERK
Trigger: CTTCCTTTCTACCGCAGTCCAGCCACTCCCGCGGAG...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTGGCACTTTGCACTTGTaGAGCTGGCGGAGGTGCACG +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPAGTLHL*SWRRCT
Trigger: CGTGCACCTCCGCCAGCTCCACAAGTGCAAAGTGCC...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTCTGGCTCGTCTTCACTaGCTACCTGCAGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPALARLH*LPAEAP
Trigger: AGGTGCCTCTGCAGGTAGTCAGTGAAGACGAGCCAG...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTCCACCCATCCGTGCCTaGACTGTTCACACTGACGGT +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPAPPIRA*TVHTDG
Trigger: ACCGTCAGTGTGAACAGTGCAGGCACGGATGGGTGG...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGTCCTGGCTTTGGTCCTaGCCCTGCTCCAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVSWLWS*PCSSMY
Trigger: GTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGA...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCATCCTGCAGCCGCTaGGGAGCCGGCCTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCPSCSR*GAGLPG
Trigger: GCCGGGAAGGCCGGCTCCGCAGCGGCTGCAGGATGG...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTTCTCAAAGGGGTGCATaGCGCCAGGGCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPASQRGA*RQGFLC
Trigger: ACAAAGGAAGCCCTGGCGGCATGCACCCCTTTGAGA...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGTTGCACTTGTGGAGCTaGCGGAGGTGCACGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVLHLWS*RRCTVL
Trigger: CAAAACCGTGCACCTCCGCCAGCTCCACAAGTGCAA...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGCTTGCTTCAGCACACTaGAGAGCCGGTCCAATAGGA +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVLASAH*RAGPIG
Trigger: TCCTATTGGACCGGCTCTTCAGTGTGCTGAAGCAAG...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTTCGTGCACTTGTGCTTaGTCTTTAGGTGGACGGCGT +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPASCTCA*SLGGRR
Trigger: ACGCCGTCCACCTAAAGATCAAGCACAAGTGCACGA...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGCACCACTGTGAAACCTaGGCGCTTGTAGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVHHCET*ALVGLR
Trigger: TCTGAGACCTACAAGCGCCCAGGTTTCACAGTGGTG...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGCCAGCTCCGCGGGAGTaGCTGGACTGCGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVPAPRE*LDCGRK
Trigger: CTTTCTACCGCAGTCCAGCCACTCCCGCGGAGCTGG...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGTCTACTGCGAACAGATaGGAACATCGTGTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVSTANR*EHRVAA
Trigger: GGCTGCAACACGATGTTCTCATCTGTTCGCAGTAGA...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCGGCGAGGGTTGGGGTTaGCGCTGTGTCGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCGEGWG*RCVGSG
Trigger: GCCGGAACCGACACAGCGCCAACCCCAACCCTCGCC...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTGCTGAGAGCTCCATGTaGCTCAATCACAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPAAESSM*LNHRFK
Trigger: CTTGAATCTGTGATTGAGTCACATGGAGCTCTCAGC...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTTGCAGGTTGGGATTCTaGCTGTGTCTGTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPACRLGF*LCLFLL
Trigger: CAGTAGAAACAGACACAGTCAGAATCCCAACCTGCA...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGAGGTTCTCAAAGGGGTaGATGCCGCCAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVRFSKG*MPPGLP
Trigger: AGGAAGCCCTGGCGGCATGCACCCCTTTGAGAACCT...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTGCCTCACTAGTGCATaGTCACCCAGGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVCLTSA*SPRCSS
Trigger: GCTGGAGCACCTGGGTGAGCATGCACTAGTGAGGCA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTCAAGCTTCTTCCTTCTaGCTCACTAGTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPAQASSF*LTSACS
Trigger: TGAGCATGCACTAGTGAGGCAGAAGGAAGAAGCTTG...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGGTGAAATGGCGCTCGTaGCCACCATCCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVVKWRS*PPSSTS
Trigger: AGAGGTGGAGGATGGTGGCCACGAGCGCCATTTCAC...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGAGGCCAGCTGTGAAATaGCGCTCGTGGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLRPAVK*RSWPPS
Trigger: GGATGGTGGCCACGAGCGCCATTTCACAGCTGGCCT...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTTGTAGCTCTCCAGGCTaGCACTGTGAACTTGAGATA +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPACSSPG*HCELEI
Trigger: TATCTCAAGTTCACAGTGCCAGCCTGGAGAGCTACA...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR CAA 72 bp GACTTTGACAAGAAATGTGGAGGCCACCCAGCTTCCTaGGAGAACTCCCTGCCGTTCCATGAGAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: DFDKKCGGHPAS*ENSLPFHERLE
Trigger: CTCCAGTCTCTCATGGAACGGCAGGGAGTTCTCCAAGGAAGCTGGGTGGCCTCCACATTTCTTGTCAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGGGCTCCTCAGGGAGCTaGACACCATGTTACACCCTT +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVGSSGS*TPCYTL
Trigger: AAGGGTGTAACATGGTGTTCAGCTCCCTGAGGAGCC...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGGAGGTGGCTTGGAGATaGAGCCAGGCTCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKEVAWR*SQALVQ
Trigger: CTGCACAAGAGCCTGGCTTCATCTCCAAGCCACCTC...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGTGCAGCCTGGCACTTTaGACTTGTGGAGCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLCSLAL*TCGAGG
Trigger: TCCGCCAGCTCCACAAGTGCAAAGTGCCAGGCTGCA...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGAGGCTGGCACTCCTGTaGCCGCAGCTCTCGATGAAA +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLRLALL*PQLSMK
Trigger: TTTCATCGAGAGCTGCGGCCACAGGAGTGCCAGCCT...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGTCTCAGGCTTCACCTTaGCCTCAGGGGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLSQASP*PQGTAV
Trigger: CACAGCTGTCCCCTGAGGCCAAGGTGAAGCCTGAGA...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGTGTGCAGGCGAGGGTTaGGGTTGGCGCTGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGCAGEG*GWRCVG
Trigger: ACCGACACAGCGCCAACCCCAACCCTCGCCTGCACA...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGTTGCAGATGTCACACTaGAAGCAAGCTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVLQMSH*KQASSF
Trigger: GAAGGAAGAAGCTTGCTTCCAGTGTGACATCTGCAA...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTTTATCTTCCCAGGTTTaGAACATTGGCAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPALSSQV*NIGNCS
Trigger: ACTGCAGTTGCCAATGTTTCAAACCTGGGAAGATAA...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGCCTCCTCACTGGTCATaGTGCTCCAGTGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLPPHWS*CSSDPA
Trigger: TGCTGGATCACTGGAGCATCATGACCAGTGAGGAGG...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGCAGTTTCTGGACAGTTaGGGCACTGTTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVQFLDS*GTVLFQ
Trigger: TTGAAAAAGAACAGTGCCTCAACTGTCCAGAAACTG...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCTCTTCTCGCACGCCGTaGAGAACACCCGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCSSRTP*RTPGPS
Trigger: AGAAGGGCCGGGTGTTCTGCACGGCGTGCGAGAAGA...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGAGCTGTGTCTGTCTCTaGTCCTACGGGAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVSCVCL*SYGKGK
Trigger: CTTTCCCTTCCCGTAGGAGCAGAGACAGACACAGCT...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGCCAGGTTTGAAACATTaGCAACTGCAGTTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVPGLKH*QLQFRV
Trigger: TACTCTGAACTGCAGTTGCCAATGTTTCAAACCTGG...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGGTCCAGTCCAGGGCATaGAGGATCTGTAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVVQSRA*RICRTS
Trigger: TGAGGTTCTACAGATCCTCCATGCCCTGGACTGGAC...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGTTGGGTTCCTGGCTTTaGTCCTGCCCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGLGSWL*SCPCSS
Trigger: GCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAA...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTTCCTTTCAAGCTTACTaGCAATGCTATATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPASFQAY*QCYMSW
Trigger: CCAGCTCATATAGCATTGCCAGTAAGCTTGAAAGGA...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTCAGGAAAAGGGATTTaGGGTACCAGGCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVSGKGI*GTRPAV
Trigger: CACAGCTGGCCTGGTACCCCAAATCCCTTTTCCTGA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGAGGCTAGCAAGGCTCTaGTCTGCCTTCTCCATTAGG +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVRLARL*SAFSIR
Trigger: CCTAATGGAGAAGGCAGACCAGAGCCTTGCTAGCCT...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGGCTCAAGGGTTCTGCTaGGAGCTCCATGTGACTCAA +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKAQGFC*ELHVTQ
Trigger: TTGAGTCACATGGAGCTCTCAGCAGAACCCTTGAGC...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGGTGATGCTTGTGGCGTaGAAGCCACATCCTGATAGG +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKVMLVA*KPHPDR
Trigger: CCTATCAGGATGTGGCTTTCACGCCACAAGCATCAC...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGAAGCGAAGGAACTGCTaGAAGGTAGCCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKKRRNC*KVATSS
Trigger: GGAGGAAGTGGCTACCTTGCAGCAGTTCCTTCGCTT...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCGGGAGTGGCTGGACTaGGGTAGAAAGGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCREWLD*GRKEGL
Trigger: CAGTCCTTCCTTTCTACCGCAGTCCAGCCACTCCCG...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTTATCGAACACCACATTaGACTGGACAATTTCCACTT +
Preference number: 4 (lower is better)
Translates to: EGLPQCQLLTAESCAYPAYRTPH*TGQFPL
Trigger: AAGTGGAAATTGTCCAGTCCAATGTGGTGTTCGATA...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGTCCTGTTTGGGTTCCTaGCTTTGGTCCTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGSCLGS*LWSCPC
Trigger: GCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGA...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGTCCGAGAAGGGCCCATaGAGCTCCTGTTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGSEKGP*SSCLGS
Trigger: GGAACCCAAACAGGAGCTCCATGGGCCCTTCTCGGA...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCGAGGGGCCCACAGTCTaGAGACACCACTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCEGPTV*RHHCET
Trigger: GGTTTCACAGTGGTGTCTCCAGACTGTGGGCCCCTC...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGCGAATGGCATGTCTGTaGAAACCAGCTGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVRMACL*KPAVLG
Trigger: TCCCAGAACAGCTGGTTTCCACAGACATGCCATTCG...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGAGGACTGCTGTCCTCTaGCTCGTCTTCACTGACTAC +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLRTAVL*LVFTDY
Trigger: GTAGTCAGTGAAGACGAGCCAGAGGACAGCAGTCCT...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGCTGCACTGTTCACACTaGCGGTGGTTTATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKLHCSH*RWFIFP
Trigger: TGGGAAGATAAACCACCGTCAGTGTGAACAGTGCAG...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGCTGGAGTCGCTTAAGTaGGCACTGTCTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLLESLK*ALSSFW
Trigger: CCAAAAGGAAGACAGTGCTCACTTAAGCGACTCCAG...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGAGTCCCAGGAGGAATaGCTGCTGCTCTCTGACTTC +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGESQEE*LLLSDF
Trigger: GAAGTCAGAGAGCAGCAGTCATTCCTCCTGGGACTC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGTGGAAGTTAAGAAGCTaGTGTCCGAGAAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLWKLRS*CPRRAH
Trigger: ATGGGCCCTTCTCGGACAGCAGCTTCTTAACTTCCA...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGCTGTTCATTGGCATGTaGAGGCGAGGGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGLFIGM*RRGLGL
Trigger: CAACCCCAACCCTCGCCTGCACATGCCAATGAACAG...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGCACCATTTTGCCCAATaGTTGAGAAAGCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVHHFAQ*LRKQVG
Trigger: GCCAACCTGCTTTCTCAAGCATTGGGCAAAATGGTG...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCAAGCAGGTTGGCCTTTaGAGTCCTCCACGGAACCAG +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCKQVGL*SPPRNQ
Trigger: CTGGTTCCGTGGAGGACTCCAAAGGCCAACCTGCTT...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGCAGGAGGCAGAGGGTTaGAGAACTGGAAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGQEAEG*RTGKAT
Trigger: TGTTGCCTTTCCAGTTCTTCAACCCTCTGCCTCCTG...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGGGTTCAGGCTATTCCTaGGATCTTTGTCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKGSGYS*DLCPCC
Trigger: ACAACAGGGACAAAGATCTCAGGAATAGCCTGAACC...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTGTAGAACCTCATCTTaGTTCAGCACACTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVCRTSS*FSTLKS
Trigger: GCTCTTCAGTGTGCTGAAGCAAGATGAGGTTCTACA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGCAAGCTTACTGGCAATaGTATATGAGCTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLQAYWQ*YMSWSR
Trigger: GCGACTCCAGCTCATATAGCATTGCCAGTAAGCTTG...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGCTTAGCTGTGTATGCTaGTCCTCAGGTACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKLSCVC*SSGTLS
Trigger: AGACAGAGTACCTGAGGAGCAGCATACACAGCTAAG...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTGTGTGTTCTTCTCATaGGTCTTCATGCTGCAAGCG +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKCVFFS*VFMLQA
Trigger: CGCTTGCAGCATGAAGACGCATGAGAAGAACACACA...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTTGCAGAAGGTAAGCTaGACGAAAATGGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVLQKVS*TKMVLT
Trigger: AGTGAGGACCATTTTCGTGCAGCTTACCTTCTGCAA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTCATTCAGTACTTTCTaGTGGAGGCTTAGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVSFSTF*WRLRFE
Trigger: CTCGAACCTAAGCCTCCACCAGAAAGTACTGAATGA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGATCTTTTGGCAGAGATaGCAGGTTATTGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVIFWQR*QVIGKP
Trigger: TGGTTTGCCAATAACCTGTCATCTCTGCCAAAAGAT...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGTAGGTCTCAGAGCTTaGCAGGTTCAGGCTATTCCT +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGVGLRA*QVQAIP
Trigger: AGGAATAGCCTGAACCTGGCAAGCTCTGAGACCTAC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCTTGGGTAAACCAGACTaGCCATGCCACTTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCLGKPD*PCHLFP
Trigger: AGGGAACAAGTGGCATGGGCAGTCTGGTTTACCCAA...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGAGGAGGAATGACTGCTaGTCTCTGACTTCATACTTG +
Preference number: 4 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLRRNDC*SLTSYL
Trigger: CAAGTATGAAGTCAGAGAGCAGCAGTCATTCCTCCT...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGCACTGTCTTCCTTTTaGGGGACAGTTTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGALSSF*GTVSGQ
Trigger: CTGTCCAGAAACTGTCCCCCAAAAGGAAGACAGTGC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCGGAAACCAGCTGTTCTaGGATCGAAGAGGACAACAG +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCGNQLF*DRRGQQ
Trigger: CTGTTGTCCTCTTCGATCCCAGAACAGCTGGTTTCC...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGGCTCTTGTGCAGGTTaGGATTCTGACTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGGSCAG*DSDCVC
Trigger: ACAGACACAGTCAGAATCCCAACCTGCACAAGAGCC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGATGAGAACATCGTGTTaGAGCCTGGCACTTTGCACT +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGMRTSC*SLALCT
Trigger: AGTGCAAAGTGCCAGGCTGCAACACGATGTTCTCAT...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGTTGTTTCTGTTCATTaGCATGTGCAGGCGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGVVSVH*HVQARV
Trigger: AACCCTCGCCTGCACATGCCAATGAACAGAAACAAC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCTGCGGGATTTCTTCTTaGGAAGAGCATCGAATGGCA +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCCGISS*EEHRMA
Trigger: TGCCATTCGATGCTCTTCCCAAGAAGAAATCCCGCA...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
3UTR CAA 72 bp CTAGACTCAAGTCTGGGTTTAAATGGGGAGGAGGACTaGAAAATGACATCTTTGGGACTGGTGTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LDSSLGLNGEED*KMTSLGLVSCP
Trigger: TGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACCCAGACTTGAGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTGTTCTTTTTCAACCTaGAATGGGGTGGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKCSFST*NGVEVK
Trigger: CTTAACTTCCACCCCATTTCAGGTTGAAAAAGAACA...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR TCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGATTTTGCCCAATGCTTaGGAAAGCAGGTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGILPNA*ESRLAF
Trigger: AAAGGCCAACCTGCTTTCTCAAGCATTGGGCAAAAT...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGCTCACTAGTCTCCAATaGTTCTTCATTCAGTACTTT +
Preference number: 4 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVLTSLQ*FFIQYF
Trigger: AAAGTACTGAATGAAGAAGCATTGGAGACTAGTGAG...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGTGGACAATTTCCACTTaGCTTGTTGGATACACAGGG +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGWTIST*LVGYTG
Trigger: CCCTGTGTATCCAACAAGCCAAGTGGAAATTGTCCA...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGTTCAACTATGGACTTaGTCTCTCCAAAGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGVQLWT*SLQSEG
Trigger: TCCTTCGCTTTGGAGAGACCAAGTCCATAGTTGAAC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGAAAGGAAGGACTGGCTaGACAGTCTTTAGATTAGGG +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGKGRTG*TVFRLG
Trigger: CCCTAATCTAAAGACTGTCCAGCCAGTCCTTCCTTT...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGGTACGATGACAGACTaGTCTTCTTTCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGGTMTD*SSFSWI
Trigger: AATCCAAGAGAAAGAAGAGCAGTCTGTCATCGTACC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CCA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCATCACAGATTCAAGATaGCAGGCTCTTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCITDSR*QALSPC
Trigger: ACAAGGAGAAAGAGCCTGCCATCTTGAATCTGTGAT...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR GCA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGAAAAGCACACCATTTTaGCCAATGCTTGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGKSTPF*PMLEKA
Trigger: TGCTTTCTCAAGCATTGGGCAAAATGGTGTGCTTTT...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp GCTGTTCTGGGATCGAAGAGGACAACAGAGGGAGGGAAGGCAGCATaGCGGGTGTGTTGGCCAGCTCCGCGGGAGTGGCTGGACTGCGGT +
Preference number: 5 (lower is better)
Translates to: AVLGSKRTTEGGKAA*RVCWPAPREWLDCG
Trigger: ACCGCAGTCCAGCCACTCCCGCGGAGCTGGCCAACACACCCGGCATGCTGCCTTCCCTCCCTCTGTTGTCCTCTTCGATCCCAGAACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGAGGCGAGGGTTGGGGTaGGCGCTGTGTCGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVRRGLG*ALCRFR
Trigger: CCGGAACCGACACAGCGCCAACCCCAACCCTCGCCT...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp GGAGGGAAGGCAGCATGCCGGGTGTGTTGGCCAGCTCCGCGGGAGTaGCTGGACTGCGGTAGAAAGGAAGGACTGGCTGGACAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: GGKAACRVCWPAPRE*LDCGRKEGLAGQSL
Trigger: TAAAGACTGTCCAGCCAGTCCTTCCTTTCTACCGCAGTCCAGCCACTCCCGCGGAGCTGGCCAACACACCCGGCATGCTGCCTTCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp TCGAAGAGGACAACAGAGGGAGGGAAGGCAGCATGCCGGGTGTGTTaGCCAGCTCCGCGGGAGTGGCTGGACTGCGGTAGAAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SKRTTEGGKAACRVC*PAPREWLDCGRKEG
Trigger: TCCTTCCTTTCTACCGCAGTCCAGCCACTCCCGCGGAGCTGGCCAACACACCCGGCATGCTGCCTTCCCTCCCTCTGTTGTCCTCTTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp GGCCCATGGAGCTCCTGTTTGGGTTCCTGGCTTTGGTCCTGCCCCTaGTCCAGCATGTACTGTTCAGGCAGCGACCCTATCAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GPWSSCLGSWLWSCP*SSMYCSGSDPIRAG
Trigger: TCCTGCTCTGATAGGGTCGCTGCCTGAACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp CCAGGGCTTCCTTTGTCCACAGGAGTAGGGAGGCTGGCACTCCTGTaGCCGCAGCTCTCGATGAAAGCCCTGATGTCTACATTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: PGLPLSTGVGRLALL*PQLSMKALMSTLAV
Trigger: CACGGCCAATGTAGACATCAGGGCTTTCATCGAGAGCTGCGGCCACAGGAGTGCCAGCCTCCCTACTCCTGTGGACAAAGGAAGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp AAGCTGCTGTCCGAGAAGGGCCCATGGAGCTCCTGTTTGGGTTCCTaGCTTTGGTCCTGCCCCTGCTCCAGCATGTACTGTTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: KLLSEKGPWSSCLGS*LWSCPCSSMYCSGS
Trigger: GCTGCCTGAACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTCTCGGACAGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTCTCTCAGGCTTCACCTaGGCCTCAGGGGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: EGLPQCQLLTAESCAYPALSGFT*ASGDSC
Trigger: ACAGCTGTCCCCTGAGGCCAAGGTGAAGCCTGAGAG...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp GAGAAGGGCCCATGGAGCTCCTGTTTGGGTTCCTGGCTTTGGTCCTaGCCCTGCTCCAGCATGTACTGTTCAGGCAGCGACCCTATCAGA +
Preference number: 5 (lower is better)
Translates to: EKGPWSSCLGSWLWS*PCSSMYCSGSDPIR
Trigger: TCTGATAGGGTCGCTGCCTGAACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp GTAGCCAGGGAGGGGCCCACAGTCTGGAGACACCACTGTGAAACCTaGGCGCTTGTAGGTCTCAGAGCTTGCCAGGTTCAGGCTATTCCT +
Preference number: 5 (lower is better)
Translates to: VAREGPTVWRHHCET*ALVGLRACQVQAIP
Trigger: AGGAATAGCCTGAACCTGGCAAGCTCTGAGACCTACAAGCGCCCAGGTTTCACAGTGGTGTCTCCAGACTGTGGGCCCCTCCCTGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTCTCCTTGGCCACATCTaGCAGAAGGTAAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: EGLPQCQLLTAESCAYPALLGHI*QKVSCT
Trigger: CGTGCAGCTTACCTTCTGCAAGATGTGGCCAAGGAG...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp CTTGGGAAGAGCATCGAATGGCATGTCTGTGGAAACCAGCTGTTCTaGGATCGAAGAGGACAACAGAGGGAGGGAAGGCAGCATGCCGGG +
Preference number: 5 (lower is better)
Translates to: LGKSIEWHVCGNQLF*DRRGQQREGRQHAG
Trigger: CCCGGCATGCTGCCTTCCCTCCCTCTGTTGTCCTCTTCGATCCCAGAACAGCTGGTTTCCACAGACATGCCATTCGATGCTCTTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp GGAAAAGGGATTTGGGGTACCAGGCCAGCTGTGAAATGGCGCTCGTaGCCACCATCCTCCACCTCTCTTGGCATCACTGAACTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: GKGIWGTRPAVKWRS*PPSSTSLGITELSA
Trigger: AGCACTGAGTTCAGTGATGCCAAGAGAGGTGGAGGATGGTGGCCACGAGCGCCATTTCACAGCTGGCCTGGTACCCCAAATCCCTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGGCCCTGATGTCTACATaGGCCGTGGTGGGCGGTACG +
Preference number: 5 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVALMST*AVVGGT
Trigger: CGTACCGCCCACCACGGCCAATGTAGACATCAGGGC...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGATGTGCAGGCGAGGGTaGGGGTTGGCGCTGTGTCGG +
Preference number: 5 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLMCRRG*GLALCR
Trigger: CCGACACAGCGCCAACCCCAACCCTCGCCTGCACAT...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGAGAGATGACAGGTTATaGGCAAACCAGAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVRDDRL*ANQRAG
Trigger: GCCTGCCCTCTGGTTTGCCAATAACCTGTCATCTCT...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTGATGAGAACATCGTGTaGCAGCCTGGCACTTTGCAC +
Preference number: 5 (lower is better)
Translates to: EGLPQCQLLTAESCAYPADENIV*QPGTLH
Trigger: GTGCAAAGTGCCAGGCTGCAACACGATGTTCTCATC...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 90 bp ACTCCATGTAGTCAGGAAAAGGGATTTGGGGTACCAGGCCAGCTGTaGAATGGCGCTCGTGGCCACCATCCTCCACCTCTCTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: TPCSQEKGFGVPGQL*NGARGHHPPPLLAS
Trigger: TGATGCCAAGAGAGGTGGAGGATGGTGGCCACGAGCGCCATTTCACAGCTGGCCTGGTACCCCAAATCCCTTTTCCTGACTACATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp TCTGACCTAGGACTGCTGTCCTCTGGCTCGTCTTCACTGACTACCTaGAGAGGCACCTCATCGTCTGAGCTGAGACTGTGTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SDLGLLSSGSSSLTT*RGTSSSELRLCLFS
Trigger: GGAGAAGAGACACAGTCTCAGCTCAGACGATGAGGTGCCTCTGCAGGTAGTCAGTGAAGACGAGCCAGAGGACAGCAGTCCTAGGTCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp AAGTTAAGAAGCTGCTGTCCGAGAAGGGCCCATGGAGCTCCTGTTTaGGTTCCTGGCTTTGGTCCTGCCCCTGCTCCAGCATGTACTGTT +
Preference number: 5 (lower is better)
Translates to: KLRSCCPRRAHGAPV*VPGFGPAPAPACTV
Trigger: AACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTCTCGGACAGCAGCTTCTTAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGCCGCCAGGGCTTCCTTaGTCCACAGGAGTAGGGAGG +
Preference number: 5 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLPPGLP*STGVGR
Trigger: CCTCCCTACTCCTGTGGACAAAGGAAGCCCTGGCGG...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGCTGGACAATTTCCACTaGGCTTGTTGGATACACAGG +
Preference number: 5 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVLDNFH*ACWIHR
Trigger: CCTGTGTATCCAACAAGCCAAGTGGAAATTGTCCAG...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTGCTGGCACTGTGAACTaGAGATATTGGGTAAACCAG +
Preference number: 5 (lower is better)
Translates to: EGLPQCQLLTAESCAYPAAGTVN*RYWVNQ
Trigger: CTGGTTTACCCAATATCTCAAGTTCACAGTGCCAGC...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTTGCAGCCTGGCACTTaGCACTTGTGGAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKLQPGT*HLWSWR
Trigger: CCGCCAGCTCCACAAGTGCAAAGTGCCAGGCTGCAA...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 90 bp CAGACTGCCCATGCCACTTGTTCCCTTGAAGATGACAGATGTCTGTaGTGCTTGTGGCGTGAAAGCCACATCCTGATAGGCCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: QTAHATCSLEDDRCL*CLWRESHILIGLLG
Trigger: GCCAAGGAGGCCTATCAGGATGTGGCTTTCACGCCACAAGCATCACAGACATCTGTCATCTTCAAGGGAACAAGTGGCATGGGCAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 90 bp AGGGCAGTGCCTTCCTCACTCACGCCATCAGAGTCCCAGGAGGAATaGCTGCTGCTCTCTGACTTCATACTTGAGGTAGTGCTCAAATCC +
Preference number: 5 (lower is better)
Translates to: RAVPSSLTPSESQEE*LLLSDFILEVVLKS
Trigger: GGATTTGAGCACTACCTCAAGTATGAAGTCAGAGAGCAGCAGTCATTCCTCCTGGGACTCTGATGGCGTGAGTGAGGAAGGCACTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp GGCACTGTTCTTTTTCAACCTGAAATGGGGTGGAAGTTAAGAAGCTaGTGTCCGAGAAGGGCCCATGGAGCTCCTGTTTGGGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GTVLFQPEMGWKLRS*CPRRAHGAPVWVPG
Trigger: GCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTCTCGGACAGCAGCTTCTTAACTTCCACCCCATTTCAGGTTGAAAAAGAACAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp CTTTCTCCTTGTGGAAGAGGCTCCTCTAAGCTTAGCTGTGTATGCTaGTCCTCAGGTACTCTGTCTGACCTAGGACTGCTGTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: LSPCGRGSSKLSCVC*SSGTLSDLGLLSSG
Trigger: GCCAGAGGACAGCAGTCCTAGGTCAGACAGAGTACCTGAGGAGCAGCATACACAGCTAAGCTTAGAGGAGCCTCTTCCACAAGGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp GCCATGAGTTCAACTATGGACTTGGTCTCTCCAAAGCGAAGGAACTaGTGCAAGGTAGCCACTTCCTCCTCACTGGTCATGATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: AMSSTMDLVSPKRRN*CKVATSSSLVMMLQ
Trigger: CTGGAGCATCATGACCAGTGAGGAGGAAGTGGCTACCTTGCAGCAGTTCCTTCGCTTTGGAGAGACCAAGTCCATAGTTGAACTCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp AAAGGCAACATGAACGTCATGTTGCTTATAAGGTTCTCAAAGGGGTaGATGCCGCCAGGGCTTCCTTTGTCCACAGGAGTAGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KGNMNVMLLIRFSKG*MPPGLPLSTGVGRL
Trigger: CAGCCTCCCTACTCCTGTGGACAAAGGAAGCCCTGGCGGCATGCACCCCTTTGAGAACCTTATAAGCAACATGACGTTCATGTTGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp GCTCTTTCTCCTTGTGGAAGAGGCTCCTCTAAGCTTAGCTGTGTATaGTGCTCCTCAGGTACTCTGTCTGACCTAGGACTGCTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: ALSPCGRGSSKLSCV*CSSGTLSDLGLLSS
Trigger: AGAGGACAGCAGTCCTAGGTCAGACAGAGTACCTGAGGAGCAGCATACACAGCTAAGCTTAGAGGAGCCTCTTCCACAAGGAGAAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp ACTTGCGGGATTTCTTCTTGGGAAGAGCATCGAATGGCATGTCTGTaGAAACCAGCTGTTCTGGGATCGAAGAGGACAACAGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: TCGISSWEEHRMACL*KPAVLGSKRTTEGG
Trigger: CCCTCCCTCTGTTGTCCTCTTCGATCCCAGAACAGCTGGTTTCCACAGACATGCCATTCGATGCTCTTCCCAAGAAGAAATCCCGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGTTTATCTTCCCAGGTTaGAAACATTGGCAACTGCAG +
Preference number: 5 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVFIFPG*KHWQLQ
Trigger: CTGCAGTTGCCAATGTTTCAAACCTGGGAAGATAAA...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGATATCGAACACCACATaGGACTGGACAATTTCCACT +
Preference number: 5 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVISNTT*DWTIST
Trigger: AGTGGAAATTGTCCAGTCCAATGTGGTGTTCGATAT...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTGTAGGTCTCAGAGCTaGCCAGGTTCAGGCTATTCC +
Preference number: 5 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVCRSQS*PGSGYS
Trigger: GGAATAGCCTGAACCTGGCAAGCTCTGAGACCTACA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp GCCCTGATGTCTACATTGGCCGTGGTGGGCGGTACGATGACAGACTaGTCTTCTTTCTCTTGGATTGCCATGAGTTCAACTATGGACTTG +
Preference number: 5 (lower is better)
Translates to: ALMSTLAVVGGTMTD*SSFSWIAMSSTMDL
Trigger: CAAGTCCATAGTTGAACTCATGGCAATCCAAGAGAAAGAAGAGCAGTCTGTCATCGTACCGCCCACCACGGCCAATGTAGACATCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp TGGAGACACCACTGTGAAACCTGGGCGCTTGTAGGTCTCAGAGCTTaGCAGGTTCAGGCTATTCCTGAGATCTTTGTCCCTGTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: WRHHCETWALVGLRA*QVQAIPEIFVPVVS
Trigger: AGAAACAACAGGGACAAAGATCTCAGGAATAGCCTGAACCTGGCAAGCTCTGAGACCTACAAGCGCCCAGGTTTCACAGTGGTGTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp AAGCAAGCTTCTTCCTTCTGCCTCACTAGTGCATGCTCACCCAGGTaGTCCAGCTCTTTAGACTCTTCCAGAAAAGGAAAAGCCATCCCC +
Preference number: 5 (lower is better)
Translates to: KQASSFCLTSACSPR*SSSLDSSRKGKAIP
Trigger: GGGGATGGCTTTTCCTTTTCTGGAAGAGTCTAAAGAGCTGGAGCACCTGGGTGAGCATGCACTAGTGAGGCAGAAGGAAGAAGCTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp AAGGTCTTCTTGCAGATGTCACACTGGAAGCAAGCTTCTTCCTTCTaGCTCACTAGTGCATGCTCACCCAGGTGCTCCAGCTCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: KVFLQMSHWKQASSF*LTSACSPRCSSSLD
Trigger: GTCTAAAGAGCTGGAGCACCTGGGTGAGCATGCACTAGTGAGGCAGAAGGAAGAAGCTTGCTTCCAGTGTGACATCTGCAAGAAGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp TCCACTGTGCACGCGTGTGTCTCTCGGGCGTGTGTGTTCTTCTCATaGGTCTTCATGCTGCAAGCGTTTTTAAAGGTCTTCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: STVHACVSRACVFFS*VFMLQAFLKVFLQM
Trigger: CATCTGCAAGAAGACCTTTAAAAACGCTTGCAGCATGAAGACGCATGAGAAGAACACACACGCCCGAGAGACACACGCGTGCACAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp TTGGCCGTGGTGGGCGGTACGATGACAGACTGCTCTTCTTTCTCTTaGATTGCCATGAGTTCAACTATGGACTTGGTCTCTCCAAAGCGA +
Preference number: 5 (lower is better)
Translates to: LAVVGGTMTDCSSFS*IAMSSTMDLVSPKR
Trigger: TCGCTTTGGAGAGACCAAGTCCATAGTTGAACTCATGGCAATCCAAGAGAAAGAAGAGCAGTCTGTCATCGTACCGCCCACCACGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp GCTTCACCTTGGCCTCAGGGGACAGCTGTGTCCTTTCAAGCTTACTaGCAATGCTATATGAGCTGGAGTCGCTTAAGTGAGCACTGTCTT +
Preference number: 5 (lower is better)
Translates to: ASPWPQGTAVSFQAY*QCYMSWSRLSEHCL
Trigger: AAGACAGTGCTCACTTAAGCGACTCCAGCTCATATAGCATTGCCAGTAAGCTTGAAAGGACACAGCTGTCCCCTGAGGCCAAGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGTTGCGGGATTTCTTCTaGGGAAGAGCATCGAATGGC +
Preference number: 5 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVLRDFF*GRASNG
Trigger: GCCATTCGATGCTCTTCCCAAGAAGAAATCCCGCAA...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGAAAGCCATCCCCCTGTaGGACAAAGCACCGAAGAGT +
Preference number: 5 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKKAIPL*DKAPKS
Trigger: ACTCTTCGGTGCTTTGTCCAACAGGGGGATGGCTTT...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCACCCCAGTGGGCCAACAGACACTGCAGTTCACCACCTGAAGACAGGCTGGTGTTTTTAAAGGTCTTCTaGCAGATGTCACACTGGAAG +
Preference number: 5 (lower is better)
Translates to: SPQWANRHCSSPPEDRLVFLKVF*QMSHWK
Trigger: CTTCCAGTGTGACATCTGCAAGAAGACCTTTAAAAA...CACCAGCCTGTCTTCAGGTGGTGAACTGCAGTGTCTGTTGGCCCACTGGGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGCTCTGTCCTTCACAGTaGCCATCACTGTCCTCCATA +
Preference number: 5 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVLCPSQ*PSLSSI
Trigger: TATGGAGGACAGTGATGGCAACTGTGAAGGACAGAG...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 90 bp AGGTGGCTTGGAGATGAAGCCAGGCTCTTGTGCAGGTTGGGATTCTaGCTGTGTCTGTTTCTACTGCGAACAGATGAGAACATCGTGTTG +
Preference number: 5 (lower is better)
Translates to: RWLGDEARLLCRLGF*LCLFLLRTDENIVL
Trigger: CAACACGATGTTCTCATCTGTTCGCAGTAGAAACAGACACAGTCAGAATCCCAACCTGCACAAGAGCCTGGCTTCATCTCCAAGCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp CCTTGGCCTCAGGGGACAGCTGTGTCCTTTCAAGCTTACTGGCAATaGTATATGAGCTGGAGTCGCTTAAGTGAGCACTGTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: PWPQGTAVSFQAYWQ*YMSWSRLSEHCLPF
Trigger: AAAAGGAAGACAGTGCTCACTTAAGCGACTCCAGCTCATATAGCATTGCCAGTAAGCTTGAAAGGACACAGCTGTCCCCTGAGGCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp AGGACTGGCTGGACAGTCTTTAGATTAGGGAAAAGCACACCATTTTaGCCAATGCTTGAGAAAGCAGGTTGGCCTTTGGAGTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: RTGWTVFRLGKSTPF*PMLEKAGWPLESST
Trigger: CGTGGAGGACTCCAAAGGCCAACCTGCTTTCTCAAGCATTGGGCAAAATGGTGTGCTTTTCCCTAATCTAAAGACTGTCCAGCCAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp AGGCATACTGGACTTGCGGGATTTCTTCTTGGGAAGAGCATCGAATaGCATGTCTGTGGAAACCAGCTGTTCTGGGATCGAAGAGGACAA +
Preference number: 5 (lower is better)
Translates to: RHTGLAGFLLGKSIE*HVCGNQLFWDRRGQ
Trigger: TTGTCCTCTTCGATCCCAGAACAGCTGGTTTCCACAGACATGCCATTCGATGCTCTTCCCAAGAAGAAATCCCGCAAGTCCAGTATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp TGGTCCTCACTAGTCTCCAATGCTTCTTCATTCAGTACTTTCTGGTaGAGGCTTAGGTTCGAGCTGTGTCTGTCTCTGCTCCTACGGGAA +
Preference number: 5 (lower is better)
Translates to: WSSLVSNASSFSTFW*RLRFELCLSLLLRE
Trigger: TTCCCGTAGGAGCAGAGACAGACACAGCTCGAACCTAAGCCTCCACCAGAAAGTACTGAATGAAGAAGCATTGGAGACTAGTGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGAAAGCAGGTTGGCCTTaGGAGTCCTCCACGGAACCA +
Preference number: 5 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGKAGWP*ESSTEP
Trigger: TGGTTCCGTGGAGGACTCCAAAGGCCAACCTGCTTT...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCACGGTGATGGTGATAGGCATACTGGACTaGCGGGATTTCTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GGLENDIFGTGVMPTVMVIGILD*RDFFLG
Trigger: TCCCAAGAAGAAATCCCGCAAGTCCAGTATGCCTAT...CACCATCACCGTGGGCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCGTCAGGAAAAGGGATTaGGGGTACCAGGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCVRKRD*GYQASC
Trigger: ACAGCTGGCCTGGTACCCCAAATCCCTTTTCCTGAC...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GAAGGGCTACCCCAGTGTCAGCTTCTCACAGCCGAGTCTTGCGCTTACCCTGCTGTTACTGTATATCTTTaGGCAGAGATGACAGGTTAT +
Preference number: 5 (lower is better)
Translates to: EGLPQCQLLTAESCAYPAVTVYL*AEMTGY
Trigger: ATAACCTGTCATCTCTGCCAAAAGATATACAGTAAC...AGCAGGGTAAGCGCAAGACTCGGCTGTGAGAAGCTGACACTGGGGTAGCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 90 bp TGGGCTCTAAAGGTCCCTTTGTTACTGTATATCTTTTGGCAGAGATaGCAGGTTATTGGCAAACCAGAGGGCAGGCTAGCAAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: WALKVPLLLYIFWQR*QVIGKPEGRLARLW
Trigger: CCAGAGCCTTGCTAGCCTGCCCTCTGGTTTGCCAATAACCTGTCATCTCTGCCAAAAGATATACAGTAACAAAGGGACCTTTAGAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 90 bp CACATCCTGATAGGCCTCCTTGGCCACATCTTGCAGAAGGTAAGCTaGACGAAAATGGTCCTCACTAGTCTCCAATGCTTCTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: HILIGLLGHILQKVS*TKMVLTSLQCFFIQ
Trigger: CTGAATGAAGAAGCATTGGAGACTAGTGAGGACCATTTTCGTGCAGCTTACCTTCTGCAAGATGTGGCCAAGGAGGCCTATCAGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp GGGACAGCTGTGTCCTTTCAAGCTTACTGGCAATGCTATATGAGCTaGAGTCGCTTAAGTGAGCACTGTCTTCCTTTTGGGGGACAGTTT +
Preference number: 5 (lower is better)
Translates to: GTAVSFQAYWQCYMS*SRLSEHCLPFGGQF
Trigger: AAACTGTCCCCCAAAAGGAAGACAGTGCTCACTTAAGCGACTCCAGCTCATATAGCATTGCCAGTAAGCTTGAAAGGACACAGCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp AAATGGTCCTCACTAGTCTCCAATGCTTCTTCATTCAGTACTTTCTaGTGGAGGCTTAGGTTCGAGCTGTGTCTGTCTCTGCTCCTACGG +
Preference number: 5 (lower is better)
Translates to: KWSSLVSNASSFSTF*WRLRFELCLSLLLR
Trigger: CCGTAGGAGCAGAGACAGACACAGCTCGAACCTAAGCCTCCACCAGAAAGTACTGAATGAAGAAGCATTGGAGACTAGTGAGGACCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGCATTTTGCCCAATGCTaGAGAAAGCAGGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLHFAQC*RKQVGL
Trigger: AAGGCCAACCTGCTTTCTCAAGCATTGGGCAAAATG...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 90 bp TTCATGCTGCAAGCGTTTTTAAAGGTCTTCTTGCAGATGTCACACTaGAAGCAAGCTTCTTCCTTCTGCCTCACTAGTGCATGCTCACCC +
Preference number: 5 (lower is better)
Translates to: FMLQAFLKVFLQMSH*KQASSFCLTSACSP
Trigger: GGGTGAGCATGCACTAGTGAGGCAGAAGGAAGAAGCTTGCTTCCAGTGTGACATCTGCAAGAAGACCTTTAAAAACGCTTGCAGCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCAGCACTGTCTTCCTTTaGGGGGACAGTTTCTGGACA +
Preference number: 5 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCSTVFL*GDSFWT
Trigger: TGTCCAGAAACTGTCCCCCAAAAGGAAGACAGTGCT...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCCTTCGATCGTGCACTaGTGCTTGATCTTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCPSIVH*CLIFRW
Trigger: CCACCTAAAGATCAAGCACAAGTGCACGATCGAAGG...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCTGTTGTTTCTGTTCATaGGCATGTGCAGGCGAGGGT +
Preference number: 5 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCCCFCS*ACAGEG
Trigger: ACCCTCGCCTGCACATGCCAATGAACAGAAACAACA...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGAGTTCAACTATGGACTaGGTCTCTCCAAAGCGAAGG +
Preference number: 5 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGSSTMD*VSPKRR
Trigger: CCTTCGCTTTGGAGAGACCAAGTCCATAGTTGAACT...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGTCTGCTATTCCTGAGATCTTaGTCCCTGTTGTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SQCRDGCSLNFNSLDSSLLFLRS*SLLFLF
Trigger: GAACAGAAACAACAGGGACAAAGATCTCAGGAATAG...CAGACTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCCTGCTCTTCTTTCTCTaGGATTGCCATGAGTTCAAC +
Preference number: 5 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCLLFFL*DCHEFN
Trigger: GTTGAACTCATGGCAATCCAAGAGAAAGAAGAGCAG...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp CAACTCCCAATGCAGGGACGGATGCTCTCTGAACTTCAATTCCCTAGACTCAAGGCTTCTTTCTCTATTTaGATAGGCATACTGGACTTG +
Preference number: 5 (lower is better)
Translates to: QLPMQGRMLSELQFPRLKASFSI*IGILDL
Trigger: CAAGTCCAGTATGCCTATCAAAATAGAGAAAGAAGC...CTTGAGTCTAGGGAATTGAAGTTCAGAGAGCATCCGTCCCTGCATTGGGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp GGTTTAAATGGGGAGGAGGACTTGAAAATGACATCTTTGGGACTGGTGTCATGCACAGTTTCTGGACAGTaGAGGCACTGTTCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: GLNGEEDLKMTSLGLVSCTVSGQ*RHCSFS
Trigger: TGAAAAAGAACAGTGCCTCAACTGTCCAGAAACTGT...GCATGACACCAGTCCCAAAGATGTCATTTTCAAGTCCTCCTCCCCATTTAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGGCTCTAAAGGTCCCTTaGTTACTGTATATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGALKVP*LLYIFW
Trigger: CCAAAAGATATACAGTAACAAAGGGACCTTTAGAGC...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS-3UTR CAA 90 bp TCTGGGAAATCTGGCTTTCTGTGTTTTCCTTGTGTCGGTGGAAAACTTTGTGGGAACATGAACGTCATGTaGCTTATAAGGTTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SGKSGFLCFPCVGGKLCGNMNVM*LIRFSK
Trigger: CTTTGAGAACCTTATAAGCAACATGACGTTCATGTT...CCCACAAAGTTTTCCACCGACACAAGGAAAACACAGAAAGCCAGATTTCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp GGATCGAAGAGGACAACAGAGGGAGGGAAGGCAGCATaGCGGGTGTGTTGGCCAGCTCCGCGGGAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GSKRTTEGGKAA*RVCWPAPREWL
Trigger: CAGCCACTCCCGCGGAGCTGGCCAACACACCCGGCATGCTGCCTTCCCTCCCTCTGTTGTCCTCTTCGATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp GCTGTCCGAGAAGGGCCCATGGAGCTCCTGTTTGGGTTCCTGGCTTaGGTCCTGCCCCTGCTCCAGCATGTACTGTTCAGGCAGCGACCC +
Preference number: 6 (lower is better)
Translates to: AVREGPMELLFGFLA*VLPLLQHVLFRQRP
Trigger: GGGTCGCTGCCTGAACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTCTCGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp TACGGGAAGGGAAAGCAGCCCCGCAGCCCTCCACTGTaGACGCGTGTGTCTCTCGGGCGTGTGTGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: YGKGKQPRSPPL*TRVSLGRVCSS
Trigger: AGAAGAACACACACGCCCGAGAGACACACGCGTGCACAGTGGAGGGCTGCGGGGCTGCTTTCCCTTCCCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp AGCCAGGGAGGGGCCCACAGTCTGGAGACACCACTGTaGAACCTGGGCGCTTGTAGGTCTCAGAGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: SQGGAHSLETPL*NLGACRSQSLP
Trigger: TGGCAAGCTCTGAGACCTACAAGCGCCCAGGTTTCACAGTGGTGTCTCCAGACTGTGGGCCCCTCCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp CGGGTGTGTTGGCCAGCTCCGCGGGAGTGGCTGGACTaGGGTAGAAAGGAAGGACTGGCTGGACAGTCTTTA +
Preference number: 6 (lower is better)
Translates to: RVCWPAPREWLD*GRKEGLAGQSL
Trigger: TAAAGACTGTCCAGCCAGTCCTTCCTTTCTACCGCAGTCCAGCCACTCCCGCGGAGCTGGCCAACACACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp AGGTTCTCAAAGGGGTGCATGCCGCCAGGGCTTCCTTaGTCCACAGGAGTAGGGAGGCTGGCACTCCTGTGG +
Preference number: 6 (lower is better)
Translates to: RFSKGCMPPGLP*STGVGRLALLW
Trigger: CCACAGGAGTGCCAGCCTCCCTACTCCTGTGGACAAAGGAAGCCCTGGCGGCATGCACCCCTTTGAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp TTTCTGTTCATTGGCATGTGCAGGCGAGGGTTGGGGTaGGCGCTGTGTCGGTTCCGGCTCCTCAGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: FLFIGMCRRGLG*ALCRFRLLREL
Trigger: CAGCTCCCTGAGGAGCCGGAACCGACACAGCGCCAACCCCAACCCTCGCCTGCACATGCCAATGAACAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp TCCGAGAAGGGCCCATGGAGCTCCTGTTTGGGTTCCTaGCTTTGGTCCTGCCCCTGCTCCAGCATGTACTGT +
Preference number: 6 (lower is better)
Translates to: SEKGPWSSCLGS*LWSCPCSSMYC
Trigger: ACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp TGTTGTTTCTGTTCATTGGCATGTGCAGGCGAGGGTTaGGGTTGGCGCTGTGTCGGTTCCGGCTCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: CCFCSLACAGEG*GWRCVGSGSSG
Trigger: CCCTGAGGAGCCGGAACCGACACAGCGCCAACCCCAACCCTCGCCTGCACATGCCAATGAACAGAAACAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp GGAAAAGGGATTTGGGGTACCAGGCCAGCTGTGAAATaGCGCTCGTGGCCACCATCCTCCACCTCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: GKGIWGTRPAVK*RSWPPSSTSLG
Trigger: GCCAAGAGAGGTGGAGGATGGTGGCCACGAGCGCCATTTCACAGCTGGCCTGGTACCCCAAATCCCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp GAAGGGCCCATGGAGCTCCTGTTTGGGTTCCTGGCTTaGGTCCTGCCCCTGCTCCAGCATGTACTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: EGPMELLFGFLA*VLPLLQHVLFR
Trigger: CCTGAACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp CTGTTGTTTCTGTTCATTGGCATGTGCAGGCGAGGGTaGGGGTTGGCGCTGTGTCGGTTCCGGCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LLFLFIGMCRRG*GLALCRFRLLR
Trigger: CCTGAGGAGCCGGAACCGACACAGCGCCAACCCCAACCCTCGCCTGCACATGCCAATGAACAGAAACAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp TTGCTTATAAGGTTCTCAAAGGGGTGCATGCCGCCAGGGCTTCCTTaGTCCACAGGAGTAGGGAGGCTGGCACTCCTGTGGCCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLIRFSKGCMPPGLP*STGVGRLALLWPQL
Trigger: GAGCTGCGGCCACAGGAGTGCCAGCCTCCCTACTCCTGTGGACAAAGGAAGCCCTGGCGGCATGCACCCCTTTGAGAACCTTATAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp TCCCTGTTGTTTCTGTTCATTGGCATGTGCAGGCGAGGGTTGGGGTaGGCGCTGTGTCGGTTCCGGCTCCTCAGGGAGCTGAACACCATG +
Preference number: 6 (lower is better)
Translates to: SLLFLFIGMCRRGLG*ALCRFRLLRELNTM
Trigger: CATGGTGTTCAGCTCCCTGAGGAGCCGGAACCGACACAGCGCCAACCCCAACCCTCGCCTGCACATGCCAATGAACAGAAACAACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp TCTTTGTCCCTGTTGTTTCTGTTCATTGGCATGTGCAGGCGAGGGTaGGGGTTGGCGCTGTGTCGGTTCCGGCTCCTCAGGGAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: SLSLLFLFIGMCRRG*GLALCRFRLLRELN
Trigger: GTTCAGCTCCCTGAGGAGCCGGAACCGACACAGCGCCAACCCCAACCCTCGCCTGCACATGCCAATGAACAGAAACAACAGGGACAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp AGCAAGCAGGCGCTGCTGCAACTCCATGTAGTCAGGAAAAGGGATTaGGGGTACCAGGCCAGCTGTGAAATGGCGCTCGTGGCCACCATC +
Preference number: 6 (lower is better)
Translates to: SKQALLQLHVVRKRD*GYQASCEMALVATI
Trigger: GATGGTGGCCACGAGCGCCATTTCACAGCTGGCCTGGTACCCCAAATCCCTTTTCCTGACTACATGGAGTTGCAGCAGCGCCTGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp GGTTGGCGCTGTGTCGGTTCCGGCTCCTCAGGGAGCTaGACACCATGTTACACCCTTCGATCGTGCACTTGT +
Preference number: 6 (lower is better)
Translates to: GWRCVGSGSSGS*TPCYTLRSCTC
Trigger: ACAAGTGCACGATCGAAGGGTGTAACATGGTGTTCAGCTCCCTGAGGAGCCGGAACCGACACAGCGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp AGTCAGGAAAAGGGATTTGGGGTACCAGGCCAGCTGTaGAATGGCGCTCGTGGCCACCATCCTCCACCTCTC +
Preference number: 6 (lower is better)
Translates to: SQEKGFGVPGQL*NGARGHHPPPL
Trigger: GAGAGGTGGAGGATGGTGGCCACGAGCGCCATTTCACAGCTGGCCTGGTACCCCAAATCCCTTTTCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp CCTTTGTCCACAGGAGTAGGGAGGCTGGCACTCCTGTaGCCGCAGCTCTCGATGAAAGCCCTGATGTCTACA +
Preference number: 6 (lower is better)
Translates to: PLSTGVGRLALL*PQLSMKALMST
Trigger: TGTAGACATCAGGGCTTTCATCGAGAGCTGCGGCCACAGGAGTGCCAGCCTCCCTACTCCTGTGGACAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp TGGCCGCAGCTCTCGATGAAAGCCCTGATGTCTACATaGGCCGTGGTGGGCGGTACGATGACAGACTGCTCT +
Preference number: 6 (lower is better)
Translates to: WPQLSMKALMST*AVVGGTMTDCS
Trigger: AGAGCAGTCTGTCATCGTACCGCCCACCACGGCCAATGTAGACATCAGGGCTTTCATCGAGAGCTGCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp GCACTCCTGTGGCCGCAGCTCTCGATGAAAGCCCTGATGTCTACATaGGCCGTGGTGGGCGGTACGATGACAGACTGCTCTTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: ALLWPQLSMKALMST*AVVGGTMTDCSSFS
Trigger: AGAGAAAGAAGAGCAGTCTGTCATCGTACCGCCCACCACGGCCAATGTAGACATCAGGGCTTTCATCGAGAGCTGCGGCCACAGGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp GAAGTTAAGAAGCTGCTGTCCGAGAAGGGCCCATGGAGCTCCTGTTaGGGTTCCTGGCTTTGGTCCTGCCCCTGCTCCAGCATGTACTGT +
Preference number: 6 (lower is better)
Translates to: EVKKLLSEKGPWSSC*GSWLWSCPCSSMYC
Trigger: ACAGTACATGCTGGAGCAGGGGCAGGACCAAAGCCAGGAACCCAAACAGGAGCTCCATGGGCCCTTCTCGGACAGCAGCTTCTTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp ACCCGGCCCTTCTTAGCACTGAGGCTGTTCCTCTCAGGCTTCACCTaGGCCTCAGGGGACAGCTGTGTCCTTTCAAGCTTACTGGCAATG +
Preference number: 6 (lower is better)
Translates to: TRPFLALRLFLSGFT*ASGDSCVLSSLLAM
Trigger: CATTGCCAGTAAGCTTGAAAGGACACAGCTGTCCCCTGAGGCCAAGGTGAAGCCTGAGAGGAACAGCCTCAGTGCTAAGAAGGGCCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp CTCGTGGCCACCATCCTCCACCTCTCTTGGCATCACTaGACTCAGTGCTACCTTCTGTTCAGCCTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: LVATILHLSWHH*TQCYLLFSLPL
Trigger: GAGAGGGAGGCTGAACAGAAGGTAGCACTGAGTTCAGTGATGCCAAGAGAGGTGGAGGATGGTGGCCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp GGACTGCTGTCCTCTGGCTCGTCTTCACTGACTACCTaGAGAGGCACCTCATCGTCTGAGCTGAGACTGTGT +
Preference number: 6 (lower is better)
Translates to: GLLSSGSSSLTT*RGTSSSELRLC
Trigger: ACACAGTCTCAGCTCAGACGATGAGGTGCCTCTGCAGGTAGTCAGTGAAGACGAGCCAGAGGACAGCAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp ATTTGGGGTACCAGGCCAGCTGTGAAATGGCGCTCGTaGCCACCATCCTCCACCTCTCTTGGCATCACTGAA +
Preference number: 6 (lower is better)
Translates to: IWGTRPAVKWRS*PPSSTSLGITE
Trigger: TTCAGTGATGCCAAGAGAGGTGGAGGATGGTGGCCACGAGCGCCATTTCACAGCTGGCCTGGTACCCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp ACCTTCTGTTCAGCCTCCCTCTCAGTGAGCGTGGTCTaGTCAAGGGTTCTGCTGAGAGCTCCATGTGACTCA +
Preference number: 6 (lower is better)
Translates to: TFCSASLSVSVV*SRVLLRAPCDS
Trigger: TGAGTCACATGGAGCTCTCAGCAGAACCCTTGAGCAGACCACGCTCACTGAGAGGGAGGCTGAACAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp CATTTTGCCCAATGCTTGAGAAAGCAGGTTGGCCTTTaGAGTCCTCCACGGAACCAGTGTAGCCAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: HFAQCLRKQVGL*SPPRNQCSQGG
Trigger: CCCTCCCTGGCTACACTGGTTCCGTGGAGGACTCCAAAGGCCAACCTGCTTTCTCAAGCATTGGGCAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp TCAGCTTACTCAGAGCATGAGCCACCCATCCGTGCCTaGACTGTTCACACTGACGGTGGTTTATCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SAYSEHEPPIRA*TVHTDGGLSSQ
Trigger: CTGGGAAGATAAACCACCGTCAGTGTGAACAGTGCAGGCACGGATGGGTGGCTCATGCTCTGAGTAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp AGATCTTTGTCCCTGTTGTTTCTGTTCATTGGCATGTaGAGGCGAGGGTTGGGGTTGGCGCTGTGTCGGTTC +
Preference number: 6 (lower is better)
Translates to: RSLSLLFLFIGM*RRGLGLALCRF
Trigger: GAACCGACACAGCGCCAACCCCAACCCTCGCCTGCACATGCCAATGAACAGAAACAACAGGGACAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp AGCATCGAATGGCATGTCTGTGGAAACCAGCTGTTCTaGGATCGAAGAGGACAACAGAGGGAGGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: SIEWHVCGNQLF*DRRGQQREGRQ
Trigger: CTGCCTTCCCTCCCTCTGTTGTCCTCTTCGATCCCAGAACAGCTGGTTTCCACAGACATGCCATTCGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp AGAGGGTATTCATCTTCCCCAGAGACAAGGCTCTGTCCTTCACAGTaGCCATCACTGTCCTCCATAAGGGCAGTGCCTTCCTCACTCACG +
Preference number: 6 (lower is better)
Translates to: RGYSSSPETRLCPSQ*PSLSSIRAVPSSLT
Trigger: CGTGAGTGAGGAAGGCACTGCCCTTATGGAGGACAGTGATGGCAACTGTGAAGGACAGAGCCTTGTCTCTGGGGAAGATGAATACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp CCTTCCTCACTCACGCCATCAGAGTCCCAGGAGGAATaGCTGCTGCTCTCTGACTTCATACTTGAGGTAGTG +
Preference number: 6 (lower is better)
Translates to: PSSLTPSESQEE*LLLSDFILEVV
Trigger: CACTACCTCAAGTATGAAGTCAGAGAGCAGCAGTCATTCCTCCTGGGACTCTGATGGCGTGAGTGAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp CACTGTGAAACCTGGGCGCTTGTAGGTCTCAGAGCTTaGCAGGTTCAGGCTATTCCTGAGATCTTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: HCETWALVGLRA*QVQAIPEIFVP
Trigger: AGGGACAAAGATCTCAGGAATAGCCTGAACCTGGCAAGCTCTGAGACCTACAAGCGCCCAGGTTTCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp GCCAGAGTTGTAGCTCTCCAGGCTGGCACTGTGAACTaGAGATATTGGGTAAACCAGACTGCCCATGCCACT +
Preference number: 6 (lower is better)
Translates to: ARVVALQAGTVN*RYWVNQTAHAT
Trigger: AGTGGCATGGGCAGTCTGGTTTACCCAATATCTCAAGTTCACAGTGCCAGCCTGGAGAGCTACAACTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp GGAGGCAGAGGGTTGAAGAACTGGAAAGGCAACATGAACGTCATGTaGCTTATAAGGTTCTCAAAGGGGTGCATGCCGCCAGGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: GGRGLKNWKGNMNVM*LIRFSKGCMPPGLP
Trigger: AGGAAGCCCTGGCGGCATGCACCCCTTTGAGAACCTTATAAGCAACATGACGTTCATGTTGCCTTTCCAGTTCTTCAACCCTCTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp ATTGGCCGTGGTGGGCGGTACGATGACAGACTGCTCTTCTTTCTCTaGGATTGCCATGAGTTCAACTATGGACTTGGTCTCTCCAAAGCG +
Preference number: 6 (lower is better)
Translates to: IGRGGRYDDRLLFFL*DCHEFNYGLGLSKA
Trigger: CGCTTTGGAGAGACCAAGTCCATAGTTGAACTCATGGCAATCCAAGAGAAAGAAGAGCAGTCTGTCATCGTACCGCCCACCACGGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp TTGTGGCGTGAAAGCCACATCCTGATAGGCCTCCTTGGCCACATCTaGCAGAAGGTAAGCTGCACGAAAATGGTCCTCACTAGTCTCCAA +
Preference number: 6 (lower is better)
Translates to: LWRESHILIGLLGHI*QKVSCTKMVLTSLQ
Trigger: TTGGAGACTAGTGAGGACCATTTTCGTGCAGCTTACCTTCTGCAAGATGTGGCCAAGGAGGCCTATCAGGATGTGGCTTTCACGCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp GTCTTCACTGACTACCTGCAGAGGCACCTCATCGTCTaGGCTGAGACTGTGTCTCTTCTCCTCAGCTATTTC +
Preference number: 6 (lower is better)
Translates to: VFTDYLQRHLIV*AETVSLLLSYF
Trigger: GAAATAGCTGAGGAGAAGAGACACAGTCTCAGCTCAGACGATGAGGTGCCTCTGCAGGTAGTCAGTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp CAGTCCAGGGCATGGAGGATCTGTAGAACCTCATCTTaGTTCAGCACACTGAAGAGCCGGTCCAATAGGATT +
Preference number: 6 (lower is better)
Translates to: QSRAWRICRTSS*FSTLKSRSNRI
Trigger: AATCCTATTGGACCGGCTCTTCAGTGTGCTGAAGCAAGATGAGGTTCTACAGATCCTCCATGCCCTGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp ACTATGGACTTGGTCTCTCCAAAGCGAAGGAACTGCTaGAAGGTAGCCACTTCCTCCTCACTGGTCATGATG +
Preference number: 6 (lower is better)
Translates to: TMDLVSPKRRNC*KVATSSSLVMM
Trigger: CATCATGACCAGTGAGGAGGAAGTGGCTACCTTGCAGCAGTTCCTTCGCTTTGGAGAGACCAAGTCCATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp CACGCGTGTGTCTCTCGGGCGTGTGTGTTCTTCTCATaGGTCTTCATGCTGCAAGCGTTTTTAAAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: HACVSRACVFFS*VFMLQAFLKVF
Trigger: GAAGACCTTTAAAAACGCTTGCAGCATGAAGACGCATGAGAAGAACACACACGCCCGAGAGACACACGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp GGACTTGCGGGATTTCTTCTTGGGAAGAGCATCGAATaGCATGTCTGTGGAAACCAGCTGTTCTGGGATCGA +
Preference number: 6 (lower is better)
Translates to: GLAGFLLGKSIE*HVCGNQLFWDR
Trigger: TCGATCCCAGAACAGCTGGTTTCCACAGACATGCCATTCGATGCTCTTCCCAAGAAGAAATCCCGCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp GCACTGTTCACACTGACGGTGGTTTATCTTCCCAGGTTTGAAACATaGGCAACTGCAGTTCAGAGTACAGCCGATAGCCTCAGCCATCCT +
Preference number: 6 (lower is better)
Translates to: ALFTLTVVYLPRFET*ATAVQSTADSLSHP
Trigger: AGGATGGCTGAGGCTATCGGCTGTACTCTGAACTGCAGTTGCCAATGTTTCAAACCTGGGAAGATAAACCACCGTCAGTGTGAACAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp CATGCCACTTGTTCCCTTGAAGATGACAGATGTCTGTaGTGCTTGTGGCGTGAAAGCCACATCCTGATAGGC +
Preference number: 6 (lower is better)
Translates to: HATCSLEDDRCL*CLWRESHILIG
Trigger: GCCTATCAGGATGTGGCTTTCACGCCACAAGCATCACAGACATCTGTCATCTTCAAGGGAACAAGTGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp GGAGATGAAGCCAGGCTCTTGTGCAGGTTGGGATTCTaGCTGTGTCTGTTTCTACTGCGAACAGATGAGAAC +
Preference number: 6 (lower is better)
Translates to: GDEARLLCRLGF*LCLFLLRTDEN
Trigger: GTTCTCATCTGTTCGCAGTAGAAACAGACACAGTCAGAATCCCAACCTGCACAAGAGCCTGGCTTCATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp TCTACATTGGCCGTGGTGGGCGGTACGATGACAGACTaGTCTTCTTTCTCTTGGATTGCCATGAGTTCAACT +
Preference number: 6 (lower is better)
Translates to: STLAVVGGTMTD*SSFSWIAMSST
Trigger: AGTTGAACTCATGGCAATCCAAGAGAAAGAAGAGCAGTCTGTCATCGTACCGCCCACCACGGCCAATGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp ATGAACGTCATGTTGCTTATAAGGTTCTCAAAGGGGTaGATGCCGCCAGGGCTTCCTTTGTCCACAGGAGTA +
Preference number: 6 (lower is better)
Translates to: MNVMLLIRFSKG*MPPGLPLSTGV
Trigger: TACTCCTGTGGACAAAGGAAGCCCTGGCGGCATGCACCCCTTTGAGAACCTTATAAGCAACATGACGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp CAGGGGACAGCTGTGTCCTTTCAAGCTTACTGGCAATaGTATATGAGCTGGAGTCGCTTAAGTGAGCACTGT +
Preference number: 6 (lower is better)
Translates to: QGTAVSFQAYWQ*YMSWSRLSEHC
Trigger: ACAGTGCTCACTTAAGCGACTCCAGCTCATATAGCATTGCCAGTAAGCTTGAAAGGACACAGCTGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp ATAGGCCTCCTTGGCCACATCTTGCAGAAGGTAAGCTaGACGAAAATGGTCCTCACTAGTCTCCAATGCTTC +
Preference number: 6 (lower is better)
Translates to: IGLLGHILQKVS*TKMVLTSLQCF
Trigger: GAAGCATTGGAGACTAGTGAGGACCATTTTCGTGCAGCTTACCTTCTGCAAGATGTGGCCAAGGAGGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp CTGAGAGCTCCATGTGACTCAATCACAGATTCAAGATaGCAGGCTCTTTCTCCTTGTGGAAGAGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: LRAPCDSITDSR*QALSPCGRGSS
Trigger: AGAGGAGCCTCTTCCACAAGGAGAAAGAGCCTGCCATCTTGAATCTGTGATTGAGTCACATGGAGCTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp GGTGGGCGGTACGATGACAGACTGCTCTTCTTTCTCTaGGATTGCCATGAGTTCAACTATGGACTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: GGRYDDRLLFFL*DCHEFNYGLGL
Trigger: GAGACCAAGTCCATAGTTGAACTCATGGCAATCCAAGAGAAAGAAGAGCAGTCTGTCATCGTACCGCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp GACTGCTCTTCTTTCTCTTGGATTGCCATGAGTTCAACTATGGACTaGGTCTCTCCAAAGCGAAGGAACTGCTGCAAGGTAGCCACTTCC +
Preference number: 6 (lower is better)
Translates to: DCSSFSWIAMSSTMD*VSPKRRNCCKVATS
Trigger: GGAAGTGGCTACCTTGCAGCAGTTCCTTCGCTTTGGAGAGACCAAGTCCATAGTTGAACTCATGGCAATCCAAGAGAAAGAAGAGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp ACACCATGTTACACCCTTCGATCGTGCACTTGTGCTTaGTCTTTAGGTGGACGGCGTTGTAGTGGATCTTCA +
Preference number: 6 (lower is better)
Translates to: TPCYTLRSCTCA*SLGGRRCSGSS
Trigger: TGAAGATCCACTACAACGCCGTCCACCTAAAGATCAAGCACAAGTGCACGATCGAAGGGTGTAACATGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS GCA 72 bp TCTTCCTTCTGCCTCACTAGTGCATGCTCACCCAGGTaGTCCAGCTCTTTAGACTCTTCCAGAAAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: SSFCLTSACSPR*SSSLDSSRKGK
Trigger: TTTTCCTTTTCTGGAAGAGTCTAAAGAGCTGGAGCACCTGGGTGAGCATGCACTAGTGAGGCAGAAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp CTAGTCTCCAATGCTTCTTCATTCAGTACTTTCTGGTaGAGGCTTAGGTTCGAGCTGTGTCTGTCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LVSNASSFSTFW*RLRFELCLSLL
Trigger: GAGCAGAGACAGACACAGCTCGAACCTAAGCCTCCACCAGAAAGTACTGAATGAAGAAGCATTGGAGACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp GGGTTGAAGAACTGGAAAGGCAACATGAACGTCATGTaGCTTATAAGGTTCTCAAAGGGGTGCATGCCGCCA +
Preference number: 6 (lower is better)
Translates to: GLKNWKGNMNVM*LIRFSKGCMPP
Trigger: TGGCGGCATGCACCCCTTTGAGAACCTTATAAGCAACATGACGTTCATGTTGCCTTTCCAGTTCTTCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp TCAGAGCTTGCCAGGTTCAGGCTATTCCTGAGATCTTaGTCCCTGTTGTTTCTGTTCATTGGCATGTGCAGG +
Preference number: 6 (lower is better)
Translates to: SELARFRLFLRS*SLLFLFIGMCR
Trigger: CCTGCACATGCCAATGAACAGAAACAACAGGGACAAAGATCTCAGGAATAGCCTGAACCTGGCAAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS TCA 72 bp GTTTCTGGACAGTTGAGGCACTGTTCTTTTTCAACCTaGAATGGGGTGGAAGTTAAGAAGCTGCTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: VSGQLRHCSFST*NGVEVKKLLSE
Trigger: CTCGGACAGCAGCTTCTTAACTTCCACCCCATTTCAGGTTGAAAAAGAACAGTGCCTCAACTGTCCAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp AGCATGAGGCTGCTAATATCGAACACCACATTGGACTaGACAATTTCCACTTGGCTTGTTGGATACACAGGG +
Preference number: 6 (lower is better)
Translates to: SMRLLISNTTLD*TISTWLVGYTG
Trigger: CCCTGTGTATCCAACAAGCCAAGTGGAAATTGTCCAGTCCAATGTGGTGTTCGATATTAGCAGCCTCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp GTGTCCTTTCAAGCTTACTGGCAATGCTATATGAGCTaGAGTCGCTTAAGTGAGCACTGTCTTCCTTTTGGG +
Preference number: 6 (lower is better)
Translates to: VSFQAYWQCYMS*SRLSEHCLPFG
Trigger: CCCAAAAGGAAGACAGTGCTCACTTAAGCGACTCCAGCTCATATAGCATTGCCAGTAAGCTTGAAAGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp ATTTCTTCTTGGGAAGAGCATCGAATGGCATGTCTGTaGAAACCAGCTGTTCTGGGATCGAAGAGGACAACA +
Preference number: 6 (lower is better)
Translates to: ISSWEEHRMACL*KPAVLGSKRTT
Trigger: TGTTGTCCTCTTCGATCCCAGAACAGCTGGTTTCCACAGACATGCCATTCGATGCTCTTCCCAAGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp TTCTTCTCATGCGTCTTCATGCTGCAAGCGTTTTTAAAGGTCTTCTaGCAGATGTCACACTGGAAGCAAGCTTCTTCCTTCTGCCTCACT +
Preference number: 6 (lower is better)
Translates to: FFSCVFMLQAFLKVF*QMSHWKQASSFCLT
Trigger: AGTGAGGCAGAAGGAAGAAGCTTGCTTCCAGTGTGACATCTGCAAGAAGACCTTTAAAAACGCTTGCAGCATGAAGACGCATGAGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CCA 72 bp CAAGCGTTTTTAAAGGTCTTCTTGCAGATGTCACACTaGAAGCAAGCTTCTTCCTTCTGCCTCACTAGTGCA +
Preference number: 6 (lower is better)
Translates to: QAFLKVFLQMSH*KQASSFCLTSA
Trigger: TGCACTAGTGAGGCAGAAGGAAGAAGCTTGCTTCCAGTGTGACATCTGCAAGAAGACCTTTAAAAACGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp TCTTTCTCTTGGATTGCCATGAGTTCAACTATGGACTaGGTCTCTCCAAAGCGAAGGAACTGCTGCAAGGTA +
Preference number: 6 (lower is better)
Translates to: SFSWIAMSSTMD*VSPKRRNCCKV
Trigger: TACCTTGCAGCAGTTCCTTCGCTTTGGAGAGACCAAGTCCATAGTTGAACTCATGGCAATCCAAGAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp TGCGTCTTCATGCTGCAAGCGTTTTTAAAGGTCTTCTaGCAGATGTCACACTGGAAGCAAGCTTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: CVFMLQAFLKVF*QMSHWKQASSF
Trigger: GAAGGAAGAAGCTTGCTTCCAGTGTGACATCTGCAAGAAGACCTTTAAAAACGCTTGCAGCATGAAGACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp GCTATTTCCACAGCTTCTTTCTCTATTTTGATAGGCATACTGGACTaGCGGGATTTCTTCTTGGGAAGAGCATCGAATGGCATGTCTGTG +
Preference number: 6 (lower is better)
Translates to: AISTASFSILIGILD*RDFFLGRASNGMSV
Trigger: CACAGACATGCCATTCGATGCTCTTCCCAAGAAGAAATCCCGCAAGTCCAGTATGCCTATCAAAATAGAGAAAGAAGCTGTGGAAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 90 bp CTGTGTCTCTTCTCCTCAGCTATTTCCACAGCTTCTTTCTCTATTTaGATAGGCATACTGGACTTGCGGGATTTCTTCTTGGGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: LCLFSSAISTASFSI*IGILDLRDFFLGRA
Trigger: TGCTCTTCCCAAGAAGAAATCCCGCAAGTCCAGTATGCCTATCAAAATAGAGAAAGAAGCTGTGGAAATAGCTGAGGAGAAGAGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10
CDS CAA 72 bp ACAGCTTCTTTCTCTATTTTGATAGGCATACTGGACTaGCGGGATTTCTTCTTGGGAAGAGCATCGAATGGC +
Preference number: 6 (lower is better)
Translates to: TASFSILIGILD*RDFFLGRASNG
Trigger: GCCATTCGATGCTCTTCCCAAGAAGAAATCCCGCAAGTCCAGTATGCCTATCAAAATAGAGAAAGAAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026096.10