Pregenerated sensors for BMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042742Ensembl transcript IDs: ENSMUST00000045235.8, ENSMUST00000203078.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTATAGCAATCTTCCAGCTCTTCATCATCATAGCGTGCCGGTTCTaGTGGGAGGAATCGGGAGTGATGATGAGCAATAAGCCGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SIAIFQLFIIIACRF*WEESGVMMSNKPFR Trigger: CCTGAACGGCTTATTGCTCATCATCACTCCCGATTCCTCCCATCAGAACCGGCACGCTATGATGATGAAGAGCTGGAAGATTGCTATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR TCA 90 bp | GGCTTTCTCCAGAATCGGAATCATAAGGAGCTTCGGGGAGCTCCGTaGAACCGTATGCGAGTTGTTCATCTTCTAGATCTGATCGGACAT | + |
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Preference number: 1 (lower is better) Translates to: GFLQNRNHKELRGAP*NRMRVVHLLDLIGH Trigger: ATGTCCGATCAGATCTAGAAGATGAACAACTCGCATACGGTTTCACGGAGCTCCCCGAAGCTCCTTATGATTCCGATTCTGGAGAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR TCA 90 bp | CACGTGCAACCCTTTCACAAAGGTGTTCCAGGCCAGTGTTGGGTATaGTACATTGCTTCTTGCTTAAACAGAACATTCTGTAAATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: HVQPFHKGVPGQCWV*YIASCLNRTFCKCS Trigger: ACTGCATTTACAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGAACACCTTTGTGAAAGGGTTGCACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR CCA 90 bp | CTCCTCTTCTACACTGTTGAAATCTTGAGGAATATACAACATCCCTaGATAGTTCCTGCTAACCAAGTCACTTGTGGTTTTAAGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: LLFYTVEILRNIQHP*IVPANQVTCGFKGG Trigger: ACCTCCCTTAAAACCACAAGTGACTTGGTTAGCAGGAACTATCCAGGGATGTTGTATATTCCTCAAGATTTCAACAGTGTAGAAGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR GCA 90 bp | ACTACACCAACCTATGTGAAATATTCAACTTGTGAGTCATCAAAGTaGAATCTACAGCTTTCTACACATCTTGAGGTTCCTCATGACAAG | + |
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Preference number: 1 (lower is better) Translates to: TTPTYVKYSTCESSK*NLQLSTHLEVPHDK Trigger: CTTGTCATGAGGAACCTCAAGATGTGTAGAAAGCTGTAGATTGCACTTTGATGACTCACAAGTTGAATATTTCACATAGGTTGGTGTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGCAAGCTGGAGTGGCTaGTGCAGCTGCAGGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VQHRPKGQVRTLSELVTAASWSG*CSCRFR Trigger: CCTGAACCTGCAGCTGCAGCAGCCACTCCAGCTTGC...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCAGTGGCTGCTGCAGCTaGAGGTTCAGGAAGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: PSQSWSQQNITVYTCNPFSGCCS*RFRKSH Trigger: GTGTGACTTCCTGAACCTGCAGCTGCAGCAGCCACT...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAACTTTCACATGGAACTaGCCTGTGGAATATGTATTG | + |
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Preference number: 2 (lower is better) Translates to: VQHRPKGQVRTLSELVTATFTWN*PVEYVL Trigger: CAATACATATTCCACAGGCCAGTTCCATGTGAAAGT...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCCTAACCCTGGGCTTCTaGACCCAACTTCTCTCACGT | + |
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Preference number: 2 (lower is better) Translates to: PSQSWSQQNITVYTCNPFLTLGF*TQLLSR Trigger: ACGTGAGAGAAGTTGGGTTCAGAAGCCCAGGGTTAG...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCATTTGGCAATGGTGTTTaGTGTACTGTGTTCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: VQHRPKGQVRTLSELVTAFGNGV*CTVFIR Trigger: TCTAATGAACACAGTACAGCAAACACCATTGCCAAA...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCATTTAGTTTAGGAATCTaGAATGGAAGGGCTTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VQHRPKGQVRTLSELVTAFSLGI*NGRAFC Trigger: GCAAAAAGCCCTTCCATTCCAGATTCCTAAACTAAA...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCACCTGTAGTGCCTAAATaGAAAGAAACTCTAGTAATG | + |
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Preference number: 2 (lower is better) Translates to: VQHRPKGQVRTLSELVTAPVVPK*KETLVM Trigger: CATTACTAGAGTTTCTTTCCATTTAGGCACTACAGG...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGCAGGCTGGCTGGCCTTaGAGTCATAGCTCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SRPVLGMIHCFLLKQNILQAGWP*SHSSAS Trigger: GGAGGCAGAGCTATGACTTCAAGGCCAGCCAGCCTG...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCATATATATTTGCCAAGTaGTTTGTCACAGTGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: VQHRPKGQVRTLSELVTAYIFAK*FVTVME Trigger: TTCCATCACTGTGACAAAGCACTTGGCAAATATATA...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCGCCCAACCAACCACATaGTTCTCATCTGGCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PSQSWSQQNITVYTCNPFAQPTT*FSSGFF Trigger: GAAAAAGCCAGATGAGAATCATGTGGTTGGTTGGGC...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGATAGCGTGCCGGTTCTaGTGGGAGGAATCGGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SRPVLGMIHCFLLKQNILIACRF*WEESGV Trigger: CACTCCCGATTCCTCCCATCAGAACCGGCACGCTAT...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGGGCTGTCCCAGAACTTaGTTTGAAGACCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SRPVLGMIHCFLLKQNILGCPRT*FEDQAG Trigger: GCCAGCCTGGTCTTCAAAGCAAGTTCTGGGACAGCC...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACCAGAGTCACTCTGCATaGAACTTTAAGCTTCCTATA | + |
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Preference number: 2 (lower is better) Translates to: GQVRTLSELVTAEYNRLHQSHSA*NFKLPI Trigger: TATAGGAAGCTTAAAGTTTCATGCAGAGTGACTCTG...GTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAGAACTTGCTTTGAAGACCAGGCTGGCTGGCCTTGAAGTCATAGCTCTGGTGTATTGTTTCCTTTaGTCTGAGGATTGTAATGAG | + |
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Preference number: 2 (lower is better) Translates to: VPELALKTRLAGLEVIALVYCFL*SEDCNE Trigger: CTCATTACAATCCTCAGAGCAAAGGAAACAATACAC...CAGAGCTATGACTTCAAGGCCAGCCAGCCTGGTCTTCAAAGCAAGTTCTGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCATGGGTAAAAGCATTTaGCATGATAGCCTGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: PSQSWSQQNITVYTCNPFMGKSI*HDSLKT Trigger: GGTCTTCAGGCTATCATGGCAAATGCTTTTACCCAT...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGGCTTTCTCCAGAATCGGAATCATAAGGAGCTTCGGGGAGCTCCGTGAAATACTACTTTGGCAATaGTGTTTGCTGTACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GLAFSRIGIIRSFGELREILLWQ*CLLYCV Trigger: AACACAGTACAGCAAACACCATTGCCAAAGTAGTAT...TTCACGGAGCTCCCCGAAGCTCCTTATGATTCCGATTCTGGAGAAAGCCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTAAGGACTAACAGCTCATaGGCTTTCTTGCAGCAAATC | + |
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Preference number: 2 (lower is better) Translates to: KGQVRTLSELVTAEYNRLRTNSS*AFLQQI Trigger: GATTTGCTGCAAGAAAGCCCATGAGCTGTTAGTCCT...TAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCCAGAGTCACTCTGCATaGAACTTTAAGCTTCCTATA | + |
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Preference number: 2 (lower is better) Translates to: PSQSWSQQNITVYTCNPFQSHSA*NFKLPI Trigger: TATAGGAAGCTTAAAGTTTCATGCAGAGTGACTCTG...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTGCTGGGACTAACGGCTTAAGCCCCCATCACTTGGCCCAATTATCATGTTGTGAGTCATCAAAGTaGAATCTACAGCTTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: PSAGTNGLSPHHLAQLSCCESSK*NLQLST Trigger: TGTAGAAAGCTGTAGATTGCACTTTGATGACTCACA...ACATGATAATTGGGCCAAGTGATGGGGGCTTAAGCCGTTAGTCCCAGCACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAGCATCTATAGCATCTTGTGCAAGCTGGAGTGGCTGCTGCAGCTGCAGGTGTGAGTCATCAAAGTaGAATCTACAGCTTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: RKASIASCASWSGCCSCRCESSK*NLQLST Trigger: TGTAGAAAGCTGTAGATTGCACTTTGATGACTCACA...CCTGCAGCTGCAGCAGCCACTCCAGCTTGCACAAGATGCTATAGATGCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGTGCTGGGACTAACGGCTTAAGCCCCCATCACTTGGCCCAATTATCATGTTTTGGCAATGGTGTTTaGTGTACTGTGTTCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: PSAGTNGLSPHHLAQLSCFGNGV*CTVFIR Trigger: TCTAATGAACACAGTACAGCAAACACCATTGCCAAA...ACATGATAATTGGGCCAAGTGATGGGGGCTTAAGCCGTTAGTCCCAGCACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAGAACTTGCTTTGAAGACCAGGCTGGCTGGCCTTGAAGTCATAGCTCTGTCAACCCATAATGACTaGTTATGTTTCAACACTTTC | + |
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Preference number: 2 (lower is better) Translates to: VPELALKTRLAGLEVIALSTHND*LCFNTF Trigger: GAAAGTGTTGAAACATAAGCAGTCATTATGGGTTGA...CAGAGCTATGACTTCAAGGCCAGCCAGCCTGGTCTTCAAAGCAAGTTCTGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACAGTCCTAAGCAATACTaGTACACAGACATCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: GQVRTLSELVTAEYNRLHSPKQY*YTDIFV Trigger: TACAAAGATGTCTGTGTAGCAGTATTGCTTAGGACT...GTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTGCTGGGACTAACGGCTTAAGCCCCCATCACTTGGCCCAATTATCATGTATACTACTTTGGCAATaGTGTTTGCTGTACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PSAGTNGLSPHHLAQLSCILLWQ*CLLYCV Trigger: AACACAGTACAGCAAACACCATTGCCAAAGTAGTAT...ACATGATAATTGGGCCAAGTGATGGGGGCTTAAGCCGTTAGTCCCAGCACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACATGGAACTGGCCTGTaGAATATGTATTGGTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: KGQVRTLSELVTAEYNRLHGTGL*NMYWCK Trigger: CTTACACCAATACATATTCCACAGGCCAGTTCCATG...TAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGAGACATGGTTTTCTTTaGGTAGCCTTGGCTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SRPVLGMIHCFLLKQNILRHGFL*VALAVP Trigger: TGGGACAGCCAAGGCTACTCAAAGAAAACCATGTCT...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCCCTCTTCTACACTGTTaGAATCTTGAGGAATATACA | + |
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Preference number: 2 (lower is better) Translates to: PSQSWSQQNITVYTCNPFPLLHC*NLEEYT Trigger: TGTATATTCCTCAAGATTTCAACAGTGTAGAAGAGG...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACATAGAAATACTACTTTaGCAATGGTGTTTGCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: GQVRTLSELVTAEYNRLHIEILL*QWCLLY Trigger: GTACAGCAAACACCATTGCCAAAGTAGTATTTCTAT...GTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTAACATATGACAATTGCTaGCTGACAAGACAATGTGGA | + |
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Preference number: 2 (lower is better) Translates to: KGQVRTLSELVTAEYNRLTYDNC*LTRQCG Trigger: TCCACATTGTCTTGTCAGCCAGCAATTGTCATATGT...TAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTAAGGCATTTATCAATGTaGAAAGGGAAATTTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: KGQVRTLSELVTAEYNRLRHLSM*KGKFPT Trigger: TGTGGGAAATTTCCCTTTCCACATTGATAAATGCCT...TAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTATTGGGTATGATACATTaGTTCTTGCTTAAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KGQVRTLSELVTAEYNRLLGMIH*FLLKQN Trigger: GTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAA...TAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCAATAAGCCGTTCAGGACTAACAGCTCATGGGCTTTCTTGCAGCAAATCATGACATATGACAATTaGTGGCTGACAAGACAATGT | + |
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Preference number: 2 (lower is better) Translates to: MSNKPFRTNSSWAFLQQIMTYDN*WLTRQC Trigger: ACATTGTCTTGTCAGCCAGCAATTGTCATATGTCAT...GATTTGCTGCAAGAAAGCCCATGAGCTGTTAGTCCTGAACGGCTTATTGCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCAATAAGCCGTTCAGGACTAACAGCTCATGGGCTTTCTTGCAGCAAATCATAGGATTTCTCAGCTaGTTCAGAAAAGCATCTATA | + |
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Preference number: 2 (lower is better) Translates to: MSNKPFRTNSSWAFLQQIIGFLS*FRKASI Trigger: TATAGATGCTTTTCTGAAGCAGCTGAGAAATCCTAT...GATTTGCTGCAAGAAAGCCCATGAGCTGTTAGTCCTGAACGGCTTATTGCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | CACACATACAACACACACATACATACACGCTCATACAACATTAACCATGAAATCAGACAAGGTCTCCAGTaGTTCAGGGTAGCCTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: HTYNTHIHTRSYNINHEIRQGLQ*FRVASN Trigger: ATTTGAGGCTACCCTGAACCACTGGAGACCTTGTCT...GATTTCATGGTTAATGTTGTATGAGCGTGTATGTATGTGTGTGTTGTATGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGAATGTCAAGAATATGTaGACCTTGATCCGTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: SRPVLGMIHCFLLKQNILNVKNM*TLIRKL Trigger: AAGCTTACGGATCAAGGTGCACATATTCTTGACATT...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGTTTAGTTTAGGAATCTaGAATGGAAGGGCTTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SRPVLGMIHCFLLKQNILFSLGI*NGRAFC Trigger: GCAAAAAGCCCTTCCATTCCAGATTCCTAAACTAAA...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR GCA 90 bp | CACACATACAACACACACATACATACACGCTCATACAACATTAACCATGAAATCATGACATATGACAATTaGTGGCTGACAAGACAATGT | + |
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Preference number: 2 (lower is better) Translates to: HTYNTHIHTRSYNINHEIMTYDN*WLTRQC Trigger: ACATTGTCTTGTCAGCCAGCAATTGTCATATGTCAT...GATTTCATGGTTAATGTTGTATGAGCGTGTATGTATGTGTGTGTTGTATGTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATAACATATGACAATTGCTaGCTGACAAGACAATGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSQVNILNTKTCISKNVITYDNC*LTRQCG Trigger: TCCACATTGTCTTGTCAGCCAGCAATTGTCATATGT...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATAAGGCATTTATCAATGTaGAAAGGGAAATTTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LSQVNILNTKTCISKNVIRHLSM*KGKFPT Trigger: TGTGGGAAATTTCCCTTTCCACATTGATAAATGCCT...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCATGGAATAGAGCTGGCTaGGCTTTCTCCAGAATCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VQHRPKGQVRTLSELVTAWNRAG*AFSRIG Trigger: TCCGATTCTGGAGAAAGCCAAGCCAGCTCTATTCCA...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR GCA 72 bp | ATAGCATCTTGTGCAAGCTGGAGTGGCTGCTGCAGCTaGAGGTTCAGGAAGTCACACTTATACACACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: IASCASWSGCCS*RFRKSHLYTLC Trigger: ACAGAGTGTGTATAAGTGTGACTTCCTGAACCTGCAGCTGCAGCAGCCACTCCAGCTTGCACAAGATGCTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR GCA 72 bp | GCATCTATAGCATCTTGTGCAAGCTGGAGTGGCTGCTaGAGCTGCAGGTTCAGGAAGTCACACTTATACACA | + |
|
Preference number: 3 (lower is better) Translates to: ASIASCASWSGC*SCRFRKSHLYT Trigger: TGTGTATAAGTGTGACTTCCTGAACCTGCAGCTGCAGCAGCCACTCCAGCTTGCACAAGATGCTATAGATGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR TCA 72 bp | CAGAATCGGAATCATAAGGAGCTTCGGGGAGCTCCGTaGAACCGTATGCGAGTTGTTCATCTTCTAGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: QNRNHKELRGAP*NRMRVVHLLDL Trigger: CAGATCTAGAAGATGAACAACTCGCATACGGTTTCACGGAGCTCCCCGAAGCTCCTTATGATTCCGATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR GCA 72 bp | CAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTaGAACCCTTTCACAAAGGTGTTCCAGGCCAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QSWSQQNITVYT*NPFTKVFQASV Trigger: AACACTGGCCTGGAACACCTTTGTGAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| 3UTR TCA 72 bp | CCTCAAATCTTGAAGTCAAAGCTAACCCTGGGCTTCTaGACCCAACTTCTCTCACGTATTGGGATTGCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PQILKSKLTLGF*TQLLSRIGIAH Trigger: ATGCGCAATCCCAATACGTGAGAGAAGTTGGGTTCAGAAGCCCAGGGTTAGCTTTGACTTCAAGATTTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR GCA 72 bp | ATAAGCCGTTCAGGACTAACAGCTCATGGGCTTTCTTaGAGCAAATCCATCGCTGGTAGGGTGATGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ISRSGLTAHGLS*SKSIAGRVMEN Trigger: ATTTTCCATCACCCTACCAGCGATGGATTTGCTGCAAGAAAGCCCATGAGCTGTTAGTCCTGAACGGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR CCA 72 bp | ATCCTGATGAGCCCAACCAACCACATGATTCTCATCTaGCTTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ILMSPTNHMILI*LFPSFLPSFLP Trigger: AGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAAGCCAGATGAGAATCATGTGGTTGGTTGGGCTCATCAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGGAGACATGGTTTTCTTaGAGTAGCCTTGGCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRPVLGMIHCFLLKQNILETWFS*SSLGCP Trigger: GGGACAGCCAAGGCTACTCAAAGAAAACCATGTCTC...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCTACACTGTTGAAATCTaGAGGAATATACAACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSQSWSQQNITVYTCNPFYTVEI*RNIQHP Trigger: GGGATGTTGTATATTCCTCAAGATTTCAACAGTGTA...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACATAGAAATACTACTTaGGCAATGGTGTTTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KGQVRTLSELVTAEYNRLHRNTT*AMVFAV Trigger: TACAGCAAACACCATTGCCAAAGTAGTATTTCTATG...TAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| 3UTR TCA 72 bp | TACCTCCAGCCACTTTGTAACTATAGTAAAATCACATaGTCTGTTCACCATCCTGATGAGCCCAACCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: YLQPLCNYSKIT*SVHHPDEPNQP Trigger: TGGTTGGTTGGGCTCATCAGGATGGTGAACAGATCATGTGATTTTACTATAGTTACAAAGTGGCTGGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| 3UTR CCA 72 bp | TACACTGTTGAAATCTTGAGGAATATACAACATCCCTaGATAGTTCCTGCTAACCAAGTCACTTGTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: YTVEILRNIQHP*IVPANQVTCGF Trigger: AAAACCACAAGTGACTTGGTTAGCAGGAACTATCCAGGGATGTTGTATATTCCTCAAGATTTCAACAGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| 3UTR GCA 72 bp | ACCTATGTGAAATATTCAACTTGTGAGTCATCAAAGTaGAATCTACAGCTTTCTACACATCTTGAGGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TYVKYSTCESSK*NLQLSTHLEVP Trigger: AGGAACCTCAAGATGTGTAGAAAGCTGTAGATTGCACTTTGATGACTCACAAGTTGAATATTTCACATAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| 3UTR GCA 72 bp | ACTGGTTATTACTTATATACCTCAACCCATAATGACTaGTTATGTTTCAACACTTTCACATGGAACTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TGYYLYTSTHND*LCFNTFTWNWP Trigger: AGGCCAGTTCCATGTGAAAGTGTTGAAACATAAGCAGTCATTATGGGTTGAGGTATATAAGTAATAACCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATACGCCTCTTCAATCTTTaGTCTTCTTTTCTTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSQVNILNTKTCISKNVIRLFNL*SSFLLR Trigger: CCTCAAAAGAAAAGAAGACAAAAGATTGAAGAGGCG...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATACATAGAAATACTACTTaGGCAATGGTGTTTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSQVNILNTKTCISKNVIHRNTT*AMVFAV Trigger: TACAGCAAACACCATTGCCAAAGTAGTATTTCTATG...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR TCA 90 bp | GTGCAGCACCGCCCTAAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCATTGCGGAGCCGCCGATaGACGCTCTTCACCACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VQHRPKGQVRTLSELVTALRSRR*TLFTTP Trigger: CGGGGTGGTGAAGAGCGTTCATCGGCGGCTCCGCAA...TGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTTAGGGCGGTGCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGAACTTGCTTTGAAGACCAGGCTGGCTGGCCTTGAAGTCATAGCTCTGTCCAGCTTCCGCTCCTaGTCCCGGGGCTGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPELALKTRLAGLEVIALSSFRS*SRGCAA Trigger: CGCCGCGCAGCCCCGGGAGCAGGAGCGGAAGCTGGA...CAGAGCTATGACTTCAAGGCCAGCCAGCCTGGTCTTCAAAGCAAGTTCTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR TCA 90 bp | GGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACTTGCGGAGCCGCCGATaGACGCTCTTCACCACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQVRTLSELVTAEYNRLHLRSRR*TLFTTP Trigger: CGGGGTGGTGAAGAGCGTTCATCGGCGGCTCCGCAA...GTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGAACTTGCTTTGAAGACCAGGCTGGCTGGCCTTGAAGTCATAGCTCTGCCGGACAGCTTCTCCTaGTCCAGCTTCCGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPELALKTRLAGLEVIALPDSFS*SSFRSC Trigger: GCAGGAGCGGAAGCTGGAGCAGGAGAAGCTGTCCGG...CAGAGCTATGACTTCAAGGCCAGCCAGCCTGGTCTTCAAAGCAAGTTCTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGCATCTATAGCATCTTGTGCAAGCTGGAGTGGCTGCTGCAGCTGCAGGCCGGACAGCTTCTCCTaGTCCAGCTTCCGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKASIASCASWSGCCSCRPDSFS*SSFRSC Trigger: GCAGGAGCGGAAGCTGGAGCAGGAGAAGCTGTCCGG...CCTGCAGCTGCAGCAGCCACTCCAGCTTGCACAAGATGCTATAGATGCTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGTCCAGCTTCCGCTCCTaGTCCCGGGGCTGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRPVLGMIHCFLLKQNILSSFRS*SRGCAA Trigger: CGCCGCGCAGCCCCGGGAGCAGGAGCGGAAGCTGGA...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGAACTTGCTTTGAAGACCAGGCTGGCTGGCCTTGAAGTCATAGCTCTGAGCTGGAGTGGCTGCTaGAGCTGCAGGTTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPELALKTRLAGLEVIALSWSGC*SCRFRK Trigger: CTTCCTGAACCTGCAGCTGCAGCAGCCACTCCAGCT...CAGAGCTATGACTTCAAGGCCAGCCAGCCTGGTCTTCAAAGCAAGTTCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCCTTCGCGGTACTTCTTaGGGAGCCGCCGATGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PSQSWSQQNITVYTCNPFLRGTS*GAADER Trigger: GCGTTCATCGGCGGCTCCGCAAGAAGTACCGCGAAG...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGCTGGGACTAACGGCTTAAGCCCCCATCACTTGGCCCAATTATCATGTGCTCATGGGCTTTCTTaGAGCAAATCCATCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGTNGLSPHHLAQLSCAHGLS*SKSIAG Trigger: ACCAGCGATGGATTTGCTGCAAGAAAGCCCATGAGC...ACATGATAATTGGGCCAAGTGATGGGGGCTTAAGCCGTTAGTCCCAGCACTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACACCCTCACAAGTTTTTaGCCAGTGATTATCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVRTLSELVTAEYNRLHTLTSF*PVIICQ Trigger: CTGGCAGATAATCACTGGGCAAAAACTTGTGAGGGT...GTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACTGCCCAGTGATTATCTaGCAGATTTTTCATTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQVRTLSELVTAEYNRLHCPVII*QIFHCN Trigger: GTTGCAATGAAAAATCTGGCAGATAATCACTGGGCA...GTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGAACTTGCTTTGAAGACCAGGCTGGCTGGCCTTGAAGTCATAGCTCTGTTTGGAAGTACTCTCTaGATACACTACAACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: VPELALKTRLAGLEVIALFGSTL*IHYNTI Trigger: AATGGTGTTGTAGTGTATGCAGAGAGTACTTCCAAA...CAGAGCTATGACTTCAAGGCCAGCCAGCCTGGTCTTCAAAGCAAGTTCTGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR GCA 90 bp | CACACATACAACACACACATACATACACGCTCATACAACATTAACCATGAAATCGCAAGCTGGAGTGGCTaGTGCAGCTGCAGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTYNTHIHTRSYNINHEIASWSG*CSCRFR Trigger: CCTGAACCTGCAGCTGCAGCAGCCACTCCAGCTTGC...GATTTCATGGTTAATGTTGTATGAGCGTGTATGTATGTGTGTGTTGTATGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| 3UTR CAA 72 bp | CGTGCAACCCTTTCACAAAGGTGTTCCAGGCCAGTGTaGGGTATGATACATTGCTTCTTGCTTAAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RATLSQRCSRPV*GMIHCFLLKQN Trigger: GTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGAACACCTTTGTGAAAGGGTTGCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACGTGCAACCCTTTCTGCCAGATTTTTCATTaGAACAGCATATTCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSQSWSQQNITVYTCNPFCQIFH*NSIFAK Trigger: CTTTGCGAATATGCTGTTGCAATGAAAAATCTGGCA...GAAAGGGTTGCACGTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGACCCTCACAAGTTTTTaGCCAGTGATTATCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRPVLGMIHCFLLKQNILTLTSF*PVIICQ Trigger: CTGGCAGATAATCACTGGGCAAAAACTTGTGAGGGT...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTGCAATCTACAGCTTTCTACACATCTTGAGGTTCCTCATGACAAGGGTTACAACACCATTCAATaGGACCTTCACCCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKCNLQLSTHLEVPHDKGYNTIQ*DLHPHK Trigger: CTTGTGAGGGTGAAGGTCGCATTGAATGGTGTTGTA...ACCCTTGTCATGAGGAACCTCAAGATGTGTAGAAAGCTGTAGATTGCACTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTGCAATCTACAGCTTTCTACACATCTTGAGGTTCCTCATGACAAGGGTAGTTTAGAAGACTCGTaGACGTTTAAGGCTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKCNLQLSTHLEVPHDKGSLEDS*TFKAGV Trigger: CACTCCAGCCTTAAACGTGCACGAGTCTTCTAAACT...ACCCTTGTCATGAGGAACCTCAAGATGTGTAGAAAGCTGTAGATTGCACTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGAGTTTAGAAGACTCGTaGACGTTTAAGGCTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRPVLGMIHCFLLKQNILSLEDS*TFKAGV Trigger: CACTCCAGCCTTAAACGTGCACGAGTCTTCTAAACT...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGAGGACTAACAGCTCATaGGCTTTCTTGCAGCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SRPVLGMIHCFLLKQNILRTNSS*AFLQQI Trigger: GATTTGCTGCAAGAAAGCCCATGAGCTGTTAGTCCT...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| 3UTR CAA 72 bp | CCAAGTGCTGGGACTAACGGCTTAAGCCCCCATCACTaGGCCCAATTATCATGTTTTGAAATACTAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGTNGLSPHH*AQLSCFEILSY Trigger: ATAACTTAGTATTTCAAAACATGATAATTGGGCCAAGTGATGGGGGCTTAAGCCGTTAGTCCCAGCACTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGTGCAATCTACAGCTTTCTACACATCTTGAGGTTCCTCATGACAAGGGTATCTTTCCTGAGGCTTaGAGCAACTCAGTTATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKCNLQLSTHLEVPHDKGIFPEA*SNSVIK Trigger: CTTTATAACTGAGTTGCTTCAAGCCTCAGGAAAGAT...ACCCTTGTCATGAGGAACCTCAAGATGTGTAGAAAGCTGTAGATTGCACTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTGCAATCTACAGCTTTCTACACATCTTGAGGTTCCTCATGACAAGGGTTGCCAGATTTTTCATTaGAACAGCATATTCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKCNLQLSTHLEVPHDKGCQIFH*NSIFAK Trigger: CTTTGCGAATATGCTGTTGCAATGAAAAATCTGGCA...ACCCTTGTCATGAGGAACCTCAAGATGTGTAGAAAGCTGTAGATTGCACTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCCAGTGTTGGGTATGATACATTGCTTCTTGCTTAAACAGAACATTCTGTTTGGAAGTACTCTCTaGATACACTACAACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: SRPVLGMIHCFLLKQNILFGSTL*IHYNTI Trigger: AATGGTGTTGTAGTGTATGCAGAGAGTACTTCCAAA...CAGAATGTTCTGTTTAAGCAAGAAGCAATGTATCATACCCAACACTGGCCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGAAATTGTGTGAATGTGACAGGAAATTCCTTAAACTATCAATATCCAGGTATCTATAGCATCTTGTaGAAGCTGGAGTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRNCVNVTGNSLNYQYPGIYSIL*KLEWLL Trigger: CAGCAGCCACTCCAGCTTGCACAAGATGCTATAGAT...ACCTGGATATTGATAGTTTAAGGAATTTCCTGTCACATTCACACAATTTCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATAGGAATAGAGCTGGCTTaGCTTTCTCCAGAATCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSQVNILNTKTCISKNVIGIELA*LSPESE Trigger: TTCCGATTCTGGAGAAAGCCAAGCCAGCTCTATTCC...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
||
| CDS-3UTR GCA 90 bp | CACACATACAACACACACATACATACACGCTCATACAACATTAACCATGAAATCTGCCCAGTGATTATCTaGCAGATTTTTCATTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTYNTHIHTRSYNINHEICPVII*QIFHCN Trigger: GTTGCAATGAAAAATCTGGCAGATAATCACTGGGCA...GATTTCATGGTTAATGTTGTATGAGCGTGTATGTATGTGTGTGTTGTATGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATAATCTTTCCTGAGGCTTaGAGCAACTCAGTTATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQVNILNTKTCISKNVIIFPEA*SNSVIK Trigger: CTTTATAACTGAGTTGCTTCAAGCCTCAGGAAAGAT...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
||
| CDS-3UTR TCA 90 bp | CACACATACAACACACACATACATACACGCTCATACAACATTAACCATGAAATCCCTCTTCTACACTGTTaGAATCTTGAGGAATATACA | + |
|
Preference number: 4 (lower is better) Translates to: HTYNTHIHTRSYNINHEIPLLHC*NLEEYT Trigger: TGTATATTCCTCAAGATTTCAACAGTGTAGAAGAGG...GATTTCATGGTTAATGTTGTATGAGCGTGTATGTATGTGTGTGTTGTATGTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS-3UTR GCA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATAATAGGATTTCTCAGCTaGTTCAGAAAAGCATCTATA | + |
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Preference number: 4 (lower is better) Translates to: LSQVNILNTKTCISKNVIIGFLS*FRKASI Trigger: TATAGATGCTTTTCTGAAGCAGCTGAGAAATCCTAT...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS TCA 90 bp | TTATCAAAGTCTCCCACTTCGCGGTACTTCTTGCGGAGCCGCCGATaGACGCTCTTCACCACCCCGGACAGCTTCTCCTGCTCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LSKSPTSRYFLRSRR*TLFTTPDSFSCSSF Trigger: GAAGCTGGAGCAGGAGAAGCTGTCCGGGGTGGTGAAGAGCGTTCATCGGCGGCTCCGCAAGAAGTACCGCGAAGTGGGAGACTTTGATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| CDS-3UTR CAA 90 bp | GTCCCAGAACTTGCTTTGAAGACCAGGCTGGCTGGCCTTGAAGTCATAGCTCTGAGCTCATGGGCTTTCTaGCAGCAAATCCATCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VPELALKTRLAGLEVIALSSWAF*QQIHRW Trigger: CCAGCGATGGATTTGCTGCAAGAAAGCCCATGAGCT...CAGAGCTATGACTTCAAGGCCAGCCAGCCTGGTCTTCAAAGCAAGTTCTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS-3UTR CAA 90 bp | GGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTACACCACCCTCACAAGTTTTaGCCCAGTGATTATCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: GQVRTLSELVTAEYNRLHHPHKF*PSDYLP Trigger: TGGCAGATAATCACTGGGCAAAAACTTGTGAGGGTG...GTGTAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| CDS GCA 90 bp | AAAGCATCTATAGCATCTTGTGCAAGCTGGAGTGGCTGCTGCAGCTaGAGGTTCAGGAAGTCACACTTATACACACTCTCTACAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: KASIASCASWSGCCS*RFRKSHLYTLSTAG Trigger: ACCTGCTGTAGAGAGTGTGTATAAGTGTGACTTCCTGAACCTGCAGCTGCAGCAGCCACTCCAGCTTGCACAAGATGCTATAGATGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS-3UTR CAA 90 bp | CCAAGTGCTGGGACTAACGGCTTAAGCCCCCATCACTTGGCCCAATTATCATGTTCTTTTCCCACCATTTaGGAAGTACTCTCTGCATAC | + |
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Preference number: 5 (lower is better) Translates to: PSAGTNGLSPHHLAQLSCSFPTI*EVLSAY Trigger: GTATGCAGAGAGTACTTCCAAAATGGTGGGAAAAGA...ACATGATAATTGGGCCAAGTGATGGGGGCTTAAGCCGTTAGTCCCAGCACTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS-3UTR CAA 90 bp | AAAGGACAGGTGAGGACCCTCTCAGAGCTGGTCACAGCAGAATATAACCGTTTATCTTTTCCCACCATTTaGGAAGTACTCTCTGCATAC | + |
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Preference number: 5 (lower is better) Translates to: KGQVRTLSELVTAEYNRLSFPTI*EVLSAY Trigger: GTATGCAGAGAGTACTTCCAAAATGGTGGGAAAAGA...TAAACGGTTATATTCTGCTGTGACCAGCTCTGAGAGGGTCCTCACCTGTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| CDS TCA 90 bp | CAACACCATTCAATGCGACCTTCACCCTCACAAGTTTTTGCCCAGTaGTTATCTGCCAGATTTTTCATTGCAACAGCATATTCGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: QHHSMRPSPSQVFAQ*LSARFFIATAYSQS Trigger: ACTTTGCGAATATGCTGTTGCAATGAAAAATCTGGCAGATAATCACTGGGCAAAAACTTGTGAGGGTGAAGGTCGCATTGAATGGTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| CDS-3UTR CAA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATATGGAATAGAGCTGGCTaGGCTTTCTCCAGAATCGGA | + |
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Preference number: 5 (lower is better) Translates to: LSQVNILNTKTCISKNVIWNRAG*AFSRIG Trigger: TCCGATTCTGGAGAAAGCCAAGCCAGCTCTATTCCA...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS-3UTR CAA 90 bp | CTTTCACAGGTAAATATACTGAACACCAAGACCTGTATCAGTAAGAATGTCATACACCCTCACAAGTTTTaGCCCAGTGATTATCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LSQVNILNTKTCISKNVIHPHKF*PSDYLP Trigger: TGGCAGATAATCACTGGGCAAAAACTTGTGAGGGTG...TATGACATTCTTACTGATACAGGTCTTGGTGTTCAGTATATTTACCTGTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| CDS-3UTR CAA 90 bp | CACACATACAACACACACATACATACACGCTCATACAACATTAACCATGAAATCTACACTGTTGAAATCTaGAGGAATATACAACATCCC | + |
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Preference number: 5 (lower is better) Translates to: HTYNTHIHTRSYNINHEIYTVEI*RNIQHP Trigger: GGGATGTTGTATATTCCTCAAGATTTCAACAGTGTA...GATTTCATGGTTAATGTTGTATGAGCGTGTATGTATGTGTGTGTTGTATGTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS TCA 72 bp | TCTCCCACTTCGCGGTACTTCTTGCGGAGCCGCCGATaGACGCTCTTCACCACCCCGGACAGCTTCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPTSRYFLRSRR*TLFTTPDSFSC Trigger: GCAGGAGAAGCTGTCCGGGGTGGTGAAGAGCGTTCATCGGCGGCTCCGCAAGAAGTACCGCGAAGTGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| CDS GCA 72 bp | AGATCTTATCAAAGTCTCCCACTTCGCGGTACTTCTTaGGGAGCCGCCGATGAACGCTCTTCACCACCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RSYQSLPLRGTS*GAADERSSPPR Trigger: CCGGGGTGGTGAAGAGCGTTCATCGGCGGCTCCGCAAGAAGTACCGCGAAGTGGGAGACTTTGATAAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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| CDS GCA 72 bp | ATAGCATCTTGTGCAAGCTGGAGTGGCTGCTGCAGCTaGAGGTTCAGGAAGTCACACTTATACACACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: IASCASWSGCCS*RFRKSHLYTLS Trigger: AGAGAGTGTGTATAAGTGTGACTTCCTGAACCTGCAGCTGCAGCAGCCACTCCAGCTTGCACAAGATGCTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045235.8 |
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| CDS GCA 72 bp | AGGTTTGTTAAAGGACCTTCAAGTTTAGAAGACTCGTaGACGTTTAAGGCTGGAGTGGTCTTAGTGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: RFVKGPSSLEDS*TFKAGVVLVAR Trigger: CCTCGCCACTAAGACCACTCCAGCCTTAAACGTGCACGAGTCTTCTAAACTTGAAGGTCCTTTAACAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045235.8 ENSMUST00000203078.2 |
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